Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013007

Physical Location & Seq

Genomic Coordinates Forward (+)

55302376 .. 55306479

Gene Structure 4104 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39965

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGTATGCATTGAATCAGCCACTGGTTTCTTTCAAGTCAAGCCTCGCCGGCGGCCGGAGGTCAACCGGGAAGGTCATCAAGCTCCGGAAGGCGCATGTCCCCAGTTTCGGGTCACGGCCCAATGGGCTTGGATCAGTCAGAGCCGTGATCAGCGGTGGTGACAAGGCGGCGGTGGAAGAAGCTTCAACTCCTCCATTGCAGAGCAAAGACATTAGTGGCACTTTGAAACCTTCTTCTTCTTCTCCGATCGAAGTCAAGGCGGCGGTGACGATCAGAAAGAAAATGAAGGAGAAGGTCTCGGAGAAGATTGAGGATCAGTGGGAGTTTTTTATTAATGGGATTGGTCAGGGGATTCTGATCCAGCTCATCAGTGAAGAAATTGACCCTGTTACTAATTCAGGAAAGATAGTGGAATCTGCTGTGAGAGGCTGGTTGCCAAAGCCATTACCATCGGAGCATTCCCACATAATTGAATATGCTGCTGATTTCACTGTCCCAATTGACTTTGGGTGTCCTGGAGCTGTTCGTGTTACTAATCTCCATGGCAAGGAGTTTTACTTGTTGGAGATTGTCATACATGGTTTCGATAAAGGCCCATTTTTCTTCCCTGCTAATACTTGGATCCATTCTCAGAAGGATAACTTCCAAAGTCGAATCATCTTCAAAAACCAAGCATACCTGCCATCACAAACACCAGCAGGGATTAAAGGTCTTCGACATGAAGACTTACTGAGTATTCGGGGCAATGGGAAGGGCAGGAGAAAGCCACATGATAGGATTTATGATTATGATGTTTACAATGAGTTGGGGAATCCTGACAAGAGTGAAGAATTAGCTAGGCCGGTCATTGGTGGCGAGGAGAGGCCTTATCCTCGGCGCTGTAGAACTGGCCGGCCTCCATCCAAGTCAGATCCTCTTACGGAGAGTAGAATCGAGAAGCCCCATCCAGTTTATGTGCCTCGTGATGAGACTTTTGAGGAGATTAAGCAAAATACTTTCTCTCGTGGAAGGTTGAAAGCTTTGCTCCACAATCTGTTACCGTCTCTTGCTGTTAAGTTGTCAAGTTCAGACATACCCTTCAAGTGCTTCTCTGATATAGATAAGCTATATAATGATGGTCTGCTCCCGAAAGATGACGATGAGCAGAAAGAATCAGTTCTGTTTTCAGGCAACATGATGAAACAGGTTCTTAATGCTGGAGGAGAGTGGTTGAAATATGAAATCCCTGCTATTATAAAAAGGGATAGATTTGCTTGGTTGCGTGATAATGAGTTTGCACGGCAAGCTTTAGCTGGAGTCAATCCAGTGAACATTGAGATTTTGAAGGAATTTCCAATTCTCAGCAAGTTAGATCCTGCTGTTTACGGCTCTCCAGAATCAGCTATCACGAAGGAATTGATAGAGCAAGAACTCGGTGGGATGAGTGTTGAAAAGGCTATTGAGGATAAGAGACTGTTTATACTTGACTACCATGATATATTTTTGCCATTTATTGAGAAGATGAACTCTTTGCCCGGAAGAAAAGCCTATGCCTCAAGGACAGTGTTCTTCTATACCAAGACTGGTTTTTTGAGACCTCTAGCTATAGAGCTTTCACTTCCACCAACACCTTCATCTCCTCAAAAAAAACATGTATATACTCATGGGCATCATGCTACTACACACTGGATTTGGAAGCTAGCCAAAGCTCATGTTTGCTCAAACGACGCTGGCGTCCATCAGCTAGTCAATCACTGGTTGAGGACTCATGCTTGCATGGAGCCGTATATAATTGCCACTCATAGGCAGCTTAGCACAATGCACCCCATCTACAAGCTACTTCATCCTCACATGCGCTACACCTTAGAAATTAATGCACTTGCAAGGCAGAGTTTAATAAATGGAGGGGGAGTAATCGAGGCTTCTTTTAGTCCGGGAAAATATGCCATGGAGGTAAGCTCGGCAGCTTACAAGAGTATGTGGAGGTTTGACTTGGAGGCATTACCGGCCGATCTTATTCGAAGAGGCATGGCTGTGGAAGATCCTTCAGAAGCTTGCGGCATAAAACTTGTAATTGAGGACTATCCATATGCTGCAGATGGTCTCCTTGTATGGTCTGCCATAAAAGAATGGGTAGAATCTTATGTGGAACGTTTCTACTCCGAGCCAAATTCTGTGACATCAGATGTTGAGCTCCAAGACTGGTGGAATGAGATCAAGAACAAGGGTCATGCTGACAAGCGGAACGAGCCCTGGTGGCCTAAACTTAATACCAAAGAGGACTTATCTGGTATACTTGCAATAATAATTTGGACTGCTTCAGGTCAACATGCTGCCATCAACTTTGGCCAGTACCCTTTTGGCAGTTATGTCCCAAACCGTCCTACCCTTATGAGAAAACTTATTCCACAAGAAGATGACCCTGATTATGAGAAGTTTCTTCAAAACCCGCAGCAAACTTTCCTGTCTTCCTTGGCAACAAAACTTCAAGCCACGAAAGTAATGGCCGTTCAAGATACTCTATCAACTCACTCCCCAGATGAAGAGTACTTGGGTCAGGTGAATCCTCTACATACCCATTGGATCAATGATCATGAAATTTTGGAGTTGTTCAAAAGATTCTCTTCTAGACTAGACGAGATAGAGAAGATCATTAACAGGAAAAACAAAGATGGCCACTTTAAAAACAGAAGCGGAGCAGGAATTCCCCCATATGAATTACTGATCCCTTCTTCAGGCCCAGGGGTAACTGGCCGTGGAATCCCCAACAGCATTTCTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006629 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0030258 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

920

Amino Acids

103.72

Weight (kDa)

8.19

Isoelectric Point (pI)

51.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipoxygenase	PF00305	235 - 903	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67560
fragaria_vesca	FvH4_4g24180 FvH4_4g24180
malus_domestica	MD13G1114000.v1.1 MD16G1113200.v1.1
prunus_persica	Prupe.1G232400_v2.0.a1
pyrus_communis	pycom13g09920 pycom16g09610
rosa_chinensis	RchiOBHm_Chr4g0430941
rosa_laevigata	RLG00000006936
rosa_multiflora	Rmu_sc0006263.1_g000014
rosa_roxburghii	Rroxscaffold_5G00372630
rosa_rugosa	Rorug04G0247400
rosa_samantha	Rh4AG304000 Rh4BG311300 Rh4CG327600 Rh4DG307400
rosa_wichuraiana	Rw4G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1235
AasI	GACNNNNNNGTC	1 cut(s)	1712
Acc36I	ACCTGC	1 cut(s)	687
AccI	GTMKAC	1 cut(s)	2272
AccIII	TCCGGA	1 cut(s)	84
AclI	AACGTT	1 cut(s)	2131
AcoI	YGGCCR	7 cut(s)	52, 889, 1986, 2326, 2484, 2653, 2731
AcsI	RAATTY	4 cut(s)	1328, 2149, 2577, 2682
AcuI	CTGAAG	3 cut(s)	2010, 2283, 2697
AcyI	GRCGYC	1 cut(s)	1713
AfaI	GTAC	2 cut(s)	2333, 2528
AfiI	CCNNNNNNNGG	7 cut(s)	54, 107, 108, 547, 848, 1782, 2714
AflIII	ACRYGT	1 cut(s)	1630
AjnI	CCWGG	3 cut(s)	514, 2231, 2719
Alw21I	GWGCWC	1 cut(s)	2175
Alw26I	GTCTC	6 cut(s)	301, 962, 1047, 1444, 1567, 2087
AlwNI	CAGNNNCTG	1 cut(s)	22
Aor13HI	TCCGGA	1 cut(s)	84
ApeKI	GCWGC	6 cut(s)	479, 1786, 1943, 2072, 2312, 2431
ApoI	RAATTY	4 cut(s)	1328, 2149, 2577, 2682
ArsI	GACNNNNNNTTYG	2 cut(s)	1552, 1584
AseI	ATTAAT	2 cut(s)	333, 1851
Asp700I	GAANNNNTTC	1 cut(s)	1155
AspLEI	GCGC	3 cut(s)	94, 879, 1836
AspS9I	GGNCC	3 cut(s)	117, 593, 2717
AsuC2I	CCSGG	3 cut(s)	67, 1515, 1914
AsuHPI	GGTGA	3 cut(s)	170, 277, 2551
AsuII	TTCGAA	1 cut(s)	1999
AsuNHI	GCTAGC	1 cut(s)	1678
BalI	TGGCCA	2 cut(s)	2328, 2655
BamHI	GGATCC	1 cut(s)	621
BanII	GRGCYC	2 cut(s)	2175, 2232
BauI	CACGAG	2 cut(s)	960, 1002
BbsI	GAAGAC	3 cut(s)	704, 729, 2439
Bbv12I	GWGCWC	1 cut(s)	2175
BbvI	GCAGC	6 cut(s)	466, 1798, 1955, 2059, 2299, 2443
BceAI	ACGGC	7 cut(s)	128, 131, 1295, 1381, 1747, 2471, 2718
BciT130I	CCWGG	3 cut(s)	516, 2233, 2721
BclI	TGATCA	2 cut(s)	147, 2569
BcnI	CCSGG	3 cut(s)	67, 1515, 1914
BcoDI	GTCTC	6 cut(s)	301, 962, 1047, 1444, 1567, 2087
BfaI	CTAG	6 cut(s)	837, 1580, 1679, 1724, 2607, 2612
BfmI	CTRYAG	3 cut(s)	880, 1584, 2073
BfoI	RGCGCY	1 cut(s)	880
BfuAI	ACCTGC	1 cut(s)	687
BglI	GCCNNNNNGGC	3 cut(s)	48, 124, 2236
BlpI	GCTNAGC	1 cut(s)	1790
BmcAI	AGTACT	1 cut(s)	2528
Bme1390I	CCNGG	6 cut(s)	67, 516, 1515, 1914, 2233, 2721
BmgT120I	GGNCC	3 cut(s)	117, 593, 2717
BmiI	GGNNCC	2 cut(s)	623, 1761
BmrFI	CCNGG	6 cut(s)	67, 516, 1515, 1914, 2233, 2721
BmrI	ACTGGG	1 cut(s)	96
BmsI	GCATC	1 cut(s)	1657
BmtI	GCTAGC	1 cut(s)	1682
BmuI	ACTGGG	1 cut(s)	96
BpiI	GAAGAC	3 cut(s)	704, 729, 2439
BplI	GAGNNNNNCTC	4 cut(s)	281, 313, 1922, 1954
BpmI	CTGGAG	4 cut(s)	537, 1218, 1314, 1356
Bpu1102I	GCTNAGC	1 cut(s)	1790
Bpu14I	TTCGAA	1 cut(s)	1999
BpuEI	CTTGAG	1 cut(s)	1519
BpuMI	CCSGG	3 cut(s)	67, 1515, 1914
BsaBI	GATNNNNATC	1 cut(s)	356
BsaHI	GRCGYC	1 cut(s)	1713
BsaI	GGTCTC	3 cut(s)	301, 1567, 2087
BsaJI	CCNNGG	8 cut(s)	541, 872, 1926, 2231, 2451, 2719, 2720, 2734
BsaWI	WCCGGW	1 cut(s)	84
BsaXI	ACNNNNNCTCC	2 cut(s)	1875, 1905
Bsc4I	CCNNNNNNNGG	7 cut(s)	54, 107, 108, 547, 848, 1782, 2714
Bse118I	RCCGGY	4 cut(s)	47, 841, 891, 1984
Bse3DI	GCAATG	2 cut(s)	194, 751
Bse8I	GATNNNNATC	1 cut(s)	356
BseAI	TCCGGA	1 cut(s)	84
BseBI	CCWGG	3 cut(s)	516, 2233, 2721
BseDI	CCNNGG	8 cut(s)	541, 872, 1926, 2231, 2451, 2719, 2720, 2734
BseGI	GGATG	4 cut(s)	899, 943, 1425, 1822
BseJI	GATNNNNATC	1 cut(s)	356
BseLI	CCNNNNNNNGG	7 cut(s)	54, 107, 108, 547, 848, 1782, 2714
BseMI	GCAATG	2 cut(s)	194, 751
BseMII	CTCAG	3 cut(s)	644, 722, 1354
BseRI	GAGGAG	5 cut(s)	180, 872, 992, 1215, 1608
BseX3I	CGGCCG	2 cut(s)	52, 1986
BseXI	GCAGC	6 cut(s)	466, 1798, 1955, 2059, 2299, 2443
Bsh1285I	CGRYCG	3 cut(s)	55, 249, 1989
BsiEI	CGRYCG	3 cut(s)	55, 249, 1989
BsiHKAI	GWGCWC	1 cut(s)	2175
BsiSI	CCGG	9 cut(s)	48, 55, 66, 85, 842, 892, 1515, 1913, 1985
BslFI	GGGAC	3 cut(s)	83, 479, 2336
BslI	CCNNNNNNNGG	7 cut(s)	54, 107, 108, 547, 848, 1782, 2714
BsmAI	GTCTC	6 cut(s)	301, 962, 1047, 1444, 1567, 2087
BsmBI	CGTCTC	1 cut(s)	1047
BsmFI	GGGAC	3 cut(s)	83, 479, 2336
BsmI	GAATGC	1 cut(s)	457
Bso31I	GGTCTC	3 cut(s)	301, 1567, 2087
Bsp119I	TTCGAA	1 cut(s)	1999
Bsp1286I	GDGCHC	2 cut(s)	2175, 2232
Bsp13I	TCCGGA	1 cut(s)	84
Bsp1720I	GCTNAGC	1 cut(s)	1790
Bsp19I	CCATGG	2 cut(s)	541, 1926
BspCNI	CTCAG	3 cut(s)	643, 723, 1353
BspEI	TCCGGA	1 cut(s)	84
BspHI	TCATGA	1 cut(s)	2572
BspLI	GGNNCC	2 cut(s)	623, 1761
BspMAI	CTGCAG	1 cut(s)	2077
BspMI	ACCTGC	1 cut(s)	687
BspOI	GCTAGC	1 cut(s)	1682
BspT104I	TTCGAA	1 cut(s)	1999
BspTNI	GGTCTC	3 cut(s)	301, 1567, 2087
BsrDI	GCAATG	2 cut(s)	194, 751
BsrFI	RCCGGY	4 cut(s)	47, 841, 891, 1984
BssAI	RCCGGY	4 cut(s)	47, 841, 891, 1984
BssECI	CCNNGG	8 cut(s)	541, 872, 1926, 2231, 2451, 2719, 2720, 2734
BssNAI	GTATAC	1 cut(s)	2273
BssNI	GRCGYC	1 cut(s)	1713
BssSI	CACGAG	2 cut(s)	960, 1002
BssT1I	CCWWGG	3 cut(s)	541, 1926, 2451
Bst1107I	GTATAC	1 cut(s)	2273
Bst2BI	CACGAG	2 cut(s)	960, 1002
Bst2UI	CCWGG	3 cut(s)	516, 2233, 2721
Bst4CI	ACNGT	5 cut(s)	493, 1041, 1455, 1543, 2360
Bst6I	CTCTTC	3 cut(s)	1996, 2517, 2608
BstACI	GRCGYC	1 cut(s)	1713
BstBI	TTCGAA	1 cut(s)	1999
BstC8I	GCNNGC	7 cut(s)	49, 893, 1284, 1680, 1711, 1753, 2035
BstDEI	CTNAG	5 cut(s)	630, 731, 1340, 1790, 1843
BstDSI	CCRYGG	3 cut(s)	541, 1926, 2734
BstENI	CCTNNNNNAGG	1 cut(s)	2712
BstF5I	GGATG	4 cut(s)	899, 943, 1425, 1822
BstH2I	RGCGCY	1 cut(s)	880
BstHHI	GCGC	3 cut(s)	94, 879, 1836
BstMAI	GTCTC	6 cut(s)	301, 962, 1047, 1444, 1567, 2087
BstMCI	CGRYCG	3 cut(s)	55, 249, 1989
BstMWI	GCNNNNNNNGC	6 cut(s)	48, 124, 1283, 1985, 2227, 2236
BstNI	CCWGG	3 cut(s)	516, 2233, 2721
BstNSI	RCATGY	4 cut(s)	98, 1634, 1834, 2312
BstSCI	CCNGG	6 cut(s)	65, 514, 1513, 1912, 2231, 2719
BstSFI	CTRYAG	3 cut(s)	880, 1584, 2073
BstV1I	GCAGC	6 cut(s)	466, 1798, 1955, 2059, 2299, 2443
BstV2I	GAAGAC	3 cut(s)	704, 729, 2439
BstX2I	RGATCY	4 cut(s)	621, 910, 1351, 2020
BstYI	RGATCY	4 cut(s)	621, 910, 1351, 2020
BstZ17I	GTATAC	1 cut(s)	2273
BstZI	CGGCCG	2 cut(s)	52, 1986
BtgI	CCRYGG	3 cut(s)	541, 1926, 2734
BtsCI	GGATG	4 cut(s)	899, 943, 1425, 1822
BtsIMutI	CAGTG	8 cut(s)	20, 323, 376, 489, 1311, 1548, 1663, 1732
BveI	ACCTGC	1 cut(s)	687
Cac8I	GCNNGC	7 cut(s)	49, 893, 1284, 1680, 1711, 1753, 2035
CaiI	CAGNNNCTG	1 cut(s)	22
CciI	TCATGA	1 cut(s)	2572
CfoI	GCGC	3 cut(s)	94, 879, 1836
Cfr10I	RCCGGY	4 cut(s)	47, 841, 891, 1984
Cfr13I	GGNCC	3 cut(s)	117, 593, 2717
CseI	GACGC	2 cut(s)	1702, 1715
Csp6I	GTAC	2 cut(s)	2332, 2527
CspCI	CAANNNNNGTGG	2 cut(s)	2165, 2200
CviQI	GTAC	2 cut(s)	2332, 2527
DdeI	CTNAG	5 cut(s)	630, 731, 1340, 1790, 1843
DraI	TTTAAA	1 cut(s)	2662
DrdI	GACNNNNNNGTC	1 cut(s)	1712
DseDI	GACNNNNNNGTC	1 cut(s)	1712
EaeI	YGGCCR	7 cut(s)	52, 889, 1986, 2326, 2484, 2653, 2731
EagI	CGGCCG	2 cut(s)	52, 1986
Eam1104I	CTCTTC	3 cut(s)	1996, 2517, 2608
EarI	CTCTTC	3 cut(s)	1996, 2517, 2608
Ecl136II	GAGCTC	1 cut(s)	2173
EclXI	CGGCCG	2 cut(s)	52, 1986
Eco130I	CCWWGG	3 cut(s)	541, 1926, 2451
Eco147I	AGGCCT	1 cut(s)	865
Eco24I	GRGCYC	2 cut(s)	2175, 2232
Eco31I	GGTCTC	3 cut(s)	301, 1567, 2087
Eco52I	CGGCCG	2 cut(s)	52, 1986
Eco53kI	GAGCTC	1 cut(s)	2173
Eco57I	CTGAAG	3 cut(s)	2010, 2283, 2697
EcoICRI	GAGCTC	1 cut(s)	2173
EcoNI	CCTNNNNNAGG	1 cut(s)	2712
EcoRI	GAATTC	1 cut(s)	2682
EcoRII	CCWGG	3 cut(s)	514, 2231, 2719
EcoT14I	CCWWGG	3 cut(s)	541, 1926, 2451
EcoT22I	ATGCAT	1 cut(s)	10
EcoT38I	GRGCYC	2 cut(s)	2175, 2232
ErhI	CCWWGG	3 cut(s)	541, 1926, 2451
Esp3I	CGTCTC	1 cut(s)	1047
FalI	AAGNNNNNCTT	4 cut(s)	626, 658, 2587, 2619
FaqI	GGGAC	3 cut(s)	83, 479, 2336
FauI	CCCGC	1 cut(s)	2436
FauNDI	CATATG	2 cut(s)	2068, 2692
FbaI	TGATCA	2 cut(s)	147, 2569
FblI	GTMKAC	1 cut(s)	2272
FokI	GGATG	4 cut(s)	886, 930, 1432, 1809
FriOI	GRGCYC	2 cut(s)	2175, 2232
FseI	GGCCGGCC	1 cut(s)	895
FspBI	CTAG	6 cut(s)	837, 1580, 1679, 1724, 2607, 2612
GlaI	GCGC	3 cut(s)	93, 878, 1835
GsuI	CTGGAG	4 cut(s)	537, 1218, 1314, 1356
HaeII	RGCGCY	1 cut(s)	880
HapII	CCGG	9 cut(s)	48, 55, 66, 85, 842, 892, 1515, 1913, 1985
HgaI	GACGC	2 cut(s)	1702, 1715
HhaI	GCGC	3 cut(s)	94, 879, 1836
Hin1I	GRCGYC	1 cut(s)	1713
Hin6I	GCGC	3 cut(s)	92, 877, 1834
HinP1I	GCGC	3 cut(s)	92, 877, 1834
HincII	GTYRAC	2 cut(s)	63, 2306
HindII	GTYRAC	2 cut(s)	63, 2306
HindIII	AAGCTT	4 cut(s)	180, 1017, 1284, 2031
HpaII	CCGG	9 cut(s)	48, 55, 66, 85, 842, 892, 1515, 1913, 1985
HphI	GGTGA	3 cut(s)	170, 277, 2551
Hpy166II	GTNNAC	6 cut(s)	63, 796, 1309, 1363, 2273, 2306
Hpy8I	GTNNAC	6 cut(s)	63, 796, 1309, 1363, 2273, 2306
Hpy99I	CGWCG	1 cut(s)	1709
HpyCH4III	ACNGT	5 cut(s)	493, 1041, 1455, 1543, 2360
HpyCH4IV	ACGT	1 cut(s)	2131
HpyCH4V	TGCA	9 cut(s)	8, 199, 1277, 1755, 1801, 1856, 1862, 2075, 2279
HpyF10VI	GCNNNNNNNGC	6 cut(s)	48, 124, 1283, 1985, 2227, 2236
HpyF3I	CTNAG	5 cut(s)	630, 731, 1340, 1790, 1843
HpySE526I	ACGT	1 cut(s)	2131
Hsp92I	GRCGYC	1 cut(s)	1713
HspAI	GCGC	3 cut(s)	92, 877, 1834
Kpn2I	TCCGGA	1 cut(s)	84
KroI	GCCGGC	2 cut(s)	47, 891
KroNI	GCCGGC	2 cut(s)	49, 893
Ksp22I	TGATCA	2 cut(s)	147, 2569
LmnI	GCTCC	8 cut(s)	87, 454, 518, 1029, 1128, 1759, 2178, 2675
Lsp1109I	GCAGC	6 cut(s)	466, 1798, 1955, 2059, 2299, 2443
LweI	GCATC	1 cut(s)	1657
MaeI	CTAG	6 cut(s)	837, 1580, 1679, 1724, 2607, 2612
MaeII	ACGT	1 cut(s)	2131
MaeIII	GTNAC	8 cut(s)	111, 158, 265, 388, 529, 1035, 2155, 2725
MfeI	CAATTG	1 cut(s)	498
MflI	RGATCY	4 cut(s)	621, 910, 1351, 2020
MhlI	GDGCHC	2 cut(s)	2175, 2232
MlsI	TGGCCA	2 cut(s)	2328, 2655
MluNI	TGGCCA	2 cut(s)	2328, 2655
MlyI	GAGTC	2 cut(s)	1305, 1738
MmeI	TCCRAC	1 cut(s)	543
Mox20I	TGGCCA	2 cut(s)	2328, 2655
Mph1103I	ATGCAT	1 cut(s)	10
MreI	CGCCGGCG	1 cut(s)	47
MroI	TCCGGA	1 cut(s)	84
MroNI	GCCGGC	2 cut(s)	47, 891
MroXI	GAANNNNTTC	1 cut(s)	1155
MscI	TGGCCA	2 cut(s)	2328, 2655
MslI	CAYNNNNRTG	1 cut(s)	2012
Msp20I	TGGCCA	2 cut(s)	2328, 2655
MspA1I	CMGCKG	1 cut(s)	153
MspI	CCGG	9 cut(s)	48, 55, 66, 85, 842, 892, 1515, 1913, 1985
MspR9I	CCNGG	6 cut(s)	67, 516, 1515, 1914, 2233, 2721
MunI	CAATTG	1 cut(s)	498
Mva1269I	GAATGC	1 cut(s)	457
MvaI	CCWGG	3 cut(s)	516, 2233, 2721
MwoI	GCNNNNNNNGC	6 cut(s)	48, 124, 1283, 1985, 2227, 2236
NaeI	GCCGGC	2 cut(s)	49, 893
NciI	CCSGG	3 cut(s)	67, 1515, 1914
NcoI	CCATGG	2 cut(s)	541, 1926
NdeI	CATATG	2 cut(s)	2068, 2692
NgoMIV	GCCGGC	2 cut(s)	47, 891
NheI	GCTAGC	1 cut(s)	1678
NlaIV	GGNNCC	2 cut(s)	623, 1761
NmeAIII	GCCGAG	2 cut(s)	853, 1919
NmuCI	GTSAC	4 cut(s)	111, 158, 265, 2155
NsiI	ATGCAT	1 cut(s)	10
NspI	RCATGY	4 cut(s)	98, 1634, 1834, 2312
NspV	TTCGAA	1 cut(s)	1999
PagI	TCATGA	1 cut(s)	2572
PasI	CCCWGGG	1 cut(s)	2720
PceI	AGGCCT	1 cut(s)	865
PciI	ACATGT	1 cut(s)	1630
PcsI	WCGNNNNNNNCGW	1 cut(s)	1710
PctI	GAATGC	1 cut(s)	457
PdiI	GCCGGC	2 cut(s)	49, 893
PdmI	GAANNNNTTC	1 cut(s)	1155
PfoI	TCCNGGA	2 cut(s)	514, 1912
Ple19I	CGATCG	1 cut(s)	249
PleI	GAGTC	2 cut(s)	1304, 1738
PpsI	GAGTC	2 cut(s)	1304, 1738
PscI	ACATGT	1 cut(s)	1630
PshBI	ATTAAT	2 cut(s)	333, 1851
PsiI	TTATAA	1 cut(s)	1235
Psp124BI	GAGCTC	1 cut(s)	2175
Psp1406I	AACGTT	1 cut(s)	2131
Psp6I	CCWGG	3 cut(s)	514, 2231, 2719
PspGI	CCWGG	3 cut(s)	514, 2231, 2719
PspN4I	GGNNCC	2 cut(s)	623, 1761
PspPI	GGNCC	3 cut(s)	117, 593, 2717
PsrI	GAACNNNNNNTAC	2 cut(s)	2472, 2504
PstI	CTGCAG	1 cut(s)	2077
PstNI	CAGNNNCTG	1 cut(s)	22
PsuI	RGATCY	4 cut(s)	621, 910, 1351, 2020
PvuI	CGATCG	1 cut(s)	249
RigI	GGCCGGCC	1 cut(s)	895
RsaI	GTAC	2 cut(s)	2333, 2528
RsaNI	GTAC	2 cut(s)	2332, 2527
RseI	CAYNNNNRTG	1 cut(s)	2012
SacI	GAGCTC	1 cut(s)	2175
Sau96I	GGNCC	3 cut(s)	117, 593, 2717
ScaI	AGTACT	1 cut(s)	2528
SchI	GAGTC	2 cut(s)	1305, 1738
ScrFI	CCNGG	6 cut(s)	67, 516, 1515, 1914, 2233, 2721
SduI	GDGCHC	2 cut(s)	2175, 2232
SfaNI	GCATC	1 cut(s)	1657
SfcI	CTRYAG	3 cut(s)	880, 1584, 2073
SfuI	TTCGAA	1 cut(s)	1999
SgrAI	CRCCGGYG	1 cut(s)	47
SmiMI	CAYNNNNRTG	1 cut(s)	2012
SmlI	CTYRAG	1 cut(s)	1534
SmoI	CTYRAG	1 cut(s)	1534
SseBI	AGGCCT	1 cut(s)	865
SspMI	CTAG	6 cut(s)	837, 1580, 1679, 1724, 2607, 2612
SstI	GAGCTC	1 cut(s)	2175
StuI	AGGCCT	1 cut(s)	865
StyD4I	CCNGG	6 cut(s)	65, 514, 1513, 1912, 2231, 2719
StyI	CCWWGG	3 cut(s)	541, 1926, 2451
TaaI	ACNGT	5 cut(s)	493, 1041, 1455, 1543, 2360
TaiI	ACGT	1 cut(s)	2134
TaqI	TCGA	7 cut(s)	249, 585, 652, 715, 933, 1896, 1999
TatI	WGTACW	1 cut(s)	2526
TauI	GCSGC	4 cut(s)	54, 170, 263, 2040
TscAI	CASTG	8 cut(s)	27, 323, 376, 496, 1311, 1548, 1670, 1739
TseFI	GTSAC	4 cut(s)	111, 158, 265, 2155
TseI	GCWGC	6 cut(s)	479, 1786, 1943, 2072, 2312, 2431
Tsp45I	GTSAC	4 cut(s)	111, 158, 265, 2155
TspGWI	ACGGA	1 cut(s)	935
TspRI	CASTG	8 cut(s)	27, 323, 376, 496, 1311, 1548, 1670, 1739
VspI	ATTAAT	2 cut(s)	333, 1851
XagI	CCTNNNNNAGG	1 cut(s)	2712
XapI	RAATTY	4 cut(s)	1328, 2149, 2577, 2682
XbaI	TCTAGA	1 cut(s)	2606
XceI	RCATGY	4 cut(s)	98, 1634, 1834, 2312
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2336, 2479
XmiI	GTMKAC	1 cut(s)	2272
XmnI	GAANNNNTTC	1 cut(s)	1155
XspI	CTAG	6 cut(s)	837, 1580, 1679, 1724, 2607, 2612
ZrmI	AGTACT	1 cut(s)	2528
Zsp2I	ATGCAT	1 cut(s)	10

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.