Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0009556

Physical Location & Seq

Genomic Coordinates Reverse (-)

8001824 .. 8005724

Gene Structure 3901 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1110100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGCCTCCGAAAGGCAAAGACAAGCAGCGCGCCGCCGCGTCGCCGCAGCAGCCGCCGCCTTCACTTGAAGATCTCTTCAGTTCTCTCAATAAGCACATCGAGGAATCCGAATTCGAAAATGCCGTCAAGGTTGCAGATCAAGTTCTCTCGATTAACCGTGGCGATGAGGACGCACTTCGATGCAAGGTCGTGGCCTTGATCAAGGCCGACGACATTGACGCCGCCCTTTCCACGATTCGATCTTCCAAGAGTCCTCCCGCGGATTTCAGCTTCTTTGAGGCATACTGCTTATACAGAAATAACAAGCTAGATGAAGCTCTCGAGTCCTTGAAGAGGCAAGAGAGAGATTCTGTAACCATGATATTAGAATCCCAGATTTTATTTCGCTCAGGAAAGATGGATGCTTGTATTGATATATATCAGAACCTTCCAAAACCCAAGGTCGAATTGTTAGAGATAAATTCTGCAGCTAGTTTGGTTGCAGCTGGAAGGGCATCTGAAGTTAAACGTACACTGGAAGCACTTGGGGTTAAAGCAACTAACAGTTTTATGCTTGCATTCAACACTGCCTGTTCTTTGGTTCAATTGCAAAAGTATACAGAGGCAGAGCAGCTCCTTCTGAAAGCCAGAAGAATTGGCCAGGAAGAACTCTTCTCTGATAATGTACCTGAAGACAAAATACAAATTGAATTGGCGCCAATAGCTGTCCAGTTGGCCTATGTTCAGCAGCTTCTTGGGCAGAAACAAGAGGCCATCGAAGCTTATACGGACATTATTAAACAAGATATGGCAGATGAGGTATCGCTTGGTGTGGCAGTCAACAACCTCATTGCTTTGAGAGGTCCAAGAGATGTTTCTGATGGCCTGAAGAAACTTGATCGACTAAAAGATAAGGACAAGCAAAACTTCCATATGACTCCTGGACTAGACAACAAGCTTTCACCAAAACAAAAAGAATCAATATACGTGAACCGGGTTCTTCTACTACTCCATGCGAATAAAATGGATCAGGCTCGAGAAATCGTTGCTGCACTGCCTGACATGTTTCCTGATAGCGTGATGCCTGTGTTACTTCAAGCTGCAGTTTTTGTAAGAGAGAACAGGGCTGGGAAAGCTGAAGAAATTTTAGGGCAGTTTTCCAAGAAGTTCCCTGACAAATCCAAGGTGGTTCTCTTAGTGAGGGCACAGGTTGCTGCTGCTGCTGGCCACCCTCTTATTGCAGCTGAGTCTCTTGGTAAGATACCTGATATACAGCACATGCCTGCCACTGTTGCTACTCTTGTGTCTCTTAGAGAGCGTGCCGGGGACATTGATGGTGCAACTGCTGTTCTTGATGCTGCAATCAACTGGTGGTCAAATGCCATGACTGAGGACAATAAGCTTAGCGTTTTAATGCAAGAGGCTGCTTCGTTCAAGCTCCGGCATGGCCGAGAAGAGGAGGCTGCCCGTCTATATGAGGAGCTTGTGAAAAGCCATGGAAGTGTGGAAGCATTGGTTGGGCTTGTAACTACAGTTGCTCGTGTGGATGTTAAGAAGGCAGAAGCTTATGAGCAGAAGCTGAAACCGTTACCAGGTTTGAAGGGGGTCAATGTGGATAGTCTGGAGAAGACTTCTGGGGCCAAACACAATGAGGGTGTATCTCATGTTAAGATCACGGAGACATATGATGAGGGGAAGACTAAGGCCAAGGCAAAGAGAAAGAGAAAGAGAAAGCCAAAGTATCCTAAAGGGTTTGACCCTGCAAACCCGGGGCCACCGCCAGATCCCGAGAGGTGGCTCCCCAAGAGAGAAAGGTCAAGTTACAGGCCCAAGAGAAAGGATAAAAGAGCAGCTCAGGTAAGAGGCTCCCAGGGTTCTGTAGCTAGAGATAAACATGAAACTGGTGCCGCTTCCAACACTTCAAACACAAAATCAAACCAAGCAGCTACCTCAAAAGGAGCCTCCCAAAATGCAGTTGCAGAGCCATCCAAGCCTTCTTCATCAAAGTCGCGAAAAAAATCTAGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005047 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005786 GO:0005829 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006616 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008312 GO:0012505 GO:0015031 GO:0015833 GO:0019904 GO:0030911 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042493 GO:0042886 GO:0043021 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0045047 GO:0045184 GO:0046907 GO:0048500 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0070972 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

SRP72 SRP_TPR_like

Protein Analysis

670

Amino Acids

73.61

Weight (kDa)

9.27

Isoelectric Point (pI)

45.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SRP_TPR_like	PF17004	59 - 144	1.5e-06	Putative TPR-like repeat
SRP72	PF08492	555 - 603	1.6e-16	SRP72 RNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67650 AT1G67680
fragaria_vesca	FvH4_4g24580 FvH4_4g24580 FvH4_4g24580
malus_domestica	MD13G1110100.v1.1 MD16G1110000.v1.1
prunus_persica	Prupe.1G234800_v2.0.a1 Prupe.1G234800_v2.0.a1
pyrus_communis	pycom13g09580 pycom16g09350
rosa_chinensis	RchiOBHm_Chr4g0431561 RchiOBHm_Chr4g0431581
rosa_laevigata	RLG00000006906
rosa_multiflora	Rmu_sc0008423.1_g000002
rosa_roxburghii	Rroxscaffold_5G00373040
rosa_rugosa	Rorug04G0251000
rosa_samantha	Rh4AG307700 Rh4BG315300 Rh4CG330800 Rh4DG310200
rosa_wichuraiana	Rw4G026670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	694, 1883
AccI	GTMKAC	1 cut(s)	596
AccII	CGCG	4 cut(s)	30, 38, 260, 1990
AclWI	GGATC	2 cut(s)	1014, 1757
AcoI	YGGCCR	3 cut(s)	637, 1204, 1426
AcsI	RAATTY	3 cut(s)	110, 460, 1122
AcuI	CTGAAG	5 cut(s)	61, 519, 690, 887, 1137
AcyI	GRCGYC	2 cut(s)	219, 695
AfaI	GTAC	2 cut(s)	511, 666
AfiI	CCNNNNNNNGG	5 cut(s)	11, 333, 1435, 1571, 1773
AflIII	ACRYGT	1 cut(s)	1041
AgsI	TTSAA	9 cut(s)	68, 331, 562, 584, 689, 1076, 1414, 1579, 1902
AjnI	CCWGG	4 cut(s)	639, 919, 1570, 1848
AjuI	GAANNNNNNNTTGG	4 cut(s)	838, 870, 1479, 1511
Alw26I	GTCTC	3 cut(s)	1233, 1290, 1652
AlwI	GGATC	2 cut(s)	1014, 1757
AlwNI	CAGNNNCTG	1 cut(s)	1558
Ama87I	CYCGRG	4 cut(s)	320, 1014, 1747, 1766
ApoI	RAATTY	3 cut(s)	110, 460, 1122
ArsI	GACNNNNNNTTYG	2 cut(s)	108, 140
AspLEI	GCGC	3 cut(s)	30, 32, 697
AspS9I	GGNCC	4 cut(s)	842, 1617, 1751, 1806
AsuC2I	CCSGG	4 cut(s)	974, 1303, 1748, 1749
AsuHPI	GGTGA	1 cut(s)	933
AsuII	TTCGAA	1 cut(s)	114
AvaI	CYCGRG	4 cut(s)	320, 1014, 1747, 1766
AvaII	GGWCC	1 cut(s)	842
BaeGI	GKGCMC	1 cut(s)	1186
BalI	TGGCCA	2 cut(s)	639, 1206
BanI	GGYRCC	2 cut(s)	694, 1883
BarI	GAAGNNNNNNTAC	2 cut(s)	663, 695
BauI	CACGAG	1 cut(s)	1518
BbsI	GAAGAC	3 cut(s)	678, 1613, 1682
BccI	CCATC	5 cut(s)	391, 761, 854, 1307, 1972
BceAI	ACGGC	1 cut(s)	107
BciT130I	CCWGG	4 cut(s)	641, 921, 1572, 1850
BciVI	GTATCC	1 cut(s)	1731
BclI	TGATCA	1 cut(s)	198
BcnI	CCSGG	4 cut(s)	974, 1303, 1748, 1749
BcoDI	GTCTC	3 cut(s)	1233, 1290, 1652
BfaI	CTAG	6 cut(s)	308, 471, 926, 1863, 2001, 2008
BfmI	CTRYAG	4 cut(s)	465, 1080, 1509, 1857
BfoI	RGCGCY	1 cut(s)	698
BfuI	GTATCC	1 cut(s)	1731
BglII	AGATCT	1 cut(s)	70
BlpI	GCTNAGC	1 cut(s)	1382
Bme1390I	CCNGG	8 cut(s)	641, 921, 974, 1303, 1572, 1748, 1749, 1850
Bme18I	GGWCC	1 cut(s)	842
BmeT110I	CYCGRG	4 cut(s)	320, 1014, 1747, 1766
BmgT120I	GGNCC	4 cut(s)	842, 1617, 1751, 1806
BmiI	GGNNCC	7 cut(s)	696, 1618, 1752, 1778, 1846, 1885, 1939
BmrFI	CCNGG	8 cut(s)	641, 921, 974, 1303, 1572, 1748, 1749, 1850
BmsI	GCATC	5 cut(s)	170, 391, 503, 1050, 1324
BpiI	GAAGAC	3 cut(s)	678, 1613, 1682
BpmI	CTGGAG	1 cut(s)	1622
Bpu10I	CCTNAGC	2 cut(s)	388, 1833
Bpu1102I	GCTNAGC	1 cut(s)	1382
Bpu14I	TTCGAA	1 cut(s)	114
BpuMI	CCSGG	4 cut(s)	974, 1303, 1748, 1749
BsaAI	YACGTR	1 cut(s)	967
BsaBI	GATNNNNATC	1 cut(s)	417
BsaHI	GRCGYC	2 cut(s)	219, 695
Bsc4I	CCNNNNNNNGG	5 cut(s)	11, 333, 1435, 1571, 1773
Bse1I	ACTGG	4 cut(s)	519, 709, 1352, 1885
Bse3DI	GCAATG	1 cut(s)	828
Bse8I	GATNNNNATC	1 cut(s)	417
BseBI	CCWGG	4 cut(s)	641, 921, 1572, 1850
BseGI	GGATG	3 cut(s)	406, 1531, 1964
BseJI	GATNNNNATC	1 cut(s)	417
BseLI	CCNNNNNNNGG	5 cut(s)	11, 333, 1435, 1571, 1773
BseMI	GCAATG	1 cut(s)	828
BseMII	CTCAG	4 cut(s)	402, 1215, 1359, 1847
BseNI	ACTGG	4 cut(s)	519, 709, 1352, 1885
BsePI	GCGCGC	1 cut(s)	28
BseRI	GAGGAG	2 cut(s)	1451, 1472
BseSI	GKGCMC	1 cut(s)	1186
BseYI	CCCAGC	1 cut(s)	1106
BsgI	GTGCAG	1 cut(s)	1014
Bsh1236I	CGCG	4 cut(s)	30, 38, 260, 1990
BshNI	GGYRCC	2 cut(s)	694, 1883
BsiHKCI	CYCGRG	4 cut(s)	320, 1014, 1747, 1766
BsiSI	CCGG	4 cut(s)	973, 1302, 1420, 1748
BslFI	GGGAC	1 cut(s)	1319
BslI	CCNNNNNNNGG	5 cut(s)	11, 333, 1435, 1571, 1773
BsmAI	GTCTC	3 cut(s)	1233, 1290, 1652
BsmFI	GGGAC	1 cut(s)	1319
BsmI	GAATGC	1 cut(s)	557
BsoBI	CYCGRG	4 cut(s)	320, 1014, 1747, 1766
Bsp119I	TTCGAA	1 cut(s)	114
Bsp1286I	GDGCHC	1 cut(s)	1186
Bsp143I	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
Bsp1720I	GCTNAGC	1 cut(s)	1382
Bsp19I	CCATGG	1 cut(s)	1474
Bsp68I	TCGCGA	1 cut(s)	1990
BspCNI	CTCAG	4 cut(s)	401, 1216, 1360, 1846
BspFNI	CGCG	4 cut(s)	30, 38, 260, 1990
BspLI	GGNNCC	7 cut(s)	696, 1618, 1752, 1778, 1846, 1885, 1939
BspMAI	CTGCAG	2 cut(s)	469, 1084
BspPI	GGATC	2 cut(s)	1014, 1757
BspT104I	TTCGAA	1 cut(s)	114
BspT107I	GGYRCC	2 cut(s)	694, 1883
BsrDI	GCAATG	1 cut(s)	828
BsrI	ACTGG	4 cut(s)	519, 709, 1352, 1885
BssHII	GCGCGC	1 cut(s)	28
BssMI	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
BssNAI	GTATAC	1 cut(s)	597
BssNI	GRCGYC	2 cut(s)	219, 695
BssSI	CACGAG	1 cut(s)	1518
BssT1I	CCWWGG	4 cut(s)	438, 1161, 1474, 1686
Bst1107I	GTATAC	1 cut(s)	597
Bst2BI	CACGAG	1 cut(s)	1518
Bst2UI	CCWGG	4 cut(s)	641, 921, 1572, 1850
Bst4CI	ACNGT	5 cut(s)	158, 545, 1270, 1513, 1566
Bst6I	CTCTTC	4 cut(s)	80, 326, 656, 1428
BstACI	GRCGYC	2 cut(s)	219, 695
BstAPI	GCANNNNNTGC	1 cut(s)	1190
BstBAI	YACGTR	1 cut(s)	967
BstBI	TTCGAA	1 cut(s)	114
BstC8I	GCNNGC	5 cut(s)	30, 555, 1204, 1263, 1299
BstDEI	CTNAG	8 cut(s)	388, 1174, 1224, 1289, 1368, 1382, 1680, 1833
BstDSI	CCRYGG	3 cut(s)	157, 258, 1474
BstENI	CCTNNNNNAGG	2 cut(s)	9, 331
BstF5I	GGATG	3 cut(s)	406, 1531, 1964
BstFNI	CGCG	4 cut(s)	30, 38, 260, 1990
BstH2I	RGCGCY	1 cut(s)	698
BstHHI	GCGC	3 cut(s)	30, 32, 697
BstKTI	GATC	8 cut(s)	73, 139, 201, 242, 880, 1009, 1653, 1765
BstMAI	GTCTC	3 cut(s)	1233, 1290, 1652
BstMBI	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
BstNI	CCWGG	4 cut(s)	641, 921, 1572, 1850
BstNSI	RCATGY	2 cut(s)	1045, 1261
BstSCI	CCNGG	8 cut(s)	639, 919, 972, 1301, 1570, 1746, 1747, 1848
BstSFI	CTRYAG	4 cut(s)	465, 1080, 1509, 1857
BstSLI	GKGCMC	1 cut(s)	1186
BstUI	CGCG	4 cut(s)	30, 38, 260, 1990
BstV2I	GAAGAC	3 cut(s)	678, 1613, 1682
BstX2I	RGATCY	2 cut(s)	70, 1762
BstYI	RGATCY	2 cut(s)	70, 1762
BstZ17I	GTATAC	1 cut(s)	597
BsuI	GTATCC	1 cut(s)	1731
BtgI	CCRYGG	3 cut(s)	157, 258, 1474
BtgZI	GCGATG	1 cut(s)	177
BtsCI	GGATG	3 cut(s)	406, 1531, 1964
BtsI	GCAGTG	2 cut(s)	564, 1031
BtsIMutI	CAGTG	4 cut(s)	512, 564, 1031, 1266
BtuMI	TCGCGA	1 cut(s)	1990
Cac8I	GCNNGC	5 cut(s)	30, 555, 1204, 1263, 1299
CaiI	CAGNNNCTG	1 cut(s)	1558
CfoI	GCGC	3 cut(s)	30, 32, 697
Cfr13I	GGNCC	4 cut(s)	842, 1617, 1751, 1806
Cfr42I	CCGCGG	1 cut(s)	261
Cfr9I	CCCGGG	1 cut(s)	1747
CseI	GACGC	3 cut(s)	27, 179, 227
CsiI	ACCWGGT	1 cut(s)	1570
Csp6I	GTAC	2 cut(s)	510, 665
CviAII	CATG	9 cut(s)	358, 992, 1042, 1258, 1363, 1424, 1475, 1643, 1874
CviQI	GTAC	2 cut(s)	510, 665
DdeI	CTNAG	8 cut(s)	388, 1174, 1224, 1289, 1368, 1382, 1680, 1833
DinI	GGCGCC	1 cut(s)	696
DpnI	GATC	8 cut(s)	72, 138, 200, 241, 879, 1008, 1652, 1764
DpnII	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
EaeI	YGGCCR	3 cut(s)	637, 1204, 1426
Eam1104I	CTCTTC	4 cut(s)	80, 326, 656, 1428
EarI	CTCTTC	4 cut(s)	80, 326, 656, 1428
Eco130I	CCWWGG	4 cut(s)	438, 1161, 1474, 1686
Eco47I	GGWCC	1 cut(s)	842
Eco57I	CTGAAG	5 cut(s)	61, 519, 690, 887, 1137
Eco88I	CYCGRG	4 cut(s)	320, 1014, 1747, 1766
EcoNI	CCTNNNNNAGG	2 cut(s)	9, 331
EcoRI	GAATTC	1 cut(s)	110
EcoRII	CCWGG	4 cut(s)	639, 919, 1570, 1848
EcoT14I	CCWWGG	4 cut(s)	438, 1161, 1474, 1686
EgeI	GGCGCC	1 cut(s)	696
EheI	GGCGCC	1 cut(s)	696
ErhI	CCWWGG	4 cut(s)	438, 1161, 1474, 1686
FaeI	CATG	9 cut(s)	361, 995, 1045, 1261, 1366, 1427, 1478, 1646, 1877
FalI	AAGNNNNNCTT	2 cut(s)	890, 922
FaqI	GGGAC	1 cut(s)	1319
FatI	CATG	9 cut(s)	357, 991, 1041, 1257, 1362, 1423, 1474, 1642, 1873
FauI	CCCGC	1 cut(s)	265
FauNDI	CATATG	2 cut(s)	912, 1663
FbaI	TGATCA	1 cut(s)	198
FblI	GTMKAC	1 cut(s)	596
FokI	GGATG	3 cut(s)	413, 1538, 1951
FspBI	CTAG	6 cut(s)	308, 471, 926, 1863, 2001, 2008
GlaI	GCGC	3 cut(s)	29, 31, 696
GsaI	CCCAGC	1 cut(s)	1110
GsuI	CTGGAG	1 cut(s)	1622
HaeII	RGCGCY	1 cut(s)	698
HapII	CCGG	4 cut(s)	973, 1302, 1420, 1748
HgaI	GACGC	3 cut(s)	27, 179, 227
HhaI	GCGC	3 cut(s)	30, 32, 697
Hin1I	GRCGYC	2 cut(s)	219, 695
Hin1II	CATG	9 cut(s)	361, 995, 1045, 1261, 1366, 1427, 1478, 1646, 1877
Hin6I	GCGC	3 cut(s)	28, 30, 695
HinP1I	GCGC	3 cut(s)	28, 30, 695
HincII	GTYRAC	1 cut(s)	820
HindII	GTYRAC	1 cut(s)	820
HindIII	AAGCTT	4 cut(s)	759, 935, 1379, 1542
HinfI	GANTC	9 cut(s)	104, 235, 250, 323, 347, 368, 916, 956, 1226
HpaII	CCGG	4 cut(s)	973, 1302, 1420, 1748
HphI	GGTGA	1 cut(s)	933
Hpy166II	GTNNAC	4 cut(s)	512, 597, 820, 970
Hpy188I	TCNGA	7 cut(s)	9, 109, 423, 499, 621, 658, 859
Hpy188III	TCNNGA	9 cut(s)	148, 320, 390, 1016, 1049, 1331, 1601, 1766, 1989
Hpy8I	GTNNAC	4 cut(s)	512, 597, 820, 970
Hpy99I	CGWCG	2 cut(s)	43, 212
HpyAV	CCTTC	7 cut(s)	69, 437, 483, 626, 1528, 1573, 1983
HpyCH4III	ACNGT	5 cut(s)	158, 545, 1270, 1513, 1566
HpyCH4IV	ACGT	2 cut(s)	508, 966
HpyF3I	CTNAG	8 cut(s)	388, 1174, 1224, 1289, 1368, 1382, 1680, 1833
HpySE526I	ACGT	2 cut(s)	508, 966
Hsp92I	GRCGYC	2 cut(s)	219, 695
Hsp92II	CATG	9 cut(s)	361, 995, 1045, 1261, 1366, 1427, 1478, 1646, 1877
HspAI	GCGC	3 cut(s)	28, 30, 695
KasI	GGCGCC	1 cut(s)	694
Ksp22I	TGATCA	1 cut(s)	198
KspI	CCGCGG	1 cut(s)	261
Kzo9I	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
LmnI	GCTCC	6 cut(s)	618, 1422, 1459, 1782, 1850, 1937
LweI	GCATC	5 cut(s)	170, 391, 503, 1050, 1324
MabI	ACCWGGT	1 cut(s)	1570
MaeI	CTAG	6 cut(s)	308, 471, 926, 1863, 2001, 2008
MaeII	ACGT	2 cut(s)	508, 966
MaeIII	GTNAC	5 cut(s)	352, 1068, 1504, 1566, 1799
MalI	GATC	8 cut(s)	72, 138, 200, 241, 879, 1008, 1652, 1764
MboI	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
MfeI	CAATTG	1 cut(s)	584
MflI	RGATCY	2 cut(s)	70, 1762
MhlI	GDGCHC	1 cut(s)	1186
MlsI	TGGCCA	2 cut(s)	639, 1206
MluCI	AATT	8 cut(s)	110, 446, 460, 584, 633, 684, 689, 1122
MluNI	TGGCCA	2 cut(s)	639, 1206
Mly113I	GGCGCC	1 cut(s)	695
MlyI	GAGTC	4 cut(s)	259, 332, 910, 1235
MmeI	TCCRAC	1 cut(s)	1917
Mox20I	TGGCCA	2 cut(s)	639, 1206
MscI	TGGCCA	2 cut(s)	639, 1206
MseI	TTAA	7 cut(s)	153, 504, 531, 777, 1391, 1530, 1647
MslI	CAYNNNNRTG	2 cut(s)	178, 1479
Msp20I	TGGCCA	2 cut(s)	639, 1206
MspA1I	CMGCKG	3 cut(s)	260, 485, 1223
MspI	CCGG	4 cut(s)	973, 1302, 1420, 1748
MspR9I	CCNGG	8 cut(s)	641, 921, 974, 1303, 1572, 1748, 1749, 1850
MunI	CAATTG	1 cut(s)	584
Mva1269I	GAATGC	1 cut(s)	557
MvaI	CCWGG	4 cut(s)	641, 921, 1572, 1850
MvnI	CGCG	4 cut(s)	30, 38, 260, 1990
NarI	GGCGCC	1 cut(s)	695
NciI	CCSGG	4 cut(s)	974, 1303, 1748, 1749
NcoI	CCATGG	1 cut(s)	1474
NdeI	CATATG	2 cut(s)	912, 1663
NdeII	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
NlaIII	CATG	9 cut(s)	361, 995, 1045, 1261, 1366, 1427, 1478, 1646, 1877
NlaIV	GGNNCC	7 cut(s)	696, 1618, 1752, 1778, 1846, 1885, 1939
NmeAIII	GCCGAG	1 cut(s)	1454
NruI	TCGCGA	1 cut(s)	1990
NspI	RCATGY	2 cut(s)	1045, 1261
NspV	TTCGAA	1 cut(s)	114
PaeR7I	CTCGAG	2 cut(s)	320, 1014
PasI	CCCWGGG	1 cut(s)	1849
PauI	GCGCGC	1 cut(s)	28
PciI	ACATGT	1 cut(s)	1041
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 120
PctI	GAATGC	1 cut(s)	557
PfeI	GAWTC	5 cut(s)	104, 235, 347, 368, 956
PfoI	TCCNGGA	1 cut(s)	919
PleI	GAGTC	4 cut(s)	258, 331, 910, 1234
PluTI	GGCGCC	1 cut(s)	698
PpsI	GAGTC	4 cut(s)	258, 331, 910, 1234
Ppu21I	YACGTR	1 cut(s)	967
PscI	ACATGT	1 cut(s)	1041
Psp6I	CCWGG	4 cut(s)	639, 919, 1570, 1848
PspFI	CCCAGC	1 cut(s)	1106
PspGI	CCWGG	4 cut(s)	639, 919, 1570, 1848
PspN4I	GGNNCC	7 cut(s)	696, 1618, 1752, 1778, 1846, 1885, 1939
PspPI	GGNCC	4 cut(s)	842, 1617, 1751, 1806
PstI	CTGCAG	2 cut(s)	469, 1084
PstNI	CAGNNNCTG	1 cut(s)	1558
PsuI	RGATCY	2 cut(s)	70, 1762
PteI	GCGCGC	1 cut(s)	28
PvuII	CAGCTG	2 cut(s)	485, 1223
RruI	TCGCGA	1 cut(s)	1990
RsaI	GTAC	2 cut(s)	511, 666
RsaNI	GTAC	2 cut(s)	510, 665
RseI	CAYNNNNRTG	2 cut(s)	178, 1479
SacII	CCGCGG	1 cut(s)	261
SaqAI	TTAA	7 cut(s)	153, 504, 531, 777, 1391, 1530, 1647
Sau3AI	GATC	8 cut(s)	70, 136, 198, 239, 877, 1006, 1650, 1762
Sau96I	GGNCC	4 cut(s)	842, 1617, 1751, 1806
SchI	GAGTC	4 cut(s)	259, 332, 910, 1235
ScrFI	CCNGG	8 cut(s)	641, 921, 974, 1303, 1572, 1748, 1749, 1850
SduI	GDGCHC	1 cut(s)	1186
SexAI	ACCWGGT	1 cut(s)	1570
SfaNI	GCATC	5 cut(s)	170, 391, 503, 1050, 1324
SfcI	CTRYAG	4 cut(s)	465, 1080, 1509, 1857
SfoI	GGCGCC	1 cut(s)	696
Sfr274I	CTCGAG	2 cut(s)	320, 1014
Sfr303I	CCGCGG	1 cut(s)	261
SfuI	TTCGAA	1 cut(s)	114
SgrBI	CCGCGG	1 cut(s)	261
SinI	GGWCC	1 cut(s)	842
SlaI	CTCGAG	2 cut(s)	320, 1014
SmaI	CCCGGG	1 cut(s)	1749
SmiMI	CAYNNNNRTG	2 cut(s)	178, 1479
SmlI	CTYRAG	2 cut(s)	320, 1014
SmoI	CTYRAG	2 cut(s)	320, 1014
Sse9I	AATT	8 cut(s)	110, 446, 460, 584, 633, 684, 689, 1122
SspDI	GGCGCC	1 cut(s)	694
SspMI	CTAG	6 cut(s)	308, 471, 926, 1863, 2001, 2008
StyD4I	CCNGG	8 cut(s)	639, 919, 972, 1301, 1570, 1746, 1747, 1848
StyI	CCWWGG	4 cut(s)	438, 1161, 1474, 1686
TaaI	ACNGT	5 cut(s)	158, 545, 1270, 1513, 1566
TaiI	ACGT	2 cut(s)	511, 969
TasI	AATT	8 cut(s)	110, 446, 460, 584, 633, 684, 689, 1122
TauI	GCSGC	7 cut(s)	35, 38, 46, 55, 58, 224, 1889
TfiI	GAWTC	5 cut(s)	104, 235, 347, 368, 956
Tru1I	TTAA	7 cut(s)	153, 504, 531, 777, 1391, 1530, 1647
Tru9I	TTAA	7 cut(s)	153, 504, 531, 777, 1391, 1530, 1647
TscAI	CASTG	4 cut(s)	519, 571, 1038, 1273
TspDTI	ATGAA	3 cut(s)	327, 1890, 1968
TspGWI	ACGGA	2 cut(s)	782, 1670
TspMI	CCCGGG	1 cut(s)	1747
TspRI	CASTG	4 cut(s)	519, 571, 1038, 1273
VpaK11BI	GGWCC	1 cut(s)	842
XagI	CCTNNNNNAGG	2 cut(s)	9, 331
XapI	RAATTY	3 cut(s)	110, 460, 1122
XceI	RCATGY	2 cut(s)	1045, 1261
XcmI	CCANNNNNNNNNTGG	1 cut(s)	917
XhoI	CTCGAG	2 cut(s)	320, 1014
XmaI	CCCGGG	1 cut(s)	1747
XmiI	GTMKAC	1 cut(s)	596
XspI	CTAG	6 cut(s)	308, 471, 926, 1863, 2001, 2008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.