Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0011083

Physical Location & Seq

Genomic Coordinates Forward (+)

13028123 .. 13032665

Gene Structure 4543 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1164900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGACTAACACGAGAGACGAACCAGGTGGAAGCGGCAGCGGAGGCGGCGGTGGCGGATTTCATAGAGTGCAAGCAGAGCGTGACCTAGAATCCAATTGGGAACTCGATCTCGCACAGAAACTCGAAGAATATTTACTCAAAATTTGCTCCGGTGAAATACCCACCGAAGCAGAAGGCCATGTCGCTATTAATTTCGCCGAAGCTGCGCTGCTGCTTCAAGGTTCGGTCCAAGTGTATAGCCGGAAGGTGGAGTATCTGTACTCGTTGGTTTTGCGTGCCTTGGAGTTCCTTACCCAGAAAGGGCAGCATGAACAATCTGAAAGAACATCTATTCGGCCTGAAGAAGGTGGGAGTTCCCATGCTGCTTCTGATGAAGAAAATGATATCTTTTGGGGCTTAGATGACATTGCAGTTGAAACAAAGAATTGCTTAGATAGTCCATTGGGCAGAGATGCTCCTCTGAATCCCTTTGTGAAGCCCCCAGCAAATCTAGTTGTACTCGAAGGTGATTGCCTAGATACTACTGGTGATTTCGGAGAATTAGAGTCATATCTGCTTGCCACCAACAATCTATACCAGGATTTCATTTTATTAGATCCATGTGATACAGTAGCAGTAAATGATTATTTGTATGTGGATGGAGTTGGTAAAGGACCAAATAGTGCTTATAGGGTCACCTCAGAACGAAAAAGTCATCAGACTCCCAGACGTTCAGGTGGAACTGCATGTAGGTCATCTCTCCATAAGGGGAAGGATCCTAATATGATTCAATCTCCTATCGCCGGTTGCAGTTTTGAGGCAAACAATTGTAATATTAGGCTTGATCCTCCTGCCTGCAATGATTTTGGCGATGGTACTCAGGGATTTGATATTGATGATAGATATTCAGAGCCCGGGGACTTGGATGATTCCGATGATGATGATGATGATCCATGGAAGCCACTGAATCCCCATGAACCTGGGAATTTGAAAGTGAAACCTTTTCGGAAAGTCAAAGCTTCTAAAAGGAAAGGTTTCAATTGTACTAAGCTGGCCTCTATTATTACACTGTTTCCACCTGCAAAATTGTACGGTACTATTAGTCCAGAGCTCACAGAAATGTGGGAGATTCGACGCCATGCCGAGGAAAGACAAAAGGGGTCCCAATCTCCTCCATTATTTGAAAAGCTACGGGTATCACTTGTTAAAGGAAGACAAGAATCCTTTGATGCCTTTAGCAATCCTATGGATGGAAATGAGGATACTGAATATGATAACGAGATCCCTGATTTTGGGCAAACAGATGCTGACTTGCCAGAATTCATGGATGATGTAACTCGTCACAATGATTTGAATGAGGACGGTGGTCCTCACTTTGGTAATGATGAACCATTTGATGACGATCCAAATCCTCATGCAAGCCTGGAAGATTTGTGTCGCTCTCACTTGGACGCTCTCCTTGCTAGCATAGCTGAAACCGAGAAACAAACTGAACTAGCTGCTCGTGTTTCAACATGGAAACACAAAATTGAGTACAACTTGGAAGAGCAAGAATCACACCCTGCTTTTGATATTCATGACTATGGAGAAAGAATTCTTGATAGACTATCCTTTGAACCAGACAATGAGAATGTGTTGTCATTTGCTGATGTTGTAAAAGGTCAGCAAAAATATGATGTCGCTCGGAGTTTTTCTGCGCTTTTGCAACTGGTGAACAATGGAGATGTTGAGTTGGATAGGAGTGGGGTTGCTGGTGAGTCCTTTTGTTACACAGCTGTGAATCCCTTTCATGTTTGGCTCCTTAGGCATGACAAGAAAAGAGAGGAGACTGGATTTCGGTTGTCAGGAAAGAGAGTTCAGTCTCCCTTGAGGAAAGCATCTCGAAAAGTGGACAACGGAAACACTGAGACTGATAAATCTTCCTCGGTCAAGTCTTCTTCTAAGGCACATAAATCAACAGGGACATCTCTTATAAATGGCAAGTTACCTATGAAAGTTGGAAACGTTGGTGGCAAACGATGCACTCCTGAAGCCAAGAGGAGAAGAAAGTCTCGATTTGTTGAACCAGTTAGCCTACATTCTGCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000793 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006282 GO:0008150 GO:0009893 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045739 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0080134 GO:0080135 GO:2001020 GO:2001022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CNDH2_C CNDH2_M CNDH2_N

Protein Analysis

690

Amino Acids

76.46

Weight (kDa)

4.97

Isoelectric Point (pI)

46.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CNDH2_N	PF06278	21 - 136	8.1e-40	Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNDH2_M	PF16869	159 - 308	1.6e-22	Condensin II complex subunit CAP-H2 or CNDH2, mid domain
CNDH2_C	PF16858	467 - 602	6.9e-42	Condensin II complex subunit CAP-H2 or CNDH2, C-terminal wHTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16730
fragaria_vesca	FvH4_4g18640 FvH4_4g18640 FvH4_4g18640
malus_domestica	MD13G1164900.v1.1 MD16G1164600.v1.1
prunus_persica	Prupe.1G123900_v2.0.a1
pyrus_communis	pycom13g14100 pycom16g13930
rosa_chinensis	RchiOBHm_Chr4g0423341
rosa_laevigata	RLG00000007567
rosa_multiflora	Rmu_sc0001290.1_g000016
rosa_roxburghii	Rroxscaffold_5G00365530
rosa_rugosa	Rorug04G0186700.1 Rorug04G0186800
rosa_samantha	Rh4AG245900 Rh4BG251300 Rh4CG259700 Rh4DG246200
rosa_wichuraiana	Rw4G021130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1952
AarI	CACCTGC	1 cut(s)	1066
Acc36I	ACCTGC	2 cut(s)	1066, 2054
AciI	CCGC	5 cut(s)	33, 39, 45, 48, 54
AclI	AACGTT	1 cut(s)	1983
AclWI	GGATC	7 cut(s)	590, 749, 762, 818, 923, 1255, 1376
AcsI	RAATTY	4 cut(s)	141, 964, 1298, 1572
AcuI	CTGAAG	2 cut(s)	360, 2028
AcyI	GRCGYC	1 cut(s)	1114
AfaI	GTAC	7 cut(s)	260, 498, 856, 1024, 1070, 1075, 1514
AfiI	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1123, 1229, 1271, 1355
AjnI	CCWGG	4 cut(s)	22, 576, 958, 1401
AleI	CACNNNNGTG	1 cut(s)	1754
AloI	GAACNNNNNNTCC	2 cut(s)	1818, 1850
AluBI	AGCT	8 cut(s)	203, 998, 1030, 1090, 1168, 1451, 1478, 1754
AluI	AGCT	8 cut(s)	203, 998, 1030, 1090, 1168, 1451, 1478, 1754
Alw21I	GWGCWC	1 cut(s)	1092
Alw26I	GTCTC	5 cut(s)	9, 1799, 1845, 1880, 2034
AlwI	GGATC	7 cut(s)	590, 749, 762, 818, 923, 1255, 1376
AlwNI	CAGNNNCTG	1 cut(s)	1286
Ama87I	CYCGRG	1 cut(s)	893
AoxI	GGCC	3 cut(s)	175, 335, 1032
ApeKI	GCWGC	7 cut(s)	36, 203, 208, 211, 304, 362, 1478
ApoI	RAATTY	4 cut(s)	141, 964, 1298, 1572
AseI	ATTAAT	1 cut(s)	189
Asp700I	GAANNNNTTC	2 cut(s)	1013, 1572
AspLEI	GCGC	2 cut(s)	208, 1678
AspS9I	GGNCC	4 cut(s)	226, 653, 1140, 1346
AsuC2I	CCSGG	2 cut(s)	894, 895
AsuHPI	GGTGA	6 cut(s)	164, 518, 539, 667, 1702, 1745
AsuNHI	GCTAGC	1 cut(s)	1442
AvaI	CYCGRG	1 cut(s)	893
AvaII	GGWCC	4 cut(s)	226, 653, 1140, 1346
AxyI	CCTNAGG	1 cut(s)	1781
BamHI	GGATCC	1 cut(s)	754
BanII	GRGCYC	2 cut(s)	894, 1092
BarI	GAAGNNNNNNTAC	2 cut(s)	117, 149
BauI	CACGAG	2 cut(s)	10, 1482
BbsI	GAAGAC	2 cut(s)	1198, 1905
Bbv12I	GWGCWC	1 cut(s)	1092
BbvI	GCAGC	7 cut(s)	48, 190, 195, 198, 316, 349, 1465
BccI	CCATC	3 cut(s)	632, 845, 1223
BciT130I	CCWGG	4 cut(s)	24, 578, 960, 1403
BciVI	GTATCC	1 cut(s)	1234
BcnI	CCSGG	2 cut(s)	894, 895
BcoDI	GTCTC	5 cut(s)	9, 1799, 1845, 1880, 2034
BfaI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
BfmI	CTRYAG	1 cut(s)	2061
BfuAI	ACCTGC	2 cut(s)	1066, 2054
BfuI	GTATCC	1 cut(s)	1234
BisI	GCNGC	9 cut(s)	34, 37, 46, 204, 209, 212, 305, 363, 1479
BlsI	GCNGC	9 cut(s)	35, 38, 47, 205, 210, 213, 306, 364, 1480
Bme1390I	CCNGG	6 cut(s)	24, 578, 894, 895, 960, 1403
Bme18I	GGWCC	4 cut(s)	226, 653, 1140, 1346
BmeT110I	CYCGRG	1 cut(s)	893
BmgT120I	GGNCC	4 cut(s)	226, 653, 1140, 1346
BmiI	GGNNCC	4 cut(s)	756, 1141, 1142, 1778
BmrFI	CCNGG	6 cut(s)	24, 578, 894, 895, 960, 1403
BmsI	GCATC	5 cut(s)	442, 1198, 1273, 1865, 1988
BmtI	GCTAGC	1 cut(s)	1446
BoxI	GACNNNNGTC	1 cut(s)	1344
BpiI	GAAGAC	2 cut(s)	1198, 1905
BpuEI	CTTGAG	1 cut(s)	1867
BpuMI	CCSGG	2 cut(s)	894, 895
BsaBI	GATNNNNATC	3 cut(s)	927, 1380, 1386
BsaHI	GRCGYC	1 cut(s)	1114
BsaJI	CCNNGG	7 cut(s)	279, 893, 894, 932, 959, 1122, 1902
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	2 cut(s)	242, 272
Bsc4I	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1123, 1229, 1271, 1355
Bse118I	RCCGGY	1 cut(s)	782
Bse1I	ACTGG	4 cut(s)	529, 1692, 1813, 2045
Bse21I	CCTNAGG	1 cut(s)	1781
Bse3DI	GCAATG	2 cut(s)	405, 844
Bse8I	GATNNNNATC	3 cut(s)	927, 1380, 1386
BseBI	CCWGG	4 cut(s)	24, 578, 960, 1403
BseDI	CCNNGG	7 cut(s)	279, 893, 894, 932, 959, 1122, 1902
BseGI	GGATG	4 cut(s)	643, 910, 1234, 1312
BseJI	GATNNNNATC	3 cut(s)	927, 1380, 1386
BseLI	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1123, 1229, 1271, 1355
BseMI	GCAATG	2 cut(s)	405, 844
BseMII	CTCAG	3 cut(s)	693, 872, 1875
BseNI	ACTGG	4 cut(s)	529, 1692, 1813, 2045
BseRI	GAGGAG	4 cut(s)	447, 1140, 1817, 2032
BseXI	GCAGC	7 cut(s)	48, 190, 195, 198, 316, 349, 1465
BseYI	CCCAGC	1 cut(s)	481
BshFI	GGCC	3 cut(s)	177, 337, 1034
BsiHKAI	GWGCWC	1 cut(s)	1092
BsiHKCI	CYCGRG	1 cut(s)	893
BsiSI	CCGG	4 cut(s)	150, 241, 783, 894
BslFI	GGGAC	3 cut(s)	911, 1126, 1954
BslI	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1123, 1229, 1271, 1355
BsmAI	GTCTC	5 cut(s)	9, 1799, 1845, 1880, 2034
BsmBI	CGTCTC	1 cut(s)	9
BsmFI	GGGAC	3 cut(s)	911, 1126, 1954
BsnI	GGCC	3 cut(s)	177, 337, 1034
BsoBI	CYCGRG	1 cut(s)	893
Bsp1286I	GDGCHC	2 cut(s)	894, 1092
Bsp143I	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
Bsp19I	CCATGG	1 cut(s)	932
BspACI	CCGC	5 cut(s)	33, 39, 45, 48, 54
BspANI	GGCC	3 cut(s)	177, 337, 1034
BspCNI	CTCAG	3 cut(s)	692, 871, 1876
BspHI	TCATGA	1 cut(s)	1555
BspLI	GGNNCC	4 cut(s)	756, 1141, 1142, 1778
BspMAI	CTGCAG	1 cut(s)	2065
BspMI	ACCTGC	2 cut(s)	1066, 2054
BspOI	GCTAGC	1 cut(s)	1446
BspPI	GGATC	7 cut(s)	590, 749, 762, 818, 923, 1255, 1376
BspQI	GCTCTTC	1 cut(s)	1518
BsrDI	GCAATG	2 cut(s)	405, 844
BsrFI	RCCGGY	1 cut(s)	782
BsrI	ACTGG	4 cut(s)	529, 1692, 1813, 2045
BssAI	RCCGGY	1 cut(s)	782
BssECI	CCNNGG	7 cut(s)	279, 893, 894, 932, 959, 1122, 1902
BssMI	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
BssNI	GRCGYC	1 cut(s)	1114
BssSI	CACGAG	2 cut(s)	10, 1482
BssT1I	CCWWGG	2 cut(s)	279, 932
Bst2BI	CACGAG	2 cut(s)	10, 1482
Bst2UI	CCWGG	4 cut(s)	24, 578, 960, 1403
Bst4CI	ACNGT	4 cut(s)	610, 1050, 1073, 1343
Bst6I	CTCTTC	1 cut(s)	1518
BstACI	GRCGYC	1 cut(s)	1114
BstAPI	GCANNNNNTGC	1 cut(s)	1998
BstC8I	GCNNGC	7 cut(s)	72, 276, 558, 835, 1032, 1399, 1444
BstDEI	CTNAG	8 cut(s)	397, 430, 679, 858, 1026, 1781, 1884, 1920
BstDSI	CCRYGG	1 cut(s)	932
BstEII	GGTNACC	1 cut(s)	673
BstENI	CCTNNNNNAGG	1 cut(s)	342
BstF5I	GGATG	4 cut(s)	643, 910, 1234, 1312
BstHHI	GCGC	2 cut(s)	208, 1678
BstKTI	GATC	7 cut(s)	109, 598, 757, 826, 931, 1263, 1384
BstMAI	GTCTC	5 cut(s)	9, 1799, 1845, 1880, 2034
BstMBI	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
BstMWI	GCNNNNNNNGC	9 cut(s)	42, 45, 51, 76, 203, 1439, 1448, 1783, 1998
BstNI	CCWGG	4 cut(s)	24, 578, 960, 1403
BstNSI	RCATGY	1 cut(s)	729
BstPAI	GACNNNNGTC	1 cut(s)	1344
BstPI	GGTNACC	1 cut(s)	673
BstSCI	CCNGG	6 cut(s)	22, 576, 892, 893, 958, 1401
BstSFI	CTRYAG	1 cut(s)	2061
BstV1I	GCAGC	7 cut(s)	48, 190, 195, 198, 316, 349, 1465
BstV2I	GAAGAC	2 cut(s)	1198, 1905
BstX2I	RGATCY	3 cut(s)	595, 754, 1260
BstXI	CCANNNNNNTGG	1 cut(s)	959
BstYI	RGATCY	3 cut(s)	595, 754, 1260
Bsu36I	CCTNAGG	1 cut(s)	1781
BsuI	GTATCC	1 cut(s)	1234
BsuRI	GGCC	3 cut(s)	177, 337, 1034
BtgI	CCRYGG	1 cut(s)	932
BtgZI	GCGATG	1 cut(s)	864
BtsCI	GGATG	4 cut(s)	643, 910, 1234, 1312
BtsIMutI	CAGTG	3 cut(s)	941, 1046, 1881
BveI	ACCTGC	2 cut(s)	1066, 2054
Cac8I	GCNNGC	7 cut(s)	72, 276, 558, 835, 1032, 1399, 1444
CaiI	CAGNNNCTG	1 cut(s)	1286
CciI	TCATGA	1 cut(s)	1555
CfoI	GCGC	2 cut(s)	208, 1678
Cfr10I	RCCGGY	1 cut(s)	782
Cfr13I	GGNCC	4 cut(s)	226, 653, 1140, 1346
Cfr9I	CCCGGG	1 cut(s)	893
CseI	GACGC	2 cut(s)	1122, 1439
CsiI	ACCWGGT	1 cut(s)	22
Csp6I	GTAC	7 cut(s)	259, 497, 855, 1023, 1069, 1074, 1513
CviQI	GTAC	7 cut(s)	259, 497, 855, 1023, 1069, 1074, 1513
DdeI	CTNAG	8 cut(s)	397, 430, 679, 858, 1026, 1781, 1884, 1920
DpnI	GATC	7 cut(s)	108, 597, 756, 825, 930, 1262, 1383
DpnII	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
Eam1104I	CTCTTC	1 cut(s)	1518
EarI	CTCTTC	1 cut(s)	1518
EciI	GGCGGA	1 cut(s)	69
Ecl136II	GAGCTC	1 cut(s)	1090
Eco130I	CCWWGG	2 cut(s)	279, 932
Eco24I	GRGCYC	2 cut(s)	894, 1092
Eco32I	GATATC	1 cut(s)	385
Eco47I	GGWCC	4 cut(s)	226, 653, 1140, 1346
Eco53kI	GAGCTC	1 cut(s)	1090
Eco57I	CTGAAG	2 cut(s)	360, 2028
Eco81I	CCTNAGG	1 cut(s)	1781
Eco88I	CYCGRG	1 cut(s)	893
Eco91I	GGTNACC	1 cut(s)	673
EcoICRI	GAGCTC	1 cut(s)	1090
EcoNI	CCTNNNNNAGG	1 cut(s)	342
EcoO109I	RGGNCCY	1 cut(s)	1140
EcoO65I	GGTNACC	1 cut(s)	673
EcoRI	GAATTC	2 cut(s)	1298, 1572
EcoRII	CCWGG	4 cut(s)	22, 576, 958, 1401
EcoRV	GATATC	1 cut(s)	385
EcoT14I	CCWWGG	2 cut(s)	279, 932
EcoT38I	GRGCYC	2 cut(s)	894, 1092
ErhI	CCWWGG	2 cut(s)	279, 932
Esp3I	CGTCTC	1 cut(s)	9
FalI	AAGNNNNNCTT	2 cut(s)	413, 445
FaqI	GGGAC	3 cut(s)	911, 1126, 1954
Fnu4HI	GCNGC	9 cut(s)	34, 37, 46, 204, 209, 212, 305, 363, 1479
FokI	GGATG	4 cut(s)	650, 917, 1241, 1319
FriOI	GRGCYC	2 cut(s)	894, 1092
Fsp4HI	GCNGC	9 cut(s)	34, 37, 46, 204, 209, 212, 305, 363, 1479
FspBI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
GlaI	GCGC	2 cut(s)	207, 1677
GluI	GCNGC	9 cut(s)	34, 37, 46, 204, 209, 212, 305, 363, 1479
GsaI	CCCAGC	1 cut(s)	485
HaeIII	GGCC	3 cut(s)	177, 337, 1034
HapII	CCGG	4 cut(s)	150, 241, 783, 894
HgaI	GACGC	2 cut(s)	1122, 1439
HhaI	GCGC	2 cut(s)	208, 1678
Hin1I	GRCGYC	1 cut(s)	1114
Hin6I	GCGC	2 cut(s)	206, 1676
HinP1I	GCGC	2 cut(s)	206, 1676
HindIII	AAGCTT	1 cut(s)	996
HpaII	CCGG	4 cut(s)	150, 241, 783, 894
HphI	GGTGA	6 cut(s)	164, 518, 539, 667, 1702, 1745
Hpy166II	GTNNAC	2 cut(s)	1693, 1870
Hpy188III	TCNNGA	7 cut(s)	1085, 1556, 1577, 1824, 1860, 2006, 2031
Hpy8I	GTNNAC	2 cut(s)	1693, 1870
Hpy99I	CGWCG	1 cut(s)	1116
HpyAV	CCTTC	5 cut(s)	167, 238, 338, 497, 745
HpyCH4III	ACNGT	4 cut(s)	610, 1050, 1073, 1343
HpyCH4IV	ACGT	2 cut(s)	709, 1983
HpyF10VI	GCNNNNNNNGC	9 cut(s)	42, 45, 51, 76, 203, 1439, 1448, 1783, 1998
HpyF3I	CTNAG	8 cut(s)	397, 430, 679, 858, 1026, 1781, 1884, 1920
HpySE526I	ACGT	2 cut(s)	709, 1983
Hsp92I	GRCGYC	1 cut(s)	1114
HspAI	GCGC	2 cut(s)	206, 1676
KflI	GGGWCCC	1 cut(s)	1140
Kzo9I	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
LguI	GCTCTTC	1 cut(s)	1518
LmnI	GCTCC	3 cut(s)	152, 460, 1782
Lsp1109I	GCAGC	7 cut(s)	48, 190, 195, 198, 316, 349, 1465
LweI	GCATC	5 cut(s)	442, 1198, 1273, 1865, 1988
MabI	ACCWGGT	1 cut(s)	22
MaeI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
MaeII	ACGT	2 cut(s)	709, 1983
MaeIII	GTNAC	6 cut(s)	80, 673, 1312, 1319, 1745, 1962
MalI	GATC	7 cut(s)	108, 597, 756, 825, 930, 1262, 1383
MboI	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
MfeI	CAATTG	3 cut(s)	94, 805, 1018
MflI	RGATCY	3 cut(s)	595, 754, 1260
MhlI	GDGCHC	2 cut(s)	894, 1092
MlyI	GAGTC	3 cut(s)	554, 694, 1745
MmeI	TCCRAC	2 cut(s)	1692, 1957
MroXI	GAANNNNTTC	2 cut(s)	1013, 1572
MseI	TTAA	2 cut(s)	189, 1185
MslI	CAYNNNNRTG	3 cut(s)	1097, 1560, 1754
MspA1I	CMGCKG	2 cut(s)	39, 1754
MspI	CCGG	4 cut(s)	150, 241, 783, 894
MspR9I	CCNGG	6 cut(s)	24, 578, 894, 895, 960, 1403
MunI	CAATTG	3 cut(s)	94, 805, 1018
MvaI	CCWGG	4 cut(s)	24, 578, 960, 1403
MwoI	GCNNNNNNNGC	9 cut(s)	42, 45, 51, 76, 203, 1439, 1448, 1783, 1998
NciI	CCSGG	2 cut(s)	894, 895
NcoI	CCATGG	1 cut(s)	932
NdeII	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
NheI	GCTAGC	1 cut(s)	1442
NlaIV	GGNNCC	4 cut(s)	756, 1141, 1142, 1778
NmeAIII	GCCGAG	1 cut(s)	1147
NmuCI	GTSAC	3 cut(s)	80, 673, 1319
NspI	RCATGY	1 cut(s)	729
OliI	CACNNNNGTG	1 cut(s)	1754
PagI	TCATGA	1 cut(s)	1555
PaqCI	CACCTGC	1 cut(s)	1066
PciSI	GCTCTTC	1 cut(s)	1518
PdmI	GAANNNNTTC	2 cut(s)	1013, 1572
PfeI	GAWTC	9 cut(s)	89, 463, 766, 908, 946, 1108, 1199, 1532, 1759
PkrI	GCNGC	9 cut(s)	35, 38, 47, 205, 210, 213, 306, 364, 1480
PleI	GAGTC	3 cut(s)	553, 694, 1744
PpsI	GAGTC	3 cut(s)	553, 694, 1744
PpuMI	RGGWCCY	1 cut(s)	1140
PshAI	GACNNNNGTC	1 cut(s)	1344
PshBI	ATTAAT	1 cut(s)	189
PsiI	TTATAA	1 cut(s)	1952
Psp124BI	GAGCTC	1 cut(s)	1092
Psp1406I	AACGTT	1 cut(s)	1983
Psp5II	RGGWCCY	1 cut(s)	1140
Psp6I	CCWGG	4 cut(s)	22, 576, 958, 1401
PspEI	GGTNACC	1 cut(s)	673
PspFI	CCCAGC	1 cut(s)	481
PspGI	CCWGG	4 cut(s)	22, 576, 958, 1401
PspN4I	GGNNCC	4 cut(s)	756, 1141, 1142, 1778
PspPI	GGNCC	4 cut(s)	226, 653, 1140, 1346
PspPPI	RGGWCCY	1 cut(s)	1140
PstI	CTGCAG	1 cut(s)	2065
PstNI	CAGNNNCTG	1 cut(s)	1286
PsuI	RGATCY	3 cut(s)	595, 754, 1260
PvuII	CAGCTG	1 cut(s)	1754
RsaI	GTAC	7 cut(s)	260, 498, 856, 1024, 1070, 1075, 1514
RsaNI	GTAC	7 cut(s)	259, 497, 855, 1023, 1069, 1074, 1513
RseI	CAYNNNNRTG	3 cut(s)	1097, 1560, 1754
SacI	GAGCTC	1 cut(s)	1092
SapI	GCTCTTC	1 cut(s)	1518
SaqAI	TTAA	2 cut(s)	189, 1185
SatI	GCNGC	9 cut(s)	34, 37, 46, 204, 209, 212, 305, 363, 1479
Sau3AI	GATC	7 cut(s)	106, 595, 754, 823, 928, 1260, 1381
Sau96I	GGNCC	4 cut(s)	226, 653, 1140, 1346
SchI	GAGTC	3 cut(s)	554, 694, 1745
ScrFI	CCNGG	6 cut(s)	24, 578, 894, 895, 960, 1403
SduI	GDGCHC	2 cut(s)	894, 1092
SexAI	ACCWGGT	1 cut(s)	22
SfaNI	GCATC	5 cut(s)	442, 1198, 1273, 1865, 1988
SfcI	CTRYAG	1 cut(s)	2061
SinI	GGWCC	4 cut(s)	226, 653, 1140, 1346
SmaI	CCCGGG	1 cut(s)	895
SmiMI	CAYNNNNRTG	3 cut(s)	1097, 1560, 1754
SmlI	CTYRAG	1 cut(s)	1846
SmoI	CTYRAG	1 cut(s)	1846
SsiI	CCGC	5 cut(s)	33, 39, 45, 48, 54
SspI	AATATT	2 cut(s)	131, 814
SspMI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
SstI	GAGCTC	1 cut(s)	1092
StyD4I	CCNGG	6 cut(s)	22, 576, 892, 893, 958, 1401
StyI	CCWWGG	2 cut(s)	279, 932
TaaI	ACNGT	4 cut(s)	610, 1050, 1073, 1343
TaiI	ACGT	2 cut(s)	712, 1986
TaqI	TCGA	6 cut(s)	105, 123, 501, 1111, 1861, 2032
TaqII	GACCGA	2 cut(s)	214, 1894
TatI	WGTACW	4 cut(s)	258, 496, 1022, 1512
TauI	GCSGC	2 cut(s)	36, 48
TfiI	GAWTC	9 cut(s)	89, 463, 766, 908, 946, 1108, 1199, 1532, 1759
Tru1I	TTAA	2 cut(s)	189, 1185
Tru9I	TTAA	2 cut(s)	189, 1185
TscAI	CASTG	3 cut(s)	948, 1053, 1888
TseFI	GTSAC	3 cut(s)	80, 673, 1319
TseI	GCWGC	7 cut(s)	36, 203, 208, 211, 304, 362, 1478
Tsp45I	GTSAC	3 cut(s)	80, 673, 1319
TspGWI	ACGGA	1 cut(s)	1890
TspMI	CCCGGG	1 cut(s)	893
TspRI	CASTG	3 cut(s)	948, 1053, 1888
VpaK11BI	GGWCC	4 cut(s)	226, 653, 1140, 1346
VspI	ATTAAT	1 cut(s)	189
XagI	CCTNNNNNAGG	1 cut(s)	342
XapI	RAATTY	4 cut(s)	141, 964, 1298, 1572
XceI	RCATGY	1 cut(s)	729
XmaI	CCCGGG	1 cut(s)	893
XmnI	GAANNNNTTC	2 cut(s)	1013, 1572
XspI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.