Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0008853

Physical Location & Seq

Genomic Coordinates Forward (+)

30029219 .. 30032906

Gene Structure 3688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1205500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGAAAAAGATGGAACCAGATCATGGGAAGCTCTTCATTGGTGGGATTTCCTGGGACACAGATGAGGAACGGCTCAAGGAATATTTCAGGAAGTATGGAGAGGTGGTGGAGGCTGTGATCATGAGGGATCGTGCAACCGGTCGTGCTCGTGGATTCGGGTTTGTTGTCTTTGCGGATCCTGCGGTTGCAGAAAGAGTTGTCATGGATAAGCACATGATCGATTGCCGCACAGTGGAAGCAAAGAAGGCTGTTCCAAAGGAGGATCAGCACATTTTAAACAGAACCGGGGTTGTCAATGGTTCCCCGGGTCCTGGACGCACAAAAAAGATTTTTGTTGGAGGTTTAGCATCCACAGTGACCGAGAGTGACTTTAAGAAGTACTTTGATCAATTTGGTACAGTCACTGATGTTGTAGTAATGTATGATCACAACACTCAAAGGCCAAGAGGCTTCGGATTTATCACTTATGACTCGGAGGAGGCTGTTGACAGAGTTCTGCATAAAACATTTCATGAACTCAATGGTAAGATGGTTGAGGTCAAGAGGGCAGTCCCTAAGGAGCTATCCCCAGGACCCAGCCGGAGCCCTATGATAGGATACAACTATAGTCCGGGTAGGACCAATAGTTTGCTTAACAGCTATGCTCAGGGTTATAATACGAGCCCAATCGGAGGTTTTGGCATTAATGTGGACACCAGGTTCAATCCAATCTCTAGTGGTCGTAGCGGGTTGTCTCCATTTGGCACTTCTGGATATGGAATAGGTATGAATATGGAGCCAGGGTTGAGCCCAACCTATGGCGGAAATTCCAACTTTGTCAGTAGTCTAGGATATGCACGGATGTTGAGCCCCTTTTATAGTGGCAATTCAAACAGGTATAGTACCCCTATTGGATATAATGCCGGTAATGGAAGGAGAAGTCCTGTAGTAAACTCAACTACTCGGAATGTCTGGCGAAATAGTGGCATCAACAATAACTCAAACCCTGCCAGTACCGGGGCCTGCTTGAGCTCTGCAAATGGAGGTTTTGAAGTTACGATTGGAAACAATGGTTCAAATTGGGGCGCTAATTCTTTTTCAACTGAAGGTAGAGGCAGTGATTCTGGCTATAATAGTGCCAATGGTTATGGAAGTGGAGGTAGCAGCTTTGGGTTGGGAGGAGGAGGATATGGAAGAAACGGTGGCACTGGTATAGCCCCAACTTCATCATTTCCCGGATCAACTGTTGGTTATGAGGGCTTTTATGGGGACTTGTACCAGAACGGTTCAGTTTATGGCGACTCAACTTGGCGCTCAAGCAGTCCTGATCTAGATGGTTCTAGCACATTCGGTTATGGGCTGAGCGATTTACCTGCAGACATCACAGCCAAAAGTTCTGGTGGCTATATTGGAGGTTACAACGTTACCAGTACACAACCAAATAGAGGAGTTGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005844 GO:0008150 GO:0008187 GO:0008266 GO:0009987 GO:0030154 GO:0032502 GO:0032991 GO:0044424 GO:0044464 GO:0048468 GO:0048856 GO:0048863 GO:0048864 GO:0048869 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

480

Amino Acids

50.92

Weight (kDa)

8.89

Isoelectric Point (pI)

34.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	11 - 68	2.5e-16	RNA recognition motif
RRM_7	PF16367	108 - 179	1.1e-06	RNA recognition motif
RRM_1	PF00076	110 - 167	2.7e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008853)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g23960 FvH4_3g23960 FvH4_3g23960
malus_domestica	MD03G1189400.v1.1 MD11G1205500.v1.1
prunus_persica	Prupe.4G231900_v2.0.a1 Prupe.4G231900_v2.0.a1 Prupe.4G231900_v2.0.a1 Prupe.4G231900_v2.0.a1 Prupe.4G231900_v2.0.a1
pyrus_communis	pycom03g14230 pycom11g17830
rosa_chinensis	RchiOBHm_Chr5g0042461
rosa_laevigata	RLG00000034128
rosa_multiflora	Rmu_sc0002779.1_g000004
rosa_roxburghii	Rroxscaffold_1G00038230
rosa_rugosa	Rorug05G0200400 Rorug05G0200500
rosa_samantha	Rh5AG286600 Rh5BG291200 Rh5CG323300 Rh5DG300900
rosa_wichuraiana	Rw5G026620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	654
Acc36I	ACCTGC	1 cut(s)	1360
AccB7I	CCANNNNNTGG	2 cut(s)	23, 797
AciI	CCGC	5 cut(s)	173, 182, 226, 726, 801
AclI	AACGTT	1 cut(s)	1401
AclWI	GGATC	5 cut(s)	135, 170, 183, 270, 1225
AcsI	RAATTY	1 cut(s)	805
AcuI	CTGAAG	1 cut(s)	1104
AfaI	GTAC	6 cut(s)	380, 397, 883, 994, 1256, 1411
AfiI	CCNNNNNNNGG	8 cut(s)	23, 232, 311, 593, 671, 797, 996, 1424
AgeI	ACCGGT	1 cut(s)	137
AgsI	TTSAA	5 cut(s)	703, 870, 1031, 1056, 1080
AjnI	CCWGG	5 cut(s)	50, 310, 568, 695, 778
AjuI	GAANNNNNNNTTGG	2 cut(s)	1023, 1055
AloI	GAACNNNNNNTCC	2 cut(s)	683, 715
AluBI	AGCT	5 cut(s)	31, 562, 639, 1011, 1146
AluI	AGCT	5 cut(s)	31, 562, 639, 1011, 1146
Alw21I	GWGCWC	2 cut(s)	148, 1013
Alw26I	GTCTC	1 cut(s)	738
AlwI	GGATC	5 cut(s)	135, 170, 183, 270, 1225
AlwNI	CAGNNNCTG	1 cut(s)	404
Ama87I	CYCGRG	1 cut(s)	304
AoxI	GGCC	2 cut(s)	440, 999
ApeKI	GCWGC	2 cut(s)	1143, 1433
ApoI	RAATTY	1 cut(s)	805
ArsI	GACNNNNNNTTYG	2 cut(s)	610, 642
AseI	ATTAAT	1 cut(s)	684
AsiGI	ACCGGT	1 cut(s)	137
Asp700I	GAANNNNTTC	1 cut(s)	32
AspLEI	GCGC	2 cut(s)	1067, 1293
AspS9I	GGNCC	4 cut(s)	308, 572, 618, 999
AsuC2I	CCSGG	6 cut(s)	286, 305, 306, 612, 997, 1215
AvaI	CYCGRG	1 cut(s)	304
AvaII	GGWCC	3 cut(s)	308, 572, 618
AxyI	CCTNAGG	1 cut(s)	555
BamHI	GGATCC	1 cut(s)	175
BanII	GRGCYC	5 cut(s)	587, 665, 791, 851, 1013
BauI	CACGAG	1 cut(s)	147
Bbv12I	GWGCWC	2 cut(s)	148, 1013
BbvI	GCAGC	2 cut(s)	1155, 1420
BccI	CCATC	3 cut(s)	4, 523, 1307
BceAI	ACGGC	1 cut(s)	86
BcgI	CGANNNNNNTGC	2 cut(s)	1334, 1368
BciT130I	CCWGG	5 cut(s)	52, 312, 570, 697, 780
BciVI	GTATCC	1 cut(s)	590
BclI	TGATCA	3 cut(s)	117, 385, 424
BcnI	CCSGG	6 cut(s)	286, 305, 306, 612, 997, 1215
BcoDI	GTCTC	1 cut(s)	738
BfaI	CTAG	4 cut(s)	714, 827, 1310, 1320
BfmI	CTRYAG	3 cut(s)	604, 924, 1353
BfoI	RGCGCY	2 cut(s)	1068, 1294
BfuAI	ACCTGC	1 cut(s)	1360
BfuI	GTATCC	1 cut(s)	590
BisI	GCNGC	3 cut(s)	226, 1144, 1434
BlpI	GCTNAGC	1 cut(s)	1340
BlsI	GCNGC	3 cut(s)	227, 1145, 1435
BmcAI	AGTACT	1 cut(s)	380
Bme18I	GGWCC	3 cut(s)	308, 572, 618
BmeT110I	CYCGRG	1 cut(s)	304
BmgT120I	GGNCC	4 cut(s)	308, 572, 618, 999
BmiI	GGNNCC	8 cut(s)	15, 177, 301, 309, 574, 584, 777, 1000
BmsI	GCATC	2 cut(s)	356, 975
Bpu10I	CCTNAGC	1 cut(s)	645
Bpu1102I	GCTNAGC	1 cut(s)	1340
BpuEI	CTTGAG	3 cut(s)	59, 1027, 1279
BpuMI	CCSGG	6 cut(s)	286, 305, 306, 612, 997, 1215
Bsa29I	ATCGAT	1 cut(s)	219
BsaJI	CCNNGG	7 cut(s)	51, 285, 303, 304, 568, 779, 996
BsaWI	WCCGGW	1 cut(s)	137
BsaXI	ACNNNNNCTCC	4 cut(s)	90, 120, 767, 797
Bsc4I	CCNNNNNNNGG	8 cut(s)	23, 232, 311, 593, 671, 797, 996, 1424
Bse118I	RCCGGY	2 cut(s)	137, 902
Bse1I	ACTGG	3 cut(s)	990, 1192, 1407
Bse21I	CCTNAGG	1 cut(s)	555
BseBI	CCWGG	5 cut(s)	52, 312, 570, 697, 780
BseCI	ATCGAT	1 cut(s)	219
BseDI	CCNNGG	7 cut(s)	51, 285, 303, 304, 568, 779, 996
BseGI	GGATG	2 cut(s)	347, 846
BseLI	CCNNNNNNNGG	8 cut(s)	23, 232, 311, 593, 671, 797, 996, 1424
BseMII	CTCAG	2 cut(s)	659, 1331
BseNI	ACTGG	3 cut(s)	990, 1192, 1407
BseRI	GAGGAG	4 cut(s)	491, 1173, 1176, 1440
BseXI	GCAGC	2 cut(s)	1155, 1420
BseYI	CCCAGC	1 cut(s)	575
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	2 cut(s)	442, 1001
BshTI	ACCGGT	1 cut(s)	137
BshVI	ATCGAT	1 cut(s)	219
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	148, 1013
BsiHKCI	CYCGRG	1 cut(s)	304
BsiSI	CCGG	8 cut(s)	138, 285, 305, 580, 611, 903, 996, 1215
BslFI	GGGAC	3 cut(s)	68, 536, 1262
BslI	CCNNNNNNNGG	8 cut(s)	23, 232, 311, 593, 671, 797, 996, 1424
BsmAI	GTCTC	1 cut(s)	738
BsmFI	GGGAC	3 cut(s)	68, 536, 1262
BsnI	GGCC	2 cut(s)	442, 1001
BsoBI	CYCGRG	1 cut(s)	304
Bsp1286I	GDGCHC	6 cut(s)	148, 587, 665, 791, 851, 1013
Bsp1720I	GCTNAGC	1 cut(s)	1340
BspACI	CCGC	5 cut(s)	173, 182, 226, 726, 801
BspANI	GGCC	2 cut(s)	442, 1001
BspCNI	CTCAG	2 cut(s)	658, 1332
BspDI	ATCGAT	1 cut(s)	219
BspHI	TCATGA	2 cut(s)	120, 511
BspLI	GGNNCC	8 cut(s)	15, 177, 301, 309, 574, 584, 777, 1000
BspMAI	CTGCAG	1 cut(s)	1357
BspMI	ACCTGC	1 cut(s)	1360
BspPI	GGATC	5 cut(s)	135, 170, 183, 270, 1225
BspQI	GCTCTTC	1 cut(s)	38
BsrFI	RCCGGY	2 cut(s)	137, 902
BsrI	ACTGG	3 cut(s)	990, 1192, 1407
BssAI	RCCGGY	2 cut(s)	137, 902
BssECI	CCNNGG	7 cut(s)	51, 285, 303, 304, 568, 779, 996
BssSI	CACGAG	1 cut(s)	147
Bst2BI	CACGAG	1 cut(s)	147
Bst2UI	CCWGG	5 cut(s)	52, 312, 570, 697, 780
Bst4CI	ACNGT	6 cut(s)	232, 355, 400, 1181, 1225, 1265
Bst6I	CTCTTC	1 cut(s)	38
BstC8I	GCNNGC	1 cut(s)	1003
BstDEI	CTNAG	4 cut(s)	555, 645, 1340, 1437
BstENI	CCTNNNNNAGG	1 cut(s)	591
BstF5I	GGATG	2 cut(s)	347, 846
BstH2I	RGCGCY	2 cut(s)	1068, 1294
BstHHI	GCGC	2 cut(s)	1067, 1293
BstMAI	GTCTC	1 cut(s)	738
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	2 cut(s)	179, 245
BstNI	CCWGG	5 cut(s)	52, 312, 570, 697, 780
BstSFI	CTRYAG	3 cut(s)	604, 924, 1353
BstV1I	GCAGC	2 cut(s)	1155, 1420
BstX2I	RGATCY	1 cut(s)	175
BstYI	RGATCY	1 cut(s)	175
Bsu15I	ATCGAT	1 cut(s)	219
Bsu36I	CCTNAGG	1 cut(s)	555
BsuI	GTATCC	1 cut(s)	590
BsuRI	GGCC	2 cut(s)	442, 1001
BsuTUI	ATCGAT	1 cut(s)	219
BtsCI	GGATG	2 cut(s)	347, 846
BtsI	GCAGTG	1 cut(s)	1102
BtsIMutI	CAGTG	5 cut(s)	237, 360, 402, 1102, 1185
BveI	ACCTGC	1 cut(s)	1360
Cac8I	GCNNGC	1 cut(s)	1003
CaiI	CAGNNNCTG	1 cut(s)	404
CciI	TCATGA	2 cut(s)	120, 511
CfoI	GCGC	2 cut(s)	1067, 1293
Cfr10I	RCCGGY	2 cut(s)	137, 902
Cfr13I	GGNCC	4 cut(s)	308, 572, 618, 999
Cfr9I	CCCGGG	1 cut(s)	304
ClaI	ATCGAT	1 cut(s)	219
CseI	GACGC	1 cut(s)	324
CsiI	ACCWGGT	1 cut(s)	695
Csp6I	GTAC	6 cut(s)	379, 396, 882, 993, 1255, 1410
CspAI	ACCGGT	1 cut(s)	137
CviAII	CATG	5 cut(s)	23, 121, 202, 214, 512
CviQI	GTAC	6 cut(s)	379, 396, 882, 993, 1255, 1410
DdeI	CTNAG	4 cut(s)	555, 645, 1340, 1437
DraI	TTTAAA	1 cut(s)	276
Eam1104I	CTCTTC	1 cut(s)	38
EarI	CTCTTC	1 cut(s)	38
EciI	GGCGGA	1 cut(s)	816
Ecl136II	GAGCTC	1 cut(s)	1011
Eco24I	GRGCYC	5 cut(s)	587, 665, 791, 851, 1013
Eco47I	GGWCC	3 cut(s)	308, 572, 618
Eco53kI	GAGCTC	1 cut(s)	1011
Eco57I	CTGAAG	1 cut(s)	1104
Eco81I	CCTNAGG	1 cut(s)	555
Eco88I	CYCGRG	1 cut(s)	304
EcoICRI	GAGCTC	1 cut(s)	1011
EcoNI	CCTNNNNNAGG	1 cut(s)	591
EcoO109I	RGGNCCY	3 cut(s)	308, 572, 999
EcoRII	CCWGG	5 cut(s)	50, 310, 568, 695, 778
EcoT38I	GRGCYC	5 cut(s)	587, 665, 791, 851, 1013
FaeI	CATG	5 cut(s)	26, 124, 205, 217, 515
FalI	AAGNNNNNCTT	2 cut(s)	365, 397
FaqI	GGGAC	3 cut(s)	68, 536, 1262
FatI	CATG	5 cut(s)	22, 120, 201, 213, 511
FauI	CCCGC	1 cut(s)	719
FbaI	TGATCA	3 cut(s)	117, 385, 424
Fnu4HI	GCNGC	3 cut(s)	226, 1144, 1434
FokI	GGATG	2 cut(s)	334, 853
FriOI	GRGCYC	5 cut(s)	587, 665, 791, 851, 1013
Fsp4HI	GCNGC	3 cut(s)	226, 1144, 1434
FspBI	CTAG	4 cut(s)	714, 827, 1310, 1320
GlaI	GCGC	2 cut(s)	1066, 1292
GluI	GCNGC	3 cut(s)	226, 1144, 1434
GsaI	CCCAGC	1 cut(s)	579
HaeII	RGCGCY	2 cut(s)	1068, 1294
HaeIII	GGCC	2 cut(s)	442, 1001
HapII	CCGG	8 cut(s)	138, 285, 305, 580, 611, 903, 996, 1215
HgaI	GACGC	1 cut(s)	324
HhaI	GCGC	2 cut(s)	1067, 1293
Hin1II	CATG	5 cut(s)	26, 124, 205, 217, 515
Hin6I	GCGC	2 cut(s)	1065, 1291
HinP1I	GCGC	2 cut(s)	1065, 1291
HincII	GTYRAC	1 cut(s)	487
HindII	GTYRAC	1 cut(s)	487
HinfI	GANTC	4 cut(s)	153, 470, 1100, 1280
HpaII	CCGG	8 cut(s)	138, 285, 305, 580, 611, 903, 996, 1215
Hpy166II	GTNNAC	4 cut(s)	487, 691, 931, 1412
Hpy188I	TCNGA	4 cut(s)	455, 475, 671, 945
Hpy188III	TCNNGA	7 cut(s)	88, 121, 512, 541, 750, 1304, 1310
Hpy8I	GTNNAC	4 cut(s)	487, 691, 931, 1412
HpyAV	CCTTC	3 cut(s)	238, 906, 1079
HpyCH4III	ACNGT	6 cut(s)	232, 355, 400, 1181, 1225, 1265
HpyCH4IV	ACGT	1 cut(s)	1401
HpyCH4V	TGCA	6 cut(s)	134, 188, 499, 836, 1016, 1355
HpyF10VI	GCNNNNNNNGC	2 cut(s)	179, 245
HpyF3I	CTNAG	4 cut(s)	555, 645, 1340, 1437
HpySE526I	ACGT	1 cut(s)	1401
Hsp92II	CATG	5 cut(s)	26, 124, 205, 217, 515
HspAI	GCGC	2 cut(s)	1065, 1291
Ksp22I	TGATCA	3 cut(s)	117, 385, 424
LguI	GCTCTTC	1 cut(s)	38
LmnI	GCTCC	3 cut(s)	559, 582, 775
Lsp1109I	GCAGC	2 cut(s)	1155, 1420
LweI	GCATC	2 cut(s)	356, 975
MabI	ACCWGGT	1 cut(s)	695
MaeI	CTAG	4 cut(s)	714, 827, 1310, 1320
MaeII	ACGT	1 cut(s)	1401
MaeIII	GTNAC	6 cut(s)	355, 365, 400, 1033, 1394, 1402
MboII	GAAGA	2 cut(s)	25, 1185
MflI	RGATCY	1 cut(s)	175
MhlI	GDGCHC	6 cut(s)	148, 587, 665, 791, 851, 1013
MluCI	AATT	5 cut(s)	389, 805, 865, 1057, 1069
MlyI	GAGTC	2 cut(s)	464, 1274
MmeI	TCCRAC	2 cut(s)	316, 834
MroXI	GAANNNNTTC	1 cut(s)	32
MseI	TTAA	4 cut(s)	275, 372, 633, 684
MslI	CAYNNNNRTG	1 cut(s)	686
MspI	CCGG	8 cut(s)	138, 285, 305, 580, 611, 903, 996, 1215
MvaI	CCWGG	5 cut(s)	52, 312, 570, 697, 780
MwoI	GCNNNNNNNGC	2 cut(s)	179, 245
NciI	CCSGG	6 cut(s)	286, 305, 306, 612, 997, 1215
NlaIII	CATG	5 cut(s)	26, 124, 205, 217, 515
NlaIV	GGNNCC	8 cut(s)	15, 177, 301, 309, 574, 584, 777, 1000
NmuCI	GTSAC	3 cut(s)	355, 365, 400
PagI	TCATGA	2 cut(s)	120, 511
PciSI	GCTCTTC	1 cut(s)	38
PdmI	GAANNNNTTC	1 cut(s)	32
PfeI	GAWTC	2 cut(s)	153, 1100
PflMI	CCANNNNNTGG	2 cut(s)	23, 797
PfoI	TCCNGGA	2 cut(s)	310, 1213
PinAI	ACCGGT	1 cut(s)	137
PkrI	GCNGC	3 cut(s)	227, 1145, 1435
PleI	GAGTC	2 cut(s)	464, 1274
PpsI	GAGTC	2 cut(s)	464, 1274
PpuMI	RGGWCCY	2 cut(s)	308, 572
PshBI	ATTAAT	1 cut(s)	684
PsiI	TTATAA	1 cut(s)	654
Psp124BI	GAGCTC	1 cut(s)	1013
Psp1406I	AACGTT	1 cut(s)	1401
Psp5II	RGGWCCY	2 cut(s)	308, 572
Psp6I	CCWGG	5 cut(s)	50, 310, 568, 695, 778
PspFI	CCCAGC	1 cut(s)	575
PspGI	CCWGG	5 cut(s)	50, 310, 568, 695, 778
PspN4I	GGNNCC	8 cut(s)	15, 177, 301, 309, 574, 584, 777, 1000
PspPI	GGNCC	4 cut(s)	308, 572, 618, 999
PspPPI	RGGWCCY	2 cut(s)	308, 572
PstI	CTGCAG	1 cut(s)	1357
PstNI	CAGNNNCTG	1 cut(s)	404
PsuI	RGATCY	1 cut(s)	175
RsaI	GTAC	6 cut(s)	380, 397, 883, 994, 1256, 1411
RsaNI	GTAC	6 cut(s)	379, 396, 882, 993, 1255, 1410
RseI	CAYNNNNRTG	1 cut(s)	686
SacI	GAGCTC	1 cut(s)	1013
SapI	GCTCTTC	1 cut(s)	38
SaqAI	TTAA	4 cut(s)	275, 372, 633, 684
SatI	GCNGC	3 cut(s)	226, 1144, 1434
Sau96I	GGNCC	4 cut(s)	308, 572, 618, 999
ScaI	AGTACT	1 cut(s)	380
SchI	GAGTC	2 cut(s)	464, 1274
SduI	GDGCHC	6 cut(s)	148, 587, 665, 791, 851, 1013
SexAI	ACCWGGT	1 cut(s)	695
SfaNI	GCATC	2 cut(s)	356, 975
SfcI	CTRYAG	3 cut(s)	604, 924, 1353
SinI	GGWCC	3 cut(s)	308, 572, 618
SmaI	CCCGGG	1 cut(s)	306
SmiMI	CAYNNNNRTG	1 cut(s)	686
SmlI	CTYRAG	3 cut(s)	74, 1006, 1294
SmoI	CTYRAG	3 cut(s)	74, 1006, 1294
Sse9I	AATT	5 cut(s)	389, 805, 865, 1057, 1069
SsiI	CCGC	5 cut(s)	173, 182, 226, 726, 801
SspI	AATATT	1 cut(s)	83
SspMI	CTAG	4 cut(s)	714, 827, 1310, 1320
SstI	GAGCTC	1 cut(s)	1013
TaaI	ACNGT	6 cut(s)	232, 355, 400, 1181, 1225, 1265
TaiI	ACGT	1 cut(s)	1404
TaqI	TCGA	1 cut(s)	219
TaqII	GACCGA	1 cut(s)	374
TasI	AATT	5 cut(s)	389, 805, 865, 1057, 1069
TatI	WGTACW	2 cut(s)	378, 1409
TauI	GCSGC	1 cut(s)	228
TfiI	GAWTC	2 cut(s)	153, 1100
Tru1I	TTAA	4 cut(s)	275, 372, 633, 684
Tru9I	TTAA	4 cut(s)	275, 372, 633, 684
TscAI	CASTG	5 cut(s)	237, 360, 409, 1102, 1192
TseFI	GTSAC	3 cut(s)	355, 365, 400
TseI	GCWGC	2 cut(s)	1143, 1433
Tsp45I	GTSAC	3 cut(s)	355, 365, 400
TspDTI	ATGAA	6 cut(s)	17, 25, 500, 528, 782, 1194
TspGWI	ACGGA	1 cut(s)	853
TspMI	CCCGGG	1 cut(s)	304
TspRI	CASTG	5 cut(s)	237, 360, 409, 1102, 1192
Van91I	CCANNNNNTGG	2 cut(s)	23, 797
VpaK11BI	GGWCC	3 cut(s)	308, 572, 618
VspI	ATTAAT	1 cut(s)	684
XagI	CCTNNNNNAGG	1 cut(s)	591
XapI	RAATTY	1 cut(s)	805
XbaI	TCTAGA	1 cut(s)	1309
XmaI	CCCGGG	1 cut(s)	304
XmnI	GAANNNNTTC	1 cut(s)	32
XspI	CTAG	4 cut(s)	714, 827, 1310, 1320
ZrmI	AGTACT	1 cut(s)	380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.