Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0014312

Physical Location & Seq

Genomic Coordinates Forward (+)

59949259 .. 59955753

Gene Structure 6495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G034770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGCAATCTTGCTCTCTTCCTCTGCTTCTGCTTCAATCTTCACATCTTCACCATCCCAATCCCTCAAGCCACTGAACCCACCTCTCCCTTTCTTGATCTCCACCGCTAACCCACATCGAAAACCTTCAGGAAGAGCAAAGAGTTTTTTTCCTTTAAGAGTAGCAACCCAACCTCAGACCACAGACCCAGATCGACCCACCAAAACAGAGCAAGATGGGGAAAGTTACAATCTTGGAGATGAGGTTGAGGATGAAAGCTCAGCAACCAAGTTCAATTGGAGAGATCACTGGTACCCAGTTTCTTTGATTGAAGATTTGGACCCTAAATTGCCTACCCCATTTCAGCTTCTGGGTCGAGACATAGTTTTGTGGTTCGATAGGAACAAACAGGAATGGGTGGCTTTAGATGACAAATGCCCTCACCGCCTCGCGCCATTATCTGAAGGGAGGATTGATGAAGGTGGAAACTTGCAGTGTTCATACCATGGGTGGTCATTTGATGGGTGTGGATCCTGTGTTAAGATTCCACAGGCTTCACCTCAAGGTCCTGAAGCTCGTGCAGTCAGGTCTCCAAGAGCATGTGCCACTAGGTTTCCTACTCTGGTGTCTCAAGGCCTGCTCTTTGTCTGGCCTGATGAGAATGGTTGGGAAAGAGCCAATGCCTCCAAGCCTCCAATGCTACCTGATGAGTTTGGCAAACCTGAGTTTTCGACAGTGACAATCCAGCGTGATCTCTTCTATGGCTATGATACCCTCATGGAAAATGTGTCTGATCCTTCCCACATTGACTTTGCTCATCACAAGGTTACAGGTAGGAGAGACAGAGCTAAGCCTTTGCCATTTAAACTGGAAGATAGTGGCCCTTGGGGCTTTTCTGGTGCAAATGAGGGCAACCCACGGATTACTGCCAAGTTTATAGCGCCTTGTTATTATTTAAATAAAATAGAGATTGATACAAAGCTTCCACTAGTTGGTGATCAAAAATGGGTTATATGGATTTGTTCCTTCAATGTTCCAATGGCACCAGGGAAGACTCGCTCTATTGTTTGTAGTGCTCGAAACTTCTTCCAGTTCAGCATGCCAGGGCCTGCTTGGTGGCAGGTGATTCCTAGATGGCATGAACATTGGACTTCAAATAAGGTGTATGATGGAGACATGATTGTCCTTCAGGGTCAAGAGAAGGTCTTTCTATCCAAGTCAAAGGAGGAATTTGGTGATGTTAATAAGCAGTACACGACAATTACGTTTACACCCACACAAGCAGATCGTTTTGTCTTGGCATTTCGAAATTGGCTGAGGCGACACGGCAACAGCCAACCTGAGTGGTTTGGTACAAGCGACCAGCAACCTTTGCCCTCAACTATCTTATCAAAACGTCAGATGTTGGACAGATTTGAGCAGCACACACTTAAATGTTCATCATGTAAAGGAGCTTATACAGCAATCCAGACATGGAAGAAGTTGCTAATTGGAGCAGCCGTTGTTTTTGCCTCAACGGCCGGGATCCCTTCAGGTCTGCAACTACGGATCAGTTTGGCTGGGTTTGCCCTTGTGAGTGCTGGGTTAGCTTATGCTTTACATGAACTGGAAAAGAATTTTGTTTTTGTTGATTATGTACATGCTGACATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009706 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009941 GO:0009987 GO:0010154 GO:0015994 GO:0015996 GO:0016020 GO:0016491 GO:0016730 GO:0019439 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032441 GO:0032501 GO:0032502 GO:0033013 GO:0033015 GO:0034641 GO:0042170 GO:0042440 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046149 GO:0046483 GO:0046700 GO:0048037 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051186 GO:0051187 GO:0051536 GO:0051540 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0090567 GO:0098542 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00860 ko01110 map00860 map01110

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

544

Amino Acids

61.26

Weight (kDa)

7.19

Isoelectric Point (pI)

44.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	96 - 180	4.6e-24	Rieske [2Fe-2S] domain
PaO	PF08417	305 - 401	4.1e-19	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44880
fragaria_vesca	FvH4_3g30560 FvH4_3g30560 FvH4_3g30560
malus_domestica	MD11G1149200.v1.1
prunus_persica	Prupe.6G113600_v2.0.a1
pyrus_communis	pycom11g12210
rosa_chinensis	RchiOBHm_Chr5g0056561
rosa_laevigata	RLG00000035105
rosa_multiflora	Rmu_sc0000366.1_g000002
rosa_roxburghii	Rroxscaffold_1G00023780
rosa_rugosa	Rorug05G0300800 Rorug05G0300900
rosa_samantha	Rh5BG382300 Rh5CG405500 Rh5DG395300
rosa_wichuraiana	Rw5G034770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1090
AasI	GACNNNNNNGTC	1 cut(s)	1160
Acc36I	ACCTGC	1 cut(s)	1090
Acc65I	GGTACC	1 cut(s)	291
AccB1I	GGYRCC	2 cut(s)	291, 1021
AccB7I	CCANNNNNTGG	1 cut(s)	971
AccII	CGCG	1 cut(s)	431
AciI	CCGC	2 cut(s)	105, 424
AclWI	GGATC	6 cut(s)	504, 517, 767, 1498, 1511, 1535
AcoI	YGGCCR	1 cut(s)	1497
AcsI	RAATTY	2 cut(s)	1208, 1594
AcuI	CTGAAG	5 cut(s)	111, 462, 570, 1151, 1494
AfaI	GTAC	4 cut(s)	293, 1232, 1333, 1617
AfiI	CCNNNNNNNGG	1 cut(s)	971
AgsI	TTSAA	6 cut(s)	36, 274, 311, 1009, 1134, 1631
AhlI	ACTAGT	1 cut(s)	967
AjnI	CCWGG	2 cut(s)	1024, 1081
AluBI	AGCT	7 cut(s)	258, 346, 554, 827, 961, 1433, 1568
AluI	AGCT	7 cut(s)	258, 346, 554, 827, 961, 1433, 1568
Alw21I	GWGCWC	1 cut(s)	1057
Alw26I	GTCTC	5 cut(s)	351, 573, 612, 813, 1146
AlwI	GGATC	6 cut(s)	504, 517, 767, 1498, 1511, 1535
AlwNI	CAGNNNCTG	2 cut(s)	349, 1088
AoxI	GGCC	5 cut(s)	613, 629, 859, 1085, 1497
ApeKI	GCWGC	2 cut(s)	1399, 1475
ApoI	RAATTY	2 cut(s)	1208, 1594
Asp700I	GAANNNNTTC	1 cut(s)	124
Asp718I	GGTACC	1 cut(s)	291
AspLEI	GCGC	2 cut(s)	433, 922
AspS9I	GGNCC	4 cut(s)	319, 545, 860, 1085
AsuC2I	CCSGG	1 cut(s)	1501
AsuHPI	GGTGA	6 cut(s)	42, 413, 528, 986, 1114, 1226
AsuII	TTCGAA	1 cut(s)	1285
AvaII	GGWCC	2 cut(s)	319, 545
BamHI	GGATCC	2 cut(s)	509, 1503
BanI	GGYRCC	2 cut(s)	291, 1021
BauI	CACGAG	1 cut(s)	555
BbsI	GAAGAC	1 cut(s)	1037
Bbv12I	GWGCWC	1 cut(s)	1057
BbvCI	CCTCAGC	1 cut(s)	1295
BbvI	GCAGC	2 cut(s)	1411, 1487
BccI	CCATC	5 cut(s)	61, 209, 494, 1107, 1142
BceAI	ACGGC	3 cut(s)	1321, 1463, 1512
BciT130I	CCWGG	2 cut(s)	1026, 1083
BclI	TGATCA	1 cut(s)	976
BcnI	CCSGG	1 cut(s)	1501
BcoDI	GTCTC	5 cut(s)	351, 573, 612, 813, 1146
BcuI	ACTAGT	1 cut(s)	967
BfaI	CTAG	3 cut(s)	588, 968, 1110
BfoI	RGCGCY	1 cut(s)	923
BfuAI	ACCTGC	1 cut(s)	1090
BglI	GCCNNNNNGGC	2 cut(s)	867, 1496
BisI	GCNGC	2 cut(s)	1400, 1476
BlpI	GCTNAGC	2 cut(s)	259, 828
BlsI	GCNGC	2 cut(s)	1401, 1477
Bme1390I	CCNGG	3 cut(s)	1026, 1083, 1501
Bme18I	GGWCC	2 cut(s)	319, 545
BmgT120I	GGNCC	4 cut(s)	319, 545, 860, 1085
BmiI	GGNNCC	5 cut(s)	293, 321, 511, 1023, 1505
BmrFI	CCNGG	3 cut(s)	1026, 1083, 1501
BmrI	ACTGGG	1 cut(s)	290
BmuI	ACTGGG	1 cut(s)	290
BpiI	GAAGAC	1 cut(s)	1037
Bpu10I	CCTNAGC	1 cut(s)	1295
Bpu1102I	GCTNAGC	2 cut(s)	259, 828
Bpu14I	TTCGAA	1 cut(s)	1285
BpuEI	CTTGAG	3 cut(s)	50, 525, 594
BpuMI	CCSGG	1 cut(s)	1501
BsaI	GGTCTC	1 cut(s)	573
BsaJI	CCNNGG	5 cut(s)	484, 863, 896, 1025, 1082
BsaXI	ACNNNNNCTCC	4 cut(s)	228, 258, 1464, 1494
Bsc4I	CCNNNNNNNGG	1 cut(s)	971
Bse1I	ACTGG	5 cut(s)	293, 296, 852, 1069, 1590
BseBI	CCWGG	2 cut(s)	1026, 1083
BseDI	CCNNGG	5 cut(s)	484, 863, 896, 1025, 1082
BseGI	GGATG	2 cut(s)	53, 256
BseLI	CCNNNNNNNGG	1 cut(s)	971
BseMII	CTCAG	5 cut(s)	188, 273, 693, 1286, 1311
BseNI	ACTGG	5 cut(s)	293, 296, 852, 1069, 1590
BseX3I	CGGCCG	1 cut(s)	1497
BseXI	GCAGC	2 cut(s)	1411, 1487
BseYI	CCCAGC	2 cut(s)	1538, 1559
BsgI	GTGCAG	1 cut(s)	579
Bsh1236I	CGCG	1 cut(s)	431
Bsh1285I	CGRYCG	1 cut(s)	1500
BshFI	GGCC	5 cut(s)	615, 631, 861, 1087, 1499
BshNI	GGYRCC	2 cut(s)	291, 1021
BsiEI	CGRYCG	1 cut(s)	1500
BsiHKAI	GWGCWC	1 cut(s)	1057
BsiSI	CCGG	1 cut(s)	1500
BslI	CCNNNNNNNGG	1 cut(s)	971
BsmAI	GTCTC	5 cut(s)	351, 573, 612, 813, 1146
BsnI	GGCC	5 cut(s)	615, 631, 861, 1087, 1499
Bso31I	GGTCTC	1 cut(s)	573
Bsp119I	TTCGAA	1 cut(s)	1285
Bsp1286I	GDGCHC	1 cut(s)	1057
Bsp1407I	TGTACA	1 cut(s)	1615
Bsp1720I	GCTNAGC	2 cut(s)	259, 828
Bsp19I	CCATGG	1 cut(s)	484
BspACI	CCGC	2 cut(s)	105, 424
BspANI	GGCC	5 cut(s)	615, 631, 861, 1087, 1499
BspCNI	CTCAG	5 cut(s)	187, 272, 694, 1287, 1312
BspFNI	CGCG	1 cut(s)	431
BspLI	GGNNCC	5 cut(s)	293, 321, 511, 1023, 1505
BspMI	ACCTGC	1 cut(s)	1090
BspPI	GGATC	6 cut(s)	504, 517, 767, 1498, 1511, 1535
BspQI	GCTCTTC	1 cut(s)	127
BspT104I	TTCGAA	1 cut(s)	1285
BspT107I	GGYRCC	2 cut(s)	291, 1021
BspTNI	GGTCTC	1 cut(s)	573
BsrGI	TGTACA	1 cut(s)	1615
BsrI	ACTGG	5 cut(s)	293, 296, 852, 1069, 1590
BssECI	CCNNGG	5 cut(s)	484, 863, 896, 1025, 1082
BssSI	CACGAG	1 cut(s)	555
BssT1I	CCWWGG	2 cut(s)	484, 863
Bst2BI	CACGAG	1 cut(s)	555
Bst2UI	CCWGG	2 cut(s)	1026, 1083
Bst4CI	ACNGT	1 cut(s)	715
Bst6I	CTCTTC	3 cut(s)	22, 127, 740
BstAPI	GCANNNNNTGC	1 cut(s)	1351
BstAUI	TGTACA	1 cut(s)	1615
BstBI	TTCGAA	1 cut(s)	1285
BstC8I	GCNNGC	3 cut(s)	617, 1079, 1089
BstDEI	CTNAG	6 cut(s)	174, 259, 702, 828, 1295, 1320
BstDSI	CCRYGG	2 cut(s)	484, 896
BstF5I	GGATG	2 cut(s)	53, 256
BstFNI	CGCG	1 cut(s)	431
BstH2I	RGCGCY	1 cut(s)	923
BstHHI	GCGC	2 cut(s)	433, 922
BstMAI	GTCTC	5 cut(s)	351, 573, 612, 813, 1146
BstMCI	CGRYCG	1 cut(s)	1500
BstMWI	GCNNNNNNNGC	8 cut(s)	423, 676, 867, 1351, 1439, 1496, 1544, 1565
BstNI	CCWGG	2 cut(s)	1026, 1083
BstNSI	RCATGY	3 cut(s)	582, 1081, 1622
BstSCI	CCNGG	3 cut(s)	1024, 1081, 1499
BstUI	CGCG	1 cut(s)	431
BstV1I	GCAGC	2 cut(s)	1411, 1487
BstV2I	GAAGAC	1 cut(s)	1037
BstX2I	RGATCY	2 cut(s)	509, 1503
BstYI	RGATCY	2 cut(s)	509, 1503
BstZI	CGGCCG	1 cut(s)	1497
BsuRI	GGCC	5 cut(s)	615, 631, 861, 1087, 1499
BtgI	CCRYGG	2 cut(s)	484, 896
BtsCI	GGATG	2 cut(s)	53, 256
BtsI	GCAGTG	1 cut(s)	479
BtsIMutI	CAGTG	4 cut(s)	71, 286, 479, 720
BveI	ACCTGC	1 cut(s)	1090
Cac8I	GCNNGC	3 cut(s)	617, 1079, 1089
CaiI	CAGNNNCTG	2 cut(s)	349, 1088
CfoI	GCGC	2 cut(s)	433, 922
Cfr13I	GGNCC	4 cut(s)	319, 545, 860, 1085
Csp6I	GTAC	4 cut(s)	292, 1231, 1332, 1616
CspCI	CAANNNNNGTGG	2 cut(s)	1304, 1339
CviQI	GTAC	4 cut(s)	292, 1231, 1332, 1616
DdeI	CTNAG	6 cut(s)	174, 259, 702, 828, 1295, 1320
DraI	TTTAAA	2 cut(s)	844, 936
DrdI	GACNNNNNNGTC	1 cut(s)	1160
DseDI	GACNNNNNNGTC	1 cut(s)	1160
EaeI	YGGCCR	1 cut(s)	1497
EagI	CGGCCG	1 cut(s)	1497
Eam1104I	CTCTTC	3 cut(s)	22, 127, 740
EarI	CTCTTC	3 cut(s)	22, 127, 740
EclXI	CGGCCG	1 cut(s)	1497
Eco130I	CCWWGG	2 cut(s)	484, 863
Eco147I	AGGCCT	1 cut(s)	615
Eco31I	GGTCTC	1 cut(s)	573
Eco47I	GGWCC	2 cut(s)	319, 545
Eco52I	CGGCCG	1 cut(s)	1497
Eco57I	CTGAAG	5 cut(s)	111, 462, 570, 1151, 1494
EcoO109I	RGGNCCY	2 cut(s)	545, 1085
EcoRII	CCWGG	2 cut(s)	1024, 1081
EcoT14I	CCWWGG	2 cut(s)	484, 863
ErhI	CCWWGG	2 cut(s)	484, 863
FbaI	TGATCA	1 cut(s)	976
Fnu4HI	GCNGC	2 cut(s)	1400, 1476
FokI	GGATG	2 cut(s)	40, 263
Fsp4HI	GCNGC	2 cut(s)	1400, 1476
FspBI	CTAG	3 cut(s)	588, 968, 1110
GlaI	GCGC	2 cut(s)	432, 921
GluI	GCNGC	2 cut(s)	1400, 1476
GsaI	CCCAGC	2 cut(s)	1542, 1563
HaeII	RGCGCY	1 cut(s)	923
HaeIII	GGCC	5 cut(s)	615, 631, 861, 1087, 1499
HapII	CCGG	1 cut(s)	1500
HhaI	GCGC	2 cut(s)	433, 922
Hin6I	GCGC	2 cut(s)	431, 920
HinP1I	GCGC	2 cut(s)	431, 920
HindIII	AAGCTT	1 cut(s)	959
HinfI	GANTC	3 cut(s)	523, 1033, 1105
HpaII	CCGG	1 cut(s)	1500
HphI	GGTGA	6 cut(s)	42, 413, 528, 986, 1114, 1226
Hpy166II	GTNNAC	2 cut(s)	1233, 1248
Hpy188I	TCNGA	4 cut(s)	177, 442, 772, 1380
Hpy188III	TCNNGA	6 cut(s)	94, 129, 356, 548, 1175, 1447
Hpy8I	GTNNAC	2 cut(s)	1233, 1248
HpyAV	CCTTC	8 cut(s)	135, 437, 452, 786, 1015, 1174, 1175, 1518
HpyCH4III	ACNGT	1 cut(s)	715
HpyCH4IV	ACGT	2 cut(s)	1244, 1375
HpyCH4V	TGCA	4 cut(s)	472, 560, 881, 1519
HpyF10VI	GCNNNNNNNGC	8 cut(s)	423, 676, 867, 1351, 1439, 1496, 1544, 1565
HpyF3I	CTNAG	6 cut(s)	174, 259, 702, 828, 1295, 1320
HpySE526I	ACGT	2 cut(s)	1244, 1375
HspAI	GCGC	2 cut(s)	431, 920
KpnI	GGTACC	1 cut(s)	295
Ksp22I	TGATCA	1 cut(s)	976
LguI	GCTCTTC	1 cut(s)	127
LmnI	GCTCC	2 cut(s)	1430, 1472
Lsp1109I	GCAGC	2 cut(s)	1411, 1487
MaeI	CTAG	3 cut(s)	588, 968, 1110
MaeII	ACGT	2 cut(s)	1244, 1375
MaeIII	GTNAC	3 cut(s)	224, 715, 805
MfeI	CAATTG	1 cut(s)	274
MflI	RGATCY	2 cut(s)	509, 1503
MhlI	GDGCHC	1 cut(s)	1057
MluCI	AATT	7 cut(s)	274, 326, 1208, 1239, 1288, 1467, 1594
MlyI	GAGTC	1 cut(s)	1027
MmeI	TCCRAC	1 cut(s)	1365
MroXI	GAANNNNTTC	1 cut(s)	124
MseI	TTAA	6 cut(s)	155, 519, 843, 935, 1221, 1410
MslI	CAYNNNNRTG	1 cut(s)	1411
MspI	CCGG	1 cut(s)	1500
MspR9I	CCNGG	3 cut(s)	1026, 1083, 1501
MunI	CAATTG	1 cut(s)	274
MvaI	CCWGG	2 cut(s)	1026, 1083
MvnI	CGCG	1 cut(s)	431
MwoI	GCNNNNNNNGC	8 cut(s)	423, 676, 867, 1351, 1439, 1496, 1544, 1565
NciI	CCSGG	1 cut(s)	1501
NcoI	CCATGG	1 cut(s)	484
NlaIV	GGNNCC	5 cut(s)	293, 321, 511, 1023, 1505
NmuCI	GTSAC	1 cut(s)	715
NspI	RCATGY	3 cut(s)	582, 1081, 1622
NspV	TTCGAA	1 cut(s)	1285
PaeI	GCATGC	1 cut(s)	1081
PaqCI	CACCTGC	1 cut(s)	1090
PceI	AGGCCT	1 cut(s)	615
PciSI	GCTCTTC	1 cut(s)	127
PcsI	WCGNNNNNNNCGW	1 cut(s)	1241
PdmI	GAANNNNTTC	1 cut(s)	124
PfeI	GAWTC	2 cut(s)	523, 1105
PflMI	CCANNNNNTGG	1 cut(s)	971
PkrI	GCNGC	2 cut(s)	1401, 1477
PleI	GAGTC	1 cut(s)	1027
PpsI	GAGTC	1 cut(s)	1027
PpuMI	RGGWCCY	1 cut(s)	545
Psp5II	RGGWCCY	1 cut(s)	545
Psp6I	CCWGG	2 cut(s)	1024, 1081
PspFI	CCCAGC	2 cut(s)	1538, 1559
PspGI	CCWGG	2 cut(s)	1024, 1081
PspN4I	GGNNCC	5 cut(s)	293, 321, 511, 1023, 1505
PspPI	GGNCC	4 cut(s)	319, 545, 860, 1085
PspPPI	RGGWCCY	1 cut(s)	545
PstNI	CAGNNNCTG	2 cut(s)	349, 1088
PsuI	RGATCY	2 cut(s)	509, 1503
RsaI	GTAC	4 cut(s)	293, 1232, 1333, 1617
RsaNI	GTAC	4 cut(s)	292, 1231, 1332, 1616
RseI	CAYNNNNRTG	1 cut(s)	1411
SapI	GCTCTTC	1 cut(s)	127
SaqAI	TTAA	6 cut(s)	155, 519, 843, 935, 1221, 1410
SatI	GCNGC	2 cut(s)	1400, 1476
Sau96I	GGNCC	4 cut(s)	319, 545, 860, 1085
SchI	GAGTC	1 cut(s)	1027
ScrFI	CCNGG	3 cut(s)	1026, 1083, 1501
SduI	GDGCHC	1 cut(s)	1057
SfuI	TTCGAA	1 cut(s)	1285
SinI	GGWCC	2 cut(s)	319, 545
SmiI	ATTTAAAT	1 cut(s)	936
SmiMI	CAYNNNNRTG	1 cut(s)	1411
SmlI	CTYRAG	3 cut(s)	65, 540, 609
SmoI	CTYRAG	3 cut(s)	65, 540, 609
SpeI	ACTAGT	1 cut(s)	967
SphI	GCATGC	1 cut(s)	1081
Sse9I	AATT	7 cut(s)	274, 326, 1208, 1239, 1288, 1467, 1594
SseBI	AGGCCT	1 cut(s)	615
SsiI	CCGC	2 cut(s)	105, 424
SspMI	CTAG	3 cut(s)	588, 968, 1110
StuI	AGGCCT	1 cut(s)	615
StyD4I	CCNGG	3 cut(s)	1024, 1081, 1499
StyI	CCWWGG	2 cut(s)	484, 863
SwaI	ATTTAAAT	1 cut(s)	936
TaaI	ACNGT	1 cut(s)	715
TaiI	ACGT	2 cut(s)	1247, 1378
TaqI	TCGA	7 cut(s)	118, 193, 355, 375, 710, 1057, 1285
TasI	AATT	7 cut(s)	274, 326, 1208, 1239, 1288, 1467, 1594
TatI	WGTACW	2 cut(s)	1230, 1615
TfiI	GAWTC	2 cut(s)	523, 1105
Tru1I	TTAA	6 cut(s)	155, 519, 843, 935, 1221, 1410
Tru9I	TTAA	6 cut(s)	155, 519, 843, 935, 1221, 1410
TscAI	CASTG	4 cut(s)	78, 293, 479, 720
TseFI	GTSAC	1 cut(s)	715
TseI	GCWGC	2 cut(s)	1399, 1475
Tsp45I	GTSAC	1 cut(s)	715
TspDTI	ATGAA	6 cut(s)	267, 468, 471, 1134, 1407, 1596
TspGWI	ACGGA	2 cut(s)	913, 1540
TspRI	CASTG	4 cut(s)	78, 293, 479, 720
Van91I	CCANNNNNTGG	1 cut(s)	971
VpaK11BI	GGWCC	2 cut(s)	319, 545
XapI	RAATTY	2 cut(s)	1208, 1594
XceI	RCATGY	3 cut(s)	582, 1081, 1622
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1089
XmnI	GAANNNNTTC	1 cut(s)	124
XspI	CTAG	3 cut(s)	588, 968, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.