Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0005341

Physical Location & Seq

Genomic Coordinates Forward (+)

7486430 .. 7492298

Gene Structure 5869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1064400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGACTTCCAAAGAGAATATTGACGACAAGGTGTCAGATTGCGAGACAATAAAGGATTCTGTGTCATCTCAAGGGGATTCACCTATCCTTGAGGATGAGATAGTAGAAAGAGTATCAAGGGTACCCAAAATAGTTGTAAAAAAGAATTCCTCAGAGAGCTCTCCCGGATCCAGGGACAGGGAGTGGTCTCGTAGTGAATCTATTAAGTCAAGATCAAAAGGATTGCATAACACTGCCAACAAAGTCACTAATTCAAATAACGGACCTTCAGGAGTTCAAACCAGAACTTCTACGAAAGGTTCTAGTGATAGTGAAGTTCCCATTGAACCTTCCCCAGAACCATTTGAGGAGGTTGACGATAAGCCTATTAAAGATATAAGAGGAAGTGATATCCTTGATGGGGCCTCAAATGTTGCTCAGAGTGTGGAAAGTGACCGTGAAATAGTAGACGCTGAAGAAAATGGCGAACAAGAGATTGAAACAGCCTTGGAACGAAAGATTGAAGAAATGGAAATCAGAATTGAGAAACTTGAGGAAGAGCTGAGAGAAGTTGCTGCTCTTGAAATTTCCCTCTACGCTGTCGTACCAGAGCATGGGAGCTCTGCGCATAAAGTTCACACACCGGCTCGGCGCATTTCTAGACTTTATATCCATGCTTGCAAGCATTGGACTCAGGGCAAGCGAGCCACAATTGCTAAGAACACTGTATCAGGGCTTGTTTTAATAGCAAAGTCCTGTGGCAATGATGTCCCCAGGTTGACCTTCTGGTTATCAAACACTGTCGTGCTAAGGGAGATCATATCTCAAGCATTTGGCATTTCAAGCGAGTCAAGTCCTTCAGTTAAGTTTGTAGGGTCAAATGGGACTAGCAAGAAAAATGAAGTGAAGTCTGCAACACTGAAATGGAGGGGTGGTTCCAGTAGTAAACAAATGAACGGTTTTATGCAGTATGCTGATGACTGGCAAGAGACAGGAACCTTCACTGCTGCATTGGAAAAAGTTGAATCCTGGATTTTCTCTCGGATCGTTGAGTCAGTATGGTGGCAGGCTTTGACTCCAAATATGCAATCTCCAGCTGAGAATTCATCTATAAATAAGATGTCTGTAAGGTTTTCGGGACCTGCACTGGGTGATCAGAAGCAAGGTAGCTTTTCTGTCAACCTATGGAAAAACGCTTTTCAGGATGCTTCTCAACGACTCTGTCCCGTTCGAGCAGGGGGGCATAAATGTGGCTGCTTGCCTGTTTTGGCAAGAATGGTTATGCAACACTGTGTTGCAAGGCTAGATGTGGCAATGTTCAATGCTATCCTGCGTGAGTCTGCCCATGAGATCCCTACAGATCCAGTATCAGATCCTATTCTTGATTCCAGGGTTTTACCTATTCCCGCTGGTGACTTGAGTTTTGGGTCTGGTGCACAACTCAAAAATTCCGTTGGAAATTGGTCTAGATGGCTAAGTGATATGTTTGACATGGATGCTGATGATTACCTGCAAGAAGACCACCCTGGTGGTGAGGATGATGACAGGCAGATTGGGGATGGTGAATCCGAATCCTTCCTTCTTCTGAATGCCTTGAGTGATCTTTTGATGCTTCCGAAAGACTTGCTTATTGATACGAGAATCAGAAAGGAGGTCTGCCCATCAATTAGTCTTCCATTAGTTAAGCGGATACTTTGCAACTTCACTCCAGATGAGTTCTGTCCGGATGCTGTCCCAGGAGCTGTATTGGAGGCACTGAATGCCGAGAGCATTGTGGAGCGCAGATTGTCAGGTGAATCGGCAAGAAGCTTCCCTTACACAGCAGCACCAGTTGTGTACACCCCACCTTCGTCGGCTGAAGTGGCAGAAAAAGTTTCAGAAGCAGGAGGAAGTTCTCAACTGGAAAGGAAGGTCTCAGCTGTACAGAGAAAGGGATATACCAGCGATGAGGAGCTAGAGGAGTTGGATTCACCTCTTTCATCCATCATCGACAAATTACCGTCAACTCCGACTATCATAGCAAATGGAAATGGAAGCGGAAAACATGAGCATGCAGGTCATCATGCCTGCACGAATGCGAGGTATGAACTCCTTCGTGAGGTGTGGTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

698

Amino Acids

76.39

Weight (kDa)

5.11

Isoelectric Point (pI)

52.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42320 AT2G42320 AT2G42320 AT2G42320
fragaria_vesca	FvH4_6g23000 FvH4_6g23000 FvH4_6g23000 FvH4_6g23000 FvH4_6g23000
malus_domestica	MD12G1064400.v1.1 MD14G1064600.v1.1
prunus_persica	Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1
pyrus_communis	pycom12g05620 pycom14g05230
rosa_chinensis	RchiOBHm_Chr3g0480801
rosa_laevigata	RLG00000023451
rosa_multiflora	Rmu_sc0007944.1_g000009 Rmu_sc0009130.1_g000004
rosa_roxburghii	Rroxscaffold_6G00401060
rosa_rugosa	Rorug03G0186500 Rorug03G0186600
rosa_samantha	Rh3AG238000 Rh3BG271600 Rh3CG267500 Rh3DG263800
rosa_wichuraiana	Rw3G021320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	606
Acc36I	ACCTGC	3 cut(s)	1129, 1497, 2024
Acc65I	GGTACC	1 cut(s)	121
AccB1I	GGYRCC	1 cut(s)	121
AccB7I	CCANNNNNTGG	1 cut(s)	593
AccI	GTMKAC	1 cut(s)	447
AccIII	TCCGGA	1 cut(s)	1702
AciI	CCGC	3 cut(s)	1386, 1666, 2016
AclWI	GGATC	6 cut(s)	162, 175, 1031, 1324, 1334, 1346
AcsI	RAATTY	4 cut(s)	145, 564, 1081, 1426
AcuI	CTGAAG	4 cut(s)	252, 474, 822, 1857
AdeI	CACNNNGTG	1 cut(s)	1130
AfaI	GTAC	4 cut(s)	123, 585, 1817, 1902
AfiI	CCNNNNNNNGG	6 cut(s)	171, 177, 400, 593, 1127, 2077
AgsI	TTSAA	9 cut(s)	255, 278, 326, 479, 503, 563, 822, 1004, 1300
AhdI	GACNNNNNGTC	1 cut(s)	31
AjnI	CCWGG	6 cut(s)	170, 752, 1007, 1367, 1504, 1714
AleI	CACNNNNGTG	2 cut(s)	782, 1506
AloI	GAACNNNNNNTCC	2 cut(s)	898, 930
AluBI	AGCT	9 cut(s)	159, 541, 600, 1076, 1149, 1721, 1788, 1898, 1933
AluI	AGCT	9 cut(s)	159, 541, 600, 1076, 1149, 1721, 1788, 1898, 1933
Alw21I	GWGCWC	3 cut(s)	161, 602, 1417
Alw26I	GTCTC	4 cut(s)	38, 192, 962, 1897
Alw44I	GTGCAC	1 cut(s)	1413
AlwI	GGATC	6 cut(s)	162, 175, 1031, 1324, 1334, 1346
AlwNI	CAGNNNCTG	1 cut(s)	1721
Aor13HI	TCCGGA	1 cut(s)	1702
AoxI	GGCC	1 cut(s)	402
ApaLI	GTGCAC	1 cut(s)	1413
ApeKI	GCWGC	4 cut(s)	554, 986, 1233, 1802
ApoI	RAATTY	4 cut(s)	145, 564, 1081, 1426
ArsI	GACNNNNNNTTYG	2 cut(s)	1385, 1417
Asp700I	GAANNNNTTC	1 cut(s)	2070
Asp718I	GGTACC	1 cut(s)	121
AspLEI	GCGC	3 cut(s)	607, 633, 1761
AspS9I	GGNCC	3 cut(s)	263, 402, 1118
AsuC2I	CCSGG	1 cut(s)	165
AsuHPI	GGTGA	7 cut(s)	72, 1142, 1403, 1523, 1553, 1784, 1941
AvaII	GGWCC	2 cut(s)	263, 1118
BaeGI	GKGCMC	1 cut(s)	1417
BamHI	GGATCC	1 cut(s)	167
BanI	GGYRCC	1 cut(s)	121
BanII	GRGCYC	2 cut(s)	161, 602
BbsI	GAAGAC	2 cut(s)	1503, 1643
Bbv12I	GWGCWC	3 cut(s)	161, 602, 1417
BbvI	GCAGC	4 cut(s)	541, 973, 1220, 1814
BccI	CCATC	5 cut(s)	392, 1443, 1532, 1648, 1970
BcgI	CGANNNNNNTGC	2 cut(s)	1585, 1619
BciT130I	CCWGG	6 cut(s)	172, 754, 1009, 1369, 1506, 1716
BciVI	GTATCC	1 cut(s)	1662
BclI	TGATCA	1 cut(s)	1132
BcnI	CCSGG	1 cut(s)	165
BcoDI	GTCTC	4 cut(s)	38, 192, 962, 1897
BfaI	CTAG	6 cut(s)	303, 639, 867, 1283, 1446, 1934
BfmI	CTRYAG	1 cut(s)	1335
BfuAI	ACCTGC	3 cut(s)	1129, 1497, 2024
BfuI	GTATCC	1 cut(s)	1662
BisI	GCNGC	4 cut(s)	555, 987, 1234, 1803
BlsI	GCNGC	4 cut(s)	556, 988, 1235, 1804
Bme1390I	CCNGG	7 cut(s)	165, 172, 754, 1009, 1369, 1506, 1716
Bme18I	GGWCC	2 cut(s)	263, 1118
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmgT120I	GGNCC	3 cut(s)	263, 402, 1118
BmiI	GGNNCC	6 cut(s)	123, 169, 403, 916, 976, 1119
BmrFI	CCNGG	7 cut(s)	165, 172, 754, 1009, 1369, 1506, 1716
BmrI	ACTGGG	1 cut(s)	1136
BmsI	GCATC	4 cut(s)	1174, 1465, 1578, 1696
BmuI	ACTGGG	1 cut(s)	1136
BpiI	GAAGAC	2 cut(s)	1503, 1643
BpmI	CTGGAG	2 cut(s)	1056, 1671
Bpu10I	CCTNAGC	1 cut(s)	788
BpuEI	CTTGAG	6 cut(s)	54, 110, 551, 789, 1417, 1594
BpuMI	CCSGG	1 cut(s)	165
BsaI	GGTCTC	2 cut(s)	192, 1897
BsaJI	CCNNGG	6 cut(s)	171, 486, 752, 1368, 1504, 1714
BsaWI	WCCGGW	1 cut(s)	1702
BsaXI	ACNNNNNCTCC	2 cut(s)	898, 928
Bsc4I	CCNNNNNNNGG	6 cut(s)	171, 177, 400, 593, 1127, 2077
Bse118I	RCCGGY	1 cut(s)	622
Bse1I	ACTGG	6 cut(s)	918, 965, 1131, 1343, 1808, 1884
Bse3DI	GCAATG	2 cut(s)	748, 1299
BseAI	TCCGGA	1 cut(s)	1702
BseBI	CCWGG	6 cut(s)	172, 754, 1009, 1369, 1506, 1716
BseDI	CCNNGG	6 cut(s)	171, 486, 752, 1368, 1504, 1714
BseGI	GGATG	7 cut(s)	100, 1189, 1480, 1522, 1543, 1711, 1958
BseLI	CCNNNNNNNGG	6 cut(s)	171, 177, 400, 593, 1127, 2077
BseMI	GCAATG	2 cut(s)	748, 1299
BseMII	CTCAG	6 cut(s)	165, 431, 533, 686, 1068, 1908
BseNI	ACTGG	6 cut(s)	918, 965, 1131, 1343, 1808, 1884
BseRI	GAGGAG	3 cut(s)	362, 1943, 1952
BseSI	GKGCMC	1 cut(s)	1417
BseXI	GCAGC	4 cut(s)	541, 973, 1220, 1814
BsgI	GTGCAG	2 cut(s)	1107, 2032
BshFI	GGCC	1 cut(s)	404
BshNI	GGYRCC	1 cut(s)	121
BsiHKAI	GWGCWC	3 cut(s)	161, 602, 1417
BsiSI	CCGG	3 cut(s)	165, 623, 1703
BslFI	GGGAC	6 cut(s)	188, 734, 877, 1131, 1188, 1697
BslI	CCNNNNNNNGG	6 cut(s)	171, 177, 400, 593, 1127, 2077
BsmAI	GTCTC	4 cut(s)	38, 192, 962, 1897
BsmFI	GGGAC	6 cut(s)	188, 734, 877, 1131, 1188, 1697
BsmI	GAATGC	3 cut(s)	1573, 1744, 2059
BsnI	GGCC	1 cut(s)	404
Bso31I	GGTCTC	2 cut(s)	192, 1897
Bsp1286I	GDGCHC	3 cut(s)	161, 602, 1417
Bsp13I	TCCGGA	1 cut(s)	1702
Bsp1407I	TGTACA	2 cut(s)	1815, 1900
Bsp143I	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
BspACI	CCGC	3 cut(s)	1386, 1666, 2016
BspANI	GGCC	1 cut(s)	404
BspCNI	CTCAG	6 cut(s)	164, 430, 534, 685, 1069, 1907
BspEI	TCCGGA	1 cut(s)	1702
BspLI	GGNNCC	6 cut(s)	123, 169, 403, 916, 976, 1119
BspMI	ACCTGC	3 cut(s)	1129, 1497, 2024
BspPI	GGATC	6 cut(s)	162, 175, 1031, 1324, 1334, 1346
BspQI	GCTCTTC	1 cut(s)	531
BspT107I	GGYRCC	1 cut(s)	121
BspTNI	GGTCTC	2 cut(s)	192, 1897
BsrDI	GCAATG	2 cut(s)	748, 1299
BsrFI	RCCGGY	1 cut(s)	622
BsrGI	TGTACA	2 cut(s)	1815, 1900
BsrI	ACTGG	6 cut(s)	918, 965, 1131, 1343, 1808, 1884
BssAI	RCCGGY	1 cut(s)	622
BssECI	CCNNGG	6 cut(s)	171, 486, 752, 1368, 1504, 1714
BssMI	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
BssT1I	CCWWGG	1 cut(s)	486
Bst2UI	CCWGG	6 cut(s)	172, 754, 1009, 1369, 1506, 1716
Bst4CI	ACNGT	6 cut(s)	437, 706, 781, 938, 1271, 1980
Bst6I	CTCTTC	1 cut(s)	531
BstAPI	GCANNNNNTGC	1 cut(s)	1739
BstAUI	TGTACA	2 cut(s)	1815, 1900
BstC8I	GCNNGC	8 cut(s)	658, 662, 680, 684, 1047, 1238, 2031, 2047
BstDEI	CTNAG	9 cut(s)	151, 417, 542, 672, 696, 788, 1077, 1454, 1894
BstENI	CCTNNNNNAGG	1 cut(s)	2075
BstF5I	GGATG	7 cut(s)	100, 1189, 1480, 1522, 1543, 1711, 1958
BstHHI	GCGC	3 cut(s)	607, 633, 1761
BstKTI	GATC	9 cut(s)	170, 215, 798, 1026, 1135, 1332, 1342, 1354, 1582
BstMAI	GTCTC	4 cut(s)	38, 192, 962, 1897
BstMBI	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
BstMWI	GCNNNNNNNGC	4 cut(s)	692, 822, 1739, 1841
BstNI	CCWGG	6 cut(s)	172, 754, 1009, 1369, 1506, 1716
BstNSI	RCATGY	1 cut(s)	2033
BstSCI	CCNGG	7 cut(s)	163, 170, 752, 1007, 1367, 1504, 1714
BstSFI	CTRYAG	1 cut(s)	1335
BstSLI	GKGCMC	1 cut(s)	1417
BstV1I	GCAGC	4 cut(s)	541, 973, 1220, 1814
BstV2I	GAAGAC	2 cut(s)	1503, 1643
BstX2I	RGATCY	4 cut(s)	167, 1329, 1339, 1351
BstXI	CCANNNNNNTGG	1 cut(s)	1508
BstYI	RGATCY	4 cut(s)	167, 1329, 1339, 1351
BsuI	GTATCC	1 cut(s)	1662
BsuRI	GGCC	1 cut(s)	404
BtgZI	GCGATG	1 cut(s)	1938
BtsCI	GGATG	7 cut(s)	100, 1189, 1480, 1522, 1543, 1711, 1958
BtsI	GCAGTG	2 cut(s)	231, 981
BtsIMutI	CAGTG	8 cut(s)	231, 702, 777, 896, 981, 1124, 1267, 1733
BveI	ACCTGC	3 cut(s)	1129, 1497, 2024
Cac8I	GCNNGC	8 cut(s)	658, 662, 680, 684, 1047, 1238, 2031, 2047
CaiI	CAGNNNCTG	1 cut(s)	1721
CfoI	GCGC	3 cut(s)	607, 633, 1761
Cfr10I	RCCGGY	1 cut(s)	622
Cfr13I	GGNCC	3 cut(s)	263, 402, 1118
CseI	GACGC	1 cut(s)	458
Csp6I	GTAC	4 cut(s)	122, 584, 1816, 1901
CviAII	CATG	7 cut(s)	593, 653, 1325, 1471, 2024, 2030, 2042
CviQI	GTAC	4 cut(s)	122, 584, 1816, 1901
DdeI	CTNAG	9 cut(s)	151, 417, 542, 672, 696, 788, 1077, 1454, 1894
DpnI	GATC	9 cut(s)	169, 214, 797, 1025, 1134, 1331, 1341, 1353, 1581
DpnII	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
DraIII	CACNNNGTG	1 cut(s)	1130
DriI	GACNNNNNGTC	1 cut(s)	31
Eam1104I	CTCTTC	1 cut(s)	531
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	1 cut(s)	531
Ecl136II	GAGCTC	2 cut(s)	159, 600
Eco130I	CCWWGG	1 cut(s)	486
Eco24I	GRGCYC	2 cut(s)	161, 602
Eco31I	GGTCTC	2 cut(s)	192, 1897
Eco32I	GATATC	1 cut(s)	391
Eco47I	GGWCC	2 cut(s)	263, 1118
Eco53kI	GAGCTC	2 cut(s)	159, 600
Eco57I	CTGAAG	4 cut(s)	252, 474, 822, 1857
EcoICRI	GAGCTC	2 cut(s)	159, 600
EcoNI	CCTNNNNNAGG	1 cut(s)	2075
EcoO109I	RGGNCCY	2 cut(s)	402, 1118
EcoRI	GAATTC	2 cut(s)	145, 1081
EcoRII	CCWGG	6 cut(s)	170, 752, 1007, 1367, 1504, 1714
EcoRV	GATATC	1 cut(s)	391
EcoT14I	CCWWGG	1 cut(s)	486
EcoT38I	GRGCYC	2 cut(s)	161, 602
ErhI	CCWWGG	1 cut(s)	486
FaeI	CATG	7 cut(s)	596, 656, 1328, 1474, 2027, 2033, 2045
FalI	AAGNNNNNCTT	4 cut(s)	1590, 1622, 1777, 1809
FaqI	GGGAC	6 cut(s)	188, 734, 877, 1131, 1188, 1697
FatI	CATG	7 cut(s)	592, 652, 1324, 1470, 2023, 2029, 2041
FauI	CCCGC	1 cut(s)	1393
FbaI	TGATCA	1 cut(s)	1132
FblI	GTMKAC	1 cut(s)	447
Fnu4HI	GCNGC	4 cut(s)	555, 987, 1234, 1803
FokI	GGATG	7 cut(s)	107, 1196, 1487, 1529, 1550, 1718, 1945
FriOI	GRGCYC	2 cut(s)	161, 602
Fsp4HI	GCNGC	4 cut(s)	555, 987, 1234, 1803
FspBI	CTAG	6 cut(s)	303, 639, 867, 1283, 1446, 1934
FspI	TGCGCA	1 cut(s)	606
GlaI	GCGC	3 cut(s)	606, 632, 1760
GluI	GCNGC	4 cut(s)	555, 987, 1234, 1803
GsuI	CTGGAG	2 cut(s)	1056, 1671
HaeIII	GGCC	1 cut(s)	404
HapII	CCGG	3 cut(s)	165, 623, 1703
HgaI	GACGC	1 cut(s)	458
HhaI	GCGC	3 cut(s)	607, 633, 1761
Hin1II	CATG	7 cut(s)	596, 656, 1328, 1474, 2027, 2033, 2045
Hin6I	GCGC	3 cut(s)	605, 631, 1759
HinP1I	GCGC	3 cut(s)	605, 631, 1759
HincII	GTYRAC	4 cut(s)	355, 759, 1159, 1983
HindII	GTYRAC	4 cut(s)	355, 759, 1159, 1983
HindIII	AAGCTT	1 cut(s)	1786
HpaII	CCGG	3 cut(s)	165, 623, 1703
HphI	GGTGA	7 cut(s)	72, 1142, 1403, 1523, 1553, 1784, 1941
Hpy99I	CGWCG	1 cut(s)	1834
HpyCH4III	ACNGT	6 cut(s)	437, 706, 781, 938, 1271, 1980
HpyF10VI	GCNNNNNNNGC	4 cut(s)	692, 822, 1739, 1841
HpyF3I	CTNAG	9 cut(s)	151, 417, 542, 672, 696, 788, 1077, 1454, 1894
Hsp92II	CATG	7 cut(s)	596, 656, 1328, 1474, 2027, 2033, 2045
HspAI	GCGC	3 cut(s)	605, 631, 1759
Kpn2I	TCCGGA	1 cut(s)	1702
KpnI	GGTACC	1 cut(s)	125
Ksp22I	TGATCA	1 cut(s)	1132
Kzo9I	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
LguI	GCTCTTC	1 cut(s)	531
LmnI	GCTCC	4 cut(s)	597, 1718, 1756, 1930
Lsp1109I	GCAGC	4 cut(s)	541, 973, 1220, 1814
LweI	GCATC	4 cut(s)	1174, 1465, 1578, 1696
MaeI	CTAG	6 cut(s)	303, 639, 867, 1283, 1446, 1934
MaeIII	GTNAC	3 cut(s)	244, 431, 1391
MalI	GATC	9 cut(s)	169, 214, 797, 1025, 1134, 1331, 1341, 1353, 1581
MboI	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
MboII	GAAGA	6 cut(s)	467, 515, 548, 1508, 1553, 1643
MfeI	CAATTG	1 cut(s)	690
MflI	RGATCY	4 cut(s)	167, 1329, 1339, 1351
MhlI	GDGCHC	3 cut(s)	161, 602, 1417
MlyI	GAGTC	6 cut(s)	664, 836, 1040, 1048, 1191, 1325
MmeI	TCCRAC	3 cut(s)	1414, 1923, 2012
MroI	TCCGGA	1 cut(s)	1702
MroXI	GAANNNNTTC	1 cut(s)	2070
MseI	TTAA	6 cut(s)	204, 369, 722, 843, 1662, 2092
MslI	CAYNNNNRTG	5 cut(s)	782, 901, 1227, 1506, 2028
MspA1I	CMGCKG	3 cut(s)	1076, 1388, 1898
MspI	CCGG	3 cut(s)	165, 623, 1703
MspR9I	CCNGG	7 cut(s)	165, 172, 754, 1009, 1369, 1506, 1716
MunI	CAATTG	1 cut(s)	690
Mva1269I	GAATGC	3 cut(s)	1573, 1744, 2059
MvaI	CCWGG	6 cut(s)	172, 754, 1009, 1369, 1506, 1716
MwoI	GCNNNNNNNGC	4 cut(s)	692, 822, 1739, 1841
NciI	CCSGG	1 cut(s)	165
NdeII	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
NlaIII	CATG	7 cut(s)	596, 656, 1328, 1474, 2027, 2033, 2045
NlaIV	GGNNCC	6 cut(s)	123, 169, 403, 916, 976, 1119
NmeAIII	GCCGAG	2 cut(s)	607, 1768
NmuCI	GTSAC	3 cut(s)	244, 431, 1391
NsbI	TGCGCA	1 cut(s)	606
NspI	RCATGY	1 cut(s)	2033
OliI	CACNNNNGTG	2 cut(s)	782, 1506
PaeI	GCATGC	1 cut(s)	2033
PciSI	GCTCTTC	1 cut(s)	531
PctI	GAATGC	3 cut(s)	1573, 1744, 2059
PdmI	GAANNNNTTC	1 cut(s)	2070
PflFI	GACNNNGTC	1 cut(s)	1200
PflMI	CCANNNNNTGG	1 cut(s)	593
PfoI	TCCNGGA	2 cut(s)	163, 1007
PkrI	GCNGC	4 cut(s)	556, 988, 1235, 1804
PleI	GAGTC	6 cut(s)	664, 835, 1039, 1048, 1191, 1324
PpsI	GAGTC	6 cut(s)	664, 835, 1039, 1048, 1191, 1324
PpuMI	RGGWCCY	1 cut(s)	1118
Psp124BI	GAGCTC	2 cut(s)	161, 602
Psp5II	RGGWCCY	1 cut(s)	1118
Psp6I	CCWGG	6 cut(s)	170, 752, 1007, 1367, 1504, 1714
PspGI	CCWGG	6 cut(s)	170, 752, 1007, 1367, 1504, 1714
PspN4I	GGNNCC	6 cut(s)	123, 169, 403, 916, 976, 1119
PspPI	GGNCC	3 cut(s)	263, 402, 1118
PspPPI	RGGWCCY	1 cut(s)	1118
PstNI	CAGNNNCTG	1 cut(s)	1721
PsuI	RGATCY	4 cut(s)	167, 1329, 1339, 1351
PsyI	GACNNNGTC	1 cut(s)	1200
PvuII	CAGCTG	2 cut(s)	1076, 1898
RsaI	GTAC	4 cut(s)	123, 585, 1817, 1902
RsaNI	GTAC	4 cut(s)	122, 584, 1816, 1901
RseI	CAYNNNNRTG	5 cut(s)	782, 901, 1227, 1506, 2028
SacI	GAGCTC	2 cut(s)	161, 602
SapI	GCTCTTC	1 cut(s)	531
SaqAI	TTAA	6 cut(s)	204, 369, 722, 843, 1662, 2092
SatI	GCNGC	4 cut(s)	555, 987, 1234, 1803
Sau3AI	GATC	9 cut(s)	167, 212, 795, 1023, 1132, 1329, 1339, 1351, 1579
Sau96I	GGNCC	3 cut(s)	263, 402, 1118
SchI	GAGTC	6 cut(s)	664, 836, 1040, 1048, 1191, 1325
ScrFI	CCNGG	7 cut(s)	165, 172, 754, 1009, 1369, 1506, 1716
SduI	GDGCHC	3 cut(s)	161, 602, 1417
SfaNI	GCATC	4 cut(s)	1174, 1465, 1578, 1696
SfcI	CTRYAG	1 cut(s)	1335
SinI	GGWCC	2 cut(s)	263, 1118
SmiMI	CAYNNNNRTG	5 cut(s)	782, 901, 1227, 1506, 2028
SmlI	CTYRAG	6 cut(s)	69, 89, 530, 804, 1396, 1573
SmoI	CTYRAG	6 cut(s)	69, 89, 530, 804, 1396, 1573
SphI	GCATGC	1 cut(s)	2033
SsiI	CCGC	3 cut(s)	1386, 1666, 2016
SspI	AATATT	1 cut(s)	19
SspMI	CTAG	6 cut(s)	303, 639, 867, 1283, 1446, 1934
SstI	GAGCTC	2 cut(s)	161, 602
StyD4I	CCNGG	7 cut(s)	163, 170, 752, 1007, 1367, 1504, 1714
StyI	CCWWGG	1 cut(s)	486
TaaI	ACNGT	6 cut(s)	437, 706, 781, 938, 1271, 1980
TaqI	TCGA	2 cut(s)	1210, 1968
TatI	WGTACW	2 cut(s)	1815, 1900
Tru1I	TTAA	6 cut(s)	204, 369, 722, 843, 1662, 2092
Tru9I	TTAA	6 cut(s)	204, 369, 722, 843, 1662, 2092
TscAI	CASTG	8 cut(s)	238, 709, 784, 903, 988, 1131, 1274, 1740
TseFI	GTSAC	3 cut(s)	244, 431, 1391
TseI	GCWGC	4 cut(s)	554, 986, 1233, 1802
Tsp45I	GTSAC	3 cut(s)	244, 431, 1391
TspDTI	ATGAA	5 cut(s)	894, 947, 1074, 1947, 2079
TspGWI	ACGGA	2 cut(s)	276, 1420
TspRI	CASTG	8 cut(s)	238, 709, 784, 903, 988, 1131, 1274, 1740
Tth111I	GACNNNGTC	1 cut(s)	1200
Van91I	CCANNNNNTGG	1 cut(s)	593
VneI	GTGCAC	1 cut(s)	1413
VpaK11BI	GGWCC	2 cut(s)	263, 1118
XagI	CCTNNNNNAGG	1 cut(s)	2075
XapI	RAATTY	4 cut(s)	145, 564, 1081, 1426
XbaI	TCTAGA	2 cut(s)	638, 1445
XceI	RCATGY	1 cut(s)	2033
XmiI	GTMKAC	1 cut(s)	447
XmnI	GAANNNNTTC	1 cut(s)	2070
XspI	CTAG	6 cut(s)	303, 639, 867, 1283, 1446, 1934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.