Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007846

Physical Location & Seq

Genomic Coordinates Forward (+)

25471624 .. 25475500

Gene Structure 3877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00020890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGTACATGAACAACGGTTACAGCAGCGCCAGCACCAAAAACGGCGTCAATCTAACGTCGTCGTCGGCGGCGGCAGCGACGACATCGGGCGCAACGACGTCGTCGTCCGGTGCGCAAACCCAGTCCCTGATAAAGGCGTATTTCAAGACCCCGGAGGGGCGGTACAAGCTGCACTCGGAGAAGACGCGGCCGGCGAATCTGCTGCCCTATTCGTACGCCAAGACAATCTCGCAGGTCACGCTAGCCCAGCTGAAGGAGAGGCCCAACCAGGCGGCGCCGGGGCCGGTCCCCGGGAACATCGCCAGCGGGAGTGTGCGCCACGCGGCGGCGAGGCTGTTGGGGGTGGGGGCTGGAAATGGGAGCAAGGCGCTTAGTTATTTGGGCGGTGGGAGTAGTAAGACGAGTAATGGAAGTAGTAGGAGTGCTCATTTTGGAGGACTAGGGTCCAATGGGTATGGGGCCCATTCGTCGCCGACTTCGAGTCACGGCGGTAAAGGGTCGTTCTTGGTGTTCAATGTTGGAGATACTATCTATATTTGCGATCTCAATTCGCCAGATAAGGATCCTATTAAAGCGTTGCATTTTAGTAATTCGAATCCGGTGTGTCACGCGTTTGATTCGGAAGCCAAGGATGGGCATGACTTGCTTATTGGATTGAGCTCTGGAGATGTTTATTCAGCCTCTTTGAGACAGCAATTGCAAGATTCTGGGAAGAAGCTTGTTGGTGCCCTTCATTATAACAAAGAGGGTTCTGTTAATACCAGGCAAGTAGATAAAACATTAGAACTTACTGCAGAAGTGGAGTTGAAGTTCCATGTACCAGTTGTTTATAACAGTCGCTGTACCAGTATTGCATGGGTTCCCAAAGGCAATGGTACTTTTATTGCTGGTCATGCTGATGGAAACTTGTACGAGTATGAGAAGGGCAAGGATAGTACCGGTGATACTTCTTTCCCAGTTATAAAGGATCCTGCTCAGTTTTCAGTGTATCATGCAAGATCCAGTAAGAGTAATCCAATTTCCAGATGGCATATTTGTGAAGGTTCAATAAACAGCATTGTTTACTCTCCAGATGGGACGTATTTGGCTACAGTTGGTAGAGATGGTAGTTGTCAAACTGTTAGGCTTGTGATTTTTATGGTTAGTGGTGTGGCTTTTGACTCGCATTGGTCATCACCAACTTCGGATGGCACAGAAGAAAATCTTGTTTATCGCTTTGGCTCTGTTGGTCAGGACACAAAACTACTCCTGTGGGAACTCTCCATGGATGAGATTGTAGTGCCGCTTCGCCGGTGTTCAGTTGGTGGCTCTCCAACATTCAGCACTGGTAGCCAGTCATCCCATTGGGACAGCAGTTACCCGGTTGGCACTCTCCAACCTGCTCCAAGCATGCGGGATGTTCCCAAGCTCTCCCCACTAGTGGCTCACTGTGTTCACACCGAGCCCCTGTCTAGTTTAGCTTTTACCCAGGAAGCTATTCTCACTGCATCTTGGGAAGGGCATGTAAAAATTTGGATGAGACCAGGCGAACCCGAAACTAAATCCACCAACTCAGAAGCTCTGCCAGGTGCTAGTTTGAGGGACCAACTACCACCGACAGGAAAAAGTTACTCAGAATCATTAAGGGGTTACCCGTTGCCTGAAAGTAAATCAAACAACTCACAAGCTCTTCTAGGTGCTAGTTCAAAGGAGCAACAGCCATCGACGGGCAAAGGTGGTGCCTTTAGTTATAAAGACTTCTCAAAAACCAACCGATACCTTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

588

Amino Acids

62.52

Weight (kDa)

8.7

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007846)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37160 AT2G37160
fragaria_vesca	FvH4_3g32650 FvH4_6g15710 FvH4_6g15710 FvH4_6g15710 FvH4_6g15710
malus_domestica	MD03G1114500.v1.1 MD11G1133300.v1.1
prunus_persica	Prupe.6G099500_v2.0.a1 Prupe.6G099500_v2.0.a1 Prupe.6G099500_v2.0.a1 Prupe.6G238200_v2.0.a1
pyrus_communis	pycom11g11000
rosa_chinensis	RchiOBHm_Chr5g0059721
rosa_laevigata	RLG00000035323
rosa_multiflora	Rmu_sc0000660.1_g000042
rosa_roxburghii	Rroxscaffold_1G00020890
rosa_rugosa	Rorug05G0324500
rosa_samantha	Rh5AG389900 Rh5BG401500 Rh5CG425600 Rh5DG417900
rosa_wichuraiana	Rw5G036690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	738, 831, 962, 1731
AasI	GACNNNNNNGTC	1 cut(s)	103
AatII	GACGTC	1 cut(s)	101
Acc16I	TGCGCA	1 cut(s)	114
Acc36I	ACCTGC	2 cut(s)	223, 1387
AccB1I	GGYRCC	3 cut(s)	274, 725, 1718
AccII	CGCG	3 cut(s)	187, 323, 611
AclWI	GGATC	5 cut(s)	557, 570, 962, 975, 993
AcoI	YGGCCR	1 cut(s)	188
AcsI	RAATTY	1 cut(s)	1509
AcuI	CTGAAG	1 cut(s)	272
AcyI	GRCGYC	3 cut(s)	45, 98, 275
AfaI	GTAC	8 cut(s)	5, 164, 215, 819, 844, 877, 911, 937
AfiI	CCNNNNNNNGG	9 cut(s)	133, 156, 253, 290, 325, 633, 1420, 1598, 1706
AflIII	ACRYGT	1 cut(s)	609
AgeI	ACCGGT	1 cut(s)	938
AgsI	TTSAA	5 cut(s)	145, 514, 808, 1047, 1686
AhdI	GACNNNNNGTC	1 cut(s)	480
AhlI	ACTAGT	1 cut(s)	1417
AjnI	CCWGG	5 cut(s)	267, 761, 1467, 1522, 1564
AloI	GAACNNNNNNTCC	2 cut(s)	794, 826
AluBI	AGCT	9 cut(s)	169, 250, 660, 718, 1408, 1460, 1475, 1559, 1667
AluI	AGCT	9 cut(s)	169, 250, 660, 718, 1408, 1460, 1475, 1559, 1667
Alw21I	GWGCWC	2 cut(s)	427, 662
Alw26I	GTCTC	2 cut(s)	682, 1513
AlwI	GGATC	5 cut(s)	557, 570, 962, 975, 993
AlwNI	CAGNNNCTG	2 cut(s)	127, 840
Ama87I	CYCGRG	1 cut(s)	290
AoxI	GGCC	4 cut(s)	188, 260, 281, 459
ApaI	GGGCCC	1 cut(s)	463
ApeKI	GCWGC	4 cut(s)	24, 74, 169, 202
ApoI	RAATTY	1 cut(s)	1509
ArsI	GACNNNNNNTTYG	2 cut(s)	30, 62
AsiGI	ACCGGT	1 cut(s)	938
Asp700I	GAANNNNTTC	1 cut(s)	1476
AspLEI	GCGC	6 cut(s)	29, 92, 115, 277, 318, 370
AspS9I	GGNCC	7 cut(s)	261, 281, 286, 444, 459, 460, 1582
AsuC2I	CCSGG	5 cut(s)	152, 279, 291, 292, 1361
AsuHPI	GGTGA	2 cut(s)	953, 1167
AsuII	TTCGAA	1 cut(s)	593
AsuNHI	GCTAGC	1 cut(s)	241
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	3 cut(s)	286, 444, 1582
BaeGI	GKGCMC	2 cut(s)	463, 730
BamHI	GGATCC	2 cut(s)	562, 967
BanI	GGYRCC	3 cut(s)	274, 725, 1718
BanII	GRGCYC	3 cut(s)	463, 662, 1446
BarI	GAAGNNNNNNTAC	2 cut(s)	1269, 1301
BbsI	GAAGAC	1 cut(s)	188
Bbv12I	GWGCWC	2 cut(s)	427, 662
BbvI	GCAGC	4 cut(s)	36, 86, 156, 189
BccI	CCATC	7 cut(s)	626, 893, 1020, 1067, 1097, 1181, 1708
BceAI	ACGGC	2 cut(s)	58, 502
BcgI	CGANNNNNNTGC	4 cut(s)	81, 115, 184, 218
BciT130I	CCWGG	5 cut(s)	269, 763, 1469, 1524, 1566
BcnI	CCSGG	5 cut(s)	152, 279, 291, 292, 1361
BcoDI	GTCTC	2 cut(s)	682, 1513
BcuI	ACTAGT	1 cut(s)	1417
BfaI	CTAG	7 cut(s)	242, 440, 1418, 1452, 1572, 1673, 1680
BfmI	CTRYAG	2 cut(s)	792, 1089
BfoI	RGCGCY	3 cut(s)	30, 278, 371
BfuAI	ACCTGC	2 cut(s)	223, 1387
Bme18I	GGWCC	3 cut(s)	286, 444, 1582
BmeRI	GACNNNNNGTC	1 cut(s)	480
BmeT110I	CYCGRG	1 cut(s)	290
BmgT120I	GGNCC	7 cut(s)	261, 281, 286, 444, 459, 460, 1582
BmrI	ACTGGG	2 cut(s)	115, 950
BmsI	GCATC	1 cut(s)	1496
BmtI	GCTAGC	1 cut(s)	245
BmuI	ACTGGG	2 cut(s)	115, 950
BoxI	GACNNNNGTC	1 cut(s)	442
BpiI	GAAGAC	1 cut(s)	188
BpmI	CTGGAG	2 cut(s)	684, 1053
Bpu14I	TTCGAA	1 cut(s)	593
BpuMI	CCSGG	5 cut(s)	152, 279, 291, 292, 1361
BsaBI	GATNNNNATC	1 cut(s)	561
BsaHI	GRCGYC	3 cut(s)	45, 98, 275
BsaI	GGTCTC	1 cut(s)	1513
BsaJI	CCNNGG	7 cut(s)	150, 278, 289, 290, 627, 1263, 1467
BsaWI	WCCGGW	3 cut(s)	107, 598, 938
BsaXI	ACNNNNNCTCC	4 cut(s)	146, 176, 794, 824
Bsc4I	CCNNNNNNNGG	9 cut(s)	133, 156, 253, 290, 325, 633, 1420, 1598, 1706
Bse118I	RCCGGY	4 cut(s)	190, 283, 938, 1290
Bse1I	ACTGG	7 cut(s)	121, 821, 846, 956, 1002, 1330, 1333
Bse3DI	GCAATG	1 cut(s)	877
Bse8I	GATNNNNATC	1 cut(s)	561
BseBI	CCWGG	5 cut(s)	269, 763, 1469, 1524, 1566
BseDI	CCNNGG	7 cut(s)	150, 278, 289, 290, 627, 1263, 1467
BseGI	GGATG	6 cut(s)	637, 1192, 1273, 1337, 1402, 1521
BseJI	GATNNNNATC	1 cut(s)	561
BseLI	CCNNNNNNNGG	9 cut(s)	133, 156, 253, 290, 325, 633, 1420, 1598, 1706
BseMI	GCAATG	1 cut(s)	877
BseMII	CTCAG	3 cut(s)	989, 1566, 1626
BseNI	ACTGG	7 cut(s)	121, 821, 846, 956, 1002, 1330, 1333
BseSI	GKGCMC	2 cut(s)	463, 730
BseX3I	CGGCCG	1 cut(s)	188
BseXI	GCAGC	4 cut(s)	36, 86, 156, 189
BseYI	CCCAGC	1 cut(s)	246
BsgI	GTGCAG	1 cut(s)	155
Bsh1236I	CGCG	3 cut(s)	187, 323, 611
Bsh1285I	CGRYCG	1 cut(s)	191
BshFI	GGCC	4 cut(s)	190, 262, 283, 461
BshNI	GGYRCC	3 cut(s)	274, 725, 1718
BshTI	ACCGGT	1 cut(s)	938
BsiEI	CGRYCG	1 cut(s)	191
BsiHKAI	GWGCWC	2 cut(s)	427, 662
BsiHKCI	CYCGRG	1 cut(s)	290
BsiWI	CGTACG	1 cut(s)	213
BslFI	GGGAC	5 cut(s)	109, 272, 1090, 1361, 1595
BslI	CCNNNNNNNGG	9 cut(s)	133, 156, 253, 290, 325, 633, 1420, 1598, 1706
BsmAI	GTCTC	2 cut(s)	682, 1513
BsmFI	GGGAC	5 cut(s)	109, 272, 1090, 1361, 1595
BsnI	GGCC	4 cut(s)	190, 262, 283, 461
Bso31I	GGTCTC	1 cut(s)	1513
BsoBI	CYCGRG	1 cut(s)	290
Bsp119I	TTCGAA	1 cut(s)	593
Bsp120I	GGGCCC	1 cut(s)	459
Bsp1286I	GDGCHC	5 cut(s)	427, 463, 662, 730, 1446
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	4 cut(s)	541, 562, 967, 998
Bsp19I	CCATGG	1 cut(s)	1263
BspANI	GGCC	4 cut(s)	190, 262, 283, 461
BspCNI	CTCAG	3 cut(s)	988, 1565, 1625
BspFNI	CGCG	3 cut(s)	187, 323, 611
BspMAI	CTGCAG	1 cut(s)	796
BspMI	ACCTGC	2 cut(s)	223, 1387
BspOI	GCTAGC	1 cut(s)	245
BspPI	GGATC	5 cut(s)	557, 570, 962, 975, 993
BspQI	GCTCTTC	1 cut(s)	1674
BspT104I	TTCGAA	1 cut(s)	593
BspT107I	GGYRCC	3 cut(s)	274, 725, 1718
BspTNI	GGTCTC	1 cut(s)	1513
BsrDI	GCAATG	1 cut(s)	877
BsrFI	RCCGGY	4 cut(s)	190, 283, 938, 1290
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	7 cut(s)	121, 821, 846, 956, 1002, 1330, 1333
BssAI	RCCGGY	4 cut(s)	190, 283, 938, 1290
BssECI	CCNNGG	7 cut(s)	150, 278, 289, 290, 627, 1263, 1467
BssMI	GATC	4 cut(s)	541, 562, 967, 998
BssNI	GRCGYC	3 cut(s)	45, 98, 275
BssT1I	CCWWGG	2 cut(s)	627, 1263
Bst2UI	CCWGG	5 cut(s)	269, 763, 1469, 1524, 1566
Bst4CI	ACNGT	5 cut(s)	17, 836, 1093, 1120, 1430
Bst6I	CTCTTC	1 cut(s)	1674
BstACI	GRCGYC	3 cut(s)	45, 98, 275
BstAPI	GCANNNNNTGC	1 cut(s)	643
BstAUI	TGTACA	1 cut(s)	3
BstBI	TTCGAA	1 cut(s)	593
BstC8I	GCNNGC	5 cut(s)	31, 192, 243, 304, 1391
BstDEI	CTNAG	4 cut(s)	371, 975, 1552, 1612
BstDSI	CCRYGG	1 cut(s)	1263
BstEII	GGTNACC	1 cut(s)	1628
BstENI	CCTNNNNNAGG	1 cut(s)	131
BstF5I	GGATG	6 cut(s)	637, 1192, 1273, 1337, 1402, 1521
BstFNI	CGCG	3 cut(s)	187, 323, 611
BstH2I	RGCGCY	3 cut(s)	30, 278, 371
BstHHI	GCGC	6 cut(s)	29, 92, 115, 277, 318, 370
BstKTI	GATC	4 cut(s)	544, 565, 970, 1001
BstMAI	GTCTC	2 cut(s)	682, 1513
BstMBI	GATC	4 cut(s)	541, 562, 967, 998
BstMCI	CGRYCG	1 cut(s)	191
BstMWI	GCNNNNNNNGC	8 cut(s)	30, 74, 166, 238, 247, 643, 893, 1329
BstNI	CCWGG	5 cut(s)	269, 763, 1469, 1524, 1566
BstNSI	RCATGY	2 cut(s)	1393, 1505
BstPAI	GACNNNNGTC	1 cut(s)	442
BstPI	GGTNACC	1 cut(s)	1628
BstSFI	CTRYAG	2 cut(s)	792, 1089
BstSLI	GKGCMC	2 cut(s)	463, 730
BstUI	CGCG	3 cut(s)	187, 323, 611
BstV1I	GCAGC	4 cut(s)	36, 86, 156, 189
BstV2I	GAAGAC	1 cut(s)	188
BstX2I	RGATCY	3 cut(s)	562, 967, 998
BstYI	RGATCY	3 cut(s)	562, 967, 998
BstZI	CGGCCG	1 cut(s)	188
BsuRI	GGCC	4 cut(s)	190, 262, 283, 461
BtgI	CCRYGG	1 cut(s)	1263
BtgZI	GCGATG	1 cut(s)	283
BtsCI	GGATG	6 cut(s)	637, 1192, 1273, 1337, 1402, 1521
BtsI	GCAGTG	1 cut(s)	1482
BtsIMutI	CAGTG	4 cut(s)	990, 1323, 1426, 1482
BveI	ACCTGC	2 cut(s)	223, 1387
Cac8I	GCNNGC	5 cut(s)	31, 192, 243, 304, 1391
CaiI	CAGNNNCTG	2 cut(s)	127, 840
CfoI	GCGC	6 cut(s)	29, 92, 115, 277, 318, 370
Cfr10I	RCCGGY	4 cut(s)	190, 283, 938, 1290
Cfr13I	GGNCC	7 cut(s)	261, 281, 286, 444, 459, 460, 1582
Cfr9I	CCCGGG	1 cut(s)	290
CseI	GACGC	2 cut(s)	34, 193
Csp6I	GTAC	8 cut(s)	4, 163, 214, 818, 843, 876, 910, 936
CspAI	ACCGGT	1 cut(s)	938
CviAII	CATG	9 cut(s)	7, 638, 815, 855, 893, 992, 1264, 1390, 1502
CviQI	GTAC	8 cut(s)	4, 163, 214, 818, 843, 876, 910, 936
DdeI	CTNAG	4 cut(s)	371, 975, 1552, 1612
DinI	GGCGCC	1 cut(s)	276
DpnI	GATC	4 cut(s)	543, 564, 969, 1000
DpnII	GATC	4 cut(s)	541, 562, 967, 998
DrdI	GACNNNNNNGTC	1 cut(s)	103
DriI	GACNNNNNGTC	1 cut(s)	480
DseDI	GACNNNNNNGTC	1 cut(s)	103
EaeI	YGGCCR	1 cut(s)	188
EagI	CGGCCG	1 cut(s)	188
Eam1104I	CTCTTC	1 cut(s)	1674
Eam1105I	GACNNNNNGTC	1 cut(s)	480
EarI	CTCTTC	1 cut(s)	1674
Ecl136II	GAGCTC	1 cut(s)	660
EclXI	CGGCCG	1 cut(s)	188
Eco130I	CCWWGG	2 cut(s)	627, 1263
Eco24I	GRGCYC	3 cut(s)	463, 662, 1446
Eco31I	GGTCTC	1 cut(s)	1513
Eco47I	GGWCC	3 cut(s)	286, 444, 1582
Eco52I	CGGCCG	1 cut(s)	188
Eco53kI	GAGCTC	1 cut(s)	660
Eco57I	CTGAAG	1 cut(s)	272
Eco88I	CYCGRG	1 cut(s)	290
Eco91I	GGTNACC	1 cut(s)	1628
EcoICRI	GAGCTC	1 cut(s)	660
EcoNI	CCTNNNNNAGG	1 cut(s)	131
EcoO109I	RGGNCCY	1 cut(s)	459
EcoO65I	GGTNACC	1 cut(s)	1628
EcoRII	CCWGG	5 cut(s)	267, 761, 1467, 1522, 1564
EcoT14I	CCWWGG	2 cut(s)	627, 1263
EcoT38I	GRGCYC	3 cut(s)	463, 662, 1446
EgeI	GGCGCC	1 cut(s)	276
EheI	GGCGCC	1 cut(s)	276
ErhI	CCWWGG	2 cut(s)	627, 1263
FaeI	CATG	9 cut(s)	10, 641, 818, 858, 896, 995, 1267, 1393, 1505
FalI	AAGNNNNNCTT	2 cut(s)	1188, 1220
FaqI	GGGAC	5 cut(s)	109, 272, 1090, 1361, 1595
FatI	CATG	9 cut(s)	6, 637, 814, 854, 892, 991, 1263, 1389, 1501
FauI	CCCGC	2 cut(s)	299, 1386
FokI	GGATG	6 cut(s)	644, 1199, 1280, 1324, 1409, 1528
FriOI	GRGCYC	3 cut(s)	463, 662, 1446
FspBI	CTAG	7 cut(s)	242, 440, 1418, 1452, 1572, 1673, 1680
FspI	TGCGCA	1 cut(s)	114
GlaI	GCGC	6 cut(s)	28, 91, 114, 276, 317, 369
GsaI	CCCAGC	1 cut(s)	250
GsuI	CTGGAG	2 cut(s)	684, 1053
HaeII	RGCGCY	3 cut(s)	30, 278, 371
HaeIII	GGCC	4 cut(s)	190, 262, 283, 461
HgaI	GACGC	2 cut(s)	34, 193
HhaI	GCGC	6 cut(s)	29, 92, 115, 277, 318, 370
Hin1I	GRCGYC	3 cut(s)	45, 98, 275
Hin1II	CATG	9 cut(s)	10, 641, 818, 858, 896, 995, 1267, 1393, 1505
Hin6I	GCGC	6 cut(s)	27, 90, 113, 275, 316, 368
HinP1I	GCGC	6 cut(s)	27, 90, 113, 275, 316, 368
HindIII	AAGCTT	1 cut(s)	716
HinfI	GANTC	7 cut(s)	196, 481, 595, 617, 704, 1160, 1616
HphI	GGTGA	2 cut(s)	953, 1167
Hpy166II	GTNNAC	2 cut(s)	1063, 1435
Hpy188I	TCNGA	5 cut(s)	178, 622, 1186, 1555, 1615
Hpy188III	TCNNGA	5 cut(s)	145, 663, 1023, 1070, 1232
Hpy8I	GTNNAC	2 cut(s)	1063, 1435
Hpy99I	CGWCG	9 cut(s)	61, 64, 67, 82, 100, 103, 106, 472, 1708
HpyAV	CCTTC	5 cut(s)	247, 740, 916, 1034, 1490
HpyCH4III	ACNGT	5 cut(s)	17, 836, 1093, 1120, 1430
HpyCH4IV	ACGT	3 cut(s)	56, 98, 1079
HpyCH4V	TGCA	7 cut(s)	172, 580, 700, 794, 854, 995, 1487
HpyF10VI	GCNNNNNNNGC	8 cut(s)	30, 74, 166, 238, 247, 643, 893, 1329
HpyF3I	CTNAG	4 cut(s)	371, 975, 1552, 1612
HpySE526I	ACGT	3 cut(s)	56, 98, 1079
Hsp92I	GRCGYC	3 cut(s)	45, 98, 275
Hsp92II	CATG	9 cut(s)	10, 641, 818, 858, 896, 995, 1267, 1393, 1505
HspAI	GCGC	6 cut(s)	27, 90, 113, 275, 316, 368
KasI	GGCGCC	1 cut(s)	274
KroI	GCCGGC	1 cut(s)	190
KroNI	GCCGGC	1 cut(s)	192
Kzo9I	GATC	4 cut(s)	541, 562, 967, 998
LguI	GCTCTTC	1 cut(s)	1674
LmnI	GCTCC	3 cut(s)	360, 1387, 1690
Lsp1109I	GCAGC	4 cut(s)	36, 86, 156, 189
LweI	GCATC	1 cut(s)	1496
MaeI	CTAG	7 cut(s)	242, 440, 1418, 1452, 1572, 1673, 1680
MaeII	ACGT	3 cut(s)	56, 98, 1079
MaeIII	GTNAC	7 cut(s)	17, 235, 482, 605, 1355, 1607, 1628
MalI	GATC	4 cut(s)	543, 564, 969, 1000
MboI	GATC	4 cut(s)	541, 562, 967, 998
MboII	GAAGA	4 cut(s)	193, 724, 1208, 1661
MfeI	CAATTG	1 cut(s)	695
MflI	RGATCY	3 cut(s)	562, 967, 998
MhlI	GDGCHC	5 cut(s)	427, 463, 662, 730, 1446
MluCI	AATT	5 cut(s)	547, 589, 695, 1017, 1509
MluI	ACGCGT	1 cut(s)	609
Mly113I	GGCGCC	1 cut(s)	275
MlyI	GAGTC	2 cut(s)	490, 1154
MmeI	TCCRAC	3 cut(s)	499, 1337, 1399
MnlI	CCTC	7 cut(s)	148, 252, 324, 428, 691, 739, 1572
MroNI	GCCGGC	1 cut(s)	190
MroXI	GAANNNNTTC	1 cut(s)	1476
MseI	TTAA	3 cut(s)	570, 756, 1622
MslI	CAYNNNNRTG	2 cut(s)	897, 1035
MspA1I	CMGCKG	2 cut(s)	250, 306
MunI	CAATTG	1 cut(s)	695
MvaI	CCWGG	5 cut(s)	269, 763, 1469, 1524, 1566
MvnI	CGCG	3 cut(s)	187, 323, 611
MwoI	GCNNNNNNNGC	8 cut(s)	30, 74, 166, 238, 247, 643, 893, 1329
NaeI	GCCGGC	1 cut(s)	192
NarI	GGCGCC	1 cut(s)	275
NciI	CCSGG	5 cut(s)	152, 279, 291, 292, 1361
NcoI	CCATGG	1 cut(s)	1263
NdeII	GATC	4 cut(s)	541, 562, 967, 998
NgoMIV	GCCGGC	1 cut(s)	190
NheI	GCTAGC	1 cut(s)	241
NlaIII	CATG	9 cut(s)	10, 641, 818, 858, 896, 995, 1267, 1393, 1505
NmuCI	GTSAC	3 cut(s)	235, 482, 605
NsbI	TGCGCA	1 cut(s)	114
NspI	RCATGY	2 cut(s)	1393, 1505
NspV	TTCGAA	1 cut(s)	593
PaeI	GCATGC	1 cut(s)	1393
PciSI	GCTCTTC	1 cut(s)	1674
PcsI	WCGNNNNNNNCGW	4 cut(s)	92, 101, 191, 476
PdiI	GCCGGC	1 cut(s)	192
PdmI	GAANNNNTTC	1 cut(s)	1476
PfeI	GAWTC	5 cut(s)	196, 595, 617, 704, 1616
Pfl23II	CGTACG	1 cut(s)	213
PflFI	GACNNNGTC	1 cut(s)	100
PinAI	ACCGGT	1 cut(s)	938
PleI	GAGTC	2 cut(s)	489, 1154
PluTI	GGCGCC	1 cut(s)	278
PpsI	GAGTC	2 cut(s)	489, 1154
PshAI	GACNNNNGTC	1 cut(s)	442
PsiI	TTATAA	4 cut(s)	738, 831, 962, 1731
Psp124BI	GAGCTC	1 cut(s)	662
Psp6I	CCWGG	5 cut(s)	267, 761, 1467, 1522, 1564
PspEI	GGTNACC	1 cut(s)	1628
PspFI	CCCAGC	1 cut(s)	246
PspGI	CCWGG	5 cut(s)	267, 761, 1467, 1522, 1564
PspLI	CGTACG	1 cut(s)	213
PspOMI	GGGCCC	1 cut(s)	459
PspPI	GGNCC	7 cut(s)	261, 281, 286, 444, 459, 460, 1582
PsrI	GAACNNNNNNTAC	1 cut(s)	34
PstI	CTGCAG	1 cut(s)	796
PstNI	CAGNNNCTG	2 cut(s)	127, 840
PsuI	RGATCY	3 cut(s)	562, 967, 998
PsyI	GACNNNGTC	1 cut(s)	100
PvuII	CAGCTG	1 cut(s)	250
RsaI	GTAC	8 cut(s)	5, 164, 215, 819, 844, 877, 911, 937
RsaNI	GTAC	8 cut(s)	4, 163, 214, 818, 843, 876, 910, 936
RseI	CAYNNNNRTG	2 cut(s)	897, 1035
SacI	GAGCTC	1 cut(s)	662
SapI	GCTCTTC	1 cut(s)	1674
SaqAI	TTAA	3 cut(s)	570, 756, 1622
Sau3AI	GATC	4 cut(s)	541, 562, 967, 998
Sau96I	GGNCC	7 cut(s)	261, 281, 286, 444, 459, 460, 1582
SchI	GAGTC	2 cut(s)	490, 1154
SduI	GDGCHC	5 cut(s)	427, 463, 662, 730, 1446
SfaNI	GCATC	1 cut(s)	1496
SfcI	CTRYAG	2 cut(s)	792, 1089
SfoI	GGCGCC	1 cut(s)	276
SfuI	TTCGAA	1 cut(s)	593
SgrAI	CRCCGGYG	1 cut(s)	1290
SinI	GGWCC	3 cut(s)	286, 444, 1582
SmaI	CCCGGG	1 cut(s)	292
SmiMI	CAYNNNNRTG	2 cut(s)	897, 1035
SpeI	ACTAGT	1 cut(s)	1417
SphI	GCATGC	1 cut(s)	1393
Sse9I	AATT	5 cut(s)	547, 589, 695, 1017, 1509
SspDI	GGCGCC	1 cut(s)	274
SspMI	CTAG	7 cut(s)	242, 440, 1418, 1452, 1572, 1673, 1680
SstI	GAGCTC	1 cut(s)	662
StyI	CCWWGG	2 cut(s)	627, 1263
TaaI	ACNGT	5 cut(s)	17, 836, 1093, 1120, 1430
TaiI	ACGT	3 cut(s)	59, 101, 1082
TaqI	TCGA	3 cut(s)	479, 593, 1703
TasI	AATT	5 cut(s)	547, 589, 695, 1017, 1509
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	7 cut(s)	71, 74, 190, 275, 326, 329, 1285
TfiI	GAWTC	5 cut(s)	196, 595, 617, 704, 1616
Tru1I	TTAA	3 cut(s)	570, 756, 1622
Tru9I	TTAA	3 cut(s)	570, 756, 1622
TscAI	CASTG	4 cut(s)	990, 1330, 1433, 1489
TseFI	GTSAC	3 cut(s)	235, 482, 605
TseI	GCWGC	4 cut(s)	24, 74, 169, 202
Tsp45I	GTSAC	3 cut(s)	235, 482, 605
TspDTI	ATGAA	2 cut(s)	23, 722
TspMI	CCCGGG	1 cut(s)	290
TspRI	CASTG	4 cut(s)	990, 1330, 1433, 1489
Tth111I	GACNNNGTC	1 cut(s)	100
VpaK11BI	GGWCC	3 cut(s)	286, 444, 1582
XagI	CCTNNNNNAGG	1 cut(s)	131
XapI	RAATTY	1 cut(s)	1509
XceI	RCATGY	2 cut(s)	1393, 1505
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1023
XmaI	CCCGGG	1 cut(s)	290
XmnI	GAANNNNTTC	1 cut(s)	1476
XspI	CTAG	7 cut(s)	242, 440, 1418, 1452, 1572, 1673, 1680
ZraI	GACGTC	1 cut(s)	99

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.