Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000660.1

Orthogroup ID

OG0007846

Physical Location & Seq

Genomic Coordinates Forward (+)

189976 .. 193570

Gene Structure 3595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000660.1_g000042.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

atgtacatgaacaacggttacagcagcgccagcaccaaaaacggcgtcaatctaacgtcgtcgtcgtcggcgacgacgtcgggcgcaacgacgtcggcgtccggtgggcaaacccagtccctgataaaggcgtatttcaagaccccggaggggcggtacaagctgcactcggagaagacgcggccggcgaatctgctgccctattcgtacgccaagacaatctcgcaggtcacgctagcccagctgaaggagaggcccaaccaggcggcgccggggccggtccccgggaacatcgccagcgggagtgtgcgccacgcggcggcgaggctgttgggggttggggctggaaatgggagcaaggcgcttagttatttgggcggtgggagcagtaagacgagtaatggaagtagtaggaatgctcattttggaggactagggtccaatgggtatggggcccattcgtcgccgacttcgagtcacggcggtaaagggtcgttcttggtgttcaatgttggagatactatctatatttgcgatctcaattcgccagataaggatcctattaaagcgttgcattttagtaattcgaatccggtgtgtcacgcgtttgattcggaagccaaggatgggcatgacttgcttattggattgagctctggagatatttattcagcctctttgagacagcaattgcaagattctgggaagaagcttgttggtgccctgcattataacaaagagggttctgttaataccagtcgctgtaccagtattgcatgggttcccaaaggcaatggtacttttattgctgctcatgctgatggaaacttgtacgaatatgagaagggcaaggatattaccggtgatacttctttcccagttataaaggatcctgctcagttttcagtgtatcatgcaagatccagtaagagtaatccaatttccagatggcatatttgtgaaggttcaataaacagcattgtttactctccggatgggacatatttggctacagttggtagagatgggtacttgcgagtatttgactactcaaaagaacaactgataggtggcggcaagagttattatggttctcttctatgttgtacttggagtccggatggaaaatatgttttgactggaggggaagatgatcttgttacagtatggagcatggaagataggaaggttgtagcttggggtgaaggacataactcatgggttagtggtttggcttttgactcgcattggtcatcaccaacttcggatggcacagaagaaaatcttgtttatcgctttggctctgttggtcaggacacaaaactactcctgtgggaactctccatggatgagattgtagtgccgcttcgccggtgttcagttggtggctctccaacattcagcactggtagccagtcatcccattgggacagcagttacccggttggcactctccaacctgctccaagcatgcgggatgttcccaagctctccccactagtggctcactgcgttcacaccgagcccctgtctagtttagcttttacccaggaagctattctcactgcatcttgggaagggcatgtaaaaatttggatgagaccaggtgaacccgaaagtaaatccaccaactcagaagctctgccaggtgctagtttgagggaccaactaccaccgacaggaaaaagttactcagaatcattgaggggttacccattgcctgaaagtaaatcaaacaactcacaagctcttctaggtgctagttcaaaggagcaacagccatcgacgggcaaaggtggtgcctatagttataaagacttctcaaaaagcaaccgataccttccgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

615

Amino Acids

65.59

Weight (kDa)

8.22

Isoelectric Point (pI)

41.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007846)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37160 AT2G37160
fragaria_vesca	FvH4_3g32650 FvH4_6g15710 FvH4_6g15710 FvH4_6g15710 FvH4_6g15710
malus_domestica	MD03G1114500.v1.1 MD11G1133300.v1.1
prunus_persica	Prupe.6G099500_v2.0.a1 Prupe.6G099500_v2.0.a1 Prupe.6G099500_v2.0.a1 Prupe.6G238200_v2.0.a1
pyrus_communis	pycom11g11000
rosa_chinensis	RchiOBHm_Chr5g0059721
rosa_laevigata	RLG00000035323
rosa_multiflora	Rmu_sc0000660.1_g000042
rosa_roxburghii	Rroxscaffold_1G00020890
rosa_rugosa	Rorug05G0324500
rosa_samantha	Rh5AG389900 Rh5BG401500 Rh5CG425600 Rh5DG417900
rosa_wichuraiana	Rw5G036690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	732, 884, 1812
AasI	GACNNNNNNGTC	1 cut(s)	97
AatII	GACGTC	2 cut(s)	80, 95
Acc36I	ACCTGC	2 cut(s)	217, 1468
AccB1I	GGYRCC	3 cut(s)	268, 719, 1799
AccII	CGCG	3 cut(s)	181, 317, 605
AccIII	TCCGGA	2 cut(s)	991, 1117
AclWI	GGATC	5 cut(s)	551, 564, 884, 897, 915
AcoI	YGGCCR	1 cut(s)	182
AcsI	RAATTY	1 cut(s)	1590
AcuI	CTGAAG	1 cut(s)	266
AcyI	GRCGYC	5 cut(s)	45, 77, 92, 98, 269
AfaI	GTAC	8 cut(s)	5, 158, 209, 766, 799, 833, 1031, 1108
AfiI	CCNNNNNNNGG	9 cut(s)	127, 150, 247, 284, 319, 627, 1501, 1679, 1787
AflIII	ACRYGT	1 cut(s)	603
AgeI	ACCGGT	1 cut(s)	860
AgsI	TTSAA	4 cut(s)	139, 508, 969, 1767
AhdI	GACNNNNNGTC	1 cut(s)	474
AhlI	ACTAGT	1 cut(s)	1498
AjnI	CCWGG	4 cut(s)	261, 1548, 1603, 1645
Alw21I	GWGCWC	1 cut(s)	656
Alw26I	GTCTC	2 cut(s)	676, 1594
AlwI	GGATC	5 cut(s)	551, 564, 884, 897, 915
AlwNI	CAGNNNCTG	2 cut(s)	121, 762
Ama87I	CYCGRG	1 cut(s)	284
Aor13HI	TCCGGA	2 cut(s)	991, 1117
AoxI	GGCC	4 cut(s)	182, 254, 275, 453
ApaI	GGGCCC	1 cut(s)	457
ApeKI	GCWGC	4 cut(s)	24, 163, 196, 809
ApoI	RAATTY	1 cut(s)	1590
ArsI	GACNNNNNNTTYG	2 cut(s)	30, 62
AsiGI	ACCGGT	1 cut(s)	860
Asp700I	GAANNNNTTC	1 cut(s)	1557
AspLEI	GCGC	5 cut(s)	29, 86, 271, 312, 364
AspS9I	GGNCC	7 cut(s)	255, 275, 280, 438, 453, 454, 1663
AsuC2I	CCSGG	5 cut(s)	146, 273, 285, 286, 1442
AsuHPI	GGTGA	4 cut(s)	875, 1214, 1248, 1619
AsuII	TTCGAA	1 cut(s)	587
AsuNHI	GCTAGC	1 cut(s)	235
AvaI	CYCGRG	1 cut(s)	284
AvaII	GGWCC	3 cut(s)	280, 438, 1663
BaeGI	GKGCMC	2 cut(s)	457, 724
BamHI	GGATCC	2 cut(s)	556, 889
BanI	GGYRCC	3 cut(s)	268, 719, 1799
BanII	GRGCYC	3 cut(s)	457, 656, 1527
BarI	GAAGNNNNNNTAC	2 cut(s)	1350, 1382
BbsI	GAAGAC	1 cut(s)	182
Bbv12I	GWGCWC	1 cut(s)	656
BbvI	GCAGC	4 cut(s)	36, 150, 183, 796
BccI	CCATC	8 cut(s)	620, 815, 942, 989, 1019, 1115, 1262, 1789
BceAI	ACGGC	2 cut(s)	58, 496
BcgI	CGANNNNNNTGC	4 cut(s)	75, 109, 178, 212
BciT130I	CCWGG	4 cut(s)	263, 1550, 1605, 1647
BcnI	CCSGG	5 cut(s)	146, 273, 285, 286, 1442
BcoDI	GTCTC	2 cut(s)	676, 1594
BcuI	ACTAGT	1 cut(s)	1498
BfaI	CTAG	7 cut(s)	236, 434, 1499, 1533, 1653, 1754, 1761
BfmI	CTRYAG	2 cut(s)	1011, 1804
BfoI	RGCGCY	3 cut(s)	30, 272, 365
BfuAI	ACCTGC	2 cut(s)	217, 1468
Bme1390I	CCNGG	9 cut(s)	146, 263, 273, 285, 286, 1442, 1550, 1605, 1647
Bme18I	GGWCC	3 cut(s)	280, 438, 1663
BmeRI	GACNNNNNGTC	1 cut(s)	474
BmeT110I	CYCGRG	1 cut(s)	284
BmgT120I	GGNCC	7 cut(s)	255, 275, 280, 438, 453, 454, 1663
BmrFI	CCNGG	9 cut(s)	146, 263, 273, 285, 286, 1442, 1550, 1605, 1647
BmrI	ACTGGG	2 cut(s)	109, 872
BmsI	GCATC	1 cut(s)	1577
BmtI	GCTAGC	1 cut(s)	239
BmuI	ACTGGG	2 cut(s)	109, 872
BoxI	GACNNNNGTC	1 cut(s)	436
BpiI	GAAGAC	1 cut(s)	182
BpmI	CTGGAG	2 cut(s)	678, 1161
Bpu14I	TTCGAA	1 cut(s)	587
BpuMI	CCSGG	5 cut(s)	146, 273, 285, 286, 1442
BsaBI	GATNNNNATC	1 cut(s)	555
BsaHI	GRCGYC	5 cut(s)	45, 77, 92, 98, 269
BsaI	GGTCTC	1 cut(s)	1594
BsaJI	CCNNGG	7 cut(s)	144, 272, 283, 284, 621, 1344, 1548
BsaWI	WCCGGW	5 cut(s)	101, 592, 860, 991, 1117
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bsc4I	CCNNNNNNNGG	9 cut(s)	127, 150, 247, 284, 319, 627, 1501, 1679, 1787
Bse118I	RCCGGY	4 cut(s)	184, 277, 860, 1371
Bse1I	ACTGG	8 cut(s)	115, 756, 768, 878, 924, 1144, 1411, 1414
Bse3DI	GCAATG	2 cut(s)	799, 1715
Bse8I	GATNNNNATC	1 cut(s)	555
BseAI	TCCGGA	2 cut(s)	991, 1117
BseBI	CCWGG	4 cut(s)	263, 1550, 1605, 1647
BseDI	CCNNGG	7 cut(s)	144, 272, 283, 284, 621, 1344, 1548
BseGI	GGATG	8 cut(s)	631, 1000, 1126, 1273, 1354, 1418, 1483, 1602
BseJI	GATNNNNATC	1 cut(s)	555
BseLI	CCNNNNNNNGG	9 cut(s)	127, 150, 247, 284, 319, 627, 1501, 1679, 1787
BseMI	GCAATG	2 cut(s)	799, 1715
BseMII	CTCAG	3 cut(s)	911, 1647, 1707
BseNI	ACTGG	8 cut(s)	115, 756, 768, 878, 924, 1144, 1411, 1414
BseSI	GKGCMC	2 cut(s)	457, 724
BseX3I	CGGCCG	1 cut(s)	182
BseXI	GCAGC	4 cut(s)	36, 150, 183, 796
BseYI	CCCAGC	1 cut(s)	240
BsgI	GTGCAG	1 cut(s)	149
Bsh1236I	CGCG	3 cut(s)	181, 317, 605
Bsh1285I	CGRYCG	1 cut(s)	185
BshFI	GGCC	4 cut(s)	184, 256, 277, 455
BshNI	GGYRCC	3 cut(s)	268, 719, 1799
BshTI	ACCGGT	1 cut(s)	860
BsiEI	CGRYCG	1 cut(s)	185
BsiHKAI	GWGCWC	1 cut(s)	656
BsiHKCI	CYCGRG	1 cut(s)	284
BsiWI	CGTACG	1 cut(s)	207
BslFI	GGGAC	5 cut(s)	103, 266, 1012, 1442, 1676
BslI	CCNNNNNNNGG	9 cut(s)	127, 150, 247, 284, 319, 627, 1501, 1679, 1787
BsmAI	GTCTC	2 cut(s)	676, 1594
BsmFI	GGGAC	5 cut(s)	103, 266, 1012, 1442, 1676
BsmI	GAATGC	1 cut(s)	421
BsnI	GGCC	4 cut(s)	184, 256, 277, 455
Bso31I	GGTCTC	1 cut(s)	1594
BsoBI	CYCGRG	1 cut(s)	284
Bsp119I	TTCGAA	1 cut(s)	587
Bsp120I	GGGCCC	1 cut(s)	453
Bsp1286I	GDGCHC	4 cut(s)	457, 656, 724, 1527
Bsp13I	TCCGGA	2 cut(s)	991, 1117
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	5 cut(s)	535, 556, 889, 920, 1153
Bsp19I	CCATGG	1 cut(s)	1344
BspANI	GGCC	4 cut(s)	184, 256, 277, 455
BspCNI	CTCAG	3 cut(s)	910, 1646, 1706
BspEI	TCCGGA	2 cut(s)	991, 1117
BspFNI	CGCG	3 cut(s)	181, 317, 605
BspMI	ACCTGC	2 cut(s)	217, 1468
BspOI	GCTAGC	1 cut(s)	239
BspPI	GGATC	5 cut(s)	551, 564, 884, 897, 915
BspQI	GCTCTTC	1 cut(s)	1755
BspT104I	TTCGAA	1 cut(s)	587
BspT107I	GGYRCC	3 cut(s)	268, 719, 1799
BspTNI	GGTCTC	1 cut(s)	1594
BsrDI	GCAATG	2 cut(s)	799, 1715
BsrFI	RCCGGY	4 cut(s)	184, 277, 860, 1371
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	8 cut(s)	115, 756, 768, 878, 924, 1144, 1411, 1414
BssAI	RCCGGY	4 cut(s)	184, 277, 860, 1371
BssECI	CCNNGG	7 cut(s)	144, 272, 283, 284, 621, 1344, 1548
BssMI	GATC	5 cut(s)	535, 556, 889, 920, 1153
BssNI	GRCGYC	5 cut(s)	45, 77, 92, 98, 269
BssT1I	CCWWGG	2 cut(s)	621, 1344
Bst2UI	CCWGG	4 cut(s)	263, 1550, 1605, 1647
Bst4CI	ACNGT	3 cut(s)	17, 1015, 1165
Bst6I	CTCTTC	2 cut(s)	1101, 1755
BstACI	GRCGYC	5 cut(s)	45, 77, 92, 98, 269
BstAPI	GCANNNNNTGC	1 cut(s)	637
BstAUI	TGTACA	1 cut(s)	3
BstBI	TTCGAA	1 cut(s)	587
BstC8I	GCNNGC	5 cut(s)	31, 186, 237, 298, 1472
BstDEI	CTNAG	4 cut(s)	365, 897, 1633, 1693
BstDSI	CCRYGG	1 cut(s)	1344
BstEII	GGTNACC	1 cut(s)	1709
BstENI	CCTNNNNNAGG	1 cut(s)	125
BstF5I	GGATG	8 cut(s)	631, 1000, 1126, 1273, 1354, 1418, 1483, 1602
BstFNI	CGCG	3 cut(s)	181, 317, 605
BstH2I	RGCGCY	3 cut(s)	30, 272, 365
BstHHI	GCGC	5 cut(s)	29, 86, 271, 312, 364
BstKTI	GATC	5 cut(s)	538, 559, 892, 923, 1156
BstMAI	GTCTC	2 cut(s)	676, 1594
BstMBI	GATC	5 cut(s)	535, 556, 889, 920, 1153
BstMCI	CGRYCG	1 cut(s)	185
BstMWI	GCNNNNNNNGC	8 cut(s)	30, 160, 232, 241, 384, 637, 815, 1410
BstNI	CCWGG	4 cut(s)	263, 1550, 1605, 1647
BstNSI	RCATGY	2 cut(s)	1474, 1586
BstPAI	GACNNNNGTC	1 cut(s)	436
BstPI	GGTNACC	1 cut(s)	1709
BstSCI	CCNGG	9 cut(s)	144, 261, 271, 283, 284, 1440, 1548, 1603, 1645
BstSFI	CTRYAG	2 cut(s)	1011, 1804
BstSLI	GKGCMC	2 cut(s)	457, 724
BstUI	CGCG	3 cut(s)	181, 317, 605
BstV1I	GCAGC	4 cut(s)	36, 150, 183, 796
BstV2I	GAAGAC	1 cut(s)	182
BstX2I	RGATCY	3 cut(s)	556, 889, 920
BstYI	RGATCY	3 cut(s)	556, 889, 920
BstZI	CGGCCG	1 cut(s)	182
BsuRI	GGCC	4 cut(s)	184, 256, 277, 455
BtgI	CCRYGG	1 cut(s)	1344
BtgZI	GCGATG	1 cut(s)	277
BtsCI	GGATG	8 cut(s)	631, 1000, 1126, 1273, 1354, 1418, 1483, 1602
BtsI	GCAGTG	2 cut(s)	1507, 1563
BtsIMutI	CAGTG	4 cut(s)	912, 1404, 1507, 1563
BveI	ACCTGC	2 cut(s)	217, 1468
Cac8I	GCNNGC	5 cut(s)	31, 186, 237, 298, 1472
CaiI	CAGNNNCTG	2 cut(s)	121, 762
CfoI	GCGC	5 cut(s)	29, 86, 271, 312, 364
Cfr10I	RCCGGY	4 cut(s)	184, 277, 860, 1371
Cfr13I	GGNCC	7 cut(s)	255, 275, 280, 438, 453, 454, 1663
Cfr9I	CCCGGG	1 cut(s)	284
CseI	GACGC	3 cut(s)	34, 87, 187
CsiI	ACCWGGT	1 cut(s)	1603
Csp6I	GTAC	8 cut(s)	4, 157, 208, 765, 798, 832, 1030, 1107
CspAI	ACCGGT	1 cut(s)	860
CviQI	GTAC	8 cut(s)	4, 157, 208, 765, 798, 832, 1030, 1107
DdeI	CTNAG	4 cut(s)	365, 897, 1633, 1693
DinI	GGCGCC	1 cut(s)	270
DpnI	GATC	5 cut(s)	537, 558, 891, 922, 1155
DpnII	GATC	5 cut(s)	535, 556, 889, 920, 1153
DrdI	GACNNNNNNGTC	1 cut(s)	97
DriI	GACNNNNNGTC	1 cut(s)	474
DseDI	GACNNNNNNGTC	1 cut(s)	97
EaeI	YGGCCR	1 cut(s)	182
EagI	CGGCCG	1 cut(s)	182
Eam1104I	CTCTTC	2 cut(s)	1101, 1755
Eam1105I	GACNNNNNGTC	1 cut(s)	474
EarI	CTCTTC	2 cut(s)	1101, 1755
Ecl136II	GAGCTC	1 cut(s)	654
EclXI	CGGCCG	1 cut(s)	182
Eco130I	CCWWGG	2 cut(s)	621, 1344
Eco24I	GRGCYC	3 cut(s)	457, 656, 1527
Eco31I	GGTCTC	1 cut(s)	1594
Eco47I	GGWCC	3 cut(s)	280, 438, 1663
Eco52I	CGGCCG	1 cut(s)	182
Eco53kI	GAGCTC	1 cut(s)	654
Eco57I	CTGAAG	1 cut(s)	266
Eco88I	CYCGRG	1 cut(s)	284
Eco91I	GGTNACC	1 cut(s)	1709
EcoICRI	GAGCTC	1 cut(s)	654
EcoNI	CCTNNNNNAGG	1 cut(s)	125
EcoO109I	RGGNCCY	1 cut(s)	453
EcoO65I	GGTNACC	1 cut(s)	1709
EcoRII	CCWGG	4 cut(s)	261, 1548, 1603, 1645
EcoT14I	CCWWGG	2 cut(s)	621, 1344
EcoT38I	GRGCYC	3 cut(s)	457, 656, 1527
EgeI	GGCGCC	1 cut(s)	270
EheI	GGCGCC	1 cut(s)	270
ErhI	CCWWGG	2 cut(s)	621, 1344
FalI	AAGNNNNNCTT	4 cut(s)	1140, 1172, 1269, 1301
FaqI	GGGAC	5 cut(s)	103, 266, 1012, 1442, 1676
FauI	CCCGC	2 cut(s)	293, 1467
FokI	GGATG	8 cut(s)	638, 1007, 1133, 1280, 1361, 1405, 1490, 1609
FriOI	GRGCYC	3 cut(s)	457, 656, 1527
FspBI	CTAG	7 cut(s)	236, 434, 1499, 1533, 1653, 1754, 1761
GlaI	GCGC	5 cut(s)	28, 85, 270, 311, 363
GsaI	CCCAGC	1 cut(s)	244
GsuI	CTGGAG	2 cut(s)	678, 1161
HaeII	RGCGCY	3 cut(s)	30, 272, 365
HaeIII	GGCC	4 cut(s)	184, 256, 277, 455
HgaI	GACGC	3 cut(s)	34, 87, 187
HhaI	GCGC	5 cut(s)	29, 86, 271, 312, 364
Hin1I	GRCGYC	5 cut(s)	45, 77, 92, 98, 269
Hin6I	GCGC	5 cut(s)	27, 84, 269, 310, 362
HinP1I	GCGC	5 cut(s)	27, 84, 269, 310, 362
HindIII	AAGCTT	1 cut(s)	710
HinfI	GANTC	8 cut(s)	190, 475, 589, 611, 698, 1114, 1241, 1697
HphI	GGTGA	4 cut(s)	875, 1214, 1248, 1619
Hpy166II	GTNNAC	3 cut(s)	985, 1516, 1610
Hpy188I	TCNGA	5 cut(s)	172, 616, 1267, 1636, 1696
Hpy188III	TCNNGA	6 cut(s)	139, 657, 945, 992, 1118, 1313
Hpy8I	GTNNAC	3 cut(s)	985, 1516, 1610
HpyAV	CCTTC	6 cut(s)	241, 838, 956, 1180, 1199, 1571
HpyCH4III	ACNGT	3 cut(s)	17, 1015, 1165
HpyCH4IV	ACGT	3 cut(s)	56, 77, 92
HpyCH4V	TGCA	7 cut(s)	166, 574, 694, 727, 776, 917, 1568
HpyF10VI	GCNNNNNNNGC	8 cut(s)	30, 160, 232, 241, 384, 637, 815, 1410
HpyF3I	CTNAG	4 cut(s)	365, 897, 1633, 1693
HpySE526I	ACGT	3 cut(s)	56, 77, 92
Hsp92I	GRCGYC	5 cut(s)	45, 77, 92, 98, 269
HspAI	GCGC	5 cut(s)	27, 84, 269, 310, 362
KasI	GGCGCC	1 cut(s)	268
Kpn2I	TCCGGA	2 cut(s)	991, 1117
KroI	GCCGGC	1 cut(s)	184
KroNI	GCCGGC	1 cut(s)	186
Kzo9I	GATC	5 cut(s)	535, 556, 889, 920, 1153
LguI	GCTCTTC	1 cut(s)	1755
LmnI	GCTCC	5 cut(s)	354, 384, 1170, 1468, 1771
Lsp1109I	GCAGC	4 cut(s)	36, 150, 183, 796
LweI	GCATC	1 cut(s)	1577
MabI	ACCWGGT	1 cut(s)	1603
MaeI	CTAG	7 cut(s)	236, 434, 1499, 1533, 1653, 1754, 1761
MaeII	ACGT	3 cut(s)	56, 77, 92
MaeIII	GTNAC	8 cut(s)	17, 229, 476, 599, 1159, 1436, 1688, 1709
MalI	GATC	5 cut(s)	537, 558, 891, 922, 1155
MboI	GATC	5 cut(s)	535, 556, 889, 920, 1153
MboII	GAAGA	7 cut(s)	187, 718, 1088, 1160, 1190, 1289, 1742
MfeI	CAATTG	1 cut(s)	689
MflI	RGATCY	3 cut(s)	556, 889, 920
MhlI	GDGCHC	4 cut(s)	457, 656, 724, 1527
MluCI	AATT	5 cut(s)	541, 583, 689, 939, 1590
MluI	ACGCGT	1 cut(s)	603
Mly113I	GGCGCC	1 cut(s)	269
MlyI	GAGTC	3 cut(s)	484, 1123, 1235
MmeI	TCCRAC	3 cut(s)	493, 1418, 1480
MnlI	CCTC	9 cut(s)	142, 246, 318, 422, 685, 733, 1136, 1653, 1698
MroI	TCCGGA	2 cut(s)	991, 1117
MroNI	GCCGGC	1 cut(s)	184
MroXI	GAANNNNTTC	1 cut(s)	1557
MseI	TTAA	2 cut(s)	564, 750
MslI	CAYNNNNRTG	2 cut(s)	819, 957
MspA1I	CMGCKG	2 cut(s)	244, 300
MspR9I	CCNGG	9 cut(s)	146, 263, 273, 285, 286, 1442, 1550, 1605, 1647
MunI	CAATTG	1 cut(s)	689
Mva1269I	GAATGC	1 cut(s)	421
MvaI	CCWGG	4 cut(s)	263, 1550, 1605, 1647
MvnI	CGCG	3 cut(s)	181, 317, 605
MwoI	GCNNNNNNNGC	8 cut(s)	30, 160, 232, 241, 384, 637, 815, 1410
NaeI	GCCGGC	1 cut(s)	186
NarI	GGCGCC	1 cut(s)	269
NciI	CCSGG	5 cut(s)	146, 273, 285, 286, 1442
NcoI	CCATGG	1 cut(s)	1344
NdeII	GATC	5 cut(s)	535, 556, 889, 920, 1153
NgoMIV	GCCGGC	1 cut(s)	184
NheI	GCTAGC	1 cut(s)	235
NmuCI	GTSAC	3 cut(s)	229, 476, 599
NspI	RCATGY	2 cut(s)	1474, 1586
NspV	TTCGAA	1 cut(s)	587
PaeI	GCATGC	1 cut(s)	1474
PciSI	GCTCTTC	1 cut(s)	1755
PcsI	WCGNNNNNNNCGW	8 cut(s)	62, 68, 71, 74, 86, 95, 185, 470
PctI	GAATGC	1 cut(s)	421
PdiI	GCCGGC	1 cut(s)	186
PdmI	GAANNNNTTC	1 cut(s)	1557
PfeI	GAWTC	5 cut(s)	190, 589, 611, 698, 1697
Pfl23II	CGTACG	1 cut(s)	207
PflFI	GACNNNGTC	1 cut(s)	76
PinAI	ACCGGT	1 cut(s)	860
PleI	GAGTC	3 cut(s)	483, 1122, 1235
PluTI	GGCGCC	1 cut(s)	272
PpsI	GAGTC	3 cut(s)	483, 1122, 1235
PshAI	GACNNNNGTC	1 cut(s)	436
PsiI	TTATAA	3 cut(s)	732, 884, 1812
Psp124BI	GAGCTC	1 cut(s)	656
Psp6I	CCWGG	4 cut(s)	261, 1548, 1603, 1645
PspEI	GGTNACC	1 cut(s)	1709
PspFI	CCCAGC	1 cut(s)	240
PspGI	CCWGG	4 cut(s)	261, 1548, 1603, 1645
PspLI	CGTACG	1 cut(s)	207
PspOMI	GGGCCC	1 cut(s)	453
PspPI	GGNCC	7 cut(s)	255, 275, 280, 438, 453, 454, 1663
PsrI	GAACNNNNNNTAC	1 cut(s)	34
PstNI	CAGNNNCTG	2 cut(s)	121, 762
PsuI	RGATCY	3 cut(s)	556, 889, 920
PsyI	GACNNNGTC	1 cut(s)	76
PvuII	CAGCTG	1 cut(s)	244
RsaI	GTAC	8 cut(s)	5, 158, 209, 766, 799, 833, 1031, 1108
RsaNI	GTAC	8 cut(s)	4, 157, 208, 765, 798, 832, 1030, 1107
RseI	CAYNNNNRTG	2 cut(s)	819, 957
SacI	GAGCTC	1 cut(s)	656
SapI	GCTCTTC	1 cut(s)	1755
SaqAI	TTAA	2 cut(s)	564, 750
Sau3AI	GATC	5 cut(s)	535, 556, 889, 920, 1153
Sau96I	GGNCC	7 cut(s)	255, 275, 280, 438, 453, 454, 1663
SchI	GAGTC	3 cut(s)	484, 1123, 1235
ScrFI	CCNGG	9 cut(s)	146, 263, 273, 285, 286, 1442, 1550, 1605, 1647
SduI	GDGCHC	4 cut(s)	457, 656, 724, 1527
SexAI	ACCWGGT	1 cut(s)	1603
SfaNI	GCATC	1 cut(s)	1577
SfcI	CTRYAG	2 cut(s)	1011, 1804
SfoI	GGCGCC	1 cut(s)	270
SfuI	TTCGAA	1 cut(s)	587
SgrAI	CRCCGGYG	1 cut(s)	1371
SinI	GGWCC	3 cut(s)	280, 438, 1663
SmaI	CCCGGG	1 cut(s)	286
SmiMI	CAYNNNNRTG	2 cut(s)	819, 957
SpeI	ACTAGT	1 cut(s)	1498
SphI	GCATGC	1 cut(s)	1474
Sse9I	AATT	5 cut(s)	541, 583, 689, 939, 1590
SspDI	GGCGCC	1 cut(s)	268
SspMI	CTAG	7 cut(s)	236, 434, 1499, 1533, 1653, 1754, 1761
SstI	GAGCTC	1 cut(s)	656
StyD4I	CCNGG	9 cut(s)	144, 261, 271, 283, 284, 1440, 1548, 1603, 1645
StyI	CCWWGG	2 cut(s)	621, 1344
TaaI	ACNGT	3 cut(s)	17, 1015, 1165
TaiI	ACGT	3 cut(s)	59, 80, 95
TaqI	TCGA	3 cut(s)	473, 587, 1784
TasI	AATT	5 cut(s)	541, 583, 689, 939, 1590
TatI	WGTACW	2 cut(s)	3, 1106
TauI	GCSGC	6 cut(s)	184, 269, 320, 323, 1077, 1366
TfiI	GAWTC	5 cut(s)	190, 589, 611, 698, 1697
Tru1I	TTAA	2 cut(s)	564, 750
Tru9I	TTAA	2 cut(s)	564, 750
TscAI	CASTG	4 cut(s)	912, 1411, 1514, 1570
TseFI	GTSAC	3 cut(s)	229, 476, 599
TseI	GCWGC	4 cut(s)	24, 163, 196, 809
Tsp45I	GTSAC	3 cut(s)	229, 476, 599
TspDTI	ATGAA	1 cut(s)	23
TspGWI	ACGGA	1 cut(s)	1833
TspMI	CCCGGG	1 cut(s)	284
TspRI	CASTG	4 cut(s)	912, 1411, 1514, 1570
Tth111I	GACNNNGTC	1 cut(s)	76
VpaK11BI	GGWCC	3 cut(s)	280, 438, 1663
XagI	CCTNNNNNAGG	1 cut(s)	125
XapI	RAATTY	1 cut(s)	1590
XceI	RCATGY	2 cut(s)	1474, 1586
XcmI	CCANNNNNNNNNTGG	1 cut(s)	945
XmaI	CCCGGG	1 cut(s)	284
XmnI	GAANNNNTTC	1 cut(s)	1557
XspI	CTAG	7 cut(s)	236, 434, 1499, 1533, 1653, 1754, 1761
ZraI	GACGTC	2 cut(s)	78, 93

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.