Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0005341

Physical Location & Seq

Genomic Coordinates Reverse (-)

23296721 .. 23302343

Gene Structure 5623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00401060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGAAGGAGGTTGACAAAAGGAAAACTACTAATACTAAAACCACCAAGCGCTCTGGAAGAACTGAAAGGAGAGACCATAAGCTGAACCAAGGGAATACTGGCAAGACTCTGAATGGAAAAGGAACTGAATCTAAAGAGTCTCATGCTAGAACAGGCCCCGGTACTTTAGTAAGTGATTTAAACATGGGTACAGAGGCCTCGGAAGTTAATGAAAATGTGGTCATACATTATGTGGATGATGTGAAGAAGTTTGTGGAGGCGCCTCATGATTTAAAAGCCAACCCAATGATTTCCATAGAGAACAATGATGAAGATTCAGATGGTCATTCTAGTGATTTGGAAAAAGAAACAAAGCAGGGGAAAGAAGAGGCGTCAGATTGTGAGACCGTAAAGGATTCGGTATCATCTCAAGGAGAATCGACTACCTCTGCGGATGACATAGTAGAAAGCCCTCCAAGGGTTCCCAAAATTATTGGAAGAAAAGATTCCTCAGAGAGCTCTCATGGATCCAGGGAGAGATCTGGTCATGAATCTAGTAACTCAAAATCCAAGGATCACACTCGCAAACAATCCACTACGATACACAAAGGGCCTTCTAGGAATGATTCTAGCAATATGGAAATTCCCATAAAACCTTCATCAGAATCATCCGAGGAGGTTGATGACAAGGCTGTCAAAGAAATAGAAGGAAGTGATATTGTTGATAGGTCTTCAAATGGTGCCCAGAGTATTCAAAGTGACAATCAAACGATAGATGCAGAAGAAATTGATGAACAAGAGGATGTTACAGCTTTGGAACAGAAGGTTGAAGAAATGGAAATGAGAATTCAGAAACTTGAAGAAGAACTGCGAGAAGTTGCTGCTCTTGAAATTTCCCTATATTCTGTGGTACCGGAGCATGGGAGCTCCGCACATAAAGTGCACACACCAGCCCGGCGCATTTCTCGACTTTATATTCATGCTTGCAAGCATTGGACTCAGGACAAGCGAGCCACAATTGCTAAGAACACTGTATCAGGGCTTGTTCTAATTGCAAAGTCCTGTGGTAATGATGTTGCCAGGTTGACCTTCTGGTTATCCAATACTGTTGTGCTTAGGGAGATCATATCTCAAGCATTTGGCAGTTCACGTCACTCGAGTCCTTTTTCTAAGTTTGAGTCTAATGGAACTAGCACGAGAAATGATGTGAAGTCTGCAGCACTGAGATGGAGGGGTAGTTCTGGTAGTAAACAAATGAATGGCCTCATGCAGTTTGCCGATGACTGGCAAGAGACAGGAACTTTCACAGCGGCATTAGAAAGAGTTGAATCCTGGATTTTTACTCGGCTAGTTGAGTCCGTGTGGTGGCAGGCTTTGGCTCCGCATATGCAATCTCCAGTCGAGTATTCATCAAATAATAAGATAGCAAGGTTCTTGGGACCTGCCCTCGGTGATCAGAACCAAGGCAGCTTTTCTGTTAACCTGTGGAAAAATGCTTTCCAGGATGCTTCTCAACGACTCTGTCCTGTTCGAGCCGGGGGACACCAGTGTGGCTGCTTGCCTGTGTTGGCGAGAATGGTCATGGGGCAATGTGTTGCCAGGCTAGATGTTGCAATGTTCAATGCTATTCTGCGTGAGTCAGTACATGAGATTCCTACTGATCCAGTGTCAGATCCCATTCTTGATTCCCGGGTTCTACCTATTCCTGCTGGTGATTTGAGTTTTGGATCTGGCGCACAGCTAAAGAATTCTTTGAGGAGGCTGCTTTCCATGCAGGTTGGAAATTGGTCTAGATGGCTAAGTGATATGTTTGGCATGGATGCTGATGATTCTCTGCCCGGAAGTGAGGACGATGACACGCAGAGTGGAGATGGTGAACCAAAATCCTTCCTTCTTCTCAATGCCTTGAGTGATCTTCTGATGCTTCCAAAAGACATGCTTATGGACCGCTCGATCAGAAAGGAGGTTTGCCCATCAATTAGTCTTCCATTAGTTAAGCGAATACTTTGTAACTTCACTCCAGATGAGTTCTGTCCAGATGCTGTTCCAGGAGCTGTATTAGAGGCACTGAATGCTGAGAGTATTGTGGAGAGGAGATTGTCCGGAGAATCAGCGAGAAGCTTCCCTTATACAGCTGCACCAGTTGTTTACAACCCTCCTTCCTCAGTTGATGTGTCAGAGAAAGTTTCAGAAGTAGGAGAGAGATCTCCATTGGAAAGGAATGTGTCGGCTGTACAAAGAAAGGGATATACAAGTGATGAGGAGCTAGAGGAGCTGGACTCCCCTCTTACAGCCATCATTGACAAATTACCATCATCTCCAGCTTTCATAACAAATGGAAACGGAAATGGAAAACATGAAGAAACAGGTCATGCCTGCATGAATGCAAGGTATGATCTCCTTCGCGAGGTCTGGTCTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

800

Amino Acids

88.06

Weight (kDa)

5.26

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42320 AT2G42320 AT2G42320 AT2G42320
fragaria_vesca	FvH4_6g23000 FvH4_6g23000 FvH4_6g23000 FvH4_6g23000 FvH4_6g23000
malus_domestica	MD12G1064400.v1.1 MD14G1064600.v1.1
prunus_persica	Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1 Prupe.7G069500_v2.0.a1
pyrus_communis	pycom12g05620 pycom14g05230
rosa_chinensis	RchiOBHm_Chr3g0480801
rosa_laevigata	RLG00000023451
rosa_multiflora	Rmu_sc0007944.1_g000009 Rmu_sc0009130.1_g000004
rosa_roxburghii	Rroxscaffold_6G00401060
rosa_rugosa	Rorug03G0186500 Rorug03G0186600
rosa_samantha	Rh3AG238000 Rh3BG271600 Rh3CG267500 Rh3DG263800
rosa_wichuraiana	Rw3G021320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc36I	ACCTGC	2 cut(s)	1429, 1744
Acc65I	GGTACC	1 cut(s)	889
AccB1I	GGYRCC	3 cut(s)	259, 719, 889
AccBSI	CCGCTC	1 cut(s)	1929
AccII	CGCG	1 cut(s)	2385
AccIII	TCCGGA	1 cut(s)	2081
AciI	CCGC	5 cut(s)	431, 909, 1289, 1361, 1927
AclWI	GGATC	6 cut(s)	501, 514, 561, 1634, 1646, 1714
AcsI	RAATTY	4 cut(s)	621, 825, 870, 1726
AcyI	GRCGYC	2 cut(s)	260, 371
AfaI	GTAC	5 cut(s)	163, 190, 891, 1623, 2214
AfeI	AGCGCT	1 cut(s)	50
AfiI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2386
AgsI	TTSAA	7 cut(s)	714, 734, 809, 839, 869, 1307, 1600
AjiI	CACGTC	1 cut(s)	1130
AjnI	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2026
AleI	CACNNNNGTG	1 cut(s)	1527
AloI	GAACNNNNNNTCC	2 cut(s)	1201, 1233
Alw21I	GWGCWC	3 cut(s)	500, 908, 924
Alw26I	GTCTC	4 cut(s)	66, 144, 377, 1265
Alw44I	GTGCAC	1 cut(s)	920
AlwI	GGATC	6 cut(s)	501, 514, 561, 1634, 1646, 1714
AlwNI	CAGNNNCTG	2 cut(s)	2021, 2033
Ama87I	CYCGRG	2 cut(s)	1135, 1668
Aor13HI	TCCGGA	1 cut(s)	2081
Aor51HI	AGCGCT	1 cut(s)	50
AoxI	GGCC	4 cut(s)	154, 195, 590, 1240
ApaLI	GTGCAC	1 cut(s)	920
ApeKI	GCWGC	6 cut(s)	860, 1196, 1446, 1533, 1741, 2114
ApoI	RAATTY	4 cut(s)	621, 825, 870, 1726
Asp700I	GAANNNNTTC	1 cut(s)	484
Asp718I	GGTACC	1 cut(s)	889
AspLEI	GCGC	4 cut(s)	51, 262, 939, 1715
AspS9I	GGNCC	4 cut(s)	155, 590, 1418, 1924
AsuC2I	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1818
AsuHPI	GGTGA	3 cut(s)	1442, 1703, 1865
AvaI	CYCGRG	2 cut(s)	1135, 1668
AvaII	GGWCC	2 cut(s)	1418, 1924
BaeGI	GKGCMC	2 cut(s)	724, 924
BaeI	ACNNNNGTAYC	2 cut(s)	153, 186
BamHI	GGATCC	1 cut(s)	506
BanI	GGYRCC	3 cut(s)	259, 719, 889
BanII	GRGCYC	2 cut(s)	500, 908
BauI	CACGAG	1 cut(s)	1174
BbsI	GAAGAC	2 cut(s)	702, 1955
Bbv12I	GWGCWC	3 cut(s)	500, 908, 924
BbvI	GCAGC	6 cut(s)	847, 1208, 1458, 1520, 1728, 2101
BccI	CCATC	7 cut(s)	314, 1200, 1767, 1844, 1960, 2282, 2299
BciT130I	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2028
BclI	TGATCA	1 cut(s)	1432
BcnI	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1818
BcoDI	GTCTC	4 cut(s)	66, 144, 377, 1265
BfmI	CTRYAG	1 cut(s)	1194
BfoI	RGCGCY	2 cut(s)	52, 263
BfuAI	ACCTGC	2 cut(s)	1429, 1744
BglII	AGATCT	2 cut(s)	518, 2183
BisI	GCNGC	7 cut(s)	861, 1197, 1290, 1447, 1534, 1742, 2115
BlsI	GCNGC	7 cut(s)	862, 1198, 1291, 1448, 1535, 1743, 2116
Bme18I	GGWCC	2 cut(s)	1418, 1924
BmeT110I	CYCGRG	2 cut(s)	1135, 1668
BmgBI	CACGTC	1 cut(s)	1130
BmgT120I	GGNCC	4 cut(s)	155, 590, 1418, 1924
BmiI	GGNNCC	8 cut(s)	157, 261, 462, 508, 721, 891, 1359, 1419
BmsI	GCATC	5 cut(s)	745, 1474, 1789, 1890, 2008
BpiI	GAAGAC	2 cut(s)	702, 1955
BplI	GAGNNNNNCTC	2 cut(s)	2243, 2275
BpmI	CTGGAG	3 cut(s)	1359, 1983, 2283
Bpu10I	CCTNAGC	1 cut(s)	1094
BpuEI	CTTGAG	3 cut(s)	393, 1095, 1906
BpuMI	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1818
BsaHI	GRCGYC	2 cut(s)	260, 371
BsaI	GGTCTC	2 cut(s)	66, 377
BsaWI	WCCGGW	2 cut(s)	892, 2081
BsaXI	ACNNNNNCTCC	2 cut(s)	1201, 1231
Bsc4I	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2386
Bse1I	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2120
Bse3DI	GCAATG	2 cut(s)	1574, 1599
BseAI	TCCGGA	1 cut(s)	2081
BseBI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2028
BseGI	GGATG	6 cut(s)	241, 439, 647, 787, 1489, 1804
BseLI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2386
BseMI	GCAATG	2 cut(s)	1574, 1599
BseMII	CTCAG	5 cut(s)	504, 992, 1193, 2046, 2157
BseNI	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2120
BseRI	GAGGAG	5 cut(s)	668, 1750, 2086, 2255, 2264
BseSI	GKGCMC	2 cut(s)	724, 924
BseXI	GCAGC	6 cut(s)	847, 1208, 1458, 1520, 1728, 2101
BsgI	GTGCAG	1 cut(s)	2100
Bsh1236I	CGCG	1 cut(s)	2385
BshFI	GGCC	4 cut(s)	156, 197, 592, 1242
BshNI	GGYRCC	3 cut(s)	259, 719, 889
BsiHKAI	GWGCWC	3 cut(s)	500, 908, 924
BsiHKCI	CYCGRG	2 cut(s)	1135, 1668
BsiSI	CCGG	7 cut(s)	159, 893, 934, 1515, 1669, 1818, 2082
BslFI	GGGAC	2 cut(s)	1431, 1533
BslI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2386
BsmAI	GTCTC	4 cut(s)	66, 144, 377, 1265
BsmFI	GGGAC	2 cut(s)	1431, 1533
BsmI	GAATGC	2 cut(s)	2056, 2368
BsnI	GGCC	4 cut(s)	156, 197, 592, 1242
Bso31I	GGTCTC	2 cut(s)	66, 377
BsoBI	CYCGRG	2 cut(s)	1135, 1668
Bsp1286I	GDGCHC	4 cut(s)	500, 724, 908, 924
Bsp13I	TCCGGA	1 cut(s)	2081
Bsp1407I	TGTACA	1 cut(s)	2212
Bsp68I	TCGCGA	1 cut(s)	2385
BspACI	CCGC	5 cut(s)	431, 909, 1289, 1361, 1927
BspANI	GGCC	4 cut(s)	156, 197, 592, 1242
BspCNI	CTCAG	5 cut(s)	503, 991, 1194, 2047, 2156
BspEI	TCCGGA	1 cut(s)	2081
BspFNI	CGCG	1 cut(s)	2385
BspHI	TCATGA	2 cut(s)	265, 526
BspLI	GGNNCC	8 cut(s)	157, 261, 462, 508, 721, 891, 1359, 1419
BspMAI	CTGCAG	1 cut(s)	1198
BspMI	ACCTGC	2 cut(s)	1429, 1744
BspPI	GGATC	6 cut(s)	501, 514, 561, 1634, 1646, 1714
BspT107I	GGYRCC	3 cut(s)	259, 719, 889
BspTNI	GGTCTC	2 cut(s)	66, 377
BsrBI	CCGCTC	1 cut(s)	1929
BsrDI	GCAATG	2 cut(s)	1574, 1599
BsrGI	TGTACA	1 cut(s)	2212
BsrI	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2120
BssNI	GRCGYC	2 cut(s)	260, 371
BssSI	CACGAG	1 cut(s)	1174
BssT1I	CCWWGG	4 cut(s)	88, 455, 549, 1441
Bst2BI	CACGAG	1 cut(s)	1174
Bst2UI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2028
Bst4CI	ACNGT	3 cut(s)	388, 1012, 1087
Bst6I	CTCTTC	1 cut(s)	360
BstACI	GRCGYC	2 cut(s)	260, 371
BstAPI	GCANNNNNTGC	1 cut(s)	2051
BstAUI	TGTACA	1 cut(s)	2212
BstC8I	GCNNGC	6 cut(s)	964, 968, 990, 1350, 1538, 2356
BstDEI	CTNAG	9 cut(s)	490, 978, 1002, 1094, 1149, 1202, 1778, 2055, 2143
BstENI	CCTNNNNNAGG	1 cut(s)	2384
BstF5I	GGATG	6 cut(s)	241, 439, 647, 787, 1489, 1804
BstFNI	CGCG	1 cut(s)	2385
BstH2I	RGCGCY	2 cut(s)	52, 263
BstHHI	GCGC	4 cut(s)	51, 262, 939, 1715
BstMAI	GTCTC	4 cut(s)	66, 144, 377, 1265
BstMWI	GCNNNNNNNGC	4 cut(s)	998, 1750, 2051, 2251
BstNI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2028
BstNSI	RCATGY	1 cut(s)	1918
BstSFI	CTRYAG	1 cut(s)	1194
BstSLI	GKGCMC	2 cut(s)	724, 924
BstUI	CGCG	1 cut(s)	2385
BstV1I	GCAGC	6 cut(s)	847, 1208, 1458, 1520, 1728, 2101
BstV2I	GAAGAC	2 cut(s)	702, 1955
BstX2I	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2183
BstYI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2183
BsuRI	GGCC	4 cut(s)	156, 197, 592, 1242
BtrI	CACGTC	1 cut(s)	1130
BtsCI	GGATG	6 cut(s)	241, 439, 647, 787, 1489, 1804
BtsIMutI	CAGTG	5 cut(s)	1008, 1199, 1532, 1650, 2045
BtuMI	TCGCGA	1 cut(s)	2385
BveI	ACCTGC	2 cut(s)	1429, 1744
Cac8I	GCNNGC	6 cut(s)	964, 968, 990, 1350, 1538, 2356
CaiI	CAGNNNCTG	2 cut(s)	2021, 2033
CciI	TCATGA	2 cut(s)	265, 526
CfoI	GCGC	4 cut(s)	51, 262, 939, 1715
Cfr13I	GGNCC	4 cut(s)	155, 590, 1418, 1924
Cfr9I	CCCGGG	1 cut(s)	1668
CseI	GACGC	1 cut(s)	360
Csp6I	GTAC	5 cut(s)	162, 189, 890, 1622, 2213
CviQI	GTAC	5 cut(s)	162, 189, 890, 1622, 2213
DdeI	CTNAG	9 cut(s)	490, 978, 1002, 1094, 1149, 1202, 1778, 2055, 2143
DinI	GGCGCC	1 cut(s)	261
DraI	TTTAAA	2 cut(s)	180, 273
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
Eam1104I	CTCTTC	1 cut(s)	360
EarI	CTCTTC	1 cut(s)	360
Ecl136II	GAGCTC	2 cut(s)	498, 906
Eco130I	CCWWGG	4 cut(s)	88, 455, 549, 1441
Eco147I	AGGCCT	1 cut(s)	197
Eco24I	GRGCYC	2 cut(s)	500, 908
Eco31I	GGTCTC	2 cut(s)	66, 377
Eco47I	GGWCC	2 cut(s)	1418, 1924
Eco47III	AGCGCT	1 cut(s)	50
Eco53kI	GAGCTC	2 cut(s)	498, 906
Eco88I	CYCGRG	2 cut(s)	1135, 1668
EcoICRI	GAGCTC	2 cut(s)	498, 906
EcoNI	CCTNNNNNAGG	1 cut(s)	2384
EcoO109I	RGGNCCY	3 cut(s)	155, 590, 1418
EcoRI	GAATTC	2 cut(s)	825, 1726
EcoRII	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2026
EcoT14I	CCWWGG	4 cut(s)	88, 455, 549, 1441
EcoT38I	GRGCYC	2 cut(s)	500, 908
EgeI	GGCGCC	1 cut(s)	261
EheI	GGCGCC	1 cut(s)	261
ErhI	CCWWGG	4 cut(s)	88, 455, 549, 1441
FalI	AAGNNNNNCTT	4 cut(s)	1902, 1934, 2089, 2121
FaqI	GGGAC	2 cut(s)	1431, 1533
FauNDI	CATATG	1 cut(s)	1365
FbaI	TGATCA	1 cut(s)	1432
Fnu4HI	GCNGC	7 cut(s)	861, 1197, 1290, 1447, 1534, 1742, 2115
FokI	GGATG	6 cut(s)	248, 446, 634, 794, 1496, 1811
FriOI	GRGCYC	2 cut(s)	500, 908
Fsp4HI	GCNGC	7 cut(s)	861, 1197, 1290, 1447, 1534, 1742, 2115
GlaI	GCGC	4 cut(s)	50, 261, 938, 1714
GluI	GCNGC	7 cut(s)	861, 1197, 1290, 1447, 1534, 1742, 2115
GsuI	CTGGAG	3 cut(s)	1359, 1983, 2283
HaeII	RGCGCY	2 cut(s)	52, 263
HaeIII	GGCC	4 cut(s)	156, 197, 592, 1242
HapII	CCGG	7 cut(s)	159, 893, 934, 1515, 1669, 1818, 2082
HgaI	GACGC	1 cut(s)	360
HhaI	GCGC	4 cut(s)	51, 262, 939, 1715
Hin1I	GRCGYC	2 cut(s)	260, 371
Hin6I	GCGC	4 cut(s)	49, 260, 937, 1713
HinP1I	GCGC	4 cut(s)	49, 260, 937, 1713
HincII	GTYRAC	3 cut(s)	13, 1065, 1459
HindII	GTYRAC	3 cut(s)	13, 1065, 1459
HindIII	AAGCTT	1 cut(s)	2098
HpaI	GTTAAC	1 cut(s)	1459
HpaII	CCGG	7 cut(s)	159, 893, 934, 1515, 1669, 1818, 2082
HphI	GGTGA	3 cut(s)	1442, 1703, 1865
Hpy166II	GTNNAC	8 cut(s)	13, 922, 1065, 1127, 1229, 1459, 1856, 2128
Hpy8I	GTNNAC	8 cut(s)	13, 922, 1065, 1127, 1229, 1459, 1856, 2128
HpyAV	CCTTC	9 cut(s)	603, 645, 680, 796, 1078, 1876, 1880, 2148, 2390
HpyCH4III	ACNGT	3 cut(s)	388, 1012, 1087
HpyCH4IV	ACGT	1 cut(s)	1129
HpyF10VI	GCNNNNNNNGC	4 cut(s)	998, 1750, 2051, 2251
HpyF3I	CTNAG	9 cut(s)	490, 978, 1002, 1094, 1149, 1202, 1778, 2055, 2143
HpySE526I	ACGT	1 cut(s)	1129
Hsp92I	GRCGYC	2 cut(s)	260, 371
HspAI	GCGC	4 cut(s)	49, 260, 937, 1713
KasI	GGCGCC	1 cut(s)	259
Kpn2I	TCCGGA	1 cut(s)	2081
KpnI	GGTACC	1 cut(s)	893
Ksp22I	TGATCA	1 cut(s)	1432
KspAI	GTTAAC	1 cut(s)	1459
LmnI	GCTCC	7 cut(s)	895, 903, 911, 1363, 2030, 2242, 2251
Lsp1109I	GCAGC	6 cut(s)	847, 1208, 1458, 1520, 1728, 2101
LweI	GCATC	5 cut(s)	745, 1474, 1789, 1890, 2008
MaeII	ACGT	1 cut(s)	1129
MaeIII	GTNAC	5 cut(s)	536, 737, 784, 1130, 1988
MbiI	CCGCTC	1 cut(s)	1929
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2183
MhlI	GDGCHC	4 cut(s)	500, 724, 908, 924
Mly113I	GGCGCC	1 cut(s)	260
MlyI	GAGTC	9 cut(s)	100, 146, 970, 1147, 1166, 1343, 1491, 1625, 2252
MmeI	TCCRAC	1 cut(s)	1738
MroI	TCCGGA	1 cut(s)	2081
MroXI	GAANNNNTTC	1 cut(s)	484
MseI	TTAA	5 cut(s)	179, 207, 272, 1458, 1974
MslI	CAYNNNNRTG	4 cut(s)	330, 1204, 1527, 1919
MspA1I	CMGCKG	2 cut(s)	1289, 2114
MspI	CCGG	7 cut(s)	159, 893, 934, 1515, 1669, 1818, 2082
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	2 cut(s)	2056, 2368
MvaI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2028
MvnI	CGCG	1 cut(s)	2385
MwoI	GCNNNNNNNGC	4 cut(s)	998, 1750, 2051, 2251
NarI	GGCGCC	1 cut(s)	260
NciI	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1818
NdeI	CATATG	1 cut(s)	1365
NlaIV	GGNNCC	8 cut(s)	157, 261, 462, 508, 721, 891, 1359, 1419
NmeAIII	GCCGAG	1 cut(s)	1303
NmuCI	GTSAC	2 cut(s)	737, 1130
NruI	TCGCGA	1 cut(s)	2385
NspI	RCATGY	1 cut(s)	1918
OliI	CACNNNNGTG	1 cut(s)	1527
PaeR7I	CTCGAG	1 cut(s)	1135
PagI	TCATGA	2 cut(s)	265, 526
PceI	AGGCCT	1 cut(s)	197
PctI	GAATGC	2 cut(s)	2056, 2368
PdmI	GAANNNNTTC	1 cut(s)	484
PflFI	GACNNNGTC	1 cut(s)	1500
PfoI	TCCNGGA	3 cut(s)	1310, 1479, 2026
PkrI	GCNGC	7 cut(s)	862, 1198, 1291, 1448, 1535, 1743, 2116
PleI	GAGTC	9 cut(s)	100, 145, 970, 1146, 1165, 1342, 1491, 1624, 2252
PluTI	GGCGCC	1 cut(s)	263
PpsI	GAGTC	9 cut(s)	100, 145, 970, 1146, 1165, 1342, 1491, 1624, 2252
PpuMI	RGGWCCY	1 cut(s)	1418
Psp124BI	GAGCTC	2 cut(s)	500, 908
Psp5II	RGGWCCY	1 cut(s)	1418
Psp6I	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2026
PspGI	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2026
PspN4I	GGNNCC	8 cut(s)	157, 261, 462, 508, 721, 891, 1359, 1419
PspPI	GGNCC	4 cut(s)	155, 590, 1418, 1924
PspPPI	RGGWCCY	1 cut(s)	1418
PspXI	VCTCGAGB	1 cut(s)	1135
PstI	CTGCAG	1 cut(s)	1198
PstNI	CAGNNNCTG	2 cut(s)	2021, 2033
PsuI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2183
PsyI	GACNNNGTC	1 cut(s)	1500
PvuII	CAGCTG	1 cut(s)	2114
RruI	TCGCGA	1 cut(s)	2385
RsaI	GTAC	5 cut(s)	163, 190, 891, 1623, 2214
RsaNI	GTAC	5 cut(s)	162, 189, 890, 1622, 2213
RseI	CAYNNNNRTG	4 cut(s)	330, 1204, 1527, 1919
SacI	GAGCTC	2 cut(s)	500, 908
SaqAI	TTAA	5 cut(s)	179, 207, 272, 1458, 1974
SatI	GCNGC	7 cut(s)	861, 1197, 1290, 1447, 1534, 1742, 2115
Sau96I	GGNCC	4 cut(s)	155, 590, 1418, 1924
SchI	GAGTC	9 cut(s)	100, 146, 970, 1147, 1166, 1343, 1491, 1625, 2252
SduI	GDGCHC	4 cut(s)	500, 724, 908, 924
SfaNI	GCATC	5 cut(s)	745, 1474, 1789, 1890, 2008
SfcI	CTRYAG	1 cut(s)	1194
SfoI	GGCGCC	1 cut(s)	261
Sfr274I	CTCGAG	1 cut(s)	1135
SinI	GGWCC	2 cut(s)	1418, 1924
SlaI	CTCGAG	1 cut(s)	1135
SmaI	CCCGGG	1 cut(s)	1670
SmiMI	CAYNNNNRTG	4 cut(s)	330, 1204, 1527, 1919
SmlI	CTYRAG	4 cut(s)	408, 1110, 1135, 1885
SmoI	CTYRAG	4 cut(s)	408, 1110, 1135, 1885
SseBI	AGGCCT	1 cut(s)	197
SsiI	CCGC	5 cut(s)	431, 909, 1289, 1361, 1927
SspDI	GGCGCC	1 cut(s)	259
SstI	GAGCTC	2 cut(s)	500, 908
StuI	AGGCCT	1 cut(s)	197
StyI	CCWWGG	4 cut(s)	88, 455, 549, 1441
TaaI	ACNGT	3 cut(s)	388, 1012, 1087
TaiI	ACGT	1 cut(s)	1132
TaqI	TCGA	6 cut(s)	419, 946, 1136, 1380, 1510, 1931
TatI	WGTACW	2 cut(s)	1621, 2212
TauI	GCSGC	1 cut(s)	1292
Tru1I	TTAA	5 cut(s)	179, 207, 272, 1458, 1974
Tru9I	TTAA	5 cut(s)	179, 207, 272, 1458, 1974
TscAI	CASTG	5 cut(s)	1015, 1206, 1532, 1650, 2052
TseFI	GTSAC	2 cut(s)	737, 1130
TseI	GCWGC	6 cut(s)	860, 1196, 1446, 1533, 1741, 2114
Tsp45I	GTSAC	2 cut(s)	737, 1130
TspGWI	ACGGA	2 cut(s)	1327, 2337
TspMI	CCCGGG	1 cut(s)	1668
TspRI	CASTG	5 cut(s)	1015, 1206, 1532, 1650, 2052
Tth111I	GACNNNGTC	1 cut(s)	1500
VneI	GTGCAC	1 cut(s)	920
VpaK11BI	GGWCC	2 cut(s)	1418, 1924
XagI	CCTNNNNNAGG	1 cut(s)	2384
XapI	RAATTY	4 cut(s)	621, 825, 870, 1726
XbaI	TCTAGA	1 cut(s)	1769
XceI	RCATGY	1 cut(s)	1918
XcmI	CCANNNNNNNNNTGG	1 cut(s)	95
XhoI	CTCGAG	1 cut(s)	1135
XmaI	CCCGGG	1 cut(s)	1668
XmnI	GAANNNNTTC	1 cut(s)	484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.