Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0011071

Physical Location & Seq

Genomic Coordinates Reverse (-)

19203775 .. 19208700

Gene Structure 4926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1120000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGATCAACACGGCCAACGGTATGATGCAAACGACTTCGTCTAGCAACGCTCAGTCGCCGGGCCTCAAGACCTATTTCAAAACCCCTGAGGGGAAGTACAAGCTTCACTACGAGAAGACGCACCCTTCGGGCCTCCTTCACTTCGCCCATGGCAAAACCGTCACTCAGGCAATACTAGCACAACTTAAGGACAAGCCTGCTCCATCAACCCCGACTGCGCCATCTTCGAGCTTCAGCACTGGCAGTGGCGTACGTTCGGCTGCAGCACGGTTTTTGGGTGGTGCTAATGGGAGCCGGGCGCTTAGTTTTGCTGGAGGGAATGGAGGGAGTAAGAGTGTCAGTGCGAGTAGTAGAGTTGGGTCTTTGGTGGCTTCCAGTTCGAATACTTCAACATCTACTTCGAACTTTGATGGGAAGGGGACTTACTTGATCTTCAATGTGGGGGATGCGATCTTCATCAGTGATTTAAATTCTCAAGACAAGGATCCAATAAAGTCTATACATTTCAGTAATTCAAACCCTGTCTGCCACGCATTTGATCAAGACGCAAAGGATGGTCATGATTTGATTATTGGGTTGAGTTCCGGTGATGTCTACTCAGTGTCACTGAGACAGCAATTGCAGGATGTTGGAAAGAAGCTTGTAGGTGCTCAGCATTATAATAAAGATGGCTCTGTTAGTAACAGCCGTTGTACTAGTATTGCATGGGTTCCTGGTGGTGACGGTGCTTTTGTTGTTGCTCATGCCGATGGGAATCTATATAGCAAAGATGGGGCTGGTGATTCTGCATTCCCTATTATTAAAGATCCAGCTCAATTTTCAGTTTCCCATGCACGTTACAATAAGAGTAACCCATTTGTCAGATGGCATATCGGCCAAGGTTATGTTAATAGTATTGCTTTCTCGACTGATGGGGCCTATTTAGCAACTGTTGGAAGAGATGGTATAATGTCAATACGATATTGTTTGCGTTGTGCAATTGGTCTTTGCTGTCCTGGTTATCTACGTGTTTTTGACTACTCAAAAGAGCAACTTATATGCGGTGGAAAAAGTTACTATGGTGCTCTCTTATGTTGCGCTTGGAGCATGGATGGAAAATACATACTCACAGGAGGCGAAGATGATTTAGTTCAAGTTTGGAGCATGGAAGATCGGAAAGTTGTAGCTTGGGGAGAGGGTCACAACTCTTGGGTCAGTGGAGTGGCTTTTGATTCATATTGTTCATCACCAAATTCAGATGGCATGGGGGAAACTGTCATGTACCGGTTTGGTTCAGTCGGTCAGGACACACAGTTGCTTCTGTGGGACCTGGAGATGGATGAGATTGTGGTGCCATTGCGACGATGCCCTCCTGGTGGCTCCCCCACATATAGTGTTGGAAGCCAGTCATCTCACTGGGACAATGCACTTCCCGTGGGTGCCCTGCAGCCTGCTCCAAGCATGCGAGATGTTCCAAAAATCTCACCGCTGGTTGCTCACCGGGTACACACTGAACCCCTCTCTGGCGTAATGTTTACCCAAGAATCCGTTCTTACTGTCTGCAGAGAGGGGCATATAAAAGTTTGGGGGAGACCCGGTGTTTCAGAAACCCATCAAACAACTCAGCTGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0007154 GO:0007584 GO:0008150 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0042221 GO:0045013 GO:0045892 GO:0045934 GO:0045990 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061984 GO:0061985 GO:0065007 GO:0070887 GO:0071496 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

538

Amino Acids

57.38

Weight (kDa)

7.24

Isoelectric Point (pI)

38.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_1st	PF25173	333 - 441	2.3e-06	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	335 - 405	3.6e-07	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	358 - 441	3.7e-07	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011071)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37160 AT2G37160 AT3G53390
fragaria_vesca	FvH4_6g15710 FvH4_6g15710
malus_domestica	MD04G1099900.v1.1 MD12G1120000.v1.1
prunus_persica	Prupe.6G238200_v2.0.a1
pyrus_communis	pycom04g09500 pycom12g11890
rosa_chinensis	RchiOBHm_Chr3g0469411
rosa_laevigata	RLG00000024351
rosa_multiflora	Rmu_sc0005274.1_g000009
rosa_roxburghii	Rroxscaffold_6G00411910
rosa_rugosa	Rorug03G0101600
rosa_samantha	Rh3AG150600 Rh3BG174300 Rh3CG165300 Rh3DG201100
rosa_wichuraiana	Rw3G014200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	660
AccB1I	GGYRCC	2 cut(s)	1330, 1418
AccI	GTMKAC	1 cut(s)	594
AciI	CCGC	2 cut(s)	1041, 1466
AclWI	GGATC	3 cut(s)	479, 492, 800
AcoI	YGGCCR	2 cut(s)	12, 874
AcsI	RAATTY	2 cut(s)	469, 1231
AcuI	CTGAAG	1 cut(s)	217
AfaI	GTAC	5 cut(s)	98, 252, 694, 1262, 1485
AfiI	CCNNNNNNNGG	4 cut(s)	90, 1315, 1355, 1502
AflII	CTTAAG	1 cut(s)	185
AflIII	ACRYGT	1 cut(s)	1006
AgeI	ACCGGT	1 cut(s)	1263
AgsI	TTSAA	5 cut(s)	79, 390, 436, 516, 1133
AhlI	ACTAGT	1 cut(s)	695
AjnI	CCWGG	4 cut(s)	712, 994, 1308, 1351
AjuI	GAANNNNNNNTTGG	2 cut(s)	1512, 1544
AluBI	AGCT	6 cut(s)	103, 231, 640, 812, 1166, 1606
AluI	AGCT	6 cut(s)	103, 231, 640, 812, 1166, 1606
Alw21I	GWGCWC	2 cut(s)	652, 1066
Alw26I	GTCTC	2 cut(s)	604, 1564
AlwI	GGATC	3 cut(s)	479, 492, 800
AoxI	GGCC	5 cut(s)	12, 61, 130, 874, 915
ApeKI	GCWGC	3 cut(s)	260, 263, 1426
ApoI	RAATTY	2 cut(s)	469, 1231
ArsI	GACNNNNNNTTYG	4 cut(s)	109, 141, 713, 745
AsiGI	ACCGGT	1 cut(s)	1263
Asp700I	GAANNNNTTC	1 cut(s)	1527
AspLEI	GCGC	3 cut(s)	220, 301, 1079
AspS9I	GGNCC	4 cut(s)	61, 130, 915, 1306
AsuC2I	CCSGG	4 cut(s)	60, 296, 1481, 1575
AsuHPI	GGTGA	6 cut(s)	599, 731, 791, 1218, 1455, 1469
AsuII	TTCGAA	2 cut(s)	380, 401
AvaII	GGWCC	1 cut(s)	1306
AxyI	CCTNAGG	1 cut(s)	87
BaeGI	GKGCMC	1 cut(s)	1423
BamHI	GGATCC	1 cut(s)	484
BanI	GGYRCC	2 cut(s)	1330, 1418
BarI	GAAGNNNNNNTAC	2 cut(s)	407, 439
BbsI	GAAGAC	1 cut(s)	122
Bbv12I	GWGCWC	2 cut(s)	652, 1066
BbvI	GCAGC	3 cut(s)	247, 275, 1438
BceAI	ACGGC	2 cut(s)	27, 672
BciT130I	CCWGG	4 cut(s)	714, 996, 1310, 1353
BclI	TGATCA	2 cut(s)	3, 538
BcnI	CCSGG	4 cut(s)	60, 296, 1481, 1575
BcoDI	GTCTC	2 cut(s)	604, 1564
BcuI	ACTAGT	1 cut(s)	695
BfaI	CTAG	3 cut(s)	42, 176, 696
BfmI	CTRYAG	3 cut(s)	261, 1424, 1540
BfoI	RGCGCY	1 cut(s)	302
BfrI	CTTAAG	1 cut(s)	185
BisI	GCNGC	3 cut(s)	261, 264, 1427
BlpI	GCTNAGC	1 cut(s)	651
BlsI	GCNGC	3 cut(s)	262, 265, 1428
Bme1390I	CCNGG	8 cut(s)	60, 296, 714, 996, 1310, 1353, 1481, 1575
Bme18I	GGWCC	1 cut(s)	1306
BmgT120I	GGNCC	4 cut(s)	61, 130, 915, 1306
BmiI	GGNNCC	8 cut(s)	293, 486, 711, 916, 1307, 1332, 1360, 1420
BmrFI	CCNGG	8 cut(s)	60, 296, 714, 996, 1310, 1353, 1481, 1575
BmrI	ACTGGG	1 cut(s)	1405
BmsI	GCATC	3 cut(s)	15, 436, 1334
BmuI	ACTGGG	1 cut(s)	1405
BpiI	GAAGAC	1 cut(s)	122
BpmI	CTGGAG	2 cut(s)	333, 1331
Bpu1102I	GCTNAGC	1 cut(s)	651
Bpu14I	TTCGAA	2 cut(s)	380, 401
BpuEI	CTTGAG	2 cut(s)	50, 459
BpuMI	CCSGG	4 cut(s)	60, 296, 1481, 1575
BsaAI	YACGTR	1 cut(s)	1007
BsaBI	GATNNNNATC	2 cut(s)	455, 753
BsaI	GGTCTC	1 cut(s)	1564
BsaJI	CCNNGG	3 cut(s)	148, 877, 1413
BsaWI	WCCGGW	2 cut(s)	584, 1263
BsaXI	ACNNNNNCTCC	4 cut(s)	319, 349, 1561, 1591
Bsc4I	CCNNNNNNNGG	4 cut(s)	90, 1315, 1355, 1502
Bse118I	RCCGGY	1 cut(s)	1263
Bse1I	ACTGG	4 cut(s)	244, 375, 1384, 1400
Bse21I	CCTNAGG	1 cut(s)	87
Bse3DI	GCAATG	1 cut(s)	1334
Bse8I	GATNNNNATC	2 cut(s)	455, 753
BseBI	CCWGG	4 cut(s)	714, 996, 1310, 1353
BseDI	CCNNGG	3 cut(s)	148, 877, 1413
BseGI	GGATG	5 cut(s)	451, 559, 631, 1096, 1324
BseJI	GATNNNNATC	2 cut(s)	455, 753
BseLI	CCNNNNNNNGG	4 cut(s)	90, 1315, 1355, 1502
BseMI	GCAATG	1 cut(s)	1334
BseMII	CTCAG	6 cut(s)	65, 78, 179, 599, 612, 665
BseNI	ACTGG	4 cut(s)	244, 375, 1384, 1400
BseSI	GKGCMC	1 cut(s)	1423
BseXI	GCAGC	3 cut(s)	247, 275, 1438
BshFI	GGCC	5 cut(s)	14, 63, 132, 876, 917
BshNI	GGYRCC	2 cut(s)	1330, 1418
BshTI	ACCGGT	1 cut(s)	1263
BsiHKAI	GWGCWC	2 cut(s)	652, 1066
BsiSI	CCGG	6 cut(s)	59, 295, 585, 1264, 1480, 1575
BsiWI	CGTACG	1 cut(s)	250
BslFI	GGGAC	3 cut(s)	433, 1319, 1412
BslI	CCNNNNNNNGG	4 cut(s)	90, 1315, 1355, 1502
BsmAI	GTCTC	2 cut(s)	604, 1564
BsmFI	GGGAC	3 cut(s)	433, 1319, 1412
BsmI	GAATGC	1 cut(s)	788
BsnI	GGCC	5 cut(s)	14, 63, 132, 876, 917
Bso31I	GGTCTC	1 cut(s)	1564
Bsp119I	TTCGAA	2 cut(s)	380, 401
Bsp1286I	GDGCHC	3 cut(s)	652, 1066, 1423
Bsp143I	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
Bsp1720I	GCTNAGC	1 cut(s)	651
Bsp19I	CCATGG	1 cut(s)	148
BspACI	CCGC	2 cut(s)	1041, 1466
BspANI	GGCC	5 cut(s)	14, 63, 132, 876, 917
BspCNI	CTCAG	6 cut(s)	64, 79, 178, 600, 611, 664
BspHI	TCATGA	1 cut(s)	559
BspLI	GGNNCC	8 cut(s)	293, 486, 711, 916, 1307, 1332, 1360, 1420
BspMAI	CTGCAG	3 cut(s)	265, 1428, 1544
BspPI	GGATC	3 cut(s)	479, 492, 800
BspT104I	TTCGAA	2 cut(s)	380, 401
BspT107I	GGYRCC	2 cut(s)	1330, 1418
BspTI	CTTAAG	1 cut(s)	185
BspTNI	GGTCTC	1 cut(s)	1564
BsrDI	GCAATG	1 cut(s)	1334
BsrFI	RCCGGY	1 cut(s)	1263
BsrI	ACTGG	4 cut(s)	244, 375, 1384, 1400
BssAI	RCCGGY	1 cut(s)	1263
BssECI	CCNNGG	3 cut(s)	148, 877, 1413
BssMI	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
BssT1I	CCWWGG	2 cut(s)	148, 877
Bst2UI	CCWGG	4 cut(s)	714, 996, 1310, 1353
Bst4CI	ACNGT	8 cut(s)	20, 160, 270, 725, 931, 1255, 1293, 1537
Bst6I	CTCTTC	1 cut(s)	931
BstAFI	CTTAAG	1 cut(s)	185
BstBAI	YACGTR	1 cut(s)	1007
BstBI	TTCGAA	2 cut(s)	380, 401
BstC8I	GCNNGC	3 cut(s)	198, 1431, 1442
BstDEI	CTNAG	8 cut(s)	51, 87, 165, 302, 598, 608, 651, 1602
BstDSI	CCRYGG	2 cut(s)	148, 1413
BstF5I	GGATG	5 cut(s)	451, 559, 631, 1096, 1324
BstH2I	RGCGCY	1 cut(s)	302
BstHHI	GCGC	3 cut(s)	220, 301, 1079
BstKTI	GATC	7 cut(s)	6, 432, 453, 487, 541, 808, 1153
BstMAI	GTCTC	2 cut(s)	604, 1564
BstMBI	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
BstMWI	GCNNNNNNNGC	3 cut(s)	176, 923, 1083
BstNI	CCWGG	4 cut(s)	714, 996, 1310, 1353
BstNSI	RCATGY	1 cut(s)	1444
BstSCI	CCNGG	8 cut(s)	58, 294, 712, 994, 1308, 1351, 1479, 1573
BstSFI	CTRYAG	3 cut(s)	261, 1424, 1540
BstSLI	GKGCMC	1 cut(s)	1423
BstV1I	GCAGC	3 cut(s)	247, 275, 1438
BstV2I	GAAGAC	1 cut(s)	122
BstX2I	RGATCY	2 cut(s)	484, 805
BstYI	RGATCY	2 cut(s)	484, 805
Bsu36I	CCTNAGG	1 cut(s)	87
BsuRI	GGCC	5 cut(s)	14, 63, 132, 876, 917
BtgI	CCRYGG	2 cut(s)	148, 1413
BtsCI	GGATG	5 cut(s)	451, 559, 631, 1096, 1324
BtsI	GCAGTG	1 cut(s)	250
BtsIMutI	CAGTG	9 cut(s)	237, 250, 346, 466, 605, 606, 1201, 1393, 1488
Cac8I	GCNNGC	3 cut(s)	198, 1431, 1442
CciI	TCATGA	1 cut(s)	559
CfoI	GCGC	3 cut(s)	220, 301, 1079
Cfr10I	RCCGGY	1 cut(s)	1263
Cfr13I	GGNCC	4 cut(s)	61, 130, 915, 1306
CseI	GACGC	2 cut(s)	127, 554
Csp6I	GTAC	5 cut(s)	97, 251, 693, 1261, 1484
CspAI	ACCGGT	1 cut(s)	1263
CviQI	GTAC	5 cut(s)	97, 251, 693, 1261, 1484
DdeI	CTNAG	8 cut(s)	51, 87, 165, 302, 598, 608, 651, 1602
DpnI	GATC	7 cut(s)	5, 431, 452, 486, 540, 807, 1152
DpnII	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
DraI	TTTAAA	1 cut(s)	468
EaeI	YGGCCR	2 cut(s)	12, 874
Eam1104I	CTCTTC	1 cut(s)	931
EarI	CTCTTC	1 cut(s)	931
Eco130I	CCWWGG	2 cut(s)	148, 877
Eco31I	GGTCTC	1 cut(s)	1564
Eco47I	GGWCC	1 cut(s)	1306
Eco57I	CTGAAG	1 cut(s)	217
Eco81I	CCTNAGG	1 cut(s)	87
EcoO109I	RGGNCCY	2 cut(s)	915, 1306
EcoRII	CCWGG	4 cut(s)	712, 994, 1308, 1351
EcoT14I	CCWWGG	2 cut(s)	148, 877
ErhI	CCWWGG	2 cut(s)	148, 877
FalI	AAGNNNNNCTT	2 cut(s)	1017, 1049
FaqI	GGGAC	3 cut(s)	433, 1319, 1412
FbaI	TGATCA	2 cut(s)	3, 538
FblI	GTMKAC	1 cut(s)	594
Fnu4HI	GCNGC	3 cut(s)	261, 264, 1427
FokI	GGATG	5 cut(s)	458, 566, 638, 1103, 1331
Fsp4HI	GCNGC	3 cut(s)	261, 264, 1427
FspBI	CTAG	3 cut(s)	42, 176, 696
GlaI	GCGC	3 cut(s)	219, 300, 1078
GluI	GCNGC	3 cut(s)	261, 264, 1427
GsuI	CTGGAG	2 cut(s)	333, 1331
HaeII	RGCGCY	1 cut(s)	302
HaeIII	GGCC	5 cut(s)	14, 63, 132, 876, 917
HapII	CCGG	6 cut(s)	59, 295, 585, 1264, 1480, 1575
HgaI	GACGC	2 cut(s)	127, 554
HhaI	GCGC	3 cut(s)	220, 301, 1079
Hin6I	GCGC	3 cut(s)	218, 299, 1077
HinP1I	GCGC	3 cut(s)	218, 299, 1077
HindIII	AAGCTT	2 cut(s)	101, 638
HinfI	GANTC	4 cut(s)	754, 782, 1211, 1523
HpaII	CCGG	6 cut(s)	59, 295, 585, 1264, 1480, 1575
HphI	GGTGA	6 cut(s)	599, 731, 791, 1218, 1455, 1469
Hpy166II	GTNNAC	3 cut(s)	595, 1486, 1515
Hpy188I	TCNGA	4 cut(s)	863, 1155, 1237, 1585
Hpy188III	TCNNGA	6 cut(s)	67, 476, 542, 560, 904, 1283
Hpy8I	GTNNAC	3 cut(s)	595, 1486, 1515
Hpy99I	CGWCG	1 cut(s)	1344
HpyAV	CCTTC	3 cut(s)	135, 146, 409
HpyCH4III	ACNGT	8 cut(s)	20, 160, 270, 725, 931, 1255, 1293, 1537
HpyCH4IV	ACGT	3 cut(s)	253, 835, 1006
HpyF10VI	GCNNNNNNNGC	3 cut(s)	176, 923, 1083
HpyF3I	CTNAG	8 cut(s)	51, 87, 165, 302, 598, 608, 651, 1602
HpySE526I	ACGT	3 cut(s)	253, 835, 1006
HspAI	GCGC	3 cut(s)	218, 299, 1077
Ksp22I	TGATCA	2 cut(s)	3, 538
Kzo9I	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
LmnI	GCTCC	6 cut(s)	205, 291, 1083, 1140, 1364, 1438
Lsp1109I	GCAGC	3 cut(s)	247, 275, 1438
LweI	GCATC	3 cut(s)	15, 436, 1334
MaeI	CTAG	3 cut(s)	42, 176, 696
MaeII	ACGT	3 cut(s)	253, 835, 1006
MaeIII	GTNAC	8 cut(s)	160, 603, 680, 719, 836, 848, 1052, 1178
MalI	GATC	7 cut(s)	5, 431, 452, 486, 540, 807, 1152
MboI	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
MboII	GAAGA	7 cut(s)	127, 216, 424, 445, 948, 1130, 1160
MfeI	CAATTG	2 cut(s)	617, 978
MflI	RGATCY	2 cut(s)	484, 805
MhlI	GDGCHC	3 cut(s)	652, 1066, 1423
MluCI	AATT	7 cut(s)	469, 511, 617, 815, 978, 1231, 1609
MmeI	TCCRAC	3 cut(s)	610, 913, 1357
MroXI	GAANNNNTTC	1 cut(s)	1527
MseI	TTAA	5 cut(s)	186, 467, 801, 888, 1612
MslI	CAYNNNNRTG	1 cut(s)	747
MspA1I	CMGCKG	2 cut(s)	1468, 1606
MspCI	CTTAAG	1 cut(s)	185
MspI	CCGG	6 cut(s)	59, 295, 585, 1264, 1480, 1575
MspR9I	CCNGG	8 cut(s)	60, 296, 714, 996, 1310, 1353, 1481, 1575
MunI	CAATTG	2 cut(s)	617, 978
Mva1269I	GAATGC	1 cut(s)	788
MvaI	CCWGG	4 cut(s)	714, 996, 1310, 1353
MwoI	GCNNNNNNNGC	3 cut(s)	176, 923, 1083
NciI	CCSGG	4 cut(s)	60, 296, 1481, 1575
NcoI	CCATGG	1 cut(s)	148
NdeII	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
NlaIV	GGNNCC	8 cut(s)	293, 486, 711, 916, 1307, 1332, 1360, 1420
NmuCI	GTSAC	4 cut(s)	160, 603, 719, 1178
NspI	RCATGY	1 cut(s)	1444
NspV	TTCGAA	2 cut(s)	380, 401
PaeI	GCATGC	1 cut(s)	1444
PagI	TCATGA	1 cut(s)	559
PctI	GAATGC	1 cut(s)	788
PdmI	GAANNNNTTC	1 cut(s)	1527
PfeI	GAWTC	4 cut(s)	754, 782, 1211, 1523
Pfl23II	CGTACG	1 cut(s)	250
PflFI	GACNNNGTC	1 cut(s)	37
PinAI	ACCGGT	1 cut(s)	1263
PkrI	GCNGC	3 cut(s)	262, 265, 1428
Ppu21I	YACGTR	1 cut(s)	1007
PpuMI	RGGWCCY	1 cut(s)	1306
PsiI	TTATAA	1 cut(s)	660
Psp5II	RGGWCCY	1 cut(s)	1306
Psp6I	CCWGG	4 cut(s)	712, 994, 1308, 1351
PspGI	CCWGG	4 cut(s)	712, 994, 1308, 1351
PspLI	CGTACG	1 cut(s)	250
PspN4I	GGNNCC	8 cut(s)	293, 486, 711, 916, 1307, 1332, 1360, 1420
PspPI	GGNCC	4 cut(s)	61, 130, 915, 1306
PspPPI	RGGWCCY	1 cut(s)	1306
PstI	CTGCAG	3 cut(s)	265, 1428, 1544
PsuI	RGATCY	2 cut(s)	484, 805
PsyI	GACNNNGTC	1 cut(s)	37
PvuII	CAGCTG	1 cut(s)	1606
RsaI	GTAC	5 cut(s)	98, 252, 694, 1262, 1485
RsaNI	GTAC	5 cut(s)	97, 251, 693, 1261, 1484
RseI	CAYNNNNRTG	1 cut(s)	747
SaqAI	TTAA	5 cut(s)	186, 467, 801, 888, 1612
SatI	GCNGC	3 cut(s)	261, 264, 1427
Sau3AI	GATC	7 cut(s)	3, 429, 450, 484, 538, 805, 1150
Sau96I	GGNCC	4 cut(s)	61, 130, 915, 1306
ScrFI	CCNGG	8 cut(s)	60, 296, 714, 996, 1310, 1353, 1481, 1575
SduI	GDGCHC	3 cut(s)	652, 1066, 1423
SfaNI	GCATC	3 cut(s)	15, 436, 1334
SfcI	CTRYAG	3 cut(s)	261, 1424, 1540
SfuI	TTCGAA	2 cut(s)	380, 401
SinI	GGWCC	1 cut(s)	1306
SmiI	ATTTAAAT	1 cut(s)	468
SmiMI	CAYNNNNRTG	1 cut(s)	747
SmlI	CTYRAG	3 cut(s)	65, 185, 474
SmoI	CTYRAG	3 cut(s)	65, 185, 474
SpeI	ACTAGT	1 cut(s)	695
SphI	GCATGC	1 cut(s)	1444
Sse9I	AATT	7 cut(s)	469, 511, 617, 815, 978, 1231, 1609
SsiI	CCGC	2 cut(s)	1041, 1466
SspMI	CTAG	3 cut(s)	42, 176, 696
StyD4I	CCNGG	8 cut(s)	58, 294, 712, 994, 1308, 1351, 1479, 1573
StyI	CCWWGG	2 cut(s)	148, 877
SwaI	ATTTAAAT	1 cut(s)	468
TaaI	ACNGT	8 cut(s)	20, 160, 270, 725, 931, 1255, 1293, 1537
TaiI	ACGT	3 cut(s)	256, 838, 1009
TaqI	TCGA	4 cut(s)	227, 380, 401, 905
TaqII	GACCGA	1 cut(s)	1268
TasI	AATT	7 cut(s)	469, 511, 617, 815, 978, 1231, 1609
TatI	WGTACW	2 cut(s)	96, 692
TfiI	GAWTC	4 cut(s)	754, 782, 1211, 1523
Tru1I	TTAA	5 cut(s)	186, 467, 801, 888, 1612
Tru9I	TTAA	5 cut(s)	186, 467, 801, 888, 1612
TscAI	CASTG	9 cut(s)	244, 250, 346, 466, 606, 612, 1201, 1400, 1495
TseFI	GTSAC	4 cut(s)	160, 603, 719, 1178
TseI	GCWGC	3 cut(s)	260, 263, 1426
Tsp45I	GTSAC	4 cut(s)	160, 603, 719, 1178
TspDTI	ATGAA	3 cut(s)	445, 1203, 1212
TspGWI	ACGGA	1 cut(s)	1516
TspRI	CASTG	9 cut(s)	244, 250, 346, 466, 606, 612, 1201, 1400, 1495
Tth111I	GACNNNGTC	1 cut(s)	37
Vha464I	CTTAAG	1 cut(s)	185
VpaK11BI	GGWCC	1 cut(s)	1306
XapI	RAATTY	2 cut(s)	469, 1231
XceI	RCATGY	1 cut(s)	1444
XcmI	CCANNNNNNNNNTGG	1 cut(s)	861
XmiI	GTMKAC	1 cut(s)	594
XmnI	GAANNNNTTC	1 cut(s)	1527
XspI	CTAG	3 cut(s)	42, 176, 696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.