Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0011083

Physical Location & Seq

Genomic Coordinates Reverse (-)

47107750 .. 47112759

Gene Structure 5010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00365530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGACTAACTCCAGAGCGGAGCCAAGCGGCAGTGGTGGCTGCGCCGGAGGTGGGTTCCACACGGTGCAGGCGGAGCGTGACCTAGAATCCAATTGGGAACTAGATCTTGGAACAAAACTCGAAGAGTATTTGCTGAGGATTTGCTCCGGCGAATTGCCCGCCGAAGCTGACGGCATTGTGTCTATTAATTTCGCCGAAGCTGCTCTGCTACTTCAGGGTTCGGTTCAGGTGTATAGCCGGAAGGTGGAATATCTTTACTCGTTGGTCTTGCGTGCTTTGGAGTTTCTTTCCCAAAAAAGCAGGCAGAATGACCAATCAGACGGCACATCAGTTCAACCTGAAGAAGGTGGGAGTTCCAATGCGGTTGCTGATGAAGAAAATGATAGGTTTTGGGGTTTAGATGACATTGCAGTGGAAGCAAAAAATTGCTTAGATAGTCCTTCAGGCAGAGATGTTCCTTTGAATCCCTTTGTGAAGCCCCCAGCAAATCTAGTTGTCCTTGAAGGTGATTGCTTAGATACAACTGGTGATTCCGGAGAACTAGAGTCATATCTGTTGGCCACAAATGATCTTTACCAGGATTTCATTTTGTTAGATCCATGTGATGCAGTAGCAGTTAATGATTATTTGGGTGCGGATGGAGTTAGTAGAGGACAAAGTAGTGCTTATAGGGTCAGCTCAACTCGAAAAAGCTTTCTGTCTCCCACAGGACGTTCAGGAGGGACTGCACATAAGTCACAAAAGTCCCAGAATGCTAATGTCAATCAGTCTCCTATGGTTGATTCTCACTTTGAGGTCAATGGTTGTAATATTGGGCCTGATCCTCCTGGCTGCAATAATTTTGATGACGGCACTCATGGGTATGATATGGATGATAGATACTCGGAGCCTGGGGACTTGAATGAATTGGATGATGACGATGATGATCCTTGGAAGCCTTTGAATCCACATGAACCTGGGAATTTAAAAGTAAAGCCTTTTAAAAAAGTCAAAGCTTTTAAAAGGAACTGGGCTAAATCTTCTAAGCAGGCATCTATGGCAACAATGTTTCCACCTGCAAAATTGTATGGTACCATTAGTCCAGAACTCACAGAAATGTGGGAGATACGACGTCATGCTCAAGAACAGCAAAGGGGGTCCCAATCTCCTCCATTATTTGAGAAGCTGCGACAATCACTTATTGATGGAAAACATGAAAATTTTGATGGCTCTTCTAATCCTATGAATGGAAATGACGACGCCGAATCTGATAATGACATCCCGGGTTTTGGGCAACCAGATGCTGACATACCAGAAGATGTACCTCTTCACAATGATGAGCACGAGGATGGTGGTCCTCATTTTGGCACCGATGAAGCTTTTGGATATGAAGATCCAAACCCTCATGCAAGCTTGGAAGATTTATGCCGTTCTCACCTTGATGCTCTACTTGCTAGCATAGCTGAAAATGAGAAGCAAACTGAACTGGCTGCTCGTGTTTCAACATGGAAACAGAAAATTGAGCACAACTTGGAAGAGCAAGAATCACACCCTCCTTTTGACATTCAAGACTATGGCGAAAGAATTCTTGATAGACTATCCCTTGAACCAGAAGATAGAAATGTATTGCCCTTTTCTGATGTCGTCAAAGGTCAGGGAAAGTATGATGTGGCCAGGAGCTTTTCTGCACTACTGCAACTGGTAAACAATGGAAATGTTGAGTTGGATAGGAGTTTAGTTGATGGCGGTCAGCCTGTTTGTTTCACAGCTGCCAATCCTTTCCATGTTCGGCTCCTAAGACATGACAGAAGAAGAGTGGAAACTGGATTTCGGCTGTCGAGAAAGAGAGTTAAGTCTCCGTTGAGAAAAGCGTGTAGAAAAGTGGACAACGACAAGAATGGAATTGAGAAATCACCCTTCGTCAAGTCATCATCAAAGACAAGTAAATCAAAAAGATCTACTCCAACAAACTGCAAGTTGTCAGCCGGAAAGAATGGCGTCACAGGGCGCAGTCCTGATGCCAAGAGGAGAAAAAGTACTCGATTTGTTGAACCACTTGATGACCTACATTCTCCAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000793 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006282 GO:0008150 GO:0009893 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045739 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0080134 GO:0080135 GO:2001020 GO:2001022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CNDH2_C CNDH2_M CNDH2_N

Protein Analysis

686

Amino Acids

75.62

Weight (kDa)

4.97

Isoelectric Point (pI)

48.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CNDH2_N	PF06278	20 - 136	1.3e-38	Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNDH2_M	PF16869	159 - 309	5.1e-26	Condensin II complex subunit CAP-H2 or CNDH2, mid domain
CNDH2_C	PF16858	464 - 598	2e-38	Condensin II complex subunit CAP-H2 or CNDH2, C-terminal wHTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16730
fragaria_vesca	FvH4_4g18640 FvH4_4g18640 FvH4_4g18640
malus_domestica	MD13G1164900.v1.1 MD16G1164600.v1.1
prunus_persica	Prupe.1G123900_v2.0.a1
pyrus_communis	pycom13g14100 pycom16g13930
rosa_chinensis	RchiOBHm_Chr4g0423341
rosa_laevigata	RLG00000007567
rosa_multiflora	Rmu_sc0001290.1_g000016
rosa_roxburghii	Rroxscaffold_5G00365530
rosa_rugosa	Rorug04G0186700.1 Rorug04G0186800
rosa_samantha	Rh4AG245900 Rh4BG251300 Rh4CG259700 Rh4DG246200
rosa_wichuraiana	Rw4G021130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1063
AatII	GACGTC	1 cut(s)	1114
Acc36I	ACCTGC	1 cut(s)	1063
Acc65I	GGTACC	1 cut(s)	1070
AccB1I	GGYRCC	2 cut(s)	1070, 1346
AccBSI	CCGCTC	1 cut(s)	17
AccIII	TCCGGA	1 cut(s)	533
AciI	CCGC	7 cut(s)	17, 27, 71, 159, 362, 635, 1725
AclWI	GGATC	4 cut(s)	590, 815, 920, 1367
AcoI	YGGCCR	2 cut(s)	558, 1650
AcsI	RAATTY	3 cut(s)	961, 1198, 1563
AcuI	CTGAAG	3 cut(s)	197, 360, 426
AcyI	GRCGYC	3 cut(s)	1111, 1239, 1977
AdeI	CACNNNGTG	1 cut(s)	64
AfaI	GTAC	3 cut(s)	1072, 1302, 2017
AfiI	CCNNNNNNNGG	6 cut(s)	51, 244, 344, 1226, 1268, 1343
AgsI	TTSAA	9 cut(s)	335, 463, 503, 901, 943, 1482, 1547, 1586, 2030
AjnI	CCWGG	6 cut(s)	576, 826, 889, 955, 1652, 2053
AjuI	GAANNNNNNNTTGG	2 cut(s)	90, 122
Alw21I	GWGCWC	2 cut(s)	1323, 1506
Alw26I	GTCTC	3 cut(s)	705, 774, 1839
AlwI	GGATC	4 cut(s)	590, 815, 920, 1367
AlwNI	CAGNNNCTG	1 cut(s)	1283
Ama87I	CYCGRG	1 cut(s)	1261
Aor13HI	TCCGGA	1 cut(s)	533
AoxI	GGCC	3 cut(s)	558, 815, 1650
ApeKI	GCWGC	6 cut(s)	39, 200, 831, 1165, 1469, 1748
ApoI	RAATTY	3 cut(s)	961, 1198, 1563
AseI	ATTAAT	1 cut(s)	186
Asp700I	GAANNNNTTC	1 cut(s)	1563
Asp718I	GGTACC	1 cut(s)	1070
AspLEI	GCGC	2 cut(s)	44, 1989
AspS9I	GGNCC	3 cut(s)	815, 1137, 1334
AsuC2I	CCSGG	2 cut(s)	1262, 1263
AsuHPI	GGTGA	4 cut(s)	518, 539, 1406, 1884
AsuNHI	GCTAGC	1 cut(s)	1433
AvaI	CYCGRG	1 cut(s)	1261
AvaII	GGWCC	2 cut(s)	1137, 1334
BalI	TGGCCA	2 cut(s)	560, 1652
BanI	GGYRCC	2 cut(s)	1070, 1346
BauI	CACGAG	2 cut(s)	1322, 1473
Bbv12I	GWGCWC	2 cut(s)	1323, 1506
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	6 cut(s)	26, 187, 818, 1152, 1456, 1735
BccI	CCATC	5 cut(s)	632, 1178, 1199, 1322, 1715
BceAI	ACGGC	4 cut(s)	187, 337, 865, 1392
BciT130I	CCWGG	6 cut(s)	578, 828, 891, 957, 1654, 2055
BcnI	CCSGG	2 cut(s)	1262, 1263
BcoDI	GTCTC	3 cut(s)	705, 774, 1839
BfaI	CTAG	5 cut(s)	83, 101, 491, 542, 1434
BfuAI	ACCTGC	1 cut(s)	1063
BglII	AGATCT	2 cut(s)	103, 1934
BisI	GCNGC	7 cut(s)	28, 40, 201, 832, 1166, 1470, 1749
BlsI	GCNGC	7 cut(s)	29, 41, 202, 833, 1167, 1471, 1750
BmcAI	AGTACT	1 cut(s)	2017
Bme1390I	CCNGG	8 cut(s)	578, 828, 891, 957, 1262, 1263, 1654, 2055
Bme18I	GGWCC	2 cut(s)	1137, 1334
BmeT110I	CYCGRG	1 cut(s)	1261
BmgT120I	GGNCC	3 cut(s)	815, 1137, 1334
BmiI	GGNNCC	8 cut(s)	21, 56, 888, 1072, 1138, 1139, 1348, 1772
BmrFI	CCNGG	8 cut(s)	578, 828, 891, 957, 1262, 1263, 1654, 2055
BmrI	ACTGGG	1 cut(s)	1018
BmsI	GCATC	5 cut(s)	595, 1040, 1270, 1411, 1987
BmtI	GCTAGC	1 cut(s)	1437
BmuI	ACTGGG	1 cut(s)	1018
BpmI	CTGGAG	1 cut(s)	2037
Bpu10I	CCTNAGC	1 cut(s)	134
BpuEI	CTTGAG	1 cut(s)	1104
BpuMI	CCSGG	2 cut(s)	1262, 1263
BsaBI	GATNNNNATC	1 cut(s)	924
BsaHI	GRCGYC	3 cut(s)	1111, 1239, 1977
BsaJI	CCNNGG	5 cut(s)	890, 929, 956, 1261, 2054
BsaWI	WCCGGW	1 cut(s)	533
BsaXI	ACNNNNNCTCC	2 cut(s)	1999, 2029
Bsc4I	CCNNNNNNNGG	6 cut(s)	51, 244, 344, 1226, 1268, 1343
Bse1I	ACTGG	5 cut(s)	529, 1013, 1470, 1683, 1807
Bse3DI	GCAATG	1 cut(s)	405
Bse8I	GATNNNNATC	1 cut(s)	924
BseAI	TCCGGA	1 cut(s)	533
BseBI	CCWGG	6 cut(s)	578, 828, 891, 957, 1654, 2055
BseDI	CCNNGG	5 cut(s)	890, 929, 956, 1261, 2054
BseGI	GGATG	5 cut(s)	643, 877, 916, 1257, 1333
BseJI	GATNNNNATC	1 cut(s)	924
BseLI	CCNNNNNNNGG	6 cut(s)	51, 244, 344, 1226, 1268, 1343
BseMI	GCAATG	1 cut(s)	405
BseMII	CTCAG	1 cut(s)	125
BseNI	ACTGG	5 cut(s)	529, 1013, 1470, 1683, 1807
BseRI	GAGGAG	2 cut(s)	1137, 2020
BseXI	GCAGC	6 cut(s)	26, 187, 818, 1152, 1456, 1735
BseYI	CCCAGC	1 cut(s)	481
BsgI	GTGCAG	3 cut(s)	86, 711, 1650
BshFI	GGCC	3 cut(s)	560, 817, 1652
BshNI	GGYRCC	2 cut(s)	1070, 1346
BsiHKAI	GWGCWC	2 cut(s)	1323, 1506
BsiHKCI	CYCGRG	1 cut(s)	1261
BsiSI	CCGG	6 cut(s)	45, 147, 238, 534, 1262, 1965
BslFI	GGGAC	4 cut(s)	730, 736, 908, 1123
BslI	CCNNNNNNNGG	6 cut(s)	51, 244, 344, 1226, 1268, 1343
BsmAI	GTCTC	3 cut(s)	705, 774, 1839
BsmFI	GGGAC	4 cut(s)	730, 736, 908, 1123
BsmI	GAATGC	1 cut(s)	757
BsnI	GGCC	3 cut(s)	560, 817, 1652
BsoBI	CYCGRG	1 cut(s)	1261
Bsp1286I	GDGCHC	2 cut(s)	1323, 1506
Bsp13I	TCCGGA	1 cut(s)	533
Bsp143I	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
BspACI	CCGC	7 cut(s)	17, 27, 71, 159, 362, 635, 1725
BspANI	GGCC	3 cut(s)	560, 817, 1652
BspCNI	CTCAG	1 cut(s)	126
BspEI	TCCGGA	1 cut(s)	533
BspLI	GGNNCC	8 cut(s)	21, 56, 888, 1072, 1138, 1139, 1348, 1772
BspMI	ACCTGC	1 cut(s)	1063
BspOI	GCTAGC	1 cut(s)	1437
BspPI	GGATC	4 cut(s)	590, 815, 920, 1367
BspQI	GCTCTTC	2 cut(s)	1216, 1509
BspT107I	GGYRCC	2 cut(s)	1070, 1346
BsrBI	CCGCTC	1 cut(s)	17
BsrDI	GCAATG	1 cut(s)	405
BsrI	ACTGG	5 cut(s)	529, 1013, 1470, 1683, 1807
BssECI	CCNNGG	5 cut(s)	890, 929, 956, 1261, 2054
BssMI	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
BssNI	GRCGYC	3 cut(s)	1111, 1239, 1977
BssSI	CACGAG	2 cut(s)	1322, 1473
BssT1I	CCWWGG	1 cut(s)	929
Bst2BI	CACGAG	2 cut(s)	1322, 1473
Bst2UI	CCWGG	6 cut(s)	578, 828, 891, 957, 1654, 2055
Bst4CI	ACNGT	1 cut(s)	64
Bst6I	CTCTTC	5 cut(s)	117, 1216, 1311, 1509, 1786
BstACI	GRCGYC	3 cut(s)	1111, 1239, 1977
BstC8I	GCNNGC	7 cut(s)	69, 159, 273, 302, 1029, 1390, 1435
BstDEI	CTNAG	5 cut(s)	134, 430, 514, 1023, 1775
BstENI	CCTNNNNNAGG	1 cut(s)	342
BstF5I	GGATG	5 cut(s)	643, 877, 916, 1257, 1333
BstHHI	GCGC	2 cut(s)	44, 1989
BstKTI	GATC	7 cut(s)	106, 571, 598, 823, 928, 1375, 1937
BstMAI	GTCTC	3 cut(s)	705, 774, 1839
BstMBI	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 73, 200, 416, 1037, 1430, 1439
BstNI	CCWGG	6 cut(s)	578, 828, 891, 957, 1654, 2055
BstSCI	CCNGG	8 cut(s)	576, 826, 889, 955, 1260, 1261, 1652, 2053
BstV1I	GCAGC	6 cut(s)	26, 187, 818, 1152, 1456, 1735
BstX2I	RGATCY	4 cut(s)	103, 595, 1372, 1934
BstYI	RGATCY	4 cut(s)	103, 595, 1372, 1934
BsuRI	GGCC	3 cut(s)	560, 817, 1652
BtsCI	GGATG	5 cut(s)	643, 877, 916, 1257, 1333
BtsI	GCAGTG	2 cut(s)	37, 417
BtsIMutI	CAGTG	2 cut(s)	37, 417
BveI	ACCTGC	1 cut(s)	1063
Cac8I	GCNNGC	7 cut(s)	69, 159, 273, 302, 1029, 1390, 1435
CaiI	CAGNNNCTG	1 cut(s)	1283
CfoI	GCGC	2 cut(s)	44, 1989
Cfr13I	GGNCC	3 cut(s)	815, 1137, 1334
Cfr9I	CCCGGG	1 cut(s)	1261
CseI	GACGC	2 cut(s)	1247, 1966
Csp6I	GTAC	3 cut(s)	1071, 1301, 2016
CviAII	CATG	9 cut(s)	600, 857, 950, 1115, 1193, 1385, 1485, 1763, 1781
CviQI	GTAC	3 cut(s)	1071, 1301, 2016
DdeI	CTNAG	5 cut(s)	134, 430, 514, 1023, 1775
DpnI	GATC	7 cut(s)	105, 570, 597, 822, 927, 1374, 1936
DpnII	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
DraI	TTTAAA	3 cut(s)	966, 982, 1000
DraIII	CACNNNGTG	1 cut(s)	64
EaeI	YGGCCR	2 cut(s)	558, 1650
Eam1104I	CTCTTC	5 cut(s)	117, 1216, 1311, 1509, 1786
EarI	CTCTTC	5 cut(s)	117, 1216, 1311, 1509, 1786
EciI	GGCGGA	1 cut(s)	86
Eco130I	CCWWGG	1 cut(s)	929
Eco47I	GGWCC	2 cut(s)	1137, 1334
Eco57I	CTGAAG	3 cut(s)	197, 360, 426
Eco88I	CYCGRG	1 cut(s)	1261
EcoNI	CCTNNNNNAGG	1 cut(s)	342
EcoO109I	RGGNCCY	1 cut(s)	1137
EcoRI	GAATTC	1 cut(s)	1563
EcoRII	CCWGG	6 cut(s)	576, 826, 889, 955, 1652, 2053
EcoT14I	CCWWGG	1 cut(s)	929
ErhI	CCWWGG	1 cut(s)	929
FaeI	CATG	9 cut(s)	603, 860, 953, 1118, 1196, 1388, 1488, 1766, 1784
FalI	AAGNNNNNCTT	2 cut(s)	649, 681
FaqI	GGGAC	4 cut(s)	730, 736, 908, 1123
FatI	CATG	9 cut(s)	599, 856, 949, 1114, 1192, 1384, 1484, 1762, 1780
FauI	CCCGC	1 cut(s)	166
Fnu4HI	GCNGC	7 cut(s)	28, 40, 201, 832, 1166, 1470, 1749
FokI	GGATG	5 cut(s)	650, 884, 923, 1244, 1340
Fsp4HI	GCNGC	7 cut(s)	28, 40, 201, 832, 1166, 1470, 1749
FspBI	CTAG	5 cut(s)	83, 101, 491, 542, 1434
GlaI	GCGC	2 cut(s)	43, 1988
GluI	GCNGC	7 cut(s)	28, 40, 201, 832, 1166, 1470, 1749
GsaI	CCCAGC	1 cut(s)	485
GsuI	CTGGAG	1 cut(s)	2037
HaeIII	GGCC	3 cut(s)	560, 817, 1652
HapII	CCGG	6 cut(s)	45, 147, 238, 534, 1262, 1965
HgaI	GACGC	2 cut(s)	1247, 1966
HhaI	GCGC	2 cut(s)	44, 1989
Hin1I	GRCGYC	3 cut(s)	1111, 1239, 1977
Hin1II	CATG	9 cut(s)	603, 860, 953, 1118, 1196, 1388, 1488, 1766, 1784
Hin6I	GCGC	2 cut(s)	42, 1987
HinP1I	GCGC	2 cut(s)	42, 1987
HindIII	AAGCTT	4 cut(s)	691, 993, 1356, 1390
HinfI	GANTC	8 cut(s)	86, 463, 530, 545, 782, 943, 1244, 1523
HpaII	CCGG	6 cut(s)	45, 147, 238, 534, 1262, 1965
HphI	GGTGA	4 cut(s)	518, 539, 1406, 1884
Hpy166II	GTNNAC	2 cut(s)	1684, 1864
Hpy188I	TCNGA	4 cut(s)	319, 886, 1249, 1618
Hpy188III	TCNNGA	9 cut(s)	12, 534, 717, 1082, 1121, 1547, 1568, 1818, 1994
Hpy8I	GTNNAC	2 cut(s)	1684, 1864
Hpy99I	CGWCG	2 cut(s)	1113, 1241
HpyAV	CCTTC	5 cut(s)	235, 338, 450, 497, 1906
HpyCH4III	ACNGT	1 cut(s)	64
HpyCH4IV	ACGT	2 cut(s)	712, 1111
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 73, 200, 416, 1037, 1430, 1439
HpyF3I	CTNAG	5 cut(s)	134, 430, 514, 1023, 1775
HpySE526I	ACGT	2 cut(s)	712, 1111
Hsp92I	GRCGYC	3 cut(s)	1111, 1239, 1977
Hsp92II	CATG	9 cut(s)	603, 860, 953, 1118, 1196, 1388, 1488, 1766, 1784
HspAI	GCGC	2 cut(s)	42, 1987
KflI	GGGWCCC	1 cut(s)	1137
Kpn2I	TCCGGA	1 cut(s)	533
KpnI	GGTACC	1 cut(s)	1074
Kzo9I	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
LguI	GCTCTTC	2 cut(s)	1216, 1509
LmnI	GCTCC	6 cut(s)	19, 73, 149, 886, 1656, 1776
Lsp1109I	GCAGC	6 cut(s)	26, 187, 818, 1152, 1456, 1735
LweI	GCATC	5 cut(s)	595, 1040, 1270, 1411, 1987
MaeI	CTAG	5 cut(s)	83, 101, 491, 542, 1434
MaeII	ACGT	2 cut(s)	712, 1111
MaeIII	GTNAC	3 cut(s)	77, 735, 1978
MalI	GATC	7 cut(s)	105, 570, 597, 822, 927, 1374, 1936
MbiI	CCGCTC	1 cut(s)	17
MboI	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
MfeI	CAATTG	1 cut(s)	91
MflI	RGATCY	4 cut(s)	103, 595, 1372, 1934
MhlI	GDGCHC	2 cut(s)	1323, 1506
MlsI	TGGCCA	2 cut(s)	560, 1652
MluNI	TGGCCA	2 cut(s)	560, 1652
MlyI	GAGTC	1 cut(s)	554
MmeI	TCCRAC	2 cut(s)	1683, 1967
Mox20I	TGGCCA	2 cut(s)	560, 1652
MroI	TCCGGA	1 cut(s)	533
MroXI	GAANNNNTTC	1 cut(s)	1563
MscI	TGGCCA	2 cut(s)	560, 1652
MseI	TTAA	6 cut(s)	186, 618, 965, 981, 999, 1830
MslI	CAYNNNNRTG	6 cut(s)	410, 861, 1094, 1314, 1326, 1419
Msp20I	TGGCCA	2 cut(s)	560, 1652
MspA1I	CMGCKG	1 cut(s)	1748
MspI	CCGG	6 cut(s)	45, 147, 238, 534, 1262, 1965
MspR9I	CCNGG	8 cut(s)	578, 828, 891, 957, 1262, 1263, 1654, 2055
MunI	CAATTG	1 cut(s)	91
Mva1269I	GAATGC	1 cut(s)	757
MvaI	CCWGG	6 cut(s)	578, 828, 891, 957, 1654, 2055
MwoI	GCNNNNNNNGC	7 cut(s)	36, 73, 200, 416, 1037, 1430, 1439
NciI	CCSGG	2 cut(s)	1262, 1263
NdeII	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
NheI	GCTAGC	1 cut(s)	1433
NlaIII	CATG	9 cut(s)	603, 860, 953, 1118, 1196, 1388, 1488, 1766, 1784
NlaIV	GGNNCC	8 cut(s)	21, 56, 888, 1072, 1138, 1139, 1348, 1772
NmuCI	GTSAC	3 cut(s)	77, 735, 1978
PaqCI	CACCTGC	1 cut(s)	1063
PciSI	GCTCTTC	2 cut(s)	1216, 1509
PctI	GAATGC	1 cut(s)	757
PdmI	GAANNNNTTC	1 cut(s)	1563
PfeI	GAWTC	7 cut(s)	86, 463, 530, 782, 943, 1244, 1523
PkrI	GCNGC	7 cut(s)	29, 41, 202, 833, 1167, 1471, 1750
PleI	GAGTC	1 cut(s)	553
PpsI	GAGTC	1 cut(s)	553
PpuMI	RGGWCCY	1 cut(s)	1137
PshBI	ATTAAT	1 cut(s)	186
Psp5II	RGGWCCY	1 cut(s)	1137
Psp6I	CCWGG	6 cut(s)	576, 826, 889, 955, 1652, 2053
PspFI	CCCAGC	1 cut(s)	481
PspGI	CCWGG	6 cut(s)	576, 826, 889, 955, 1652, 2053
PspN4I	GGNNCC	8 cut(s)	21, 56, 888, 1072, 1138, 1139, 1348, 1772
PspPI	GGNCC	3 cut(s)	815, 1137, 1334
PspPPI	RGGWCCY	1 cut(s)	1137
PstNI	CAGNNNCTG	1 cut(s)	1283
PsuI	RGATCY	4 cut(s)	103, 595, 1372, 1934
PvuII	CAGCTG	1 cut(s)	1748
RsaI	GTAC	3 cut(s)	1072, 1302, 2017
RsaNI	GTAC	3 cut(s)	1071, 1301, 2016
RseI	CAYNNNNRTG	6 cut(s)	410, 861, 1094, 1314, 1326, 1419
SapI	GCTCTTC	2 cut(s)	1216, 1509
SaqAI	TTAA	6 cut(s)	186, 618, 965, 981, 999, 1830
SatI	GCNGC	7 cut(s)	28, 40, 201, 832, 1166, 1470, 1749
Sau3AI	GATC	7 cut(s)	103, 568, 595, 820, 925, 1372, 1934
Sau96I	GGNCC	3 cut(s)	815, 1137, 1334
ScaI	AGTACT	1 cut(s)	2017
SchI	GAGTC	1 cut(s)	554
ScrFI	CCNGG	8 cut(s)	578, 828, 891, 957, 1262, 1263, 1654, 2055
SduI	GDGCHC	2 cut(s)	1323, 1506
SfaNI	GCATC	5 cut(s)	595, 1040, 1270, 1411, 1987
SinI	GGWCC	2 cut(s)	1137, 1334
SmaI	CCCGGG	1 cut(s)	1263
SmiMI	CAYNNNNRTG	6 cut(s)	410, 861, 1094, 1314, 1326, 1419
SmlI	CTYRAG	1 cut(s)	1119
SmoI	CTYRAG	1 cut(s)	1119
SsiI	CCGC	7 cut(s)	17, 27, 71, 159, 362, 635, 1725
SspI	AATATT	1 cut(s)	811
SspMI	CTAG	5 cut(s)	83, 101, 491, 542, 1434
StyD4I	CCNGG	8 cut(s)	576, 826, 889, 955, 1260, 1261, 1652, 2053
StyI	CCWWGG	1 cut(s)	929
TaaI	ACNGT	1 cut(s)	64
TaiI	ACGT	2 cut(s)	715, 1114
TaqI	TCGA	4 cut(s)	120, 685, 1817, 2020
TatI	WGTACW	1 cut(s)	2015
TauI	GCSGC	1 cut(s)	30
TfiI	GAWTC	7 cut(s)	86, 463, 530, 782, 943, 1244, 1523
Tru1I	TTAA	6 cut(s)	186, 618, 965, 981, 999, 1830
Tru9I	TTAA	6 cut(s)	186, 618, 965, 981, 999, 1830
TscAI	CASTG	2 cut(s)	37, 417
TseFI	GTSAC	3 cut(s)	77, 735, 1978
TseI	GCWGC	6 cut(s)	39, 200, 831, 1165, 1469, 1748
Tsp45I	GTSAC	3 cut(s)	77, 735, 1978
TspDTI	ATGAA	8 cut(s)	387, 574, 918, 966, 1209, 1238, 1368, 1383
TspGWI	ACGGA	1 cut(s)	1827
TspMI	CCCGGG	1 cut(s)	1261
TspRI	CASTG	2 cut(s)	37, 417
VpaK11BI	GGWCC	2 cut(s)	1137, 1334
VspI	ATTAAT	1 cut(s)	186
XagI	CCTNNNNNAGG	1 cut(s)	342
XapI	RAATTY	3 cut(s)	961, 1198, 1563
XmaI	CCCGGG	1 cut(s)	1261
XmnI	GAANNNNTTC	1 cut(s)	1563
XspI	CTAG	5 cut(s)	83, 101, 491, 542, 1434
ZraI	GACGTC	1 cut(s)	1112
ZrmI	AGTACT	1 cut(s)	2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.