Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
4106232 .. 4107214
MD13G1058800.v1.1.491
Length: 216 bp
ATGAAGAAACTTTTGAAGCAAGAAGCTAAAGAGGCTATTCGTGAACTGCGTAAGGATAATTCTTTCCTTTACGAGATGAAGGCAAGGGATAAGGCGCTGATGGAAGAAGAGAAAGCTGAGAAATATGGAAAAGTACGACTTTTCCTACAAGAGCAAGAACACGCTATGAAGTCTGGGCAATTAGGAAAGGGCAAAGGCAACAAGAGAAGGCGATGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
9.99
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Nop14 |
PF04147 |
1 - 54 |
6.2e-10 |
Nop14-like family |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
Style Settings
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Publication-ready
Orthologous Genes
(Group: OG0018482)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AfaI |
GTAC |
1 cut(s)
|
135 |
| AgsI |
TTSAA |
1 cut(s)
|
16 |
| AluBI |
AGCT |
2 cut(s)
|
26, 116 |
| AluI |
AGCT |
2 cut(s)
|
26, 116 |
| AspLEI |
GCGC |
1 cut(s)
|
97 |
| BccI |
CCATC |
1 cut(s)
|
94 |
| BfoI |
RGCGCY |
1 cut(s)
|
98 |
| BseMII |
CTCAG |
1 cut(s)
|
108 |
| BspCNI |
CTCAG |
1 cut(s)
|
109 |
| Bst6I |
CTCTTC |
1 cut(s)
|
102 |
| BstDEI |
CTNAG |
1 cut(s)
|
117 |
| BstH2I |
RGCGCY |
1 cut(s)
|
98 |
| BstHHI |
GCGC |
1 cut(s)
|
97 |
| BstMWI |
GCNNNNNNNGC |
1 cut(s)
|
32 |
| CfoI |
GCGC |
1 cut(s)
|
97 |
| Csp6I |
GTAC |
1 cut(s)
|
134 |
| CviJI |
RGCY |
3 cut(s)
|
26, 35, 116 |
| CviKI_1 |
RGCY |
3 cut(s)
|
26, 35, 116 |
| CviQI |
GTAC |
1 cut(s)
|
134 |
| DdeI |
CTNAG |
1 cut(s)
|
117 |
| Eam1104I |
CTCTTC |
1 cut(s)
|
102 |
| EarI |
CTCTTC |
1 cut(s)
|
102 |
| FaiI |
YATR |
2 cut(s)
|
126, 167 |
| FalI |
AAGNNNNNCTT |
2 cut(s)
|
123, 155 |
| GlaI |
GCGC |
1 cut(s)
|
96 |
| HaeII |
RGCGCY |
1 cut(s)
|
98 |
| HhaI |
GCGC |
1 cut(s)
|
97 |
| Hin6I |
GCGC |
1 cut(s)
|
95 |
| HinP1I |
GCGC |
1 cut(s)
|
95 |
| Hpy166II |
GTNNAC |
1 cut(s)
|
44 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
41 |
| Hpy8I |
GTNNAC |
1 cut(s)
|
44 |
| HpyAV |
CCTTC |
2 cut(s)
|
73, 201 |
| HpyF10VI |
GCNNNNNNNGC |
1 cut(s)
|
32 |
| HpyF3I |
CTNAG |
1 cut(s)
|
117 |
| HspAI |
GCGC |
1 cut(s)
|
95 |
| LpnPI |
CCDG |
1 cut(s)
|
159 |
| MboII |
GAAGA |
3 cut(s)
|
16, 116, 119 |
| MluCI |
AATT |
2 cut(s)
|
58, 179 |
| MnlI |
CCTC |
1 cut(s)
|
25 |
| MwoI |
GCNNNNNNNGC |
1 cut(s)
|
32 |
| PcsI |
WCGNNNNNNNCGW |
1 cut(s)
|
46 |
| RsaI |
GTAC |
1 cut(s)
|
135 |
| RsaNI |
GTAC |
1 cut(s)
|
134 |
| SetI |
ASST |
2 cut(s)
|
28, 118 |
| SgeI |
CNNG |
8 cut(s)
|
32, 53, 85, 96, 161, 167, 173, 186 |
| Sse9I |
AATT |
2 cut(s)
|
58, 179 |
| TasI |
AATT |
2 cut(s)
|
58, 179 |
| TspDTI |
ATGAA |
3 cut(s)
|
17, 92, 182 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.