Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0005341

Physical Location & Seq

Genomic Coordinates Forward (+)

25660758 .. 25664326

Gene Structure 3569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G021320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGAAGGAGGTTGACAAAAGGAAAACTACTAATACTAAAACCACCAAGCGCTCCGGAAGAACTGAAAGGAGAGACCATAAGCTGATTCAAGGGAGTACTGGCAAGACTCTGAATGGAAAAGGAGCTGAATCTAAAGAGTCTCATGCTCGAGCAGGCCCCAATACTTTAGTAAGTAATTTAAACATGGGTACAGAGGCCTCGGAAGTTAATGAAAATGTGGTCATACATTATGTGGATGATGTGAAAAAGTTTGTGGAGGCGCCTCATGATTTAAAAGCCAACCCAATGATTTCCATAGAGAACAATGATGAAGATTCAGATGGTCATTCTAGTGATTTGGAAAAAGAAACAAAGCAGGGGAAAGAAGAGGCGTCAGATTGTGAGACCATAAAGGATTCGGTATCATCTCAAGGAGAATCGACTACCTCTGCGGATGACATAGTAGAAAGCCCTCCAAGGGTTCCCAAAATTATTGGAAGAAAAGATTCCTCAGAGAGCTCTCATGGATCCAGGGAGAGATCTGGTCATGACTCTAGTAACTCAAAATCCAAGGATCACACTCTCAAACAATCCACTACGATACACAAAGGGCCTTCTAGGAATGATTCTAGCAAAATGGAAATTCCCATAAAACCTTCATCAGAATCATCCGAGGAGGTTGGTGACAAGGCTGTCAAAGAAATAGAAGGAAGTGATATTGTCGATAGGTCTTCAAATGGTGCCCAGAGTATTCAAAGTGACAATCAAACGATAGATGCAGAAGAAATTGATGAACAAGAGGATGTTACAGCTTTGGAACAGAAGGTTGAAGAAATGGAAATGAGAATTCAGAAACTTGAAGAAGAACTGCGAGAAGTTGCTGCTCTTGAAATTTCCCTATATTCTGTGGTACCGGAGCATGGGAGCTCCGCACATAAAGTGCACACACCAGCCCGGCGCATTTCTCGACTTTATATTCATGCTTGCAAGCATTGGACTCAGGACAAGCGAGCCACAATTGCTAAGAACACTGTATCAGGGCTTGTTCTAATTGCAAAGTCCTGTGGTAATGATGTTGCCAGGTTGACCTTCTGGTTATCCAATACTGTTGTGCTTAGGGAGATCATATCTCAAGCATTTGGCAGTTCACGTCACTCAAGTCCTTTTTCTAAGTTTGAGTCTAATGGAACTAGCACGAGAAATGATGTGAAGTCTGCAGCACTGAGATGGAGGGGTAGTTCTGGTAGTAAACAAATGAATGGCCTCATGCAGTTTGCCGATGACTGGCAAGAGACAGGAACCTTCACAGCGGCATTAGAAAGAGTTGAATCCTGGATTTTTACTCGGCTAGTTGAGTCCGTGTGGTGGCAGGCTTTGGCTCCGCATATGCAATCTCCAGTCGAGTATTCATCAAATAATAAGATAGCAAGGTTCTTGGGACCTGCCCTCGGTGATCAGAACCAAGGCAGCTTTTCTGTTAACCTGTGGAAAAATGCTTTCCAGGATGCTTCTCAACGACTCTGTCCTGTTCGAGCCGGGGGACACCAGTGTGGCTGCTTGCCTGTGTTGGCGAGAATGGTCATGGGGCAATGTGTTGCCAGGCTAGATGTTGCAATGTTCAATGCTATTCTGCGTGAGTCAGTACATGAGATTCCTACTGATCCAGTGTCGGATCCCATTCTTGATTCCCGGGTTCTACCTATTCCTGCTGGTGATTTGAGTTTTGGATCTGGCGCACAACTAAAGAATTCTGTTGGAAATTGGTCTAGATGGCTAAGTGATATGTTTGGCATGGATGCTGATGATTCTCTGCCCGGAAGTGAGGACGATGACAAGCAGAGTGGAGATGGTGAACCAAAATCCTTCCTTCTTCTCAATGCCTTGAGTGATCTTCTGATGCTTCCAAAAGACATGCTTCTGGACCGCTCGATCAGAAAGGATGTTTGCCCATCAATTAGTCTTCCATTAGTTAAGCGAATACTTTGTAACTTCACTCCAGATGAGTTCTGTCCAGATGCTGTTCCAGGAGCTGTATTAGAGGCACTGAATGCTGAGAGTATTGTGGAGCGGAGATTGTCCGGAGAATCAGCGAGAAGCTTCCCTTATACAGCTGCACCAGTTGTGTACAACCCTCCTTCCTCAGTTGATGTGTCAGAGAAAGTTTCAGTAGGAGAGAGATCTCCATTGGAAAGGAATGTGTCGGCTGTACAAAGAAAGGGATATACAAGTGATGAGGAGCTAGAGGAGCTGGACTCCCCTCTTACAGCCATCATTGACAAATTACCATCATCTCCAGCTTTCATAACAAGTGGAAACGGAAATGGAAAACATGAAGAAACAGGTCATGCCTGCATGAATGCAAGGTATGATCTCCTTCGCGAGGTCTGGTCTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

791

Amino Acids

86.78

Weight (kDa)

5.32

Isoelectric Point (pI)

52.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42320 AT2G42320 AT2G42320 AT2G42320
fragaria_vesca	FvH4_6g23000 FvH4_6g23000 FvH4_6g23000 FvH4_6g23000 FvH4_6g23000
malus_domestica	MD12G1064400.v1.1 MD14G1064600.v1.1
prunus_persica	Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1
pyrus_communis	pycom12g05620 pycom14g05230
rosa_chinensis	RchiOBHm_Chr3g0480801
rosa_laevigata	RLG00000023451
rosa_multiflora	Rmu_sc0007944.1_g000009 Rmu_sc0009130.1_g000004
rosa_roxburghii	Rroxscaffold_6G00401060
rosa_rugosa	Rorug03G0186500 Rorug03G0186600
rosa_samantha	Rh3AG238000 Rh3BG271600 Rh3CG267500 Rh3DG263800
rosa_wichuraiana	Rw3G021320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc36I	ACCTGC	1 cut(s)	1429
Acc65I	GGTACC	1 cut(s)	889
AccB1I	GGYRCC	3 cut(s)	259, 719, 889
AccBSI	CCGCTC	2 cut(s)	1905, 2047
AccII	CGCG	1 cut(s)	2358
AccIII	TCCGGA	2 cut(s)	53, 2057
AciI	CCGC	6 cut(s)	431, 909, 1289, 1361, 1903, 2047
AclWI	GGATC	7 cut(s)	501, 514, 561, 1634, 1646, 1659, 1714
AcsI	RAATTY	4 cut(s)	621, 825, 870, 1726
AcyI	GRCGYC	2 cut(s)	260, 371
AfaI	GTAC	6 cut(s)	97, 190, 891, 1623, 2105, 2187
AfeI	AGCGCT	1 cut(s)	50
AfiI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2359
AgsI	TTSAA	8 cut(s)	89, 714, 734, 809, 839, 869, 1307, 1600
AjiI	CACGTC	1 cut(s)	1130
AjnI	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
AleI	CACNNNNGTG	1 cut(s)	1527
AloI	GAACNNNNNNTCC	2 cut(s)	1201, 1233
Alw21I	GWGCWC	3 cut(s)	500, 908, 924
Alw26I	GTCTC	4 cut(s)	66, 144, 377, 1265
Alw44I	GTGCAC	1 cut(s)	920
AlwI	GGATC	7 cut(s)	501, 514, 561, 1634, 1646, 1659, 1714
AlwNI	CAGNNNCTG	2 cut(s)	1997, 2009
Ama87I	CYCGRG	2 cut(s)	147, 1668
Aor13HI	TCCGGA	2 cut(s)	53, 2057
Aor51HI	AGCGCT	1 cut(s)	50
AoxI	GGCC	4 cut(s)	154, 195, 590, 1240
ApaLI	GTGCAC	1 cut(s)	920
ApeKI	GCWGC	5 cut(s)	860, 1196, 1446, 1533, 2090
ApoI	RAATTY	4 cut(s)	621, 825, 870, 1726
Asp700I	GAANNNNTTC	1 cut(s)	484
Asp718I	GGTACC	1 cut(s)	889
AspLEI	GCGC	4 cut(s)	51, 262, 939, 1715
AspS9I	GGNCC	4 cut(s)	155, 590, 1418, 1900
AsuC2I	CCSGG	5 cut(s)	934, 1516, 1669, 1670, 1794
AsuHPI	GGTGA	4 cut(s)	674, 1442, 1703, 1841
AvaI	CYCGRG	2 cut(s)	147, 1668
AvaII	GGWCC	2 cut(s)	1418, 1900
BaeGI	GKGCMC	2 cut(s)	724, 924
BamHI	GGATCC	2 cut(s)	506, 1651
BanI	GGYRCC	3 cut(s)	259, 719, 889
BanII	GRGCYC	2 cut(s)	500, 908
BauI	CACGAG	1 cut(s)	1174
BbsI	GAAGAC	2 cut(s)	702, 1931
Bbv12I	GWGCWC	3 cut(s)	500, 908, 924
BbvI	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
BccI	CCATC	7 cut(s)	314, 1200, 1743, 1820, 1936, 2255, 2272
BciT130I	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
BclI	TGATCA	1 cut(s)	1432
BcnI	CCSGG	5 cut(s)	934, 1516, 1669, 1670, 1794
BcoDI	GTCTC	4 cut(s)	66, 144, 377, 1265
BfaI	CTAG	9 cut(s)	330, 534, 597, 609, 1170, 1328, 1583, 1746, 2219
BfmI	CTRYAG	1 cut(s)	1194
BfoI	RGCGCY	2 cut(s)	52, 263
BfuAI	ACCTGC	1 cut(s)	1429
BglII	AGATCT	2 cut(s)	518, 2156
BisI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
BlsI	GCNGC	6 cut(s)	862, 1198, 1291, 1448, 1535, 2092
BmcAI	AGTACT	1 cut(s)	97
Bme18I	GGWCC	2 cut(s)	1418, 1900
BmeT110I	CYCGRG	2 cut(s)	147, 1668
BmgBI	CACGTC	1 cut(s)	1130
BmgT120I	GGNCC	4 cut(s)	155, 590, 1418, 1900
BmsI	GCATC	5 cut(s)	745, 1474, 1765, 1866, 1984
BpiI	GAAGAC	2 cut(s)	702, 1931
BplI	GAGNNNNNCTC	2 cut(s)	2216, 2248
BpmI	CTGGAG	3 cut(s)	1359, 1959, 2256
Bpu10I	CCTNAGC	1 cut(s)	1094
BpuEI	CTTGAG	4 cut(s)	393, 1095, 1120, 1882
BpuMI	CCSGG	5 cut(s)	934, 1516, 1669, 1670, 1794
BsaHI	GRCGYC	2 cut(s)	260, 371
BsaI	GGTCTC	2 cut(s)	66, 377
BsaJI	CCNNGG	9 cut(s)	198, 455, 510, 549, 651, 1426, 1441, 1515, 1668
BsaWI	WCCGGW	3 cut(s)	53, 892, 2057
BsaXI	ACNNNNNCTCC	2 cut(s)	1201, 1231
Bsc4I	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2359
Bse1I	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2096
Bse3DI	GCAATG	2 cut(s)	1574, 1599
BseAI	TCCGGA	2 cut(s)	53, 2057
BseBI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
BseDI	CCNNGG	9 cut(s)	198, 455, 510, 549, 651, 1426, 1441, 1515, 1668
BseGI	GGATG	7 cut(s)	241, 439, 647, 787, 1489, 1780, 1924
BseLI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2359
BseMI	GCAATG	2 cut(s)	1574, 1599
BseMII	CTCAG	5 cut(s)	504, 992, 1193, 2022, 2133
BseNI	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2096
BseRI	GAGGAG	3 cut(s)	668, 2228, 2237
BseSI	GKGCMC	2 cut(s)	724, 924
BseXI	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
BsgI	GTGCAG	1 cut(s)	2076
Bsh1236I	CGCG	1 cut(s)	2358
BshFI	GGCC	4 cut(s)	156, 197, 592, 1242
BshNI	GGYRCC	3 cut(s)	259, 719, 889
BsiHKAI	GWGCWC	3 cut(s)	500, 908, 924
BsiHKCI	CYCGRG	2 cut(s)	147, 1668
BsiSI	CCGG	7 cut(s)	54, 893, 934, 1515, 1669, 1794, 2058
BslFI	GGGAC	2 cut(s)	1431, 1533
BslI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2359
BsmAI	GTCTC	4 cut(s)	66, 144, 377, 1265
BsmFI	GGGAC	2 cut(s)	1431, 1533
BsmI	GAATGC	2 cut(s)	2032, 2341
BsnI	GGCC	4 cut(s)	156, 197, 592, 1242
Bso31I	GGTCTC	2 cut(s)	66, 377
BsoBI	CYCGRG	2 cut(s)	147, 1668
Bsp1286I	GDGCHC	4 cut(s)	500, 724, 908, 924
Bsp13I	TCCGGA	2 cut(s)	53, 2057
Bsp1407I	TGTACA	2 cut(s)	2103, 2185
Bsp68I	TCGCGA	1 cut(s)	2358
BspACI	CCGC	6 cut(s)	431, 909, 1289, 1361, 1903, 2047
BspANI	GGCC	4 cut(s)	156, 197, 592, 1242
BspCNI	CTCAG	5 cut(s)	503, 991, 1194, 2023, 2132
BspEI	TCCGGA	2 cut(s)	53, 2057
BspFNI	CGCG	1 cut(s)	2358
BspHI	TCATGA	2 cut(s)	265, 526
BspMAI	CTGCAG	1 cut(s)	1198
BspMI	ACCTGC	1 cut(s)	1429
BspPI	GGATC	7 cut(s)	501, 514, 561, 1634, 1646, 1659, 1714
BspT107I	GGYRCC	3 cut(s)	259, 719, 889
BspTNI	GGTCTC	2 cut(s)	66, 377
BsrBI	CCGCTC	2 cut(s)	1905, 2047
BsrDI	GCAATG	2 cut(s)	1574, 1599
BsrGI	TGTACA	2 cut(s)	2103, 2185
BsrI	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2096
BssECI	CCNNGG	9 cut(s)	198, 455, 510, 549, 651, 1426, 1441, 1515, 1668
BssNI	GRCGYC	2 cut(s)	260, 371
BssSI	CACGAG	1 cut(s)	1174
BssT1I	CCWWGG	3 cut(s)	455, 549, 1441
Bst2BI	CACGAG	1 cut(s)	1174
Bst2UI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
Bst4CI	ACNGT	2 cut(s)	1012, 1087
Bst6I	CTCTTC	1 cut(s)	360
BstACI	GRCGYC	2 cut(s)	260, 371
BstAPI	GCANNNNNTGC	1 cut(s)	2027
BstAUI	TGTACA	2 cut(s)	2103, 2185
BstC8I	GCNNGC	7 cut(s)	154, 964, 968, 990, 1350, 1538, 2329
BstDEI	CTNAG	9 cut(s)	490, 978, 1002, 1094, 1149, 1202, 1754, 2031, 2119
BstENI	CCTNNNNNAGG	1 cut(s)	2357
BstF5I	GGATG	7 cut(s)	241, 439, 647, 787, 1489, 1780, 1924
BstFNI	CGCG	1 cut(s)	2358
BstH2I	RGCGCY	2 cut(s)	52, 263
BstHHI	GCGC	4 cut(s)	51, 262, 939, 1715
BstMAI	GTCTC	4 cut(s)	66, 144, 377, 1265
BstMWI	GCNNNNNNNGC	3 cut(s)	998, 2027, 2224
BstNI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
BstNSI	RCATGY	1 cut(s)	1894
BstSFI	CTRYAG	1 cut(s)	1194
BstSLI	GKGCMC	2 cut(s)	724, 924
BstUI	CGCG	1 cut(s)	2358
BstV1I	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
BstV2I	GAAGAC	2 cut(s)	702, 1931
BstX2I	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2156
BstYI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2156
BsuRI	GGCC	4 cut(s)	156, 197, 592, 1242
BtrI	CACGTC	1 cut(s)	1130
BtsCI	GGATG	7 cut(s)	241, 439, 647, 787, 1489, 1780, 1924
BtsIMutI	CAGTG	5 cut(s)	1008, 1199, 1532, 1650, 2021
BtuMI	TCGCGA	1 cut(s)	2358
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	7 cut(s)	154, 964, 968, 990, 1350, 1538, 2329
CaiI	CAGNNNCTG	2 cut(s)	1997, 2009
CciI	TCATGA	2 cut(s)	265, 526
CfoI	GCGC	4 cut(s)	51, 262, 939, 1715
Cfr13I	GGNCC	4 cut(s)	155, 590, 1418, 1900
Cfr9I	CCCGGG	1 cut(s)	1668
CseI	GACGC	1 cut(s)	360
Csp6I	GTAC	6 cut(s)	96, 189, 890, 1622, 2104, 2186
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CviQI	GTAC	6 cut(s)	96, 189, 890, 1622, 2104, 2186
DdeI	CTNAG	9 cut(s)	490, 978, 1002, 1094, 1149, 1202, 1754, 2031, 2119
DinI	GGCGCC	1 cut(s)	261
DraI	TTTAAA	2 cut(s)	180, 273
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
Eam1104I	CTCTTC	1 cut(s)	360
EarI	CTCTTC	1 cut(s)	360
Ecl136II	GAGCTC	2 cut(s)	498, 906
Eco130I	CCWWGG	3 cut(s)	455, 549, 1441
Eco147I	AGGCCT	1 cut(s)	197
Eco24I	GRGCYC	2 cut(s)	500, 908
Eco31I	GGTCTC	2 cut(s)	66, 377
Eco47I	GGWCC	2 cut(s)	1418, 1900
Eco47III	AGCGCT	1 cut(s)	50
Eco53kI	GAGCTC	2 cut(s)	498, 906
Eco88I	CYCGRG	2 cut(s)	147, 1668
EcoICRI	GAGCTC	2 cut(s)	498, 906
EcoNI	CCTNNNNNAGG	1 cut(s)	2357
EcoO109I	RGGNCCY	3 cut(s)	155, 590, 1418
EcoRI	GAATTC	2 cut(s)	825, 1726
EcoRII	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
EcoT14I	CCWWGG	3 cut(s)	455, 549, 1441
EcoT38I	GRGCYC	2 cut(s)	500, 908
EgeI	GGCGCC	1 cut(s)	261
EheI	GGCGCC	1 cut(s)	261
ErhI	CCWWGG	3 cut(s)	455, 549, 1441
FalI	AAGNNNNNCTT	4 cut(s)	1878, 1910, 2065, 2097
FaqI	GGGAC	2 cut(s)	1431, 1533
FauNDI	CATATG	1 cut(s)	1365
FbaI	TGATCA	1 cut(s)	1432
Fnu4HI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
FokI	GGATG	7 cut(s)	248, 446, 634, 794, 1496, 1787, 1931
FriOI	GRGCYC	2 cut(s)	500, 908
Fsp4HI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
FspBI	CTAG	9 cut(s)	330, 534, 597, 609, 1170, 1328, 1583, 1746, 2219
GlaI	GCGC	4 cut(s)	50, 261, 938, 1714
GluI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
GsuI	CTGGAG	3 cut(s)	1359, 1959, 2256
HaeII	RGCGCY	2 cut(s)	52, 263
HaeIII	GGCC	4 cut(s)	156, 197, 592, 1242
HapII	CCGG	7 cut(s)	54, 893, 934, 1515, 1669, 1794, 2058
HgaI	GACGC	1 cut(s)	360
HhaI	GCGC	4 cut(s)	51, 262, 939, 1715
Hin1I	GRCGYC	2 cut(s)	260, 371
Hin6I	GCGC	4 cut(s)	49, 260, 937, 1713
HinP1I	GCGC	4 cut(s)	49, 260, 937, 1713
HincII	GTYRAC	3 cut(s)	13, 1065, 1459
HindII	GTYRAC	3 cut(s)	13, 1065, 1459
HindIII	AAGCTT	1 cut(s)	2074
HpaI	GTTAAC	1 cut(s)	1459
HpaII	CCGG	7 cut(s)	54, 893, 934, 1515, 1669, 1794, 2058
HphI	GGTGA	4 cut(s)	674, 1442, 1703, 1841
Hpy166II	GTNNAC	8 cut(s)	13, 922, 1065, 1127, 1229, 1459, 1832, 2104
Hpy8I	GTNNAC	8 cut(s)	13, 922, 1065, 1127, 1229, 1459, 1832, 2104
HpyCH4III	ACNGT	2 cut(s)	1012, 1087
HpyCH4IV	ACGT	1 cut(s)	1129
HpyF10VI	GCNNNNNNNGC	3 cut(s)	998, 2027, 2224
HpyF3I	CTNAG	9 cut(s)	490, 978, 1002, 1094, 1149, 1202, 1754, 2031, 2119
HpySE526I	ACGT	1 cut(s)	1129
Hsp92I	GRCGYC	2 cut(s)	260, 371
HspAI	GCGC	4 cut(s)	49, 260, 937, 1713
KasI	GGCGCC	1 cut(s)	259
Kpn2I	TCCGGA	2 cut(s)	53, 2057
KpnI	GGTACC	1 cut(s)	893
Ksp22I	TGATCA	1 cut(s)	1432
KspAI	GTTAAC	1 cut(s)	1459
Lsp1109I	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
LweI	GCATC	5 cut(s)	745, 1474, 1765, 1866, 1984
MaeI	CTAG	9 cut(s)	330, 534, 597, 609, 1170, 1328, 1583, 1746, 2219
MaeII	ACGT	1 cut(s)	1129
MaeIII	GTNAC	6 cut(s)	536, 662, 737, 784, 1130, 1964
MbiI	CCGCTC	2 cut(s)	1905, 2047
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2156
MhlI	GDGCHC	4 cut(s)	500, 724, 908, 924
Mly113I	GGCGCC	1 cut(s)	260
MlyI	GAGTC	9 cut(s)	100, 146, 524, 970, 1166, 1343, 1491, 1625, 2225
MmeI	TCCRAC	2 cut(s)	1629, 1714
MroI	TCCGGA	2 cut(s)	53, 2057
MroXI	GAANNNNTTC	1 cut(s)	484
MseI	TTAA	5 cut(s)	179, 207, 272, 1458, 1950
MslI	CAYNNNNRTG	3 cut(s)	330, 1204, 1527
MspA1I	CMGCKG	2 cut(s)	1289, 2090
MspI	CCGG	7 cut(s)	54, 893, 934, 1515, 1669, 1794, 2058
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	2 cut(s)	2032, 2341
MvaI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
MvnI	CGCG	1 cut(s)	2358
MwoI	GCNNNNNNNGC	3 cut(s)	998, 2027, 2224
NarI	GGCGCC	1 cut(s)	260
NciI	CCSGG	5 cut(s)	934, 1516, 1669, 1670, 1794
NdeI	CATATG	1 cut(s)	1365
NmeAIII	GCCGAG	1 cut(s)	1303
NmuCI	GTSAC	3 cut(s)	662, 737, 1130
NruI	TCGCGA	1 cut(s)	2358
NspI	RCATGY	1 cut(s)	1894
OliI	CACNNNNGTG	1 cut(s)	1527
PaeR7I	CTCGAG	1 cut(s)	147
PagI	TCATGA	2 cut(s)	265, 526
PceI	AGGCCT	1 cut(s)	197
PctI	GAATGC	2 cut(s)	2032, 2341
PdmI	GAANNNNTTC	1 cut(s)	484
PflFI	GACNNNGTC	1 cut(s)	1500
PfoI	TCCNGGA	3 cut(s)	1310, 1479, 2002
PkrI	GCNGC	6 cut(s)	862, 1198, 1291, 1448, 1535, 2092
PleI	GAGTC	9 cut(s)	100, 145, 524, 970, 1165, 1342, 1491, 1624, 2225
PluTI	GGCGCC	1 cut(s)	263
PpsI	GAGTC	9 cut(s)	100, 145, 524, 970, 1165, 1342, 1491, 1624, 2225
PpuMI	RGGWCCY	1 cut(s)	1418
Psp124BI	GAGCTC	2 cut(s)	500, 908
Psp5II	RGGWCCY	1 cut(s)	1418
Psp6I	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
PspGI	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
PspPI	GGNCC	4 cut(s)	155, 590, 1418, 1900
PspPPI	RGGWCCY	1 cut(s)	1418
PspXI	VCTCGAGB	1 cut(s)	147
PstI	CTGCAG	1 cut(s)	1198
PstNI	CAGNNNCTG	2 cut(s)	1997, 2009
PsuI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2156
PsyI	GACNNNGTC	1 cut(s)	1500
PvuII	CAGCTG	1 cut(s)	2090
RruI	TCGCGA	1 cut(s)	2358
RsaI	GTAC	6 cut(s)	97, 190, 891, 1623, 2105, 2187
RsaNI	GTAC	6 cut(s)	96, 189, 890, 1622, 2104, 2186
RseI	CAYNNNNRTG	3 cut(s)	330, 1204, 1527
SacI	GAGCTC	2 cut(s)	500, 908
SaqAI	TTAA	5 cut(s)	179, 207, 272, 1458, 1950
SatI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
Sau96I	GGNCC	4 cut(s)	155, 590, 1418, 1900
ScaI	AGTACT	1 cut(s)	97
SchI	GAGTC	9 cut(s)	100, 146, 524, 970, 1166, 1343, 1491, 1625, 2225
SduI	GDGCHC	4 cut(s)	500, 724, 908, 924
SfaNI	GCATC	5 cut(s)	745, 1474, 1765, 1866, 1984
SfcI	CTRYAG	1 cut(s)	1194
SfoI	GGCGCC	1 cut(s)	261
Sfr274I	CTCGAG	1 cut(s)	147
SinI	GGWCC	2 cut(s)	1418, 1900
SlaI	CTCGAG	1 cut(s)	147
SmaI	CCCGGG	1 cut(s)	1670
SmiMI	CAYNNNNRTG	3 cut(s)	330, 1204, 1527
SmlI	CTYRAG	5 cut(s)	147, 408, 1110, 1135, 1861
SmoI	CTYRAG	5 cut(s)	147, 408, 1110, 1135, 1861
SseBI	AGGCCT	1 cut(s)	197
SsiI	CCGC	6 cut(s)	431, 909, 1289, 1361, 1903, 2047
SspDI	GGCGCC	1 cut(s)	259
SspMI	CTAG	9 cut(s)	330, 534, 597, 609, 1170, 1328, 1583, 1746, 2219
SstI	GAGCTC	2 cut(s)	500, 908
StuI	AGGCCT	1 cut(s)	197
StyI	CCWWGG	3 cut(s)	455, 549, 1441
TaaI	ACNGT	2 cut(s)	1012, 1087
TaiI	ACGT	1 cut(s)	1132
TaqI	TCGA	7 cut(s)	148, 419, 702, 946, 1380, 1510, 1907
TatI	WGTACW	4 cut(s)	95, 1621, 2103, 2185
TauI	GCSGC	1 cut(s)	1292
Tru1I	TTAA	5 cut(s)	179, 207, 272, 1458, 1950
Tru9I	TTAA	5 cut(s)	179, 207, 272, 1458, 1950
TscAI	CASTG	5 cut(s)	1015, 1206, 1532, 1650, 2028
TseFI	GTSAC	3 cut(s)	662, 737, 1130
TseI	GCWGC	5 cut(s)	860, 1196, 1446, 1533, 2090
Tsp45I	GTSAC	3 cut(s)	662, 737, 1130
TspGWI	ACGGA	2 cut(s)	1327, 2310
TspMI	CCCGGG	1 cut(s)	1668
TspRI	CASTG	5 cut(s)	1015, 1206, 1532, 1650, 2028
Tth111I	GACNNNGTC	1 cut(s)	1500
VneI	GTGCAC	1 cut(s)	920
VpaK11BI	GGWCC	2 cut(s)	1418, 1900
XagI	CCTNNNNNAGG	1 cut(s)	2357
XapI	RAATTY	4 cut(s)	621, 825, 870, 1726
XbaI	TCTAGA	1 cut(s)	1745
XceI	RCATGY	1 cut(s)	1894
XhoI	CTCGAG	1 cut(s)	147
XmaI	CCCGGG	1 cut(s)	1668
XmnI	GAANNNNTTC	1 cut(s)	484
XspI	CTAG	9 cut(s)	330, 534, 597, 609, 1170, 1328, 1583, 1746, 2219
ZrmI	AGTACT	1 cut(s)	97

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.