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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09032 AT5G01225 |
| fragaria_vesca | FvH4_6g11920 |
| malus_domestica | MD12G1161500.v1.1 |
| prunus_persica | Prupe.6G271900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0463681 |
| rosa_laevigata | RLG00000024764 |
| rosa_multiflora | Rmu_sc0003267.1_g000032 |
| rosa_roxburghii | Rroxscaffold_6G00416370 |
| rosa_rugosa | Rorug03G0066900 |
| rosa_samantha | Rh3AG124000 Rh3BG128600 Rh3CG130800 Rh3DG129200 |
| rosa_wichuraiana | Rw3G010480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 81, 87, 241 |
| AclWI | GGATC | 1 cut(s) | 293 |
| AcsI | RAATTY | 3 cut(s) | 126, 352, 379 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 129 |
| AgsI | TTSAA | 2 cut(s) | 323, 384 |
| AluBI | AGCT | 2 cut(s) | 14, 326 |
| AluI | AGCT | 2 cut(s) | 14, 326 |
| Alw21I | GWGCWC | 1 cut(s) | 165 |
| AlwI | GGATC | 1 cut(s) | 293 |
| ApeKI | GCWGC | 2 cut(s) | 78, 359 |
| ApoI | RAATTY | 3 cut(s) | 126, 352, 379 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 379 |
| AsuHPI | GGTGA | 2 cut(s) | 37, 130 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 144, 177 |
| Bbv12I | GWGCWC | 1 cut(s) | 165 |
| BbvI | GCAGC | 2 cut(s) | 90, 346 |
| BccI | CCATC | 1 cut(s) | 182 |
| BciVI | GTATCC | 1 cut(s) | 304 |
| BfaI | CTAG | 2 cut(s) | 15, 210 |
| BfuI | GTATCC | 1 cut(s) | 304 |
| BisI | GCNGC | 3 cut(s) | 79, 88, 360 |
| BlsI | GCNGC | 3 cut(s) | 80, 89, 361 |
| BmiI | GGNNCC | 1 cut(s) | 91 |
| BmsI | GCATC | 1 cut(s) | 348 |
| BpmI | CTGGAG | 1 cut(s) | 76 |
| BsaWI | WCCGGW | 1 cut(s) | 122 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 13, 43 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 129 |
| BseMII | CTCAG | 1 cut(s) | 208 |
| BseXI | GCAGC | 2 cut(s) | 90, 346 |
| BsiHKAI | GWGCWC | 1 cut(s) | 165 |
| BsiSI | CCGG | 1 cut(s) | 123 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 1 cut(s) | 165 |
| Bsp143I | GATC | 1 cut(s) | 298 |
| BspACI | CCGC | 3 cut(s) | 81, 87, 241 |
| BspCNI | CTCAG | 1 cut(s) | 207 |
| BspLI | GGNNCC | 1 cut(s) | 91 |
| BspPI | GGATC | 1 cut(s) | 293 |
| BssMI | GATC | 1 cut(s) | 298 |
| BstDEI | CTNAG | 1 cut(s) | 194 |
| BstEII | GGTNACC | 1 cut(s) | 118 |
| BstKTI | GATC | 1 cut(s) | 301 |
| BstMBI | GATC | 1 cut(s) | 298 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 84, 87 |
| BstPI | GGTNACC | 1 cut(s) | 118 |
| BstV1I | GCAGC | 2 cut(s) | 90, 346 |
| BsuI | GTATCC | 1 cut(s) | 304 |
| BtsI | GCAGTG | 1 cut(s) | 222 |
| BtsIMutI | CAGTG | 1 cut(s) | 222 |
| CviAII | CATG | 1 cut(s) | 205 |
| CviJI | RGCY | 5 cut(s) | 14, 55, 90, 209, 326 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 55, 90, 209, 326 |
| DdeI | CTNAG | 1 cut(s) | 194 |
| DpnI | GATC | 1 cut(s) | 300 |
| DpnII | GATC | 1 cut(s) | 298 |
| Eco91I | GGTNACC | 1 cut(s) | 118 |
| EcoO65I | GGTNACC | 1 cut(s) | 118 |
| EcoRI | GAATTC | 1 cut(s) | 352 |
| FaeI | CATG | 1 cut(s) | 208 |
| FaiI | YATR | 4 cut(s) | 62, 206, 227, 305 |
| FatI | CATG | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 3 cut(s) | 79, 88, 360 |
| Fsp4HI | GCNGC | 3 cut(s) | 79, 88, 360 |
| FspBI | CTAG | 2 cut(s) | 15, 210 |
| GluI | GCNGC | 3 cut(s) | 79, 88, 360 |
| GsuI | CTGGAG | 1 cut(s) | 76 |
| HapII | CCGG | 1 cut(s) | 123 |
| Hin1II | CATG | 1 cut(s) | 208 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HindIII | AAGCTT | 1 cut(s) | 324 |
| HinfI | GANTC | 1 cut(s) | 308 |
| HpaII | CCGG | 1 cut(s) | 123 |
| HphI | GGTGA | 2 cut(s) | 37, 130 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 3 cut(s) | 69, 197, 298 |
| Hpy188III | TCNNGA | 4 cut(s) | 38, 93, 349, 390 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyAV | CCTTC | 1 cut(s) | 247 |
| HpyCH4V | TGCA | 4 cut(s) | 222, 233, 339, 370 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 84, 87 |
| HpyF3I | CTNAG | 1 cut(s) | 194 |
| Hsp92II | CATG | 1 cut(s) | 208 |
| Kzo9I | GATC | 1 cut(s) | 298 |
| LmnI | GCTCC | 2 cut(s) | 95, 111 |
| LpnPI | CCDG | 9 cut(s) | 51, 59, 94, 100, 106, 124, 136, 287, 362 |
| Lsp1109I | GCAGC | 2 cut(s) | 90, 346 |
| LweI | GCATC | 1 cut(s) | 348 |
| MaeI | CTAG | 2 cut(s) | 15, 210 |
| MaeIII | GTNAC | 1 cut(s) | 118 |
| MalI | GATC | 1 cut(s) | 300 |
| MboI | GATC | 1 cut(s) | 298 |
| MhlI | GDGCHC | 1 cut(s) | 165 |
| MluCI | AATT | 5 cut(s) | 57, 126, 352, 379, 384 |
| MmeI | TCCRAC | 1 cut(s) | 291 |
| MnlI | CCTC | 3 cut(s) | 15, 243, 325 |
| MroXI | GAANNNNTTC | 1 cut(s) | 379 |
| MspA1I | CMGCKG | 1 cut(s) | 81 |
| MspI | CCGG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 84, 87 |
| NdeII | GATC | 1 cut(s) | 298 |
| NlaIII | CATG | 1 cut(s) | 208 |
| NlaIV | GGNNCC | 1 cut(s) | 91 |
| NmuCI | GTSAC | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 1 cut(s) | 379 |
| PfeI | GAWTC | 1 cut(s) | 308 |
| PflFI | GACNNNGTC | 1 cut(s) | 280 |
| PkrI | GCNGC | 3 cut(s) | 80, 89, 361 |
| PspEI | GGTNACC | 1 cut(s) | 118 |
| PspN4I | GGNNCC | 1 cut(s) | 91 |
| PsyI | GACNNNGTC | 1 cut(s) | 280 |
| SatI | GCNGC | 3 cut(s) | 79, 88, 360 |
| Sau3AI | GATC | 1 cut(s) | 298 |
| SduI | GDGCHC | 1 cut(s) | 165 |
| SetI | ASST | 8 cut(s) | 16, 103, 143, 258, 276, 284, 290, 328 |
| SfaNI | GCATC | 1 cut(s) | 348 |
| Sse9I | AATT | 5 cut(s) | 57, 126, 352, 379, 384 |
| SsiI | CCGC | 3 cut(s) | 81, 87, 241 |
| SspMI | CTAG | 2 cut(s) | 15, 210 |
| TaqI | TCGA | 3 cut(s) | 248, 316, 342 |
| TasI | AATT | 5 cut(s) | 57, 126, 352, 379, 384 |
| TauI | GCSGC | 1 cut(s) | 90 |
| TfiI | GAWTC | 1 cut(s) | 308 |
| TscAI | CASTG | 1 cut(s) | 222 |
| TseFI | GTSAC | 1 cut(s) | 118 |
| TseI | GCWGC | 2 cut(s) | 78, 359 |
| Tsp45I | GTSAC | 1 cut(s) | 118 |
| TspDTI | ATGAA | 1 cut(s) | 63 |
| TspRI | CASTG | 1 cut(s) | 222 |
| Tth111I | GACNNNGTC | 1 cut(s) | 280 |
| XapI | RAATTY | 3 cut(s) | 126, 352, 379 |
| XmnI | GAANNNNTTC | 1 cut(s) | 379 |
| XspI | CTAG | 2 cut(s) | 15, 210 |