Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0013007

Physical Location & Seq

Genomic Coordinates Reverse (-)

8265113 .. 8269769

Gene Structure 4657 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1114000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGTATGCGGTGAAACAATCCACCACTGCTTCTCTCAAGTCAGCCGCCGCCGTTGGCCGGCGGGTCACCGGGCCCGGGAACTACATCAGGGTCCGGAAGGCCCACGTTCCCGGATCACGGGTCAATGGGCAGGGATCAGTCAGGGCCGCGATCAGCGGCGGAGACAAGGTGACTGTGACGGCTGCAACGCCATTGCAGAGTAAAGGCGTTGATAAGTTGTCTTCTTCCGGAGGTGGAGAGATCCAGGTGAAGGCGGTGGTGACGATCAGGAAGAAGATGAAGGAGAAGATCACGGAGAAGATTGAGGATCAGTGGGAGTTCTTCATCAATGGGATTGGACAGGGAATTCTCATTCAGCTGGTCAGCGAGCAAGTTGATCCTGTTACAAATTCAGGAAAGATCGTCCAGTCTGCCGTGAGAGGGTGGCTGCCAAAGCCGGTGCCTTCGGAGTACGCACACATTGTTGAATATGCTGCTGACTTCACTGTCCCATCCGACTTTGGCTGTCCTGGGGCAATTATGGTTACCAATCTTCAGGGCAAAGAGTTCTACTTGTTGGAGATTGTCATTCATGGTTTCGACGGAGGCCCCATTTTCTTCCCTGCCAACACTTGGATCCATTCACGCAAAGATAATCTGGAAAGTAGAATTATCTTCAAAAATCAAGCATGTCTGCCTGGACAGACACCACCGGGCCTTAAAGATCTTCGACGTGAAGACTTACTCAGCATTCGGGGTGATGGGAAAGGTAGGAGAAAGGAACATGATAGAATCTATGATTATGATGTTTACAATGATTTGGGAAATCCTGATAAGAGTAAAGATCTGGCTAGGCCGGTCATTGGTGGCGAGGAGAGGCCTTACCCTAGGCGTTGTAGGACCGGCCGGCCTCCAACCAAGACAGATCCTCTAACGGAGAGCAGAATTGAAAAGCCCCATCCAGTTTATGTACCTCGGGATGAGGCTTTCGAGGAAATTAAGCAGAATACTTTCTCCACTGGAAGATTGAAAGCTCTGCTTCACAATCTTATACCATCTCTTGCTGCTACATTGTCAAGTACAGACAATCCTTTCGAGTGCTTCTCTGATATAGATGACCTATATAGTGACGGTGTCCTCATGAGAGAGAAAGACGAGGAGAAGAAAGAAGGCAAGAAACTGTTTCTGGGCAGCATGGTGAAAGAGGTTCTTTCCGTTGGAGAAAGATGGTTGAAATACGAAATCCCCGCTGTTATAAAAATGGATAGATTTGCTTGGTTGCGTGATAATGAATTTGCACGCCAAACTTTAGCTGGGGTCAATCCAGTCAACATTGAGATTTTGAAGGAATTTCCGATTCTCAGCAAACTAGATCCTGCTGTTTACGGTCCTCCTGAATCTGCTATCACAAGGGAATTGTTAGAGCAAGAAATCAATGGGATGAGTGTAGATAAGGCAATTGAGGAGAAGAGACTATTTATACTTGATCACCATGACACGTATATGCCATTTATTGAGAGGATGAACGCCTTGCCTGGGAGAAAAGCTTATGCCTCTAGGACGGTGTTCTTCTATACCCCTGCTGGTATTGTGAGGCCTATAGCTATTGAGCTTTCACTTCCACCAACGGCTTTATCCCCGCAAAATAAACGTGTTTATACTCATGGGCATCATGCTACTACACATTGGATTTGGAAGCTAGCCAAAGCTCATGTTTGCTCAAACGATGCCGGCATCCATCAACTAGTCAATCACTGGTTGAGGACTCATGCTTCCGTTGAACCTTATATAATTGCGACTCATAGACAGCTTAGCTCAATGCACCCGATTTACAAGCTACTCCACCCACACATGCGCTACACTTTGGAAATTAACGCACTTGCACGACAAAGCTTAATAAATGGAGGGGGAATAATTGAGGCTTCTTTTAGTCCTGGAAAGTACGCCATGGATGTAAGCTCTGCAGCATACAAGGATATGTGGAGGTTTGACATGGAGGCATTACCAGCTGATCTTCTTCGAAGAGGCATGGCTGTGGAAGATCCTTCGGCTCCTTGTGGCGTGAAACTTGTAATTGAGGACTATCCTTACGCTGCAGATGGTCTCCTCGTATGGTCTGCTATAAAAGAATGGGTAGAATCCTATGTGGAACACTACTACTCTGAGCCAAATTCTGTCACATCTGACATTGAGCTCCAAGAGTGGTGGAGTGAGATCAAGAATAAGGGACACGAAGACAAGCGAAACGAGCCCTGGTGGCCTAAACTCAATACCAAAGAGGACTTATCCGGTGTACTAACAACGATAATTTGGGTCGCTTCAGGTCAACACGCAGCCATCAACTTTGGCCAGTACCCTTTTGGTGGTTATGTACCAAACCGCCCGGCCATTATGAGAAAACTCATTCCGCAAGAAGACGACCCTGATTACGAAATGTTTATTTCTAACCCGCAGCAAACTTTCCTTTCTTCCTTGGCAACGAAGCTTCAAGCCACCAAGATAATGGCCGTACAAGATACACTCTCAACTCACTCTCCTGATGAAGAGTACTTGGGTCAGGTGAACCCTCTGGAATCCCATTGGATCAACGATAATGAAGTTATGAAGATGTTCAATAGATTCTCTGATAGACTGAAGGAGATAGAACATACCATTAACCTACGAAACAAAGATAGCCGTCTTAAAAACAGAAGTGGAGCTGGCATTCCGCCATACGAATTGCTGCTTCCCACCTCAGGCCCTGGAGTTACTGGCCGCGGAATCCCCAACAGCATCTCTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006629 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0030258 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

921

Amino Acids

103.38

Weight (kDa)

6.99

Isoelectric Point (pI)

48.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipoxygenase	PF00305	232 - 903	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67560
fragaria_vesca	FvH4_4g24180 FvH4_4g24180
malus_domestica	MD13G1114000.v1.1 MD16G1113200.v1.1
prunus_persica	Prupe.1G232400_v2.0.a1
pyrus_communis	pycom13g09920 pycom16g09610
rosa_chinensis	RchiOBHm_Chr4g0430941
rosa_laevigata	RLG00000006936
rosa_multiflora	Rmu_sc0006263.1_g000014
rosa_roxburghii	Rroxscaffold_5G00372630
rosa_rugosa	Rorug04G0247400
rosa_samantha	Rh4AG304000 Rh4BG311300 Rh4CG327600 Rh4DG307400
rosa_wichuraiana	Rw4G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1235
AasI	GACNNNNNNGTC	1 cut(s)	485
AccB1I	GGYRCC	1 cut(s)	439
AccB7I	CCANNNNNTGG	1 cut(s)	612
AccII	CGCG	2 cut(s)	149, 2736
AccIII	TCCGGA	2 cut(s)	93, 227
AcoI	YGGCCR	6 cut(s)	55, 883, 2326, 2364, 2484, 2731
AcsI	RAATTY	5 cut(s)	345, 388, 1271, 1328, 2149
AcuI	CTGAAG	3 cut(s)	518, 2283, 2633
AfaI	GTAC	9 cut(s)	452, 951, 1060, 1922, 2274, 2333, 2352, 2490, 2528
AflIII	ACRYGT	2 cut(s)	1476, 1630
AgsI	TTSAA	9 cut(s)	467, 658, 929, 1009, 1213, 1324, 1760, 2468, 2593
AhlI	ACTAGT	1 cut(s)	1723
AjiI	CACGTC	1 cut(s)	713
AjnI	CCWGG	7 cut(s)	243, 508, 676, 1513, 1912, 2231, 2719
Alw21I	GWGCWC	1 cut(s)	2175
Alw26I	GTCTC	3 cut(s)	156, 1444, 2087
AlwNI	CAGNNNCTG	1 cut(s)	2720
Ama87I	CYCGRG	2 cut(s)	74, 954
Aor13HI	TCCGGA	2 cut(s)	93, 227
ApaI	GGGCCC	1 cut(s)	75
ApoI	RAATTY	5 cut(s)	345, 388, 1271, 1328, 2149
ArsI	GACNNNNNNTTYG	2 cut(s)	1055, 1087
Asp700I	GAANNNNTTC	2 cut(s)	989, 2588
AspA2I	CCTAGG	1 cut(s)	866
AspLEI	GCGC	1 cut(s)	1836
AsuC2I	CCSGG	6 cut(s)	70, 75, 76, 111, 693, 2363
AsuHPI	GGTGA	9 cut(s)	22, 58, 181, 259, 271, 749, 1189, 1460, 2551
AsuII	TTCGAA	1 cut(s)	1999
AsuNHI	GCTAGC	1 cut(s)	1678
AvaI	CYCGRG	2 cut(s)	74, 954
AvaII	GGWCC	3 cut(s)	91, 879, 1367
AvrII	CCTAGG	1 cut(s)	866
AxyI	CCTNAGG	1 cut(s)	2713
BaeGI	GKGCMC	1 cut(s)	75
BalI	TGGCCA	1 cut(s)	2328
BamHI	GGATCC	1 cut(s)	615
BanI	GGYRCC	1 cut(s)	439
BanII	GRGCYC	3 cut(s)	75, 2175, 2232
BbsI	GAAGAC	4 cut(s)	213, 723, 2220, 2400
Bbv12I	GWGCWC	1 cut(s)	2175
BccI	CCATC	8 cut(s)	499, 734, 945, 1042, 1200, 1725, 2072, 2324
BceAI	ACGGC	6 cut(s)	35, 195, 398, 1623, 2471, 2640
BciT130I	CCWGG	7 cut(s)	245, 510, 678, 1515, 1914, 2233, 2721
BclI	TGATCA	1 cut(s)	1465
BcnI	CCSGG	6 cut(s)	70, 75, 76, 111, 693, 2363
BcoDI	GTCTC	3 cut(s)	156, 1444, 2087
BcuI	ACTAGT	1 cut(s)	1723
BfaI	CTAG	6 cut(s)	831, 867, 1349, 1536, 1679, 1724
BfmI	CTRYAG	3 cut(s)	1578, 1941, 2073
BglI	GCCNNNNNGGC	1 cut(s)	2236
BglII	AGATCT	2 cut(s)	703, 823
BlnI	CCTAGG	1 cut(s)	866
BlpI	GCTNAGC	1 cut(s)	1790
BmcAI	AGTACT	1 cut(s)	2528
Bme18I	GGWCC	3 cut(s)	91, 879, 1367
BmeT110I	CYCGRG	2 cut(s)	74, 954
BmgBI	CACGTC	1 cut(s)	713
BmiI	GGNNCC	6 cut(s)	73, 92, 441, 589, 617, 2031
BmsI	GCATC	3 cut(s)	1657, 1696, 1722
BmtI	GCTAGC	1 cut(s)	1682
BpiI	GAAGAC	4 cut(s)	213, 723, 2220, 2400
BplI	GAGNNNNNCTC	2 cut(s)	1067, 1099
BpmI	CTGGAG	1 cut(s)	2742
Bpu1102I	GCTNAGC	1 cut(s)	1790
Bpu14I	TTCGAA	1 cut(s)	1999
BpuEI	CTTGAG	1 cut(s)	20
BpuMI	CCSGG	6 cut(s)	70, 75, 76, 111, 693, 2363
BsaAI	YACGTR	1 cut(s)	1479
BsaI	GGTCTC	1 cut(s)	2087
BsaWI	WCCGGW	3 cut(s)	93, 227, 2267
BsaXI	ACNNNNNCTCC	4 cut(s)	153, 183, 2497, 2527
Bse118I	RCCGGY	6 cut(s)	57, 436, 835, 881, 885, 1709
Bse1I	ACTGG	7 cut(s)	406, 941, 1003, 1304, 1739, 2329, 2734
Bse21I	CCTNAGG	1 cut(s)	2713
Bse3DI	GCAATG	1 cut(s)	191
BseAI	TCCGGA	2 cut(s)	93, 227
BseBI	CCWGG	7 cut(s)	245, 510, 678, 1515, 1914, 2233, 2721
BseGI	GGATG	7 cut(s)	491, 937, 964, 1425, 1506, 1713, 1936
BseMI	GCAATG	1 cut(s)	191
BseMII	CTCAG	4 cut(s)	739, 1354, 2133, 2727
BseNI	ACTGG	7 cut(s)	406, 941, 1003, 1304, 1739, 2329, 2734
BseRI	GAGGAG	4 cut(s)	866, 1151, 1457, 2075
BseSI	GKGCMC	1 cut(s)	75
BseX3I	CGGCCG	1 cut(s)	883
BseYI	CCCAGC	1 cut(s)	1292
Bsh1236I	CGCG	2 cut(s)	149, 2736
Bsh1285I	CGRYCG	1 cut(s)	886
BshNI	GGYRCC	1 cut(s)	439
BsiEI	CGRYCG	1 cut(s)	886
BsiHKAI	GWGCWC	1 cut(s)	2175
BsiHKCI	CYCGRG	2 cut(s)	74, 954
BslFI	GGGAC	2 cut(s)	473, 2220
BsmAI	GTCTC	3 cut(s)	156, 1444, 2087
BsmFI	GGGAC	2 cut(s)	473, 2220
BsmI	GAATGC	2 cut(s)	729, 2682
Bso31I	GGTCTC	1 cut(s)	2087
BsoBI	CYCGRG	2 cut(s)	74, 954
Bsp119I	TTCGAA	1 cut(s)	1999
Bsp120I	GGGCCC	1 cut(s)	71
Bsp1286I	GDGCHC	3 cut(s)	75, 2175, 2232
Bsp13I	TCCGGA	2 cut(s)	93, 227
Bsp1720I	GCTNAGC	1 cut(s)	1790
Bsp19I	CCATGG	1 cut(s)	1926
BspCNI	CTCAG	4 cut(s)	738, 1353, 2134, 2726
BspEI	TCCGGA	2 cut(s)	93, 227
BspFNI	CGCG	2 cut(s)	149, 2736
BspHI	TCATGA	1 cut(s)	1119
BspLI	GGNNCC	6 cut(s)	73, 92, 441, 589, 617, 2031
BspMAI	CTGCAG	2 cut(s)	1945, 2077
BspOI	GCTAGC	1 cut(s)	1682
BspT104I	TTCGAA	1 cut(s)	1999
BspT107I	GGYRCC	1 cut(s)	439
BspTNI	GGTCTC	1 cut(s)	2087
BsrDI	GCAATG	1 cut(s)	191
BsrFI	RCCGGY	6 cut(s)	57, 436, 835, 881, 885, 1709
BsrI	ACTGG	7 cut(s)	406, 941, 1003, 1304, 1739, 2329, 2734
BssAI	RCCGGY	6 cut(s)	57, 436, 835, 881, 885, 1709
BssT1I	CCWWGG	3 cut(s)	866, 1926, 2451
Bst2UI	CCWGG	7 cut(s)	245, 510, 678, 1515, 1914, 2233, 2721
Bst4CI	ACNGT	6 cut(s)	175, 487, 1112, 1161, 1367, 1543
Bst6I	CTCTTC	3 cut(s)	1442, 1996, 2517
BstBAI	YACGTR	1 cut(s)	1479
BstBI	TTCGAA	1 cut(s)	1999
BstC8I	GCNNGC	7 cut(s)	59, 368, 887, 1279, 1680, 1711, 2680
BstDEI	CTNAG	5 cut(s)	725, 1340, 1790, 2142, 2713
BstDSI	CCRYGG	2 cut(s)	1926, 2734
BstEII	GGTNACC	2 cut(s)	64, 523
BstF5I	GGATG	7 cut(s)	491, 937, 964, 1425, 1506, 1713, 1936
BstFNI	CGCG	2 cut(s)	149, 2736
BstHHI	GCGC	1 cut(s)	1836
BstMAI	GTCTC	3 cut(s)	156, 1444, 2087
BstMCI	CGRYCG	1 cut(s)	886
BstMWI	GCNNNNNNNGC	4 cut(s)	433, 1985, 2227, 2236
BstNI	CCWGG	7 cut(s)	245, 510, 678, 1515, 1914, 2233, 2721
BstNSI	RCATGY	2 cut(s)	672, 1834
BstPI	GGTNACC	2 cut(s)	64, 523
BstSFI	CTRYAG	3 cut(s)	1578, 1941, 2073
BstSLI	GKGCMC	1 cut(s)	75
BstUI	CGCG	2 cut(s)	149, 2736
BstV2I	GAAGAC	4 cut(s)	213, 723, 2220, 2400
BstX2I	RGATCY	7 cut(s)	240, 615, 703, 823, 904, 1351, 2020
BstXI	CCANNNNNNTGG	1 cut(s)	2482
BstYI	RGATCY	7 cut(s)	240, 615, 703, 823, 904, 1351, 2020
BstZI	CGGCCG	1 cut(s)	883
Bsu36I	CCTNAGG	1 cut(s)	2713
BtgI	CCRYGG	2 cut(s)	1926, 2734
BtrI	CACGTC	1 cut(s)	713
BtsCI	GGATG	7 cut(s)	491, 937, 964, 1425, 1506, 1713, 1936
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	5 cut(s)	24, 317, 483, 996, 1732
Cac8I	GCNNGC	7 cut(s)	59, 368, 887, 1279, 1680, 1711, 2680
CaiI	CAGNNNCTG	1 cut(s)	2720
CciI	TCATGA	1 cut(s)	1119
CfoI	GCGC	1 cut(s)	1836
Cfr10I	RCCGGY	6 cut(s)	57, 436, 835, 881, 885, 1709
Cfr42I	CCGCGG	1 cut(s)	2737
Cfr9I	CCCGGG	1 cut(s)	74
Csp6I	GTAC	9 cut(s)	451, 950, 1059, 1921, 2273, 2332, 2351, 2489, 2527
CspCI	CAANNNNNGTGG	2 cut(s)	2165, 2200
CviQI	GTAC	9 cut(s)	451, 950, 1059, 1921, 2273, 2332, 2351, 2489, 2527
DdeI	CTNAG	5 cut(s)	725, 1340, 1790, 2142, 2713
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
EaeI	YGGCCR	6 cut(s)	55, 883, 2326, 2364, 2484, 2731
EagI	CGGCCG	1 cut(s)	883
Eam1104I	CTCTTC	3 cut(s)	1442, 1996, 2517
EarI	CTCTTC	3 cut(s)	1442, 1996, 2517
EciI	GGCGGA	2 cut(s)	174, 2676
Ecl136II	GAGCTC	1 cut(s)	2173
EclXI	CGGCCG	1 cut(s)	883
Eco130I	CCWWGG	3 cut(s)	866, 1926, 2451
Eco147I	AGGCCT	2 cut(s)	859, 1576
Eco24I	GRGCYC	3 cut(s)	75, 2175, 2232
Eco31I	GGTCTC	1 cut(s)	2087
Eco47I	GGWCC	3 cut(s)	91, 879, 1367
Eco52I	CGGCCG	1 cut(s)	883
Eco53kI	GAGCTC	1 cut(s)	2173
Eco57I	CTGAAG	3 cut(s)	518, 2283, 2633
Eco81I	CCTNAGG	1 cut(s)	2713
Eco88I	CYCGRG	2 cut(s)	74, 954
Eco91I	GGTNACC	2 cut(s)	64, 523
EcoICRI	GAGCTC	1 cut(s)	2173
EcoO109I	RGGNCCY	2 cut(s)	587, 2717
EcoO65I	GGTNACC	2 cut(s)	64, 523
EcoRI	GAATTC	1 cut(s)	345
EcoRII	CCWGG	7 cut(s)	243, 508, 676, 1513, 1912, 2231, 2719
EcoT14I	CCWWGG	3 cut(s)	866, 1926, 2451
EcoT38I	GRGCYC	3 cut(s)	75, 2175, 2232
ErhI	CCWWGG	3 cut(s)	866, 1926, 2451
FalI	AAGNNNNNCTT	4 cut(s)	1002, 1034, 1173, 1205
FaqI	GGGAC	2 cut(s)	473, 2220
FauI	CCCGC	4 cut(s)	54, 1234, 1626, 2436
FbaI	TGATCA	1 cut(s)	1465
FokI	GGATG	7 cut(s)	478, 924, 971, 1432, 1513, 1700, 1943
FriOI	GRGCYC	3 cut(s)	75, 2175, 2232
FseI	GGCCGGCC	1 cut(s)	889
FspBI	CTAG	6 cut(s)	831, 867, 1349, 1536, 1679, 1724
GlaI	GCGC	1 cut(s)	1835
GsaI	CCCAGC	1 cut(s)	1296
GsuI	CTGGAG	1 cut(s)	2742
HhaI	GCGC	1 cut(s)	1836
Hin6I	GCGC	1 cut(s)	1834
HinP1I	GCGC	1 cut(s)	1834
HincII	GTYRAC	2 cut(s)	1309, 2306
HindII	GTYRAC	2 cut(s)	1309, 2306
HindIII	AAGCTT	3 cut(s)	1524, 1870, 2462
HinfI	GANTC	9 cut(s)	771, 1336, 1376, 1744, 1777, 2117, 2552, 2598, 2739
HphI	GGTGA	9 cut(s)	22, 58, 181, 259, 271, 749, 1189, 1460, 2551
Hpy166II	GTNNAC	6 cut(s)	790, 1309, 1363, 2273, 2306, 2542
Hpy188I	TCNGA	8 cut(s)	448, 496, 1087, 1335, 2143, 2164, 2605, 2762
Hpy8I	GTNNAC	6 cut(s)	790, 1309, 1363, 2273, 2306, 2542
Hpy99I	CGWCG	2 cut(s)	584, 714
HpyAV	CCTTC	8 cut(s)	91, 244, 274, 453, 1142, 1318, 2034, 2608
HpyCH4III	ACNGT	6 cut(s)	175, 487, 1112, 1161, 1367, 1543
HpyCH4IV	ACGT	4 cut(s)	105, 712, 1478, 1630
HpyCH4V	TGCA	7 cut(s)	185, 196, 1277, 1801, 1862, 1943, 2075
HpyF10VI	GCNNNNNNNGC	4 cut(s)	433, 1985, 2227, 2236
HpyF3I	CTNAG	5 cut(s)	725, 1340, 1790, 2142, 2713
HpySE526I	ACGT	4 cut(s)	105, 712, 1478, 1630
HspAI	GCGC	1 cut(s)	1834
Kpn2I	TCCGGA	2 cut(s)	93, 227
KroI	GCCGGC	3 cut(s)	57, 885, 1709
KroNI	GCCGGC	3 cut(s)	59, 887, 1711
Ksp22I	TGATCA	1 cut(s)	1465
KspI	CCGCGG	1 cut(s)	2737
LmnI	GCTCC	3 cut(s)	2035, 2178, 2675
LweI	GCATC	3 cut(s)	1657, 1696, 1722
MaeI	CTAG	6 cut(s)	831, 867, 1349, 1536, 1679, 1724
MaeII	ACGT	4 cut(s)	105, 712, 1478, 1630
MaeIII	GTNAC	9 cut(s)	64, 169, 175, 259, 382, 523, 1106, 2155, 2725
MfeI	CAATTG	1 cut(s)	1437
MflI	RGATCY	7 cut(s)	240, 615, 703, 823, 904, 1351, 2020
MhlI	GDGCHC	3 cut(s)	75, 2175, 2232
MlsI	TGGCCA	1 cut(s)	2328
MluNI	TGGCCA	1 cut(s)	2328
MlyI	GAGTC	2 cut(s)	1738, 1771
MmeI	TCCRAC	4 cut(s)	519, 537, 917, 1177
Mox20I	TGGCCA	1 cut(s)	2328
MroI	TCCGGA	2 cut(s)	93, 227
MroNI	GCCGGC	3 cut(s)	57, 885, 1709
MroXI	GAANNNNTTC	2 cut(s)	989, 2588
MscI	TGGCCA	1 cut(s)	2328
MseI	TTAA	6 cut(s)	699, 978, 1851, 1874, 2634, 2661
MslI	CAYNNNNRTG	2 cut(s)	1481, 2012
Msp20I	TGGCCA	1 cut(s)	2328
MspA1I	CMGCKG	5 cut(s)	156, 358, 1229, 1988, 2736
MunI	CAATTG	1 cut(s)	1437
Mva1269I	GAATGC	2 cut(s)	729, 2682
MvaI	CCWGG	7 cut(s)	245, 510, 678, 1515, 1914, 2233, 2721
MvnI	CGCG	2 cut(s)	149, 2736
MwoI	GCNNNNNNNGC	4 cut(s)	433, 1985, 2227, 2236
NaeI	GCCGGC	3 cut(s)	59, 887, 1711
NciI	CCSGG	6 cut(s)	70, 75, 76, 111, 693, 2363
NcoI	CCATGG	1 cut(s)	1926
NgoMIV	GCCGGC	3 cut(s)	57, 885, 1709
NheI	GCTAGC	1 cut(s)	1678
NlaIV	GGNNCC	6 cut(s)	73, 92, 441, 589, 617, 2031
NmuCI	GTSAC	6 cut(s)	64, 169, 175, 259, 1106, 2155
NspI	RCATGY	2 cut(s)	672, 1834
NspV	TTCGAA	1 cut(s)	1999
PagI	TCATGA	1 cut(s)	1119
PceI	AGGCCT	2 cut(s)	859, 1576
PctI	GAATGC	2 cut(s)	729, 2682
PdiI	GCCGGC	3 cut(s)	59, 887, 1711
PdmI	GAANNNNTTC	2 cut(s)	989, 2588
PfeI	GAWTC	7 cut(s)	771, 1336, 1376, 2117, 2552, 2598, 2739
PflFI	GACNNNGTC	1 cut(s)	1112
PflMI	CCANNNNNTGG	1 cut(s)	612
PfoI	TCCNGGA	2 cut(s)	109, 1912
PleI	GAGTC	2 cut(s)	1738, 1771
PpsI	GAGTC	2 cut(s)	1738, 1771
Ppu21I	YACGTR	1 cut(s)	1479
PsiI	TTATAA	1 cut(s)	1235
Psp124BI	GAGCTC	1 cut(s)	2175
Psp6I	CCWGG	7 cut(s)	243, 508, 676, 1513, 1912, 2231, 2719
PspEI	GGTNACC	2 cut(s)	64, 523
PspFI	CCCAGC	1 cut(s)	1292
PspGI	CCWGG	7 cut(s)	243, 508, 676, 1513, 1912, 2231, 2719
PspN4I	GGNNCC	6 cut(s)	73, 92, 441, 589, 617, 2031
PspOMI	GGGCCC	1 cut(s)	71
PstI	CTGCAG	2 cut(s)	1945, 2077
PstNI	CAGNNNCTG	1 cut(s)	2720
PsuI	RGATCY	7 cut(s)	240, 615, 703, 823, 904, 1351, 2020
PsyI	GACNNNGTC	1 cut(s)	1112
PvuII	CAGCTG	2 cut(s)	358, 1988
RigI	GGCCGGCC	1 cut(s)	889
RsaI	GTAC	9 cut(s)	452, 951, 1060, 1922, 2274, 2333, 2352, 2490, 2528
RsaNI	GTAC	9 cut(s)	451, 950, 1059, 1921, 2273, 2332, 2351, 2489, 2527
RseI	CAYNNNNRTG	2 cut(s)	1481, 2012
SacI	GAGCTC	1 cut(s)	2175
SacII	CCGCGG	1 cut(s)	2737
SaqAI	TTAA	6 cut(s)	699, 978, 1851, 1874, 2634, 2661
ScaI	AGTACT	1 cut(s)	2528
SchI	GAGTC	2 cut(s)	1738, 1771
SduI	GDGCHC	3 cut(s)	75, 2175, 2232
SfaNI	GCATC	3 cut(s)	1657, 1696, 1722
SfcI	CTRYAG	3 cut(s)	1578, 1941, 2073
Sfr303I	CCGCGG	1 cut(s)	2737
SfuI	TTCGAA	1 cut(s)	1999
SgrBI	CCGCGG	1 cut(s)	2737
SinI	GGWCC	3 cut(s)	91, 879, 1367
SmaI	CCCGGG	1 cut(s)	76
SmiMI	CAYNNNNRTG	2 cut(s)	1481, 2012
SmlI	CTYRAG	1 cut(s)	35
SmoI	CTYRAG	1 cut(s)	35
SpeI	ACTAGT	1 cut(s)	1723
SseBI	AGGCCT	2 cut(s)	859, 1576
SspMI	CTAG	6 cut(s)	831, 867, 1349, 1536, 1679, 1724
SstI	GAGCTC	1 cut(s)	2175
StuI	AGGCCT	2 cut(s)	859, 1576
StyI	CCWWGG	3 cut(s)	866, 1926, 2451
TaaI	ACNGT	6 cut(s)	175, 487, 1112, 1161, 1367, 1543
TaiI	ACGT	4 cut(s)	108, 715, 1481, 1633
TaqI	TCGA	5 cut(s)	579, 709, 969, 1074, 1999
TatI	WGTACW	3 cut(s)	1058, 2272, 2526
TauI	GCSGC	5 cut(s)	47, 50, 149, 159, 2736
TfiI	GAWTC	7 cut(s)	771, 1336, 1376, 2117, 2552, 2598, 2739
Tru1I	TTAA	6 cut(s)	699, 978, 1851, 1874, 2634, 2661
Tru9I	TTAA	6 cut(s)	699, 978, 1851, 1874, 2634, 2661
TscAI	CASTG	5 cut(s)	31, 317, 490, 1003, 1739
TseFI	GTSAC	6 cut(s)	64, 169, 175, 259, 1106, 2155
Tsp45I	GTSAC	6 cut(s)	64, 169, 175, 259, 1106, 2155
TspDTI	ATGAA	8 cut(s)	293, 313, 560, 1284, 1517, 2535, 2589, 2597
TspGWI	ACGGA	5 cut(s)	308, 597, 929, 1183, 1744
TspMI	CCCGGG	1 cut(s)	74
TspRI	CASTG	5 cut(s)	31, 317, 490, 1003, 1739
Tth111I	GACNNNGTC	1 cut(s)	1112
Van91I	CCANNNNNTGG	1 cut(s)	612
VpaK11BI	GGWCC	3 cut(s)	91, 879, 1367
XapI	RAATTY	5 cut(s)	345, 388, 1271, 1328, 2149
XceI	RCATGY	2 cut(s)	672, 1834
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1289, 2336, 2479
XmaI	CCCGGG	1 cut(s)	74
XmaJI	CCTAGG	1 cut(s)	866
XmnI	GAANNNNTTC	2 cut(s)	989, 2588
XspI	CTAG	6 cut(s)	831, 867, 1349, 1536, 1679, 1724
ZrmI	AGTACT	1 cut(s)	2528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.