Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0007846

Physical Location & Seq

Genomic Coordinates Forward (+)

9798246 .. 9803386

Gene Structure 5141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g15710.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGATCAACACCGCCAACGGTATGATGTCGTCAACGGCTTCTTCGTCGGCGGCCAACAACAACGCCCAGTCGCCGGGGCTAAAGACCTATTTCAAGACCCCTGAGGGAAGGTACAAGCTTCAATACGAGAAGGCTCACCCTTCCGGCCTTCTTCACTACCCTCACGGCAAAACTGTCACTCAGGTAACGTTAGCGCATCTTAAGGACAAGCCTGCCCCAACAACCCCGACTGCACCATCTTCAAGCTTTAGTACTAGCAGTGGTGTACGGTCAGCTGCAGCAAGGTTGTTGGGTGCTAGTAATGGGAGCAGGCTTAGCTTTGTTGGAGGGAATGGTGTGAGTAAGAGTGTTAGCGCGAGTAGTAGAGTAGGGTCTTTGGTGGCTTCCAGTTCAAGTAATTCAACTTCTACTTCCAACTTTGATGGGAAAGGTTCTTACCTGATCTTCAATGTGGGAGATGCAATCTACATTAGTGATTTGAATACTCAAGACAAGGATCCAATAAAGTCTATACATTTCAGTAATTCGAATCCCGTGTGCCACGCATTTGATCAAGACGCCAAGGATGGTCATGATTTGGTTATTGGATTGAACTCTGGCGATGTCTACTCAGTGTCACTGAGACAACAATTACAAGATGTCGGAAAGAAGCTGGTTGGGGCTCAGCATTATAACAAAGATGGTTCTGTTAGTATTAGCCGTTGTACTAGTGTTGCATGGGTTCCTGGTGGTGATGGCTCTTTTGTTGTTGCTCATGCTGATGGGAATCTGTATGTATATGAAAAGAGCAAAGATGGTGCAGGCGATACTTCATTCCCTGTTATAAAGGATCAAGCTCAATTTTCTGTTGCACATGCACGTTACAGTAAGAGTAACCCAATTGCCAGATGGCATATATGCCTAGGTTCAATCAATAGTATTGCTTTTTCAACTGATGGAGCGTATTTAGCAACTGTTGGAAGAGACGGTTATCTACGTGTTTTTGACTACTCAAAAGAGCAGCTTATATGTGGGGGGAAAAGTTACTATGGTGCTCAGCTATGTTGTGCTTGGAGCATGGATGGAAAATACATACTGGCAGGAGGTGAAGATGATCTGGTTCAAGTTTGGAGTATGGAAGATCGGAAAGTTGTAGCATGGGGAGAGGGGCACAATTCTTGGGTCAGTGGCGTGGCGTTTGATCCATATTGGTCATCACCAAATTCAGAAGGTATCGGGGAAACTGTCATGTACCGGTTTGGTTCAGTTGGTCAGGACACACAATTACTTCTGTGGGACCTGGAAATGGATGAGATTGTGGTGCCATTGCGCCGATGCCCTCCAGGTGGTTCCCCCACATATAGTACTGGAAGCCAATCATCTCATTGGGACAATGCACTACCAGTGGGTACGTTGCAGCCTGCTCCAAGCATGCGAGATGTTCTAAAGATCTCACCTCTTGTTGCTCATCGTGTGCACACTGAACCTCTCTCTGGCGTTTTGTTTACTCAAGAATCAGTTCTTACTGTCTGCCGTGAAGGGAATATTAAAATTTGGATGAGACCTGGGGTTTCAGAAAGCCAATCAAGCAACGGGGAAACTGTGTTAAGTCCCAGCTTGAAGGAGAAGCCTTTGCTGTCAAGCAAGGTTGCCAGTACCAATCTTAAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006355 GO:0007154 GO:0007584 GO:0008150 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0042221 GO:0045013 GO:0045892 GO:0045934 GO:0045990 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061984 GO:0061985 GO:0065007 GO:0070887 GO:0071496 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

551

Amino Acids

58.84

Weight (kDa)

7.23

Isoelectric Point (pI)

37.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_Nup120_160	PF11715	157 - 337	3.7e-06	Nucleoporin Nup120/160, beta-propeller domain
WD40_Prp19	PF24814	236 - 393	3.6e-08	Prp19 WD40 domain
WDR55	PF24796	294 - 394	1.1e-06	WDR55
Beta-prop_TEP1_2nd	PF25047	302 - 392	7e-08	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	303 - 399	3.7e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	303 - 395	8.6e-09	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	307 - 395	1e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_THOC3	PF25174	348 - 395	8.2e-07	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007846)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37160 AT2G37160
fragaria_vesca	FvH4_3g32650 FvH4_6g15710 FvH4_6g15710 FvH4_6g15710 FvH4_6g15710
malus_domestica	MD03G1114500.v1.1 MD11G1133300.v1.1
prunus_persica	Prupe.6G099500_v2.0.a1 Prupe.6G099500_v2.0.a1 Prupe.6G099500_v2.0.a1 Prupe.6G238200_v2.0.a1
pyrus_communis	pycom11g11000
rosa_chinensis	RchiOBHm_Chr5g0059721
rosa_laevigata	RLG00000035323
rosa_multiflora	Rmu_sc0000660.1_g000042
rosa_roxburghii	Rroxscaffold_1G00020890
rosa_rugosa	Rorug05G0324500
rosa_samantha	Rh5AG389900 Rh5BG401500 Rh5CG425600 Rh5DG417900
rosa_wichuraiana	Rw5G036690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	672, 824
AccB1I	GGYRCC	1 cut(s)	1300
AccI	GTMKAC	1 cut(s)	606
AccII	CGCG	1 cut(s)	356
AciI	CCGC	2 cut(s)	12, 50
AclI	AACGTT	1 cut(s)	188
AclWI	GGATC	4 cut(s)	491, 504, 837, 1175
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	2 cut(s)	1201, 1530
AcyI	GRCGYC	1 cut(s)	558
AfaI	GTAC	8 cut(s)	113, 253, 267, 706, 1232, 1345, 1390, 1636
AfiI	CCNNNNNNNGG	4 cut(s)	73, 1285, 1325, 1472
AflII	CTTAAG	2 cut(s)	200, 1643
AflIII	ACRYGT	1 cut(s)	976
AgeI	ACCGGT	1 cut(s)	1233
AhlI	ACTAGT	1 cut(s)	707
AjnI	CCWGG	4 cut(s)	724, 1278, 1321, 1543
AluBI	AGCT	9 cut(s)	118, 246, 275, 318, 652, 836, 1003, 1039, 1596
AluI	AGCT	9 cut(s)	118, 246, 275, 318, 652, 836, 1003, 1039, 1596
Alw21I	GWGCWC	2 cut(s)	1036, 1458
Alw26I	GTCTC	3 cut(s)	616, 957, 1534
Alw44I	GTGCAC	1 cut(s)	1454
AlwI	GGATC	4 cut(s)	491, 504, 837, 1175
AoxI	GGCC	2 cut(s)	51, 145
ApaLI	GTGCAC	1 cut(s)	1454
ApeKI	GCWGC	4 cut(s)	275, 278, 1000, 1396
ApoI	RAATTY	2 cut(s)	1201, 1530
AsiGI	ACCGGT	1 cut(s)	1233
Asp700I	GAANNNNTTC	1 cut(s)	1497
AspA2I	CCTAGG	1 cut(s)	901
AspLEI	GCGC	3 cut(s)	196, 356, 1311
AspS9I	GGNCC	1 cut(s)	1276
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	5 cut(s)	128, 743, 1097, 1188, 1425
AsuII	TTCGAA	1 cut(s)	527
AvaII	GGWCC	1 cut(s)	1276
AvrII	CCTAGG	1 cut(s)	901
AxyI	CCTNAGG	1 cut(s)	102
BaeGI	GKGCMC	2 cut(s)	1152, 1458
BamHI	GGATCC	1 cut(s)	496
BanI	GGYRCC	1 cut(s)	1300
BanII	GRGCYC	1 cut(s)	664
BarI	GAAGNNNNNNTAC	2 cut(s)	388, 420
Bbv12I	GWGCWC	2 cut(s)	1036, 1458
BbvI	GCAGC	4 cut(s)	262, 290, 1012, 1408
BceAI	ACGGC	4 cut(s)	51, 181, 684, 1497
BciT130I	CCWGG	4 cut(s)	726, 1280, 1323, 1545
BclI	TGATCA	2 cut(s)	3, 550
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	3 cut(s)	616, 957, 1534
BcuI	ACTAGT	1 cut(s)	707
BfaI	CTAG	4 cut(s)	255, 297, 708, 902
BfmI	CTRYAG	1 cut(s)	276
BfrI	CTTAAG	2 cut(s)	200, 1643
BglII	AGATCT	1 cut(s)	1428
BisI	GCNGC	5 cut(s)	51, 276, 279, 1001, 1397
BlnI	CCTAGG	1 cut(s)	901
BlpI	GCTNAGC	3 cut(s)	314, 663, 1035
BlsI	GCNGC	5 cut(s)	52, 277, 280, 1002, 1398
BmcAI	AGTACT	2 cut(s)	253, 1345
Bme1390I	CCNGG	5 cut(s)	75, 726, 1280, 1323, 1545
Bme18I	GGWCC	1 cut(s)	1276
BmgT120I	GGNCC	1 cut(s)	1276
BmiI	GGNNCC	5 cut(s)	498, 723, 1277, 1302, 1330
BmrFI	CCNGG	5 cut(s)	75, 726, 1280, 1323, 1545
BmrI	ACTGGG	1 cut(s)	61
BmsI	GCATC	3 cut(s)	205, 448, 1304
BmuI	ACTGGG	1 cut(s)	61
BpmI	CTGGAG	1 cut(s)	1305
Bpu1102I	GCTNAGC	3 cut(s)	314, 663, 1035
Bpu14I	TTCGAA	1 cut(s)	527
BpuEI	CTTGAG	2 cut(s)	471, 1473
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	977
BsaBI	GATNNNNATC	1 cut(s)	765
BsaHI	GRCGYC	1 cut(s)	558
BsaI	GGTCTC	1 cut(s)	1534
BsaJI	CCNNGG	4 cut(s)	74, 561, 901, 1544
BsaWI	WCCGGW	1 cut(s)	1233
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 1285, 1325, 1472
Bse118I	RCCGGY	1 cut(s)	1233
Bse1I	ACTGG	6 cut(s)	67, 387, 1080, 1351, 1382, 1632
Bse21I	CCTNAGG	1 cut(s)	102
Bse3DI	GCAATG	1 cut(s)	1304
Bse8I	GATNNNNATC	1 cut(s)	765
BseBI	CCWGG	4 cut(s)	726, 1280, 1323, 1545
BseDI	CCNNGG	4 cut(s)	74, 561, 901, 1544
BseGI	GGATG	4 cut(s)	571, 1066, 1294, 1542
BseJI	GATNNNNATC	1 cut(s)	765
BseLI	CCNNNNNNNGG	4 cut(s)	73, 1285, 1325, 1472
BseMI	GCAATG	1 cut(s)	1304
BseMII	CTCAG	6 cut(s)	93, 194, 611, 624, 677, 1049
BseNI	ACTGG	6 cut(s)	67, 387, 1080, 1351, 1382, 1632
BseSI	GKGCMC	2 cut(s)	1152, 1458
BseXI	GCAGC	4 cut(s)	262, 290, 1012, 1408
BseYI	CCCAGC	1 cut(s)	1592
BsgI	GTGCAG	2 cut(s)	216, 819
Bsh1236I	CGCG	1 cut(s)	356
BshFI	GGCC	2 cut(s)	53, 147
BshNI	GGYRCC	1 cut(s)	1300
BshTI	ACCGGT	1 cut(s)	1233
BsiHKAI	GWGCWC	2 cut(s)	1036, 1458
BsiSI	CCGG	3 cut(s)	74, 144, 1234
BslFI	GGGAC	3 cut(s)	1289, 1382, 1575
BslI	CCNNNNNNNGG	4 cut(s)	73, 1285, 1325, 1472
BsmAI	GTCTC	3 cut(s)	616, 957, 1534
BsmBI	CGTCTC	1 cut(s)	957
BsmFI	GGGAC	3 cut(s)	1289, 1382, 1575
BsnI	GGCC	2 cut(s)	53, 147
Bso31I	GGTCTC	1 cut(s)	1534
Bsp119I	TTCGAA	1 cut(s)	527
Bsp1286I	GDGCHC	4 cut(s)	664, 1036, 1152, 1458
Bsp143I	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
Bsp1720I	GCTNAGC	3 cut(s)	314, 663, 1035
BspACI	CCGC	2 cut(s)	12, 50
BspANI	GGCC	2 cut(s)	53, 147
BspCNI	CTCAG	6 cut(s)	94, 193, 612, 623, 676, 1048
BspFNI	CGCG	1 cut(s)	356
BspHI	TCATGA	1 cut(s)	571
BspLI	GGNNCC	5 cut(s)	498, 723, 1277, 1302, 1330
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	4 cut(s)	491, 504, 837, 1175
BspT104I	TTCGAA	1 cut(s)	527
BspT107I	GGYRCC	1 cut(s)	1300
BspTI	CTTAAG	2 cut(s)	200, 1643
BspTNI	GGTCTC	1 cut(s)	1534
BsrDI	GCAATG	1 cut(s)	1304
BsrFI	RCCGGY	1 cut(s)	1233
BsrI	ACTGG	6 cut(s)	67, 387, 1080, 1351, 1382, 1632
BssAI	RCCGGY	1 cut(s)	1233
BssECI	CCNNGG	4 cut(s)	74, 561, 901, 1544
BssMI	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
BssNI	GRCGYC	1 cut(s)	558
BssT1I	CCWWGG	2 cut(s)	561, 901
Bst2UI	CCWGG	4 cut(s)	726, 1280, 1323, 1545
Bst4CI	ACNGT	9 cut(s)	20, 175, 270, 866, 955, 968, 1225, 1507, 1582
Bst6I	CTCTTC	1 cut(s)	955
BstACI	GRCGYC	1 cut(s)	558
BstAFI	CTTAAG	2 cut(s)	200, 1643
BstBAI	YACGTR	1 cut(s)	977
BstBI	TTCGAA	1 cut(s)	527
BstC8I	GCNNGC	5 cut(s)	213, 311, 802, 1401, 1412
BstDEI	CTNAG	7 cut(s)	102, 180, 314, 610, 620, 663, 1035
BstF5I	GGATG	4 cut(s)	571, 1066, 1294, 1542
BstFNI	CGCG	1 cut(s)	356
BstHHI	GCGC	3 cut(s)	196, 356, 1311
BstKTI	GATC	9 cut(s)	6, 444, 499, 553, 832, 1096, 1123, 1183, 1431
BstMAI	GTCTC	3 cut(s)	616, 957, 1534
BstMBI	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
BstMWI	GCNNNNNNNGC	3 cut(s)	315, 947, 1566
BstNI	CCWGG	4 cut(s)	726, 1280, 1323, 1545
BstNSI	RCATGY	2 cut(s)	857, 1414
BstSCI	CCNGG	5 cut(s)	73, 724, 1278, 1321, 1543
BstSFI	CTRYAG	1 cut(s)	276
BstSLI	GKGCMC	2 cut(s)	1152, 1458
BstUI	CGCG	1 cut(s)	356
BstV1I	GCAGC	4 cut(s)	262, 290, 1012, 1408
BstX2I	RGATCY	2 cut(s)	496, 1428
BstYI	RGATCY	2 cut(s)	496, 1428
Bsu36I	CCTNAGG	1 cut(s)	102
BsuRI	GGCC	2 cut(s)	53, 147
BtgZI	GCGATG	1 cut(s)	615
BtsCI	GGATG	4 cut(s)	571, 1066, 1294, 1542
BtsI	GCAGTG	1 cut(s)	265
BtsIMutI	CAGTG	6 cut(s)	265, 617, 618, 1171, 1389, 1458
Cac8I	GCNNGC	5 cut(s)	213, 311, 802, 1401, 1412
CciI	TCATGA	1 cut(s)	571
CfoI	GCGC	3 cut(s)	196, 356, 1311
Cfr10I	RCCGGY	1 cut(s)	1233
Cfr13I	GGNCC	1 cut(s)	1276
CseI	GACGC	1 cut(s)	566
Csp6I	GTAC	8 cut(s)	112, 252, 266, 705, 1231, 1344, 1389, 1635
CspAI	ACCGGT	1 cut(s)	1233
CviAII	CATG	8 cut(s)	572, 717, 755, 854, 1057, 1137, 1228, 1411
CviQI	GTAC	8 cut(s)	112, 252, 266, 705, 1231, 1344, 1389, 1635
DdeI	CTNAG	7 cut(s)	102, 180, 314, 610, 620, 663, 1035
DpnI	GATC	9 cut(s)	5, 443, 498, 552, 831, 1095, 1122, 1182, 1430
DpnII	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	1 cut(s)	955
EarI	CTCTTC	1 cut(s)	955
Eco130I	CCWWGG	2 cut(s)	561, 901
Eco24I	GRGCYC	1 cut(s)	664
Eco31I	GGTCTC	1 cut(s)	1534
Eco47I	GGWCC	1 cut(s)	1276
Eco81I	CCTNAGG	1 cut(s)	102
EcoO109I	RGGNCCY	1 cut(s)	1276
EcoRII	CCWGG	4 cut(s)	724, 1278, 1321, 1543
EcoT14I	CCWWGG	2 cut(s)	561, 901
EcoT38I	GRGCYC	1 cut(s)	664
ErhI	CCWWGG	2 cut(s)	561, 901
Esp3I	CGTCTC	1 cut(s)	957
FaeI	CATG	8 cut(s)	575, 720, 758, 857, 1060, 1140, 1231, 1414
FalI	AAGNNNNNCTT	2 cut(s)	987, 1019
FaqI	GGGAC	3 cut(s)	1289, 1382, 1575
FatI	CATG	8 cut(s)	571, 716, 754, 853, 1056, 1136, 1227, 1410
FbaI	TGATCA	2 cut(s)	3, 550
FblI	GTMKAC	1 cut(s)	606
Fnu4HI	GCNGC	5 cut(s)	51, 276, 279, 1001, 1397
FokI	GGATG	4 cut(s)	578, 1073, 1301, 1549
FriOI	GRGCYC	1 cut(s)	664
Fsp4HI	GCNGC	5 cut(s)	51, 276, 279, 1001, 1397
FspBI	CTAG	4 cut(s)	255, 297, 708, 902
GlaI	GCGC	3 cut(s)	195, 355, 1310
GluI	GCNGC	5 cut(s)	51, 276, 279, 1001, 1397
GsaI	CCCAGC	1 cut(s)	1596
GsuI	CTGGAG	1 cut(s)	1305
HaeIII	GGCC	2 cut(s)	53, 147
HapII	CCGG	3 cut(s)	74, 144, 1234
HgaI	GACGC	1 cut(s)	566
HhaI	GCGC	3 cut(s)	196, 356, 1311
Hin1I	GRCGYC	1 cut(s)	558
Hin1II	CATG	8 cut(s)	575, 720, 758, 857, 1060, 1140, 1231, 1414
Hin6I	GCGC	3 cut(s)	194, 354, 1309
HinP1I	GCGC	3 cut(s)	194, 354, 1309
HincII	GTYRAC	1 cut(s)	33
HindII	GTYRAC	1 cut(s)	33
HindIII	AAGCTT	2 cut(s)	116, 244
HinfI	GANTC	3 cut(s)	529, 766, 1493
HpaII	CCGG	3 cut(s)	74, 144, 1234
HphI	GGTGA	5 cut(s)	128, 743, 1097, 1188, 1425
Hpy166II	GTNNAC	5 cut(s)	33, 266, 607, 1456, 1485
Hpy188I	TCNGA	4 cut(s)	644, 1125, 1207, 1555
Hpy188III	TCNNGA	6 cut(s)	94, 488, 554, 572, 1253, 1490
Hpy8I	GTNNAC	5 cut(s)	33, 266, 607, 1456, 1485
Hpy99I	CGWCG	1 cut(s)	49
HpyAV	CCTTC	7 cut(s)	102, 124, 150, 158, 1202, 1511, 1594
HpyCH4III	ACNGT	9 cut(s)	20, 175, 270, 866, 955, 968, 1225, 1507, 1582
HpyCH4IV	ACGT	4 cut(s)	188, 859, 976, 1391
HpyF10VI	GCNNNNNNNGC	3 cut(s)	315, 947, 1566
HpyF3I	CTNAG	7 cut(s)	102, 180, 314, 610, 620, 663, 1035
HpySE526I	ACGT	4 cut(s)	188, 859, 976, 1391
Hsp92I	GRCGYC	1 cut(s)	558
Hsp92II	CATG	8 cut(s)	575, 720, 758, 857, 1060, 1140, 1231, 1414
HspAI	GCGC	3 cut(s)	194, 354, 1309
Ksp22I	TGATCA	2 cut(s)	3, 550
Kzo9I	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
LmnI	GCTCC	4 cut(s)	306, 938, 1053, 1408
Lsp1109I	GCAGC	4 cut(s)	262, 290, 1012, 1408
LweI	GCATC	3 cut(s)	205, 448, 1304
MaeI	CTAG	4 cut(s)	255, 297, 708, 902
MaeII	ACGT	4 cut(s)	188, 859, 976, 1391
MaeIII	GTNAC	6 cut(s)	175, 184, 615, 860, 872, 1022
MalI	GATC	9 cut(s)	5, 443, 498, 552, 831, 1095, 1122, 1182, 1430
MboI	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
MboII	GAAGA	7 cut(s)	33, 143, 231, 436, 972, 1100, 1130
MfeI	CAATTG	1 cut(s)	879
MflI	RGATCY	2 cut(s)	496, 1428
MhlI	GDGCHC	4 cut(s)	664, 1036, 1152, 1458
MluCI	AATT	9 cut(s)	397, 523, 629, 839, 879, 1153, 1201, 1262, 1530
MmeI	TCCRAC	4 cut(s)	304, 438, 622, 937
MnlI	CCTC	8 cut(s)	97, 171, 320, 1076, 1138, 1329, 1446, 1476
MroXI	GAANNNNTTC	1 cut(s)	1497
MseI	TTAA	4 cut(s)	201, 1527, 1586, 1644
MslI	CAYNNNNRTG	1 cut(s)	759
MspA1I	CMGCKG	1 cut(s)	275
MspCI	CTTAAG	2 cut(s)	200, 1643
MspI	CCGG	3 cut(s)	74, 144, 1234
MspR9I	CCNGG	5 cut(s)	75, 726, 1280, 1323, 1545
MunI	CAATTG	1 cut(s)	879
MvaI	CCWGG	4 cut(s)	726, 1280, 1323, 1545
MvnI	CGCG	1 cut(s)	356
MwoI	GCNNNNNNNGC	3 cut(s)	315, 947, 1566
NciI	CCSGG	1 cut(s)	75
NdeII	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
NlaIII	CATG	8 cut(s)	575, 720, 758, 857, 1060, 1140, 1231, 1414
NlaIV	GGNNCC	5 cut(s)	498, 723, 1277, 1302, 1330
NmuCI	GTSAC	2 cut(s)	175, 615
NspI	RCATGY	2 cut(s)	857, 1414
NspV	TTCGAA	1 cut(s)	527
PaeI	GCATGC	1 cut(s)	1414
PagI	TCATGA	1 cut(s)	571
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PdmI	GAANNNNTTC	1 cut(s)	1497
PfeI	GAWTC	3 cut(s)	529, 766, 1493
PinAI	ACCGGT	1 cut(s)	1233
PkrI	GCNGC	5 cut(s)	52, 277, 280, 1002, 1398
Ppu21I	YACGTR	1 cut(s)	977
PpuMI	RGGWCCY	1 cut(s)	1276
PsiI	TTATAA	2 cut(s)	672, 824
Psp1406I	AACGTT	1 cut(s)	188
Psp5II	RGGWCCY	1 cut(s)	1276
Psp6I	CCWGG	4 cut(s)	724, 1278, 1321, 1543
PspFI	CCCAGC	1 cut(s)	1592
PspGI	CCWGG	4 cut(s)	724, 1278, 1321, 1543
PspN4I	GGNNCC	5 cut(s)	498, 723, 1277, 1302, 1330
PspPI	GGNCC	1 cut(s)	1276
PspPPI	RGGWCCY	1 cut(s)	1276
PstI	CTGCAG	1 cut(s)	280
PsuI	RGATCY	2 cut(s)	496, 1428
PvuII	CAGCTG	1 cut(s)	275
RsaI	GTAC	8 cut(s)	113, 253, 267, 706, 1232, 1345, 1390, 1636
RsaNI	GTAC	8 cut(s)	112, 252, 266, 705, 1231, 1344, 1389, 1635
RseI	CAYNNNNRTG	1 cut(s)	759
SaqAI	TTAA	4 cut(s)	201, 1527, 1586, 1644
SatI	GCNGC	5 cut(s)	51, 276, 279, 1001, 1397
Sau3AI	GATC	9 cut(s)	3, 441, 496, 550, 829, 1093, 1120, 1180, 1428
Sau96I	GGNCC	1 cut(s)	1276
ScaI	AGTACT	2 cut(s)	253, 1345
ScrFI	CCNGG	5 cut(s)	75, 726, 1280, 1323, 1545
SduI	GDGCHC	4 cut(s)	664, 1036, 1152, 1458
SfaNI	GCATC	3 cut(s)	205, 448, 1304
SfcI	CTRYAG	1 cut(s)	276
SfuI	TTCGAA	1 cut(s)	527
SinI	GGWCC	1 cut(s)	1276
SmiMI	CAYNNNNRTG	1 cut(s)	759
SmlI	CTYRAG	4 cut(s)	200, 486, 1488, 1643
SmoI	CTYRAG	4 cut(s)	200, 486, 1488, 1643
SpeI	ACTAGT	1 cut(s)	707
SphI	GCATGC	1 cut(s)	1414
Sse9I	AATT	9 cut(s)	397, 523, 629, 839, 879, 1153, 1201, 1262, 1530
SsiI	CCGC	2 cut(s)	12, 50
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	4 cut(s)	255, 297, 708, 902
StyD4I	CCNGG	5 cut(s)	73, 724, 1278, 1321, 1543
StyI	CCWWGG	2 cut(s)	561, 901
TaaI	ACNGT	9 cut(s)	20, 175, 270, 866, 955, 968, 1225, 1507, 1582
TaiI	ACGT	4 cut(s)	191, 862, 979, 1394
TaqI	TCGA	1 cut(s)	527
TasI	AATT	9 cut(s)	397, 523, 629, 839, 879, 1153, 1201, 1262, 1530
TatI	WGTACW	3 cut(s)	251, 704, 1343
TauI	GCSGC	1 cut(s)	53
TfiI	GAWTC	3 cut(s)	529, 766, 1493
Tru1I	TTAA	4 cut(s)	201, 1527, 1586, 1644
Tru9I	TTAA	4 cut(s)	201, 1527, 1586, 1644
TscAI	CASTG	6 cut(s)	265, 618, 624, 1171, 1389, 1465
TseFI	GTSAC	2 cut(s)	175, 615
TseI	GCWGC	4 cut(s)	275, 278, 1000, 1396
Tsp45I	GTSAC	2 cut(s)	175, 615
TspDTI	ATGAA	2 cut(s)	795, 801
TspRI	CASTG	6 cut(s)	265, 618, 624, 1171, 1389, 1465
Vha464I	CTTAAG	2 cut(s)	200, 1643
VneI	GTGCAC	1 cut(s)	1454
VpaK11BI	GGWCC	1 cut(s)	1276
XapI	RAATTY	2 cut(s)	1201, 1530
XceI	RCATGY	2 cut(s)	857, 1414
XcmI	CCANNNNNNNNNTGG	1 cut(s)	885
XmaJI	CCTAGG	1 cut(s)	901
XmiI	GTMKAC	1 cut(s)	606
XmnI	GAANNNNTTC	1 cut(s)	1497
XspI	CTAG	4 cut(s)	255, 297, 708, 902
ZrmI	AGTACT	2 cut(s)	253, 1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.