Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0013007

Physical Location & Seq

Genomic Coordinates Forward (+)

61611764 .. 61615215

Gene Structure 3452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG304000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGGTACAGAGAAGTTTTGCTTTGGGTTTCTTTTGGTTTGGTGGTATGTAATATTTGTTCCCATTTTTGTTCTTGTAGTTACTAATTCAGGAAAGATAGTGGAATCTGCTGTGAGAGGCTGGTTGCCAAAGCCAGTACCATCGGAGCATTCCCACATAATTGAGTATGCTGCTGATTTCACTGTCCCAAGTGACTTTGGGTGTCCTGGAGCTGTTCGTGTTACTAATCTCCATGGCAAGGAGTTTTACTTGTTGGAGATTGTCATACATGGTTTCGATAAAGGCCCATTTTTCTTCCCTGCAAATACTTGGATCCATTCTCAGAAGGATAACTTCCAAAGTCGAATCATCTTCAAAAACCAAGCATACCTGCCATCACAAACACCAGCAGGGATTAAAGGTCTTCGACATGAAGACTTACTGAGTATTCGGGGCAATGGGAAGGGCAGGAGAAAGCCACATGATAGGATTTATGATTATGATGTTTACAATGAGTTGGGGAATCCTGACAAGAGTGAAGAATTAGCTAGGCCGGTCATTGGTGGCGAGGAGAGGCCTTATCCTCGGCGCTGTAGAACTGGCCGGCCTCCATCCAAGTCAGATCCTCTTACGGAGAGTAGAATCGAGAAGCCCCATCCGGTTTATGTGCCTCGTGATGAGACTTTTGAGGAGATTAAGCAAAATACTTTCTCTCGTGGAAGGTTGAAAGCTTTGCTCCACAATCTGTTACCGTCTCTTGCTGTTAAGTTGTCAAGTTCAGACATACCCTTCAAGTGCTTCTCTGATATAGATAAGCTATATAATGATGGTCTCCTCCCGAAAGATGACGATGAGCAGAAAGAATCCGTTCTGTTTTCAGGCAACATGATGAAACAGGTTCTTAATGTTGGAGGAGAGTGGTTGAAATACGAAATCCCTGCTATTATAAAAAGGGATAGATTTGCTTGGTTGCGTGATAATGAGTTTGCACGGCAAGCTTTAGCTGGAGTCAATCCAGTGAACATTGAGATTTTGAAGGAATTTCCAATTCTCAGCAAGTTAGATCCTGCTGTTTACGGCCCTCCAGAATCTGCTATCACGAAGGAATTGATAGAGGAAGAACTCGGTGGGATGAGTGTTGAAAAGGCTATTGAGGATAAGAGACTGTTTATACTTGACTACCATGATATATTTTTGCCATTTATTGAGAAGATGAACTCTTTGCCCGGAAGAAAAGCCTATGCCTCAAGGACAGTGTTCTTCTATACCAAGACTGGTTTTTTGAGACCTCTAGCTATAGAGTTGTCACTTCCACCAACACCTTCATCTCCTCAAACAAAACATGTATATACTCATGGGCATCATGCTACTACACACTGGATTTGGAAGCTAGCCAAAGCTCATGTTTGCTCAAACGACGCCGGCGTCCATCAGCTAGTCAATCACTGGTTGAGGACTCATGCTTGCATGGAGCCGTATATAATTGCCACTCATAGGCAGCTTAGCTCAGTGCACCCCATCTACAAGCTACTTCATCCTCACATGCGCTACACCTTGGAAATTAATGCACTAGCAAGGCAGAGTTTAATAAATGGAGGGGGAGTAATCGAGGCTTCTTTTAGTCCGGGAAAATATGCCATGGAGGTAAGCTCGGCAGCTTACAAGAGTGTGTGGAGGTTTGACTTGGAGGCATTACCGGCCGATCTTATTCGAAGAGGCATGGCTGTTGAAGATCCTTCGGAACCTTGCGGCATAAAACTTGTAATTGAGGACTATCCATATGCTGCAGATGGTCTCCTTGTATGGTCTGCCATAAAAGAATGGGTAGAATCTTATGTGGAACGTTTCTACTCCGAGCCAAATTCTGTGACATCAGATGTTGAGCTCCAAGACTGGTGGAATGAGATCAAGAACAAGGGTCATGCTGACAAGCGGAACGAGCCCTGGTGGCCTAAACTTAATACCAAAGAGGACTTATCTGGTATACTTACAATAATAATTTGGACTGCTTCAGGTCAACATGCTGCCATCAACTTTGGCCAGTACCCTTTTGGCAGTTATGTCCCAAACCGTCCTACCCTTATGAGAAAACTTATTCCACAAGAAGATGACCCTGATTATGAGAAGTTTCTTCAAAACCCGCAGCAAACTTTCCTGTCTTCCTTGGCAACAAAACTTCAAGCCACGAAAGTAATGGCCGTTCAAGATACTCTATCAACTCACTCCCCAGATGAAGAGTACTTGGGTCAGGTGAATCCTCTACATACCCATTGGATCAATGATCATGAAATTTTGGAGTTGTTCAAAAGATTCTCTTCTAGACTAGACGAGATAGAGAAGATCATTAACAGGAAAAACAAAGATGGCCACTTTAAAAACAGAAGCGGAGCAGGAATTCCCCCATATGAATTGCTGATCCCTTCTTCAGGCCCAGGGGTAACTGGCCGTGGAATCCCCAACAGCATTTCTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006629 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0030258 GO:0032787 GO:0034440 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0051213 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

817

Amino Acids

93.01

Weight (kDa)

6.68

Isoelectric Point (pI)

48.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipoxygenase	PF00305	132 - 800	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67560
fragaria_vesca	FvH4_4g24180 FvH4_4g24180
malus_domestica	MD13G1114000.v1.1 MD16G1113200.v1.1
prunus_persica	Prupe.1G232400_v2.0.a1
pyrus_communis	pycom13g09920 pycom16g09610
rosa_chinensis	RchiOBHm_Chr4g0430941
rosa_laevigata	RLG00000006936
rosa_multiflora	Rmu_sc0006263.1_g000014
rosa_roxburghii	Rroxscaffold_5G00372630
rosa_rugosa	Rorug04G0247400
rosa_samantha	Rh4AG304000 Rh4BG311300 Rh4CG327600 Rh4DG307400
rosa_wichuraiana	Rw4G026350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	926
AasI	GACNNNNNNGTC	1 cut(s)	1403
Acc36I	ACCTGC	1 cut(s)	378
AccI	GTMKAC	1 cut(s)	1963
AciI	CCGC	4 cut(s)	1728, 1912, 2120, 2364
AclI	AACGTT	1 cut(s)	1822
AclWI	GGATC	7 cut(s)	307, 320, 596, 1037, 1706, 2261, 2389
AcoI	YGGCCR	6 cut(s)	580, 1677, 2017, 2175, 2344, 2422
AcsI	RAATTY	4 cut(s)	1019, 1840, 2268, 2373
AcuI	CTGAAG	2 cut(s)	1974, 2388
AcyI	GRCGYC	2 cut(s)	1398, 1404
AfaI	GTAC	4 cut(s)	7, 138, 2024, 2219
AfiI	CCNNNNNNNGG	4 cut(s)	238, 539, 1473, 2405
AflIII	ACRYGT	1 cut(s)	1321
AjnI	CCWGG	3 cut(s)	205, 1922, 2410
Alw21I	GWGCWC	2 cut(s)	1494, 1866
Alw26I	GTCTC	6 cut(s)	653, 738, 815, 1135, 1258, 1778
Alw44I	GTGCAC	1 cut(s)	1490
AlwI	GGATC	7 cut(s)	307, 320, 596, 1037, 1706, 2261, 2389
AlwNI	CAGNNNCTG	1 cut(s)	1070
ApaLI	GTGCAC	1 cut(s)	1490
ApeKI	GCWGC	6 cut(s)	170, 1477, 1634, 1763, 2003, 2122
ApoI	RAATTY	4 cut(s)	1019, 1840, 2268, 2373
ArsI	GACNNNNNNTTYG	2 cut(s)	1243, 1275
AseI	ATTAAT	1 cut(s)	1542
Asp700I	GAANNNNTTC	1 cut(s)	846
AspLEI	GCGC	2 cut(s)	570, 1527
AspS9I	GGNCC	3 cut(s)	284, 1058, 2408
AsuC2I	CCSGG	2 cut(s)	1206, 1605
AsuHPI	GGTGA	1 cut(s)	2242
AsuII	TTCGAA	1 cut(s)	1690
AsuNHI	GCTAGC	1 cut(s)	1369
BaeGI	GKGCMC	1 cut(s)	1494
BalI	TGGCCA	2 cut(s)	2019, 2346
BamHI	GGATCC	1 cut(s)	312
BanII	GRGCYC	2 cut(s)	1866, 1923
BauI	CACGAG	2 cut(s)	651, 693
BbsI	GAAGAC	3 cut(s)	395, 420, 2130
Bbv12I	GWGCWC	2 cut(s)	1494, 1866
BbvI	GCAGC	6 cut(s)	157, 1489, 1646, 1750, 1990, 2134
BceAI	ACGGC	5 cut(s)	986, 1072, 1438, 2162, 2409
BcgI	CGANNNNNNTGC	2 cut(s)	899, 933
BciT130I	CCWGG	3 cut(s)	207, 1924, 2412
BclI	TGATCA	1 cut(s)	2260
BcnI	CCSGG	2 cut(s)	1206, 1605
BcoDI	GTCTC	6 cut(s)	653, 738, 815, 1135, 1258, 1778
BfaI	CTAG	7 cut(s)	528, 1271, 1370, 1415, 1550, 2298, 2303
BfmI	CTRYAG	3 cut(s)	571, 1275, 1764
BfoI	RGCGCY	1 cut(s)	571
BfuAI	ACCTGC	1 cut(s)	378
BglI	GCCNNNNNGGC	1 cut(s)	1927
BisI	GCNGC	7 cut(s)	171, 1478, 1635, 1729, 1764, 2004, 2123
BlpI	GCTNAGC	1 cut(s)	1481
BlsI	GCNGC	7 cut(s)	172, 1479, 1636, 1730, 1765, 2005, 2124
BmcAI	AGTACT	1 cut(s)	2219
Bme1390I	CCNGG	5 cut(s)	207, 1206, 1605, 1924, 2412
BmgT120I	GGNCC	3 cut(s)	284, 1058, 2408
BmiI	GGNNCC	3 cut(s)	314, 1452, 1722
BmrFI	CCNGG	5 cut(s)	207, 1206, 1605, 1924, 2412
BmsI	GCATC	1 cut(s)	1348
BmtI	GCTAGC	1 cut(s)	1373
BpiI	GAAGAC	3 cut(s)	395, 420, 2130
BplI	GAGNNNNNCTC	2 cut(s)	1613, 1645
BpmI	CTGGAG	3 cut(s)	228, 1005, 1047
Bpu1102I	GCTNAGC	1 cut(s)	1481
Bpu14I	TTCGAA	1 cut(s)	1690
BpuEI	CTTGAG	1 cut(s)	1210
BpuMI	CCSGG	2 cut(s)	1206, 1605
BsaHI	GRCGYC	2 cut(s)	1398, 1404
BsaI	GGTCTC	3 cut(s)	815, 1258, 1778
BsaJI	CCNNGG	9 cut(s)	232, 563, 1533, 1617, 1922, 2142, 2410, 2411, 2425
BsaWI	WCCGGW	1 cut(s)	637
BsaXI	ACNNNNNCTCC	2 cut(s)	1566, 1596
Bsc4I	CCNNNNNNNGG	4 cut(s)	238, 539, 1473, 2405
Bse118I	RCCGGY	4 cut(s)	532, 582, 1400, 1675
Bse1I	ACTGG	9 cut(s)	134, 583, 995, 1258, 1361, 1430, 1877, 2020, 2425
Bse3DI	GCAATG	1 cut(s)	442
BseBI	CCWGG	3 cut(s)	207, 1924, 2412
BseDI	CCNNGG	9 cut(s)	232, 563, 1533, 1617, 1922, 2142, 2410, 2411, 2425
BseGI	GGATG	4 cut(s)	590, 634, 1116, 1513
BseLI	CCNNNNNNNGG	4 cut(s)	238, 539, 1473, 2405
BseMI	GCAATG	1 cut(s)	442
BseMII	CTCAG	4 cut(s)	335, 413, 1045, 1500
BseNI	ACTGG	9 cut(s)	134, 583, 995, 1258, 1361, 1430, 1877, 2020, 2425
BseRI	GAGGAG	5 cut(s)	563, 683, 803, 906, 1299
BseSI	GKGCMC	1 cut(s)	1494
BseX3I	CGGCCG	1 cut(s)	1677
BseXI	GCAGC	6 cut(s)	157, 1489, 1646, 1750, 1990, 2134
Bsh1285I	CGRYCG	1 cut(s)	1680
BsiEI	CGRYCG	1 cut(s)	1680
BsiHKAI	GWGCWC	2 cut(s)	1494, 1866
BsiSI	CCGG	7 cut(s)	533, 583, 638, 1206, 1401, 1604, 1676
BslFI	GGGAC	2 cut(s)	170, 2027
BslI	CCNNNNNNNGG	4 cut(s)	238, 539, 1473, 2405
BsmAI	GTCTC	6 cut(s)	653, 738, 815, 1135, 1258, 1778
BsmBI	CGTCTC	1 cut(s)	738
BsmFI	GGGAC	2 cut(s)	170, 2027
BsmI	GAATGC	1 cut(s)	148
Bso31I	GGTCTC	3 cut(s)	815, 1258, 1778
Bsp119I	TTCGAA	1 cut(s)	1690
Bsp1286I	GDGCHC	3 cut(s)	1494, 1866, 1923
Bsp1720I	GCTNAGC	1 cut(s)	1481
Bsp19I	CCATGG	2 cut(s)	232, 1617
BspACI	CCGC	4 cut(s)	1728, 1912, 2120, 2364
BspCNI	CTCAG	4 cut(s)	334, 414, 1044, 1499
BspHI	TCATGA	1 cut(s)	2263
BspLI	GGNNCC	3 cut(s)	314, 1452, 1722
BspMAI	CTGCAG	1 cut(s)	1768
BspMI	ACCTGC	1 cut(s)	378
BspOI	GCTAGC	1 cut(s)	1373
BspPI	GGATC	7 cut(s)	307, 320, 596, 1037, 1706, 2261, 2389
BspT104I	TTCGAA	1 cut(s)	1690
BspTNI	GGTCTC	3 cut(s)	815, 1258, 1778
BsrDI	GCAATG	1 cut(s)	442
BsrFI	RCCGGY	4 cut(s)	532, 582, 1400, 1675
BsrI	ACTGG	9 cut(s)	134, 583, 995, 1258, 1361, 1430, 1877, 2020, 2425
BssAI	RCCGGY	4 cut(s)	532, 582, 1400, 1675
BssECI	CCNNGG	9 cut(s)	232, 563, 1533, 1617, 1922, 2142, 2410, 2411, 2425
BssNAI	GTATAC	1 cut(s)	1964
BssNI	GRCGYC	2 cut(s)	1398, 1404
BssSI	CACGAG	2 cut(s)	651, 693
BssT1I	CCWWGG	4 cut(s)	232, 1533, 1617, 2142
Bst1107I	GTATAC	1 cut(s)	1964
Bst2BI	CACGAG	2 cut(s)	651, 693
Bst2UI	CCWGG	3 cut(s)	207, 1924, 2412
Bst4CI	ACNGT	5 cut(s)	184, 732, 1146, 1234, 2051
Bst6I	CTCTTC	3 cut(s)	1687, 2208, 2299
BstACI	GRCGYC	2 cut(s)	1398, 1404
BstBI	TTCGAA	1 cut(s)	1690
BstC8I	GCNNGC	5 cut(s)	584, 975, 1371, 1402, 1444
BstDEI	CTNAG	5 cut(s)	321, 422, 1031, 1481, 1486
BstDSI	CCRYGG	3 cut(s)	232, 1617, 2425
BstENI	CCTNNNNNAGG	1 cut(s)	2403
BstF5I	GGATG	4 cut(s)	590, 634, 1116, 1513
BstH2I	RGCGCY	1 cut(s)	571
BstHHI	GCGC	2 cut(s)	570, 1527
BstMAI	GTCTC	6 cut(s)	653, 738, 815, 1135, 1258, 1778
BstMCI	CGRYCG	1 cut(s)	1680
BstMWI	GCNNNNNNNGC	4 cut(s)	974, 1676, 1918, 1927
BstNI	CCWGG	3 cut(s)	207, 1924, 2412
BstNSI	RCATGY	3 cut(s)	1325, 1525, 2003
BstSCI	CCNGG	5 cut(s)	205, 1204, 1603, 1922, 2410
BstSFI	CTRYAG	3 cut(s)	571, 1275, 1764
BstSLI	GKGCMC	1 cut(s)	1494
BstV1I	GCAGC	6 cut(s)	157, 1489, 1646, 1750, 1990, 2134
BstV2I	GAAGAC	3 cut(s)	395, 420, 2130
BstX2I	RGATCY	4 cut(s)	312, 601, 1042, 1711
BstYI	RGATCY	4 cut(s)	312, 601, 1042, 1711
BstZ17I	GTATAC	1 cut(s)	1964
BstZI	CGGCCG	1 cut(s)	1677
BtgI	CCRYGG	3 cut(s)	232, 1617, 2425
BtsCI	GGATG	4 cut(s)	590, 634, 1116, 1513
BtsIMutI	CAGTG	6 cut(s)	180, 1002, 1239, 1354, 1423, 1494
BveI	ACCTGC	1 cut(s)	378
Cac8I	GCNNGC	5 cut(s)	584, 975, 1371, 1402, 1444
CaiI	CAGNNNCTG	1 cut(s)	1070
CciI	TCATGA	1 cut(s)	2263
CfoI	GCGC	2 cut(s)	570, 1527
Cfr10I	RCCGGY	4 cut(s)	532, 582, 1400, 1675
Cfr13I	GGNCC	3 cut(s)	284, 1058, 2408
CseI	GACGC	2 cut(s)	1393, 1406
Csp6I	GTAC	4 cut(s)	6, 137, 2023, 2218
CspCI	CAANNNNNGTGG	2 cut(s)	1856, 1891
CviQI	GTAC	4 cut(s)	6, 137, 2023, 2218
DdeI	CTNAG	5 cut(s)	321, 422, 1031, 1481, 1486
DraI	TTTAAA	1 cut(s)	2353
DrdI	GACNNNNNNGTC	1 cut(s)	1403
DseDI	GACNNNNNNGTC	1 cut(s)	1403
EaeI	YGGCCR	6 cut(s)	580, 1677, 2017, 2175, 2344, 2422
EagI	CGGCCG	1 cut(s)	1677
Eam1104I	CTCTTC	3 cut(s)	1687, 2208, 2299
EarI	CTCTTC	3 cut(s)	1687, 2208, 2299
Ecl136II	GAGCTC	1 cut(s)	1864
EclXI	CGGCCG	1 cut(s)	1677
Eco130I	CCWWGG	4 cut(s)	232, 1533, 1617, 2142
Eco147I	AGGCCT	1 cut(s)	556
Eco24I	GRGCYC	2 cut(s)	1866, 1923
Eco31I	GGTCTC	3 cut(s)	815, 1258, 1778
Eco52I	CGGCCG	1 cut(s)	1677
Eco53kI	GAGCTC	1 cut(s)	1864
Eco57I	CTGAAG	2 cut(s)	1974, 2388
EcoICRI	GAGCTC	1 cut(s)	1864
EcoNI	CCTNNNNNAGG	1 cut(s)	2403
EcoRI	GAATTC	1 cut(s)	2373
EcoRII	CCWGG	3 cut(s)	205, 1922, 2410
EcoT14I	CCWWGG	4 cut(s)	232, 1533, 1617, 2142
EcoT38I	GRGCYC	2 cut(s)	1866, 1923
ErhI	CCWWGG	4 cut(s)	232, 1533, 1617, 2142
Esp3I	CGTCTC	1 cut(s)	738
FalI	AAGNNNNNCTT	5 cut(s)	37, 317, 349, 2278, 2310
FaqI	GGGAC	2 cut(s)	170, 2027
FauI	CCCGC	1 cut(s)	2127
FauNDI	CATATG	2 cut(s)	1759, 2383
FbaI	TGATCA	1 cut(s)	2260
FblI	GTMKAC	1 cut(s)	1963
Fnu4HI	GCNGC	7 cut(s)	171, 1478, 1635, 1729, 1764, 2004, 2123
FokI	GGATG	4 cut(s)	577, 621, 1123, 1500
FriOI	GRGCYC	2 cut(s)	1866, 1923
FseI	GGCCGGCC	1 cut(s)	586
Fsp4HI	GCNGC	7 cut(s)	171, 1478, 1635, 1729, 1764, 2004, 2123
FspBI	CTAG	7 cut(s)	528, 1271, 1370, 1415, 1550, 2298, 2303
GlaI	GCGC	2 cut(s)	569, 1526
GluI	GCNGC	7 cut(s)	171, 1478, 1635, 1729, 1764, 2004, 2123
GsuI	CTGGAG	3 cut(s)	228, 1005, 1047
HaeII	RGCGCY	1 cut(s)	571
HapII	CCGG	7 cut(s)	533, 583, 638, 1206, 1401, 1604, 1676
HgaI	GACGC	2 cut(s)	1393, 1406
HhaI	GCGC	2 cut(s)	570, 1527
Hin1I	GRCGYC	2 cut(s)	1398, 1404
Hin6I	GCGC	2 cut(s)	568, 1525
HinP1I	GCGC	2 cut(s)	568, 1525
HincII	GTYRAC	1 cut(s)	1997
HindII	GTYRAC	1 cut(s)	1997
HindIII	AAGCTT	2 cut(s)	708, 975
HpaII	CCGG	7 cut(s)	533, 583, 638, 1206, 1401, 1604, 1676
HphI	GGTGA	1 cut(s)	2242
Hpy166II	GTNNAC	6 cut(s)	487, 1000, 1054, 1492, 1964, 1997
Hpy188I	TCNGA	8 cut(s)	145, 324, 601, 760, 784, 1720, 1834, 1855
Hpy8I	GTNNAC	6 cut(s)	487, 1000, 1054, 1492, 1964, 1997
Hpy99I	CGWCG	1 cut(s)	1400
HpyAV	CCTTC	9 cut(s)	319, 436, 693, 778, 1009, 1075, 1311, 1725, 2409
HpyCH4III	ACNGT	5 cut(s)	184, 732, 1146, 1234, 2051
HpyCH4IV	ACGT	1 cut(s)	1822
HpyCH4V	TGCA	6 cut(s)	302, 968, 1446, 1492, 1547, 1766
HpyF10VI	GCNNNNNNNGC	4 cut(s)	974, 1676, 1918, 1927
HpyF3I	CTNAG	5 cut(s)	321, 422, 1031, 1481, 1486
HpySE526I	ACGT	1 cut(s)	1822
Hsp92I	GRCGYC	2 cut(s)	1398, 1404
HspAI	GCGC	2 cut(s)	568, 1525
KroI	GCCGGC	2 cut(s)	582, 1400
KroNI	GCCGGC	2 cut(s)	584, 1402
Ksp22I	TGATCA	1 cut(s)	2260
LmnI	GCTCC	6 cut(s)	145, 209, 720, 1450, 1869, 2366
Lsp1109I	GCAGC	6 cut(s)	157, 1489, 1646, 1750, 1990, 2134
LweI	GCATC	1 cut(s)	1348
MaeI	CTAG	7 cut(s)	528, 1271, 1370, 1415, 1550, 2298, 2303
MaeII	ACGT	1 cut(s)	1822
MaeIII	GTNAC	7 cut(s)	79, 191, 220, 726, 1284, 1846, 2416
MflI	RGATCY	4 cut(s)	312, 601, 1042, 1711
MhlI	GDGCHC	3 cut(s)	1494, 1866, 1923
MlsI	TGGCCA	2 cut(s)	2019, 2346
MluNI	TGGCCA	2 cut(s)	2019, 2346
MlyI	GAGTC	2 cut(s)	996, 1429
MmeI	TCCRAC	2 cut(s)	234, 868
Mox20I	TGGCCA	2 cut(s)	2019, 2346
MreI	CGCCGGCG	1 cut(s)	1400
MroNI	GCCGGC	2 cut(s)	582, 1400
MroXI	GAANNNNTTC	1 cut(s)	846
MscI	TGGCCA	2 cut(s)	2019, 2346
MseI	TTAA	9 cut(s)	396, 675, 744, 882, 1542, 1565, 1938, 2325, 2352
Msp20I	TGGCCA	2 cut(s)	2019, 2346
MspI	CCGG	7 cut(s)	533, 583, 638, 1206, 1401, 1604, 1676
MspR9I	CCNGG	5 cut(s)	207, 1206, 1605, 1924, 2412
Mva1269I	GAATGC	1 cut(s)	148
MvaI	CCWGG	3 cut(s)	207, 1924, 2412
MwoI	GCNNNNNNNGC	4 cut(s)	974, 1676, 1918, 1927
NaeI	GCCGGC	2 cut(s)	584, 1402
NciI	CCSGG	2 cut(s)	1206, 1605
NcoI	CCATGG	2 cut(s)	232, 1617
NdeI	CATATG	2 cut(s)	1759, 2383
NgoMIV	GCCGGC	2 cut(s)	582, 1400
NheI	GCTAGC	1 cut(s)	1369
NlaIV	GGNNCC	3 cut(s)	314, 1452, 1722
NmeAIII	GCCGAG	2 cut(s)	544, 1610
NmuCI	GTSAC	3 cut(s)	191, 1284, 1846
NspI	RCATGY	3 cut(s)	1325, 1525, 2003
NspV	TTCGAA	1 cut(s)	1690
PagI	TCATGA	1 cut(s)	2263
PasI	CCCWGGG	1 cut(s)	2411
PceI	AGGCCT	1 cut(s)	556
PciI	ACATGT	1 cut(s)	1321
PcsI	WCGNNNNNNNCGW	1 cut(s)	1401
PctI	GAATGC	1 cut(s)	148
PdiI	GCCGGC	2 cut(s)	584, 1402
PdmI	GAANNNNTTC	1 cut(s)	846
PfoI	TCCNGGA	2 cut(s)	205, 1603
PkrI	GCNGC	7 cut(s)	172, 1479, 1636, 1730, 1765, 2005, 2124
PleI	GAGTC	2 cut(s)	995, 1429
PpsI	GAGTC	2 cut(s)	995, 1429
PscI	ACATGT	1 cut(s)	1321
PshBI	ATTAAT	1 cut(s)	1542
PsiI	TTATAA	1 cut(s)	926
Psp124BI	GAGCTC	1 cut(s)	1866
Psp1406I	AACGTT	1 cut(s)	1822
Psp6I	CCWGG	3 cut(s)	205, 1922, 2410
PspGI	CCWGG	3 cut(s)	205, 1922, 2410
PspN4I	GGNNCC	3 cut(s)	314, 1452, 1722
PspPI	GGNCC	3 cut(s)	284, 1058, 2408
PsrI	GAACNNNNNNTAC	4 cut(s)	42, 74, 2163, 2195
PstI	CTGCAG	1 cut(s)	1768
PstNI	CAGNNNCTG	1 cut(s)	1070
PsuI	RGATCY	4 cut(s)	312, 601, 1042, 1711
RigI	GGCCGGCC	1 cut(s)	586
RsaI	GTAC	4 cut(s)	7, 138, 2024, 2219
RsaNI	GTAC	4 cut(s)	6, 137, 2023, 2218
SacI	GAGCTC	1 cut(s)	1866
SaqAI	TTAA	9 cut(s)	396, 675, 744, 882, 1542, 1565, 1938, 2325, 2352
SatI	GCNGC	7 cut(s)	171, 1478, 1635, 1729, 1764, 2004, 2123
Sau96I	GGNCC	3 cut(s)	284, 1058, 2408
ScaI	AGTACT	1 cut(s)	2219
SchI	GAGTC	2 cut(s)	996, 1429
ScrFI	CCNGG	5 cut(s)	207, 1206, 1605, 1924, 2412
SduI	GDGCHC	3 cut(s)	1494, 1866, 1923
SfaNI	GCATC	1 cut(s)	1348
SfcI	CTRYAG	3 cut(s)	571, 1275, 1764
SfuI	TTCGAA	1 cut(s)	1690
SgrAI	CRCCGGYG	1 cut(s)	1400
SmlI	CTYRAG	1 cut(s)	1225
SmoI	CTYRAG	1 cut(s)	1225
SseBI	AGGCCT	1 cut(s)	556
SsiI	CCGC	4 cut(s)	1728, 1912, 2120, 2364
SspI	AATATT	1 cut(s)	54
SspMI	CTAG	7 cut(s)	528, 1271, 1370, 1415, 1550, 2298, 2303
SstI	GAGCTC	1 cut(s)	1866
StuI	AGGCCT	1 cut(s)	556
StyD4I	CCNGG	5 cut(s)	205, 1204, 1603, 1922, 2410
StyI	CCWWGG	4 cut(s)	232, 1533, 1617, 2142
TaaI	ACNGT	5 cut(s)	184, 732, 1146, 1234, 2051
TaiI	ACGT	1 cut(s)	1825
TaqI	TCGA	6 cut(s)	276, 343, 406, 624, 1587, 1690
TatI	WGTACW	1 cut(s)	2217
TauI	GCSGC	1 cut(s)	1731
Tru1I	TTAA	9 cut(s)	396, 675, 744, 882, 1542, 1565, 1938, 2325, 2352
Tru9I	TTAA	9 cut(s)	396, 675, 744, 882, 1542, 1565, 1938, 2325, 2352
TscAI	CASTG	6 cut(s)	187, 1002, 1239, 1361, 1430, 1494
TseFI	GTSAC	3 cut(s)	191, 1284, 1846
TseI	GCWGC	6 cut(s)	170, 1477, 1634, 1763, 2003, 2122
Tsp45I	GTSAC	3 cut(s)	191, 1284, 1846
TspDTI	ATGAA	8 cut(s)	426, 884, 1208, 1293, 1502, 2226, 2280, 2400
TspGWI	ACGGA	2 cut(s)	626, 835
TspRI	CASTG	6 cut(s)	187, 1002, 1239, 1361, 1430, 1494
VneI	GTGCAC	1 cut(s)	1490
VspI	ATTAAT	1 cut(s)	1542
XagI	CCTNNNNNAGG	1 cut(s)	2403
XapI	RAATTY	4 cut(s)	1019, 1840, 2268, 2373
XbaI	TCTAGA	1 cut(s)	2297
XceI	RCATGY	3 cut(s)	1325, 1525, 2003
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2027, 2170
XmiI	GTMKAC	1 cut(s)	1963
XmnI	GAANNNNTTC	1 cut(s)	846
XspI	CTAG	7 cut(s)	528, 1271, 1370, 1415, 1550, 2298, 2303
ZrmI	AGTACT	1 cut(s)	2219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.