Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008423.1

Orthogroup ID

OG0009556

Physical Location & Seq

Genomic Coordinates Reverse (-)

2670 .. 8372

Gene Structure 5703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008423.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

atgaaagcaacgcgcctgccgcttttgtcgccgctagaagacaagaaactgactttcactccccccccacggcgcgtctccccgagctgcttcgttttggatctggctggcatcctgggtcacgggctcagtcagcctcctacccgagttcgtgacctgggcctcccactgtggttttgccccaacaccggtggaatcatgaataggatcaaaatgggtcaccagctgctgcttttgacgtggtgcccgggcaataggatgctcgggcttaaccgggccatacccgacccgccaaaatcctcaactgcaaggaccagctttatagactcgacccagacccagacccagacccagactcagccgaaacctctcagacccgacgccatggctcccaagctcaaagacaagcagcagaagcctcctccgccgcccatggaggatctcttcgccgctctcaacggccacatcgagcaactggagttcgagaaagcggtcaaagtcgcagatcaagttctgtcgattgctcctggagacgaggacgcgattaagtgcaaggtcgttggcttgatcaaggacgataagaccaaagaggcgctttccgtgattcgatcttgcaagaatcctgctctggatttcagcttcttcaaggcatactgcttatacagagaaaacgagttagatgaagctcttaaatccctgaaaagccaagagacaactcctgcagcaatgctattagaagcccagatcttatttcgcttgggaaagtttgatgcttgtagcgacatatatcagaagcttcaaaagtccaaagttgacttattagatacaaattatgtagctagcttggttgctgctgggagggcttctgaagtacaagttgaagcactcaggggtaaagcaaagagtagttttgagcttgcattcaacactgcctgttctttgattgaaagcaataagtacactgatgcagagcagttcctgttgctagccagaacaaccggccgtgaagcattgctggaagatggtgcacccgaggatgagatagaaactgaattggcgccaatagctgtccagttggcctatgttcagcagctccttgggcacagacaagaggcccttgaggcctacacgcacatcattaaatcggatgtgggagatgagttatcacttgcagtggcagtcaacaacctaatagctttgagaagtccaaaagatgtttctgatggcctaaagaaacttgatcgattaaaacagaaggacgacaagcaaagcttccaccttactgctaaactggactcgaagctttcaccaaaacaaaaagaatcaatatatgtgactcgggtcctcttacttctccatgcaaataagatggatcaggctcgagaacttgttgctgcacttccagacatgtttcccgagagtgtgatgcctgttctacttcaggccgcactttttgtaagagaaaacaaggctggaaaagctgaagaagttttagcccagttttccgagaagttccctgaaaagtccaaggtttttctcttagcaagggcacaggttgctgctgctgccagccaccctcatattgccgcggagtccctttctaagatacctgatatccagcacatgcctgctactgttgctactcttgtgtctcttaaagagcgtgctggtgacattgatggcgccgctgctgtgcttgacgctgcaataaactggtggtcaaattccatgaccgaggacaacaagctcaatgttttgatgcaagaggctgcttccttcaagctgaggcatggacgagaagaggaagcttctcgtctatatgaggagcttgtgaaaagccatggaagtgtggaagcattggttgggcttgtaactacagttgctcgagtggatgttaagaaggcagaagcttatgagcagaagctgaaaccattaccaggtttgaaggggatcaatgtggataatctagagaagacttctggtgccaaacatgaagagggtatttctcaagttaaggtcgccgagacatatgaggggaagagcaagtcaaaggcaaagaaaaagagaaagagaaagccaagatatcctaaagggtttgaccctgcgaaccccgggcccccaccggatccagaaaggtggcttcccaagagagaaagatcaagttataggcctaagagaaaggataagagagcagctgctcaagtacgaggctctcagggttctgtagctagagacaaacatgaagctggtgccacttccagcaatgcaaaatcaaaccaagcagccacttcaaaaggagcctcacagaattcagttgcagagccatcgaagacttcatccaagtcaagaaaaaagtccaggaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005047 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005786 GO:0005829 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006616 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008312 GO:0012505 GO:0015031 GO:0015833 GO:0019904 GO:0030911 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042493 GO:0042886 GO:0043021 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0045047 GO:0045184 GO:0046907 GO:0048500 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0070972 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

SRP72 SRP_TPR_like

Protein Analysis

788

Amino Acids

86.68

Weight (kDa)

9.31

Isoelectric Point (pI)

39.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009556)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67650 AT1G67680
fragaria_vesca	FvH4_4g24580 FvH4_4g24580 FvH4_4g24580
malus_domestica	MD13G1110100.v1.1 MD16G1110000.v1.1
prunus_persica	Prupe.1G234800_v2.0.a1 Prupe.1G234800_v2.0.a1
pyrus_communis	pycom13g09580 pycom16g09350
rosa_chinensis	RchiOBHm_Chr4g0431561 RchiOBHm_Chr4g0431581
rosa_laevigata	RLG00000006906
rosa_multiflora	Rmu_sc0008423.1_g000002
rosa_roxburghii	Rroxscaffold_5G00373040
rosa_rugosa	Rorug04G0251000
rosa_samantha	Rh4AG307700 Rh4BG315300 Rh4CG330800 Rh4DG310200
rosa_wichuraiana	Rw4G026670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	5 cut(s)	243, 1057, 1682, 1982, 2249
AccBSI	CCGCTC	1 cut(s)	452
AccII	CGCG	4 cut(s)	13, 75, 542, 1589
AclWI	GGATC	7 cut(s)	108, 215, 447, 1380, 1958, 2120, 2133
AcoI	YGGCCR	2 cut(s)	460, 1000
AcsI	RAATTY	2 cut(s)	1723, 2308
AcuI	CTGAAG	3 cut(s)	888, 1424, 1503
AcyI	GRCGYC	3 cut(s)	381, 1058, 1683
AfaI	GTAC	3 cut(s)	873, 959, 2205
AfiI	CCNNNNNNNGG	3 cut(s)	69, 188, 1937
AflIII	ACRYGT	1 cut(s)	1407
AgeI	ACCGGT	1 cut(s)	188
AgsI	TTSAA	8 cut(s)	646, 800, 881, 925, 947, 1780, 1945, 2292
AjiI	CACGTC	1 cut(s)	240
AjnI	CCWGG	5 cut(s)	114, 156, 526, 1936, 2357
AjuI	GAANNNNNNNTTGG	4 cut(s)	1201, 1233, 1845, 1877
Alw21I	GWGCWC	1 cut(s)	1030
Alw26I	GTCTC	6 cut(s)	82, 525, 704, 1656, 2018, 2226
Alw44I	GTGCAC	1 cut(s)	1026
AlwI	GGATC	7 cut(s)	108, 215, 447, 1380, 1958, 2120, 2133
AlwNI	CAGNNNCTG	3 cut(s)	229, 979, 1924
ApaI	GGGCCC	1 cut(s)	2118
ApaLI	GTGCAC	1 cut(s)	1026
ApoI	RAATTY	2 cut(s)	1723, 2308
AsiGI	ACCGGT	1 cut(s)	188
AspLEI	GCGC	5 cut(s)	15, 75, 595, 1060, 1685
AspS9I	GGNCC	7 cut(s)	160, 276, 312, 1114, 1342, 2114, 2115
AsuC2I	CCSGG	5 cut(s)	248, 249, 275, 2112, 2113
AsuHPI	GGTGA	3 cut(s)	212, 1299, 1682
AsuNHI	GCTAGC	2 cut(s)	839, 985
AvaII	GGWCC	2 cut(s)	312, 1342
BaeGI	GKGCMC	5 cut(s)	248, 1030, 1104, 1552, 2118
BamHI	GGATCC	1 cut(s)	2125
BanI	GGYRCC	5 cut(s)	243, 1057, 1682, 1982, 2249
BanII	GRGCYC	2 cut(s)	129, 2118
BbsI	GAAGAC	3 cut(s)	45, 1979, 2336
Bbv12I	GWGCWC	1 cut(s)	1030
BbvCI	CCTCAGC	1 cut(s)	1784
BccI	CCATC	5 cut(s)	1016, 1217, 1363, 1673, 2332
BceAI	ACGGC	3 cut(s)	86, 475, 987
BcgI	CGANNNNNNTGC	2 cut(s)	2307, 2341
BciT130I	CCWGG	5 cut(s)	116, 158, 528, 1938, 2359
BclI	TGATCA	1 cut(s)	567
BcnI	CCSGG	5 cut(s)	248, 249, 275, 2112, 2113
BcoDI	GTCTC	6 cut(s)	82, 525, 704, 1656, 2018, 2226
BfaI	CTAG	6 cut(s)	35, 840, 986, 1967, 2229, 2365
BfmI	CTRYAG	3 cut(s)	720, 1875, 2223
BfoI	RGCGCY	3 cut(s)	596, 1061, 1686
BglI	GCCNNNNNGGC	1 cut(s)	1121
BglII	AGATCT	1 cut(s)	744
Bme18I	GGWCC	2 cut(s)	312, 1342
BmgBI	CACGTC	1 cut(s)	240
BmgT120I	GGNCC	7 cut(s)	160, 276, 312, 1114, 1342, 2114, 2115
BmrI	ACTGGG	1 cut(s)	1492
BmsI	GCATC	6 cut(s)	120, 249, 760, 955, 1416, 1749
BmtI	GCTAGC	2 cut(s)	843, 989
BmuI	ACTGGG	1 cut(s)	1492
BoxI	GACNNNNGTC	1 cut(s)	1340
BpiI	GAAGAC	3 cut(s)	45, 1979, 2336
BpmI	CTGGAG	2 cut(s)	497, 549
Bpu10I	CCTNAGC	1 cut(s)	1784
BpuEI	CTTGAG	3 cut(s)	1139, 1992, 2184
BpuMI	CCSGG	5 cut(s)	248, 249, 275, 2112, 2113
Bsa29I	ATCGAT	1 cut(s)	1243
BsaHI	GRCGYC	3 cut(s)	381, 1058, 1683
BsaWI	WCCGGW	2 cut(s)	188, 2122
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	3 cut(s)	69, 188, 1937
Bse118I	RCCGGY	2 cut(s)	188, 998
Bse1I	ACTGG	5 cut(s)	480, 1072, 1296, 1498, 1718
Bse3DI	GCAATG	3 cut(s)	732, 1010, 2269
BseBI	CCWGG	5 cut(s)	116, 158, 528, 1938, 2359
BseCI	ATCGAT	1 cut(s)	1243
BseGI	GGATG	6 cut(s)	111, 264, 1042, 1153, 1897, 2336
BseLI	CCNNNNNNNGG	3 cut(s)	69, 188, 1937
BseMI	GCAATG	3 cut(s)	732, 1010, 2269
BseMII	CTCAG	6 cut(s)	142, 371, 385, 901, 1775, 2228
BseNI	ACTGG	5 cut(s)	480, 1072, 1296, 1498, 1718
BseRI	GAGGAG	2 cut(s)	411, 1838
BseSI	GKGCMC	5 cut(s)	248, 1030, 1104, 1552, 2118
BseX3I	CGGCCG	1 cut(s)	1000
BseYI	CCCAGC	1 cut(s)	854
BsgI	GTGCAG	1 cut(s)	1380
Bsh1236I	CGCG	4 cut(s)	13, 75, 542, 1589
Bsh1285I	CGRYCG	1 cut(s)	1003
BshNI	GGYRCC	5 cut(s)	243, 1057, 1682, 1982, 2249
BshTI	ACCGGT	1 cut(s)	188
BshVI	ATCGAT	1 cut(s)	1243
BsiEI	CGRYCG	1 cut(s)	1003
BsiHKAI	GWGCWC	1 cut(s)	1030
BsiSI	CCGG	6 cut(s)	189, 248, 274, 999, 2112, 2123
BslFI	GGGAC	1 cut(s)	1579
BslI	CCNNNNNNNGG	3 cut(s)	69, 188, 1937
BsmAI	GTCTC	6 cut(s)	82, 525, 704, 1656, 2018, 2226
BsmBI	CGTCTC	2 cut(s)	82, 525
BsmFI	GGGAC	1 cut(s)	1579
BsmI	GAATGC	1 cut(s)	920
Bsp120I	GGGCCC	1 cut(s)	2114
Bsp1286I	GDGCHC	6 cut(s)	129, 248, 1030, 1104, 1552, 2118
Bsp19I	CCATGG	3 cut(s)	384, 432, 1840
BspCNI	CTCAG	6 cut(s)	141, 370, 384, 900, 1776, 2227
BspDI	ATCGAT	1 cut(s)	1243
BspFNI	CGCG	4 cut(s)	13, 75, 542, 1589
BspHI	TCATGA	1 cut(s)	198
BspMAI	CTGCAG	1 cut(s)	724
BspOI	GCTAGC	2 cut(s)	843, 989
BspPI	GGATC	7 cut(s)	108, 215, 447, 1380, 1958, 2120, 2133
BspQI	GCTCTTC	1 cut(s)	2033
BspT107I	GGYRCC	5 cut(s)	243, 1057, 1682, 1982, 2249
BsrBI	CCGCTC	1 cut(s)	452
BsrDI	GCAATG	3 cut(s)	732, 1010, 2269
BsrFI	RCCGGY	2 cut(s)	188, 998
BsrI	ACTGG	5 cut(s)	480, 1072, 1296, 1498, 1718
BssAI	RCCGGY	2 cut(s)	188, 998
BssNI	GRCGYC	3 cut(s)	381, 1058, 1683
BssT1I	CCWWGG	5 cut(s)	384, 432, 1096, 1527, 1840
Bst2UI	CCWGG	5 cut(s)	116, 158, 528, 1938, 2359
Bst4CI	ACNGT	3 cut(s)	171, 1636, 1879
Bst6I	CTCTTC	4 cut(s)	449, 1794, 1989, 2033
BstACI	GRCGYC	3 cut(s)	381, 1058, 1683
BstAPI	GCANNNNNTGC	1 cut(s)	1556
BstC8I	GCNNGC	8 cut(s)	17, 109, 841, 918, 987, 1570, 1629, 1665
BstDEI	CTNAG	9 cut(s)	128, 357, 371, 887, 1540, 1602, 1784, 2172, 2214
BstDSI	CCRYGG	5 cut(s)	68, 384, 432, 1587, 1840
BstEII	GGTNACC	1 cut(s)	218
BstF5I	GGATG	6 cut(s)	111, 264, 1042, 1153, 1897, 2336
BstFNI	CGCG	4 cut(s)	13, 75, 542, 1589
BstH2I	RGCGCY	3 cut(s)	596, 1061, 1686
BstHHI	GCGC	5 cut(s)	15, 75, 595, 1060, 1685
BstMAI	GTCTC	6 cut(s)	82, 525, 704, 1656, 2018, 2226
BstMCI	CGRYCG	1 cut(s)	1003
BstNI	CCWGG	5 cut(s)	116, 158, 528, 1938, 2359
BstNSI	RCATGY	2 cut(s)	1411, 1627
BstPAI	GACNNNNGTC	1 cut(s)	1340
BstPI	GGTNACC	1 cut(s)	218
BstSFI	CTRYAG	3 cut(s)	720, 1875, 2223
BstSLI	GKGCMC	5 cut(s)	248, 1030, 1104, 1552, 2118
BstUI	CGCG	4 cut(s)	13, 75, 542, 1589
BstV2I	GAAGAC	3 cut(s)	45, 1979, 2336
BstX2I	RGATCY	4 cut(s)	100, 439, 744, 2125
BstXI	CCANNNNNNTGG	1 cut(s)	2136
BstYI	RGATCY	4 cut(s)	100, 439, 744, 2125
BstZI	CGGCCG	1 cut(s)	1000
Bsu15I	ATCGAT	1 cut(s)	1243
BsuTUI	ATCGAT	1 cut(s)	1243
BtgI	CCRYGG	5 cut(s)	68, 384, 432, 1587, 1840
BtrI	CACGTC	1 cut(s)	240
BtsCI	GGATG	6 cut(s)	111, 264, 1042, 1153, 1897, 2336
BtsI	GCAGTG	2 cut(s)	927, 1179
BtsIMutI	CAGTG	4 cut(s)	167, 927, 960, 1179
Cac8I	GCNNGC	8 cut(s)	17, 109, 841, 918, 987, 1570, 1629, 1665
CaiI	CAGNNNCTG	3 cut(s)	229, 979, 1924
CciI	TCATGA	1 cut(s)	198
CfoI	GCGC	5 cut(s)	15, 75, 595, 1060, 1685
Cfr10I	RCCGGY	2 cut(s)	188, 998
Cfr13I	GGNCC	7 cut(s)	160, 276, 312, 1114, 1342, 2114, 2115
Cfr42I	CCGCGG	1 cut(s)	1590
Cfr9I	CCCGGG	2 cut(s)	247, 2111
ClaI	ATCGAT	1 cut(s)	1243
CseI	GACGC	4 cut(s)	64, 389, 548, 1709
CsiI	ACCWGGT	1 cut(s)	1936
Csp6I	GTAC	3 cut(s)	872, 958, 2204
CspAI	ACCGGT	1 cut(s)	188
CspCI	CAANNNNNGTGG	2 cut(s)	172, 207
CviQI	GTAC	3 cut(s)	872, 958, 2204
DdeI	CTNAG	9 cut(s)	128, 357, 371, 887, 1540, 1602, 1784, 2172, 2214
DinI	GGCGCC	2 cut(s)	1059, 1684
EaeI	YGGCCR	2 cut(s)	460, 1000
EagI	CGGCCG	1 cut(s)	1000
Eam1104I	CTCTTC	4 cut(s)	449, 1794, 1989, 2033
EarI	CTCTTC	4 cut(s)	449, 1794, 1989, 2033
EciI	GGCGGA	1 cut(s)	414
EclXI	CGGCCG	1 cut(s)	1000
Eco130I	CCWWGG	5 cut(s)	384, 432, 1096, 1527, 1840
Eco147I	AGGCCT	2 cut(s)	1124, 2170
Eco24I	GRGCYC	2 cut(s)	129, 2118
Eco32I	GATATC	2 cut(s)	1615, 2084
Eco47I	GGWCC	2 cut(s)	312, 1342
Eco52I	CGGCCG	1 cut(s)	1000
Eco57I	CTGAAG	3 cut(s)	888, 1424, 1503
Eco91I	GGTNACC	1 cut(s)	218
EcoO109I	RGGNCCY	3 cut(s)	1114, 1342, 2115
EcoO65I	GGTNACC	1 cut(s)	218
EcoRI	GAATTC	1 cut(s)	2308
EcoRII	CCWGG	5 cut(s)	114, 156, 526, 1936, 2357
EcoRV	GATATC	2 cut(s)	1615, 2084
EcoT14I	CCWWGG	5 cut(s)	384, 432, 1096, 1527, 1840
EcoT38I	GRGCYC	2 cut(s)	129, 2118
EgeI	GGCGCC	2 cut(s)	1059, 1684
EheI	GGCGCC	2 cut(s)	1059, 1684
ErhI	CCWWGG	5 cut(s)	384, 432, 1096, 1527, 1840
Esp3I	CGTCTC	2 cut(s)	82, 525
FalI	AAGNNNNNCTT	6 cut(s)	579, 611, 1101, 1133, 1256, 1288
FaqI	GGGAC	1 cut(s)	1579
FauI	CCCGC	1 cut(s)	297
FauNDI	CATATG	1 cut(s)	2029
FbaI	TGATCA	1 cut(s)	567
FokI	GGATG	6 cut(s)	98, 271, 1049, 1160, 1904, 2323
FriOI	GRGCYC	2 cut(s)	129, 2118
FspBI	CTAG	6 cut(s)	35, 840, 986, 1967, 2229, 2365
GlaI	GCGC	5 cut(s)	14, 74, 594, 1059, 1684
GsaI	CCCAGC	1 cut(s)	858
GsuI	CTGGAG	2 cut(s)	497, 549
HaeII	RGCGCY	3 cut(s)	596, 1061, 1686
HapII	CCGG	6 cut(s)	189, 248, 274, 999, 2112, 2123
HgaI	GACGC	4 cut(s)	64, 389, 548, 1709
HhaI	GCGC	5 cut(s)	15, 75, 595, 1060, 1685
Hin1I	GRCGYC	3 cut(s)	381, 1058, 1683
Hin6I	GCGC	5 cut(s)	13, 73, 593, 1058, 1683
HinP1I	GCGC	5 cut(s)	13, 73, 593, 1058, 1683
HincII	GTYRAC	2 cut(s)	814, 1183
HindII	GTYRAC	2 cut(s)	814, 1183
HindIII	AAGCTT	5 cut(s)	794, 1270, 1301, 1806, 1908
HinfI	GANTC	9 cut(s)	195, 326, 355, 604, 619, 1295, 1322, 1336, 1592
HpaII	CCGG	6 cut(s)	189, 248, 274, 999, 2112, 2123
HphI	GGTGA	3 cut(s)	212, 1299, 1682
Hpy166II	GTNNAC	4 cut(s)	814, 960, 1028, 1183
Hpy188I	TCNGA	6 cut(s)	374, 792, 868, 1147, 1222, 1507
Hpy8I	GTNNAC	4 cut(s)	814, 960, 1028, 1183
Hpy99I	CGWCG	1 cut(s)	383
HpyAV	CCTTC	4 cut(s)	1249, 1786, 1894, 1939
HpyCH4III	ACNGT	3 cut(s)	171, 1636, 1879
HpyCH4IV	ACGT	1 cut(s)	239
HpyF3I	CTNAG	9 cut(s)	128, 357, 371, 887, 1540, 1602, 1784, 2172, 2214
HpySE526I	ACGT	1 cut(s)	239
Hsp92I	GRCGYC	3 cut(s)	381, 1058, 1683
HspAI	GCGC	5 cut(s)	13, 73, 593, 1058, 1683
KasI	GGCGCC	2 cut(s)	1057, 1682
Ksp22I	TGATCA	1 cut(s)	567
KspI	CCGCGG	1 cut(s)	1590
LguI	GCTCTTC	1 cut(s)	2033
LmnI	GCTCC	5 cut(s)	394, 529, 1098, 1825, 2297
LweI	GCATC	6 cut(s)	120, 249, 760, 955, 1416, 1749
MabI	ACCWGGT	1 cut(s)	1936
MaeI	CTAG	6 cut(s)	35, 840, 986, 1967, 2229, 2365
MaeII	ACGT	1 cut(s)	239
MaeIII	GTNAC	6 cut(s)	119, 152, 218, 1333, 1670, 1870
MbiI	CCGCTC	1 cut(s)	452
MflI	RGATCY	4 cut(s)	100, 439, 744, 2125
MhlI	GDGCHC	6 cut(s)	129, 248, 1030, 1104, 1552, 2118
MluCI	AATT	4 cut(s)	829, 1052, 1723, 2308
Mly113I	GGCGCC	2 cut(s)	1058, 1683
MlyI	GAGTC	5 cut(s)	320, 349, 1289, 1330, 1601
MseI	TTAA	8 cut(s)	270, 546, 690, 1140, 1247, 1656, 1896, 2013
MslI	CAYNNNNRTG	1 cut(s)	1845
MspA1I	CMGCKG	4 cut(s)	226, 1589, 1688, 2195
MspI	CCGG	6 cut(s)	189, 248, 274, 999, 2112, 2123
Mva1269I	GAATGC	1 cut(s)	920
MvaI	CCWGG	5 cut(s)	116, 158, 528, 1938, 2359
MvnI	CGCG	4 cut(s)	13, 75, 542, 1589
NarI	GGCGCC	2 cut(s)	1058, 1683
NciI	CCSGG	5 cut(s)	248, 249, 275, 2112, 2113
NcoI	CCATGG	3 cut(s)	384, 432, 1840
NdeI	CATATG	1 cut(s)	2029
NheI	GCTAGC	2 cut(s)	839, 985
NmeAIII	GCCGAG	1 cut(s)	2047
NmuCI	GTSAC	5 cut(s)	119, 152, 218, 1333, 1670
NspI	RCATGY	2 cut(s)	1411, 1627
PaeR7I	CTCGAG	2 cut(s)	1380, 1884
PagI	TCATGA	1 cut(s)	198
PceI	AGGCCT	2 cut(s)	1124, 2170
PciI	ACATGT	1 cut(s)	1407
PciSI	GCTCTTC	1 cut(s)	2033
PcsI	WCGNNNNNNNCGW	1 cut(s)	465
PctI	GAATGC	1 cut(s)	920
PfeI	GAWTC	4 cut(s)	195, 604, 619, 1322
PfoI	TCCNGGA	2 cut(s)	526, 2357
PinAI	ACCGGT	1 cut(s)	188
PleI	GAGTC	5 cut(s)	320, 349, 1289, 1330, 1600
PluTI	GGCGCC	2 cut(s)	1061, 1686
PpsI	GAGTC	5 cut(s)	320, 349, 1289, 1330, 1600
PpuMI	RGGWCCY	1 cut(s)	1342
PscI	ACATGT	1 cut(s)	1407
PshAI	GACNNNNGTC	1 cut(s)	1340
Psp5II	RGGWCCY	1 cut(s)	1342
Psp6I	CCWGG	5 cut(s)	114, 156, 526, 1936, 2357
PspEI	GGTNACC	1 cut(s)	218
PspFI	CCCAGC	1 cut(s)	854
PspGI	CCWGG	5 cut(s)	114, 156, 526, 1936, 2357
PspOMI	GGGCCC	1 cut(s)	2114
PspPI	GGNCC	7 cut(s)	160, 276, 312, 1114, 1342, 2114, 2115
PspPPI	RGGWCCY	1 cut(s)	1342
PspXI	VCTCGAGB	1 cut(s)	1884
PstI	CTGCAG	1 cut(s)	724
PstNI	CAGNNNCTG	3 cut(s)	229, 979, 1924
PsuI	RGATCY	4 cut(s)	100, 439, 744, 2125
PvuII	CAGCTG	2 cut(s)	226, 2195
RsaI	GTAC	3 cut(s)	873, 959, 2205
RsaNI	GTAC	3 cut(s)	872, 958, 2204
RseI	CAYNNNNRTG	1 cut(s)	1845
SacII	CCGCGG	1 cut(s)	1590
SapI	GCTCTTC	1 cut(s)	2033
SaqAI	TTAA	8 cut(s)	270, 546, 690, 1140, 1247, 1656, 1896, 2013
Sau96I	GGNCC	7 cut(s)	160, 276, 312, 1114, 1342, 2114, 2115
SchI	GAGTC	5 cut(s)	320, 349, 1289, 1330, 1601
SduI	GDGCHC	6 cut(s)	129, 248, 1030, 1104, 1552, 2118
SexAI	ACCWGGT	1 cut(s)	1936
SfaNI	GCATC	6 cut(s)	120, 249, 760, 955, 1416, 1749
SfcI	CTRYAG	3 cut(s)	720, 1875, 2223
SfiI	GGCCNNNNNGGCC	1 cut(s)	1121
SfoI	GGCGCC	2 cut(s)	1059, 1684
Sfr274I	CTCGAG	2 cut(s)	1380, 1884
Sfr303I	CCGCGG	1 cut(s)	1590
SgrAI	CRCCGGYG	1 cut(s)	188
SgrBI	CCGCGG	1 cut(s)	1590
SinI	GGWCC	2 cut(s)	312, 1342
SlaI	CTCGAG	2 cut(s)	1380, 1884
SmaI	CCCGGG	2 cut(s)	249, 2113
SmiMI	CAYNNNNRTG	1 cut(s)	1845
SmlI	CTYRAG	5 cut(s)	1118, 1380, 1884, 2007, 2199
SmoI	CTYRAG	5 cut(s)	1118, 1380, 1884, 2007, 2199
SrfI	GCCCGGGC	1 cut(s)	249
Sse9I	AATT	4 cut(s)	829, 1052, 1723, 2308
SseBI	AGGCCT	2 cut(s)	1124, 2170
SspDI	GGCGCC	2 cut(s)	1057, 1682
SspMI	CTAG	6 cut(s)	35, 840, 986, 1967, 2229, 2365
StuI	AGGCCT	2 cut(s)	1124, 2170
StyI	CCWWGG	5 cut(s)	384, 432, 1096, 1527, 1840
TaaI	ACNGT	3 cut(s)	171, 1636, 1879
TaiI	ACGT	1 cut(s)	242
TaqII	GACCGA	1 cut(s)	1748
TasI	AATT	4 cut(s)	829, 1052, 1723, 2308
TatI	WGTACW	2 cut(s)	871, 957
TauI	GCSGC	7 cut(s)	22, 34, 430, 452, 1448, 1589, 1688
TfiI	GAWTC	4 cut(s)	195, 604, 619, 1322
Tru1I	TTAA	8 cut(s)	270, 546, 690, 1140, 1247, 1656, 1896, 2013
Tru9I	TTAA	8 cut(s)	270, 546, 690, 1140, 1247, 1656, 1896, 2013
TscAI	CASTG	4 cut(s)	174, 934, 967, 1179
TseFI	GTSAC	5 cut(s)	119, 152, 218, 1333, 1670
Tsp45I	GTSAC	5 cut(s)	119, 152, 218, 1333, 1670
TspDTI	ATGAA	6 cut(s)	17, 215, 696, 2007, 2256, 2325
TspGWI	ACGGA	1 cut(s)	589
TspMI	CCCGGG	2 cut(s)	247, 2111
TspRI	CASTG	4 cut(s)	174, 934, 967, 1179
VneI	GTGCAC	1 cut(s)	1026
VpaK11BI	GGWCC	2 cut(s)	312, 1342
XapI	RAATTY	2 cut(s)	1723, 2308
XbaI	TCTAGA	1 cut(s)	1966
XceI	RCATGY	2 cut(s)	1411, 1627
XhoI	CTCGAG	2 cut(s)	1380, 1884
XmaI	CCCGGG	2 cut(s)	247, 2111
XspI	CTAG	6 cut(s)	35, 840, 986, 1967, 2229, 2365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.