Rorug03G0186600

BEST Arabidopsis thaliana protein match is nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0005341
Physical Location & Seq
Reverse (-)
16181397 .. 16185123
3727 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0186600.1

Sequence Viewer

Length: 1608 bp
ATGGCTCAGTTACACGAGCTACTGAAAGAAGATCAGGAGCCGTTTCTTCTCAAGAGCTACATTGCTGACAAACGCGGCCAGCTGAAAAGACCTTCCCCCAAAACCCAATTGCAGGTCAATAAACGAAGACCCATCTCGGAAGTTTCCAACTTCCCCAGAAACCTATGCAAAAATGCTTGCTTTTTCTCCCTCCAAGACTCGCCGGACCTCCGCAAATCGCCGCTGTTCGAGTTCTCGTCGCCGGCGGCTAAATCCCCATGCAAGAGTCCCAATGCCATTTTTCTTCAAATCCCAACCAGAACCGCAGCTCTTCTCGTCGAAGCTGCCATGAGGATTCAGAAACAGTCGACTAGTTCCAAACCCAAAACCCAGAACCACAGCAAAAACCATGGTTTTGGGCTAATTGGGTCCTTGTTGAAGAGACTAAAAACCCGAACCCAAAAGCGTGAAATCGAAGGGAACGGGGTTAAGGTCTCGGTCAAAGACATTCTCAGGTGGGATTCATCGGTTGGGCGCAGAAAGATTTCATCTGAAGATAGCCAGCTAAAAATGGAGGAGGATAAATTTGATTCTGGTCTGAGTTTGGAGGACCAAAGTGCTTCTGAAGTAAGGGCTACTTGTGAGATGTGCTTTGCTTCTTCTAATGTAAACAGTAGGCCCAGTAGTGAAGTTTGGTCTTTGGACATGGACACTTCGAGTAGTTGTCAGTCTGATTACTCGGAAGCGATTTTGGGTACAACAGATTGCGTTTGCTGCGAGACGAAGGTCTTTTGCTGTGAGAGCCCTTTTCGTTTTGTGCTCGAAACAACACCCTCCCCGTCCGGCAGCCGGACCCCGGAGTTCTCATCGCCGGCGACGTCCCCTGTTCGCCACAAACAAGAGGAGAAGGAAGGATTAAAGAATTTTCAAGTTGAAGAAGAGGAGGAAGATAAGGAACAGTGCAGTCCTGTATCAGTACTGGACCCTCCATTCGAAGATGATGACGAGGAGCATGACGAGGAAGACGAAGAACATGGTTTTGATTTGGAATGCAGCTATGCCATTATGCAGAGGACAAAGAAGCAGTTAATGCAGAAGCTTCGTAGATTTGAGAAATTGGCAGAGTTAGATCCTATTGAACTCGAAAAAAGAATGTTAGAAGAAGATGATGATGAAGACCAAGGATATTATAACAGCATCGGTGATGTAGAAGCAGAATCAGAAGAATGTGATGATGATGAGTCGAAAACATCAGAGAGCAGCAGGGAAGAAAATCTTGATGGGTTTGTCAGAGAAGTACTTTGCAAGTCAAGCTTCCCTAGTTCAAAGAGAATTCCGGAAGACGTGAAGAGGTTGGTGTCTGATCTCATTGTTGAGGAACACAGAAAAGAGGATGATGGTTTCAGCAATAGAGAAGAGGTGGTGAGAAGGGTCTGCAAGAGGTTTAACTCCTGGAACGAGGTGGAGTCGAACACCATAGATATGATGGTGGAACAAGATTTCAGAAAGGAACTCGATGGGTGGAAGCAAAATCAAGGTCAGGTGGGAGAGACTGCAGTAGACATTGAGCTTGCTATCTTCGGCCTTCTAGTTGAGGAATTGGCAATGGAACTAGTTTGTTTAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

535

Amino Acids

60.99

Weight (kDa)

4.77

Isoelectric Point (pI)

73.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 462 - 526 3.6e-06 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1170
AatII GACGTC 1 cut(s) 860
Acc36I ACCTGC 1 cut(s) 103
AccI GTMKAC 2 cut(s) 347, 1539
AccII CGCG 1 cut(s) 75
AccIII TCCGGA 1 cut(s) 1315
AciI CCGC 5 cut(s) 75, 211, 221, 245, 303
AclWI GGATC 1 cut(s) 1103
AcoI YGGCCR 1 cut(s) 76
AcsI RAATTY 3 cut(s) 563, 901, 1311
AcuI CTGAAG 2 cut(s) 552, 624
AcyI GRCGYC 1 cut(s) 857
AfaI GTAC 3 cut(s) 736, 957, 1278
AfiI CCNNNNNNNGG 3 cut(s) 112, 828, 835
AgsI TTSAA 6 cut(s) 287, 418, 908, 914, 1118, 1305
AhlI ACTAGT 2 cut(s) 350, 1591
AjiI CACGTC 1 cut(s) 1324
AjnI CCWGG 1 cut(s) 1430
Alw21I GWGCWC 1 cut(s) 801
Alw26I GTCTC 4 cut(s) 415, 478, 752, 1523
AlwI GGATC 1 cut(s) 1103
Aor13HI TCCGGA 1 cut(s) 1315
AoxI GGCC 3 cut(s) 76, 656, 1561
ApeKI GCWGC 6 cut(s) 305, 323, 753, 825, 1032, 1239
ApoI RAATTY 3 cut(s) 563, 901, 1311
ArsI GACNNNNNNTTYG 4 cut(s) 953, 985, 1501, 1533
Asp700I GAANNNNTTC 1 cut(s) 523
AspLEI GCGC 1 cut(s) 516
AspS9I GGNCC 6 cut(s) 205, 408, 589, 657, 831, 961
AsuC2I CCSGG 1 cut(s) 836
AsuHPI GGTGA 2 cut(s) 1193, 1414
AsuII TTCGAA 1 cut(s) 972
AvaII GGWCC 5 cut(s) 205, 408, 589, 831, 961
BanII GRGCYC 1 cut(s) 785
BauI CACGAG 1 cut(s) 14
BbsI GAAGAC 4 cut(s) 133, 1008, 1161, 1326
Bbv12I GWGCWC 1 cut(s) 801
BbvI GCAGC 6 cut(s) 310, 317, 740, 837, 1044, 1251
BccI CCATC 5 cut(s) 140, 1253, 1370, 1459, 1490
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 2 cut(s) 1061, 1095
BciT130I CCWGG 1 cut(s) 1432
BcnI CCSGG 1 cut(s) 836
BcoDI GTCTC 4 cut(s) 415, 478, 752, 1523
BcuI ACTAGT 2 cut(s) 350, 1591
BfaI CTAG 4 cut(s) 351, 1299, 1568, 1592
BfmI CTRYAG 1 cut(s) 1533
BfuAI ACCTGC 1 cut(s) 103
BisI GCNGC 9 cut(s) 76, 221, 246, 306, 324, 754, 826, 1033, 1240
BlsI GCNGC 9 cut(s) 77, 222, 247, 307, 325, 755, 827, 1034, 1241
BmcAI AGTACT 2 cut(s) 957, 1278
Bme1390I CCNGG 2 cut(s) 836, 1432
Bme18I GGWCC 5 cut(s) 205, 408, 589, 831, 961
BmgBI CACGTC 1 cut(s) 1324
BmgT120I GGNCC 6 cut(s) 205, 408, 589, 657, 831, 961
BmiI GGNNCC 4 cut(s) 39, 409, 833, 963
BmrFI CCNGG 2 cut(s) 836, 1432
BmrI ACTGGG 1 cut(s) 654
BmsI GCATC 1 cut(s) 1185
BmuI ACTGGG 1 cut(s) 654
BoxI GACNNNNGTC 1 cut(s) 764
BpiI GAAGAC 4 cut(s) 133, 1008, 1161, 1326
Bpu14I TTCGAA 1 cut(s) 972
BpuEI CTTGAG 1 cut(s) 35
BpuMI CCSGG 1 cut(s) 836
BsaHI GRCGYC 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 478
BsaJI CCNNGG 3 cut(s) 388, 834, 1159
BsaWI WCCGGW 1 cut(s) 1315
Bsc4I CCNNNNNNNGG 3 cut(s) 112, 828, 835
Bse118I RCCGGY 2 cut(s) 241, 850
Bse1I ACTGG 2 cut(s) 660, 963
Bse3DI GCAATG 2 cut(s) 60, 1590
BseAI TCCGGA 1 cut(s) 1315
BseBI CCWGG 1 cut(s) 1432
BseDI CCNNGG 3 cut(s) 388, 834, 1159
BseGI GGATG 1 cut(s) 1378
BseLI CCNNNNNNNGG 3 cut(s) 112, 828, 835
BseMI GCAATG 2 cut(s) 60, 1590
BseMII CTCAG 3 cut(s) 20, 505, 569
BseNI ACTGG 2 cut(s) 660, 963
BseRI GAGGAG 4 cut(s) 569, 896, 935, 1001
BseXI GCAGC 6 cut(s) 310, 317, 740, 837, 1044, 1251
BsgI GTGCAG 1 cut(s) 961
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 3 cut(s) 78, 658, 1563
BsiHKAI GWGCWC 1 cut(s) 801
BsiSI CCGG 7 cut(s) 203, 242, 822, 829, 836, 851, 1316
BslFI GGGAC 2 cut(s) 252, 844
BslI CCNNNNNNNGG 3 cut(s) 112, 828, 835
BsmAI GTCTC 4 cut(s) 415, 478, 752, 1523
BsmBI CGTCTC 1 cut(s) 752
BsmFI GGGAC 2 cut(s) 252, 844
BsmI GAATGC 1 cut(s) 1034
BsnI GGCC 3 cut(s) 78, 658, 1563
Bso31I GGTCTC 1 cut(s) 478
Bsp119I TTCGAA 1 cut(s) 972
Bsp1286I GDGCHC 2 cut(s) 785, 801
Bsp13I TCCGGA 1 cut(s) 1315
Bsp143I GATC 3 cut(s) 31, 1108, 1342
Bsp19I CCATGG 1 cut(s) 388
BspACI CCGC 5 cut(s) 75, 211, 221, 245, 303
BspANI GGCC 3 cut(s) 78, 658, 1563
BspCNI CTCAG 3 cut(s) 19, 504, 570
BspEI TCCGGA 1 cut(s) 1315
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 4 cut(s) 39, 409, 833, 963
BspMAI CTGCAG 1 cut(s) 1537
BspMI ACCTGC 1 cut(s) 103
BspPI GGATC 1 cut(s) 1103
BspQI GCTCTTC 1 cut(s) 315
BspT104I TTCGAA 1 cut(s) 972
BspTNI GGTCTC 1 cut(s) 478
BsrDI GCAATG 2 cut(s) 60, 1590
BsrFI RCCGGY 2 cut(s) 241, 850
BsrI ACTGG 2 cut(s) 660, 963
BssAI RCCGGY 2 cut(s) 241, 850
BssECI CCNNGG 3 cut(s) 388, 834, 1159
BssMI GATC 3 cut(s) 31, 1108, 1342
BssNI GRCGYC 1 cut(s) 857
BssSI CACGAG 1 cut(s) 14
BssT1I CCWWGG 2 cut(s) 388, 1159
Bst2BI CACGAG 1 cut(s) 14
Bst2UI CCWGG 1 cut(s) 1432
Bst4CI ACNGT 3 cut(s) 345, 653, 939
Bst6I CTCTTC 5 cut(s) 315, 413, 912, 1322, 1389
BstACI GRCGYC 1 cut(s) 857
BstAPI GCANNNNNTGC 1 cut(s) 1069
BstBI TTCGAA 1 cut(s) 972
BstC8I GCNNGC 6 cut(s) 80, 178, 243, 542, 852, 1551
BstDEI CTNAG 3 cut(s) 6, 491, 578
BstDSI CCRYGG 1 cut(s) 388
BstF5I GGATG 1 cut(s) 1378
BstFNI CGCG 1 cut(s) 75
BstHHI GCGC 1 cut(s) 516
BstKTI GATC 3 cut(s) 34, 1111, 1345
BstMAI GTCTC 4 cut(s) 415, 478, 752, 1523
BstMBI GATC 3 cut(s) 31, 1108, 1342
BstMWI GCNNNNNNNGC 4 cut(s) 753, 780, 1069, 1290
BstNI CCWGG 1 cut(s) 1432
BstPAI GACNNNNGTC 1 cut(s) 764
BstSCI CCNGG 2 cut(s) 834, 1430
BstSFI CTRYAG 1 cut(s) 1533
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 6 cut(s) 310, 317, 740, 837, 1044, 1251
BstV2I GAAGAC 4 cut(s) 133, 1008, 1161, 1326
BstX2I RGATCY 1 cut(s) 1108
BstXI CCANNNNNNTGG 1 cut(s) 395
BstYI RGATCY 1 cut(s) 1108
BsuRI GGCC 3 cut(s) 78, 658, 1563
BtgI CCRYGG 1 cut(s) 388
BtgZI GCGATG 1 cut(s) 831
BtrI CACGTC 1 cut(s) 1324
BtsCI GGATG 1 cut(s) 1378
BtsIMutI CAGTG 1 cut(s) 944
BveI ACCTGC 1 cut(s) 103
Cac8I GCNNGC 6 cut(s) 80, 178, 243, 542, 852, 1551
CfoI GCGC 1 cut(s) 516
Cfr10I RCCGGY 2 cut(s) 241, 850
Cfr13I GGNCC 6 cut(s) 205, 408, 589, 657, 831, 961
Csp6I GTAC 3 cut(s) 735, 956, 1277
CviAII CATG 6 cut(s) 258, 328, 389, 685, 992, 1013
CviQI GTAC 3 cut(s) 735, 956, 1277
DdeI CTNAG 3 cut(s) 6, 491, 578
DpnI GATC 3 cut(s) 33, 1110, 1344
DpnII GATC 3 cut(s) 31, 1108, 1342
EaeI YGGCCR 1 cut(s) 76
Eam1104I CTCTTC 5 cut(s) 315, 413, 912, 1322, 1389
EarI CTCTTC 5 cut(s) 315, 413, 912, 1322, 1389
Eco130I CCWWGG 2 cut(s) 388, 1159
Eco24I GRGCYC 1 cut(s) 785
Eco31I GGTCTC 1 cut(s) 478
Eco47I GGWCC 5 cut(s) 205, 408, 589, 831, 961
Eco57I CTGAAG 2 cut(s) 552, 624
EcoO109I RGGNCCY 1 cut(s) 408
EcoRI GAATTC 1 cut(s) 1311
EcoRII CCWGG 1 cut(s) 1430
EcoT14I CCWWGG 2 cut(s) 388, 1159
EcoT38I GRGCYC 1 cut(s) 785
ErhI CCWWGG 2 cut(s) 388, 1159
Esp3I CGTCTC 1 cut(s) 752
FaeI CATG 6 cut(s) 261, 331, 392, 688, 995, 1016
FalI AAGNNNNNCTT 6 cut(s) 601, 633, 1239, 1271, 1277, 1309
FaqI GGGAC 2 cut(s) 252, 844
FatI CATG 6 cut(s) 257, 327, 388, 684, 991, 1012
FblI GTMKAC 2 cut(s) 347, 1539
Fnu4HI GCNGC 9 cut(s) 76, 221, 246, 306, 324, 754, 826, 1033, 1240
FokI GGATG 1 cut(s) 1385
FriOI GRGCYC 1 cut(s) 785
Fsp4HI GCNGC 9 cut(s) 76, 221, 246, 306, 324, 754, 826, 1033, 1240
FspBI CTAG 4 cut(s) 351, 1299, 1568, 1592
GlaI GCGC 1 cut(s) 515
GluI GCNGC 9 cut(s) 76, 221, 246, 306, 324, 754, 826, 1033, 1240
HaeIII GGCC 3 cut(s) 78, 658, 1563
HapII CCGG 7 cut(s) 203, 242, 822, 829, 836, 851, 1316
HhaI GCGC 1 cut(s) 516
Hin1I GRCGYC 1 cut(s) 857
Hin1II CATG 6 cut(s) 261, 331, 392, 688, 995, 1016
Hin6I GCGC 1 cut(s) 514
HinP1I GCGC 1 cut(s) 514
HincII GTYRAC 1 cut(s) 348
HindII GTYRAC 1 cut(s) 348
HindIII AAGCTT 2 cut(s) 1076, 1291
HinfI GANTC 8 cut(s) 197, 265, 334, 500, 569, 1196, 1220, 1445
HpaII CCGG 7 cut(s) 203, 242, 822, 829, 836, 851, 1316
HphI GGTGA 2 cut(s) 1193, 1414
Hpy166II GTNNAC 3 cut(s) 348, 649, 1540
Hpy188III TCNNGA 4 cut(s) 35, 52, 1256, 1316
Hpy8I GTNNAC 3 cut(s) 348, 649, 1540
Hpy99I CGWCG 3 cut(s) 241, 320, 859
HpyAV CCTTC 7 cut(s) 102, 449, 757, 880, 884, 1401, 1574
HpyCH4III ACNGT 3 cut(s) 345, 653, 939
HpyCH4IV ACGT 2 cut(s) 857, 1323
HpyF10VI GCNNNNNNNGC 4 cut(s) 753, 780, 1069, 1290
HpyF3I CTNAG 3 cut(s) 6, 491, 578
HpySE526I ACGT 2 cut(s) 857, 1323
Hsp92I GRCGYC 1 cut(s) 857
Hsp92II CATG 6 cut(s) 261, 331, 392, 688, 995, 1016
HspAI GCGC 1 cut(s) 514
Kpn2I TCCGGA 1 cut(s) 1315
KroI GCCGGC 2 cut(s) 241, 850
KroNI GCCGGC 2 cut(s) 243, 852
Kzo9I GATC 3 cut(s) 31, 1108, 1342
LguI GCTCTTC 1 cut(s) 315
LmnI GCTCC 2 cut(s) 37, 988
Lsp1109I GCAGC 6 cut(s) 310, 317, 740, 837, 1044, 1251
LweI GCATC 1 cut(s) 1185
MaeI CTAG 4 cut(s) 351, 1299, 1568, 1592
MaeII ACGT 2 cut(s) 857, 1323
MaeIII GTNAC 1 cut(s) 9
MalI GATC 3 cut(s) 33, 1110, 1344
MboI GATC 3 cut(s) 31, 1108, 1342
MfeI CAATTG 1 cut(s) 107
MflI RGATCY 1 cut(s) 1108
MhlI GDGCHC 2 cut(s) 785, 801
MluCI AATT 7 cut(s) 107, 402, 563, 901, 1094, 1311, 1577
MlyI GAGTC 4 cut(s) 191, 274, 1229, 1454
MmeI TCCRAC 1 cut(s) 171
MreI CGCCGGCG 2 cut(s) 241, 850
MroI TCCGGA 1 cut(s) 1315
MroNI GCCGGC 2 cut(s) 241, 850
MroXI GAANNNNTTC 1 cut(s) 523
MseI TTAA 5 cut(s) 468, 896, 1067, 1425, 1601
MslI CAYNNNNRTG 1 cut(s) 1460
MspA1I CMGCKG 2 cut(s) 82, 223
MspI CCGG 7 cut(s) 203, 242, 822, 829, 836, 851, 1316
MspR9I CCNGG 2 cut(s) 836, 1432
MunI CAATTG 1 cut(s) 107
Mva1269I GAATGC 1 cut(s) 1034
MvaI CCWGG 1 cut(s) 1432
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 4 cut(s) 753, 780, 1069, 1290
NaeI GCCGGC 2 cut(s) 243, 852
NciI CCSGG 1 cut(s) 836
NcoI CCATGG 1 cut(s) 388
NdeII GATC 3 cut(s) 31, 1108, 1342
NgoMIV GCCGGC 2 cut(s) 241, 850
NlaIII CATG 6 cut(s) 261, 331, 392, 688, 995, 1016
NlaIV GGNNCC 4 cut(s) 39, 409, 833, 963
NspV TTCGAA 1 cut(s) 972
PciSI GCTCTTC 1 cut(s) 315
PcsI WCGNNNNNNNCGW 2 cut(s) 854, 1002
PctI GAATGC 1 cut(s) 1034
PdiI GCCGGC 2 cut(s) 243, 852
PdmI GAANNNNTTC 1 cut(s) 523
PfeI GAWTC 4 cut(s) 334, 500, 569, 1196
PfoI TCCNGGA 1 cut(s) 1430
PkrI GCNGC 9 cut(s) 77, 222, 247, 307, 325, 755, 827, 1034, 1241
PleI GAGTC 4 cut(s) 191, 273, 1228, 1453
PpsI GAGTC 4 cut(s) 191, 273, 1228, 1453
PpuMI RGGWCCY 1 cut(s) 408
PshAI GACNNNNGTC 1 cut(s) 764
PsiI TTATAA 1 cut(s) 1170
Psp5II RGGWCCY 1 cut(s) 408
Psp6I CCWGG 1 cut(s) 1430
PspGI CCWGG 1 cut(s) 1430
PspN4I GGNNCC 4 cut(s) 39, 409, 833, 963
PspPI GGNCC 6 cut(s) 205, 408, 589, 657, 831, 961
PspPPI RGGWCCY 1 cut(s) 408
PstI CTGCAG 1 cut(s) 1537
PsuI RGATCY 1 cut(s) 1108
PvuII CAGCTG 1 cut(s) 82
RsaI GTAC 3 cut(s) 736, 957, 1278
RsaNI GTAC 3 cut(s) 735, 956, 1277
RseI CAYNNNNRTG 1 cut(s) 1460
SalI GTCGAC 1 cut(s) 346
SapI GCTCTTC 1 cut(s) 315
SaqAI TTAA 5 cut(s) 468, 896, 1067, 1425, 1601
SatI GCNGC 9 cut(s) 76, 221, 246, 306, 324, 754, 826, 1033, 1240
Sau3AI GATC 3 cut(s) 31, 1108, 1342
Sau96I GGNCC 6 cut(s) 205, 408, 589, 657, 831, 961
ScaI AGTACT 2 cut(s) 957, 1278
SchI GAGTC 4 cut(s) 191, 274, 1229, 1454
ScrFI CCNGG 2 cut(s) 836, 1432
SduI GDGCHC 2 cut(s) 785, 801
SfaNI GCATC 1 cut(s) 1185
SfcI CTRYAG 1 cut(s) 1533
SfuI TTCGAA 1 cut(s) 972
SgrAI CRCCGGYG 2 cut(s) 241, 850
SinI GGWCC 5 cut(s) 205, 408, 589, 831, 961
SmiMI CAYNNNNRTG 1 cut(s) 1460
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
SpeI ACTAGT 2 cut(s) 350, 1591
Sse9I AATT 7 cut(s) 107, 402, 563, 901, 1094, 1311, 1577
SsiI CCGC 5 cut(s) 75, 211, 221, 245, 303
SspMI CTAG 4 cut(s) 351, 1299, 1568, 1592
StyD4I CCNGG 2 cut(s) 834, 1430
StyI CCWWGG 2 cut(s) 388, 1159
TaaI ACNGT 3 cut(s) 345, 653, 939
TaiI ACGT 2 cut(s) 860, 1326
TaqII GACCGA 1 cut(s) 466
TasI AATT 7 cut(s) 107, 402, 563, 901, 1094, 1311, 1577
TatI WGTACW 2 cut(s) 955, 1276
TauI GCSGC 3 cut(s) 78, 223, 248
TfiI GAWTC 4 cut(s) 334, 500, 569, 1196
Tru1I TTAA 5 cut(s) 468, 896, 1067, 1425, 1601
Tru9I TTAA 5 cut(s) 468, 896, 1067, 1425, 1601
TscAI CASTG 1 cut(s) 944
TseI GCWGC 6 cut(s) 305, 323, 753, 825, 1032, 1239
TspDTI ATGAA 3 cut(s) 492, 516, 1167
TspRI CASTG 1 cut(s) 944
VpaK11BI GGWCC 5 cut(s) 205, 408, 589, 831, 961
XapI RAATTY 3 cut(s) 563, 901, 1311
XcmI CCANNNNNNNNNTGG 1 cut(s) 1462
XmiI GTMKAC 2 cut(s) 347, 1539
XmnI GAANNNNTTC 1 cut(s) 523
XspI CTAG 4 cut(s) 351, 1299, 1568, 1592
ZraI GACGTC 1 cut(s) 858
ZrmI AGTACT 2 cut(s) 957, 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.