Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001290.1

Orthogroup ID

OG0011083

Physical Location & Seq

Genomic Coordinates Reverse (-)

63899 .. 68499

Gene Structure 4601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001290.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

atgactaacgccagagcggagccaagcggcagtggcggcggcgccggaggtgggttccacactgtgcaggcggagcgtgacctagaatccaattgggaactagatcttggaacaaaactcgaagagtatttgctgaggatttgctccggcgaactgcccgccgaagccgacggcattgtgtctattaatttcgccgaagctgcactgctacttcagggttcggttcaggtgtatagccggaaggtcgaatatctttactcgttggtcttgcgtgctttggagtttctttcccaaaaaaggcagaatgaccaatcagacggcacatcagttcaaactgaagaaggtgggagttccaatgcagttgctgacgaagaaaatgataggttttggggattagatgacattgcagtggaagcaaaaaattgcttagacagtccttcaggcagagatgttccttcgaatccctttgtgaagcccccagcaaatctagttgtccttgaaggtgattgcttagatacaactggtgattccggagaactagagtcatatctgttggccacaaatgatctttaccaggatttcattttgttagatccatgtgattcagtagcagttaatgattatttgggtgcggatggagttagtagaggacaaagtagtgcttatagggtcagctcaactcgaaaaagctttctgtctcccacaggacgttcaggagggactgcacataagtcacaaaagtcccagaatgctaatgtcaatcagtctcctatggttgattctcactttgaggtcaatggttgtaatattgggcctgatcctcctggctgcaataattttgatgacggcactcatgggtatgatatggatgatagatactcagagcctagggacttggatgaattggatgatgacgacgatgatccatggaagcctttgaatccacatgaacctgggaatttgaaagtaaagccttttaaaaaagtcaaagcttttaaaaggaaaggggttaattcttctaagcaggcatctatggcaacaatgtttccacctgcaaaattgcatggtactattagtccagaactcacagaaatgtgggagatacgacgtcatgctcaagaacagcaaagggggtcccaatctcctccattatttgagaagctgcgacaatcacttattgatggaaaacatgaaaattttgatggctcttctaatcctatgaatggaaatgacgacgccgaatctgataatgacatcccgggttttgggcaaccagatgctgacataccagaagatgtacctcttcacaatgatgagcacgaggatggtggtcctcactttggcactgatgaagcttttggatatgaagatccaaaccctcatgcaagcttggaagatttatgccgttctcacctagatgctctacttgctagcatagctgaaaacgagaagcaaactgaactggctgctcgtgtttcaacatggaaacagaaaattgagcacaacttggaagagcaagaatcacaccctccttttgacattcaagactatggtgaaagaattcttgatagactatccgttgaaccagaagatagaaatgtattgcccttttctgatgtcgtcaaaggtcagggaaagtatgatgtggccaggagcttttctgcactactgcaactggtaaacaatggaaatgttgagttggataggagtgtagttgatggtggtcagcctgtttgtttcacagctgccaatcctttccatgttcggctcctaagacatgacagaagaagagtggaaactggatttcggctgtcgagaaagagagttaagtctccattgaggaaagcatgtagaaaagtcgacaacgacaagaatggaattgagaaatcacccttcgtcaagtcatcatcaaagacaagtaaatcaaaaagaagatctactccaacaaactgcaagttgtcagccggaaagaatggcgtcacagggcgcagtcctgatgccaagaggagaaaaagtactcgatttgttgaaccacttgatgacctacattctccagggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000793 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006282 GO:0008150 GO:0009893 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045739 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0080134 GO:0080135 GO:2001020 GO:2001022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CNDH2_C CNDH2_M CNDH2_N

Protein Analysis

686

Amino Acids

75.56

Weight (kDa)

5.02

Isoelectric Point (pI)

49.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16730
fragaria_vesca	FvH4_4g18640 FvH4_4g18640 FvH4_4g18640
malus_domestica	MD13G1164900.v1.1 MD16G1164600.v1.1
prunus_persica	Prupe.1G123900_v2.0.a1
pyrus_communis	pycom13g14100 pycom16g13930
rosa_chinensis	RchiOBHm_Chr4g0423341
rosa_laevigata	RLG00000007567
rosa_multiflora	Rmu_sc0001290.1_g000016
rosa_roxburghii	Rroxscaffold_5G00365530
rosa_rugosa	Rorug04G0186700.1 Rorug04G0186800
rosa_samantha	Rh4AG245900 Rh4BG251300 Rh4CG259700 Rh4DG246200
rosa_wichuraiana	Rw4G021130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1060
AatII	GACGTC	1 cut(s)	1111
Acc36I	ACCTGC	1 cut(s)	1060
AccB1I	GGYRCC	1 cut(s)	41
AccBSI	CCGCTC	1 cut(s)	17
AccI	GTMKAC	1 cut(s)	1860
AccIII	TCCGGA	1 cut(s)	530
AciI	CCGC	7 cut(s)	17, 27, 36, 39, 71, 159, 632
AclWI	GGATC	4 cut(s)	587, 812, 917, 1364
AcoI	YGGCCR	2 cut(s)	555, 1647
AcsI	RAATTY	3 cut(s)	958, 1195, 1560
AcuI	CTGAAG	3 cut(s)	197, 357, 423
AcyI	GRCGYC	4 cut(s)	42, 1108, 1236, 1977
AdeI	CACNNNGTG	1 cut(s)	64
AfaI	GTAC	3 cut(s)	1069, 1299, 2017
AfiI	CCNNNNNNNGG	5 cut(s)	51, 297, 1223, 1265, 1340
AgsI	TTSAA	8 cut(s)	332, 500, 940, 964, 1479, 1544, 1583, 2030
AjnI	CCWGG	5 cut(s)	573, 823, 952, 1649, 2053
AjuI	GAANNNNNNNTTGG	2 cut(s)	90, 122
Alw21I	GWGCWC	2 cut(s)	1320, 1503
Alw26I	GTCTC	3 cut(s)	702, 771, 1836
AlwI	GGATC	4 cut(s)	587, 812, 917, 1364
AlwNI	CAGNNNCTG	2 cut(s)	365, 1280
Ama87I	CYCGRG	1 cut(s)	1258
Aor13HI	TCCGGA	1 cut(s)	530
AoxI	GGCC	3 cut(s)	555, 812, 1647
ApeKI	GCWGC	5 cut(s)	200, 828, 1162, 1466, 1745
ApoI	RAATTY	3 cut(s)	958, 1195, 1560
AseI	ATTAAT	1 cut(s)	186
Asp700I	GAANNNNTTC	1 cut(s)	1560
AspA2I	CCTAGG	1 cut(s)	887
AspLEI	GCGC	2 cut(s)	44, 1989
AspS9I	GGNCC	3 cut(s)	812, 1134, 1331
AsuC2I	CCSGG	2 cut(s)	1259, 1260
AsuHPI	GGTGA	5 cut(s)	515, 536, 1403, 1565, 1881
AsuII	TTCGAA	1 cut(s)	458
AsuNHI	GCTAGC	1 cut(s)	1430
AvaI	CYCGRG	1 cut(s)	1258
AvaII	GGWCC	2 cut(s)	1134, 1331
AvrII	CCTAGG	1 cut(s)	887
BalI	TGGCCA	2 cut(s)	557, 1649
BanI	GGYRCC	1 cut(s)	41
BauI	CACGAG	2 cut(s)	1319, 1470
Bbv12I	GWGCWC	2 cut(s)	1320, 1503
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	5 cut(s)	187, 815, 1149, 1453, 1732
BccI	CCATC	5 cut(s)	629, 1175, 1196, 1319, 1712
BceAI	ACGGC	4 cut(s)	187, 334, 862, 1389
BciT130I	CCWGG	5 cut(s)	575, 825, 954, 1651, 2055
BcnI	CCSGG	2 cut(s)	1259, 1260
BcoDI	GTCTC	3 cut(s)	702, 771, 1836
BfaI	CTAG	7 cut(s)	83, 101, 488, 539, 888, 1415, 1431
BfoI	RGCGCY	1 cut(s)	45
BfuAI	ACCTGC	1 cut(s)	1060
BglII	AGATCT	2 cut(s)	103, 1934
BisI	GCNGC	8 cut(s)	28, 37, 40, 201, 829, 1163, 1467, 1746
BlnI	CCTAGG	1 cut(s)	887
BlsI	GCNGC	8 cut(s)	29, 38, 41, 202, 830, 1164, 1468, 1747
BmcAI	AGTACT	1 cut(s)	2017
Bme1390I	CCNGG	7 cut(s)	575, 825, 954, 1259, 1260, 1651, 2055
Bme18I	GGWCC	2 cut(s)	1134, 1331
BmeT110I	CYCGRG	1 cut(s)	1258
BmgT120I	GGNCC	3 cut(s)	812, 1134, 1331
BmiI	GGNNCC	6 cut(s)	21, 43, 56, 1135, 1136, 1769
BmrFI	CCNGG	7 cut(s)	575, 825, 954, 1259, 1260, 1651, 2055
BmsI	GCATC	4 cut(s)	1037, 1267, 1408, 1987
BmtI	GCTAGC	1 cut(s)	1434
BpmI	CTGGAG	1 cut(s)	2037
Bpu10I	CCTNAGC	1 cut(s)	134
Bpu14I	TTCGAA	1 cut(s)	458
BpuEI	CTTGAG	1 cut(s)	1101
BpuMI	CCSGG	2 cut(s)	1259, 1260
BsaHI	GRCGYC	4 cut(s)	42, 1108, 1236, 1977
BsaJI	CCNNGG	5 cut(s)	887, 926, 953, 1258, 2054
BsaWI	WCCGGW	1 cut(s)	530
BsaXI	ACNNNNNCTCC	2 cut(s)	1999, 2029
Bsc4I	CCNNNNNNNGG	5 cut(s)	51, 297, 1223, 1265, 1340
Bse1I	ACTGG	4 cut(s)	526, 1467, 1680, 1804
Bse3DI	GCAATG	1 cut(s)	402
BseAI	TCCGGA	1 cut(s)	530
BseBI	CCWGG	5 cut(s)	575, 825, 954, 1651, 2055
BseDI	CCNNGG	5 cut(s)	887, 926, 953, 1258, 2054
BseGI	GGATG	6 cut(s)	640, 874, 904, 913, 1254, 1330
BseLI	CCNNNNNNNGG	5 cut(s)	51, 297, 1223, 1265, 1340
BseMI	GCAATG	1 cut(s)	402
BseMII	CTCAG	2 cut(s)	125, 894
BseNI	ACTGG	4 cut(s)	526, 1467, 1680, 1804
BseRI	GAGGAG	2 cut(s)	1134, 2020
BseXI	GCAGC	5 cut(s)	187, 815, 1149, 1453, 1732
BseYI	CCCAGC	1 cut(s)	478
BsgI	GTGCAG	4 cut(s)	86, 186, 708, 1647
BshFI	GGCC	3 cut(s)	557, 814, 1649
BshNI	GGYRCC	1 cut(s)	41
BsiHKAI	GWGCWC	2 cut(s)	1320, 1503
BsiHKCI	CYCGRG	1 cut(s)	1258
BsiSI	CCGG	6 cut(s)	45, 147, 238, 531, 1259, 1965
BslFI	GGGAC	4 cut(s)	727, 733, 905, 1120
BslI	CCNNNNNNNGG	5 cut(s)	51, 297, 1223, 1265, 1340
BsmAI	GTCTC	3 cut(s)	702, 771, 1836
BsmFI	GGGAC	4 cut(s)	727, 733, 905, 1120
BsmI	GAATGC	1 cut(s)	754
BsnI	GGCC	3 cut(s)	557, 814, 1649
BsoBI	CYCGRG	1 cut(s)	1258
Bsp119I	TTCGAA	1 cut(s)	458
Bsp1286I	GDGCHC	2 cut(s)	1320, 1503
Bsp13I	TCCGGA	1 cut(s)	530
Bsp143I	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
Bsp19I	CCATGG	1 cut(s)	926
BspACI	CCGC	7 cut(s)	17, 27, 36, 39, 71, 159, 632
BspANI	GGCC	3 cut(s)	557, 814, 1649
BspCNI	CTCAG	2 cut(s)	126, 893
BspEI	TCCGGA	1 cut(s)	530
BspLI	GGNNCC	6 cut(s)	21, 43, 56, 1135, 1136, 1769
BspMI	ACCTGC	1 cut(s)	1060
BspOI	GCTAGC	1 cut(s)	1434
BspPI	GGATC	4 cut(s)	587, 812, 917, 1364
BspQI	GCTCTTC	2 cut(s)	1213, 1506
BspT104I	TTCGAA	1 cut(s)	458
BspT107I	GGYRCC	1 cut(s)	41
BsrBI	CCGCTC	1 cut(s)	17
BsrDI	GCAATG	1 cut(s)	402
BsrI	ACTGG	4 cut(s)	526, 1467, 1680, 1804
BssECI	CCNNGG	5 cut(s)	887, 926, 953, 1258, 2054
BssMI	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
BssNI	GRCGYC	4 cut(s)	42, 1108, 1236, 1977
BssSI	CACGAG	2 cut(s)	1319, 1470
BssT1I	CCWWGG	2 cut(s)	887, 926
Bst2BI	CACGAG	2 cut(s)	1319, 1470
Bst2UI	CCWGG	5 cut(s)	575, 825, 954, 1651, 2055
Bst4CI	ACNGT	2 cut(s)	64, 434
Bst6I	CTCTTC	5 cut(s)	117, 1213, 1308, 1506, 1783
BstACI	GRCGYC	4 cut(s)	42, 1108, 1236, 1977
BstBI	TTCGAA	1 cut(s)	458
BstC8I	GCNNGC	6 cut(s)	69, 159, 273, 1026, 1387, 1432
BstDEI	CTNAG	6 cut(s)	134, 427, 511, 880, 1020, 1772
BstDSI	CCRYGG	1 cut(s)	926
BstF5I	GGATG	6 cut(s)	640, 874, 904, 913, 1254, 1330
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	2 cut(s)	44, 1989
BstKTI	GATC	7 cut(s)	106, 568, 595, 820, 925, 1372, 1937
BstMAI	GTCTC	3 cut(s)	702, 771, 1836
BstMBI	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
BstMWI	GCNNNNNNNGC	8 cut(s)	33, 36, 73, 200, 413, 1034, 1427, 1436
BstNI	CCWGG	5 cut(s)	575, 825, 954, 1651, 2055
BstNSI	RCATGY	1 cut(s)	1851
BstSCI	CCNGG	7 cut(s)	573, 823, 952, 1257, 1258, 1649, 2053
BstV1I	GCAGC	5 cut(s)	187, 815, 1149, 1453, 1732
BstX2I	RGATCY	4 cut(s)	103, 592, 1369, 1934
BstYI	RGATCY	4 cut(s)	103, 592, 1369, 1934
BsuRI	GGCC	3 cut(s)	557, 814, 1649
BtgI	CCRYGG	1 cut(s)	926
BtsCI	GGATG	6 cut(s)	640, 874, 904, 913, 1254, 1330
BtsI	GCAGTG	3 cut(s)	37, 203, 414
BtsIMutI	CAGTG	5 cut(s)	37, 60, 203, 414, 1344
BveI	ACCTGC	1 cut(s)	1060
Cac8I	GCNNGC	6 cut(s)	69, 159, 273, 1026, 1387, 1432
CaiI	CAGNNNCTG	2 cut(s)	365, 1280
CfoI	GCGC	2 cut(s)	44, 1989
Cfr13I	GGNCC	3 cut(s)	812, 1134, 1331
Cfr9I	CCCGGG	1 cut(s)	1258
CseI	GACGC	2 cut(s)	1244, 1966
Csp6I	GTAC	3 cut(s)	1068, 1298, 2016
CviQI	GTAC	3 cut(s)	1068, 1298, 2016
DdeI	CTNAG	6 cut(s)	134, 427, 511, 880, 1020, 1772
DinI	GGCGCC	1 cut(s)	43
DpnI	GATC	7 cut(s)	105, 567, 594, 819, 924, 1371, 1936
DpnII	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
DraI	TTTAAA	2 cut(s)	979, 997
DraIII	CACNNNGTG	1 cut(s)	64
EaeI	YGGCCR	2 cut(s)	555, 1647
Eam1104I	CTCTTC	5 cut(s)	117, 1213, 1308, 1506, 1783
EarI	CTCTTC	5 cut(s)	117, 1213, 1308, 1506, 1783
EciI	GGCGGA	1 cut(s)	86
Eco130I	CCWWGG	2 cut(s)	887, 926
Eco47I	GGWCC	2 cut(s)	1134, 1331
Eco57I	CTGAAG	3 cut(s)	197, 357, 423
Eco88I	CYCGRG	1 cut(s)	1258
EcoO109I	RGGNCCY	1 cut(s)	1134
EcoRI	GAATTC	1 cut(s)	1560
EcoRII	CCWGG	5 cut(s)	573, 823, 952, 1649, 2053
EcoT14I	CCWWGG	2 cut(s)	887, 926
EgeI	GGCGCC	1 cut(s)	43
EheI	GGCGCC	1 cut(s)	43
ErhI	CCWWGG	2 cut(s)	887, 926
FalI	AAGNNNNNCTT	2 cut(s)	646, 678
FaqI	GGGAC	4 cut(s)	727, 733, 905, 1120
FauI	CCCGC	1 cut(s)	166
FblI	GTMKAC	1 cut(s)	1860
Fnu4HI	GCNGC	8 cut(s)	28, 37, 40, 201, 829, 1163, 1467, 1746
FokI	GGATG	6 cut(s)	647, 881, 911, 920, 1241, 1337
Fsp4HI	GCNGC	8 cut(s)	28, 37, 40, 201, 829, 1163, 1467, 1746
FspBI	CTAG	7 cut(s)	83, 101, 488, 539, 888, 1415, 1431
GlaI	GCGC	2 cut(s)	43, 1988
GluI	GCNGC	8 cut(s)	28, 37, 40, 201, 829, 1163, 1467, 1746
GsaI	CCCAGC	1 cut(s)	482
GsuI	CTGGAG	1 cut(s)	2037
HaeII	RGCGCY	1 cut(s)	45
HaeIII	GGCC	3 cut(s)	557, 814, 1649
HapII	CCGG	6 cut(s)	45, 147, 238, 531, 1259, 1965
HgaI	GACGC	2 cut(s)	1244, 1966
HhaI	GCGC	2 cut(s)	44, 1989
Hin1I	GRCGYC	4 cut(s)	42, 1108, 1236, 1977
Hin6I	GCGC	2 cut(s)	42, 1987
HinP1I	GCGC	2 cut(s)	42, 1987
HincII	GTYRAC	1 cut(s)	1861
HindII	GTYRAC	1 cut(s)	1861
HindIII	AAGCTT	4 cut(s)	688, 990, 1353, 1387
HinfI	GANTC	9 cut(s)	86, 460, 527, 542, 602, 779, 940, 1241, 1520
HpaII	CCGG	6 cut(s)	45, 147, 238, 531, 1259, 1965
HphI	GGTGA	5 cut(s)	515, 536, 1403, 1565, 1881
Hpy166II	GTNNAC	2 cut(s)	1681, 1861
Hpy188I	TCNGA	4 cut(s)	316, 883, 1246, 1615
Hpy188III	TCNNGA	8 cut(s)	531, 714, 1079, 1118, 1544, 1565, 1815, 1994
Hpy8I	GTNNAC	2 cut(s)	1681, 1861
Hpy99I	CGWCG	4 cut(s)	173, 920, 1110, 1238
HpyAV	CCTTC	6 cut(s)	235, 335, 447, 465, 494, 1903
HpyCH4III	ACNGT	2 cut(s)	64, 434
HpyCH4IV	ACGT	2 cut(s)	709, 1108
HpyF10VI	GCNNNNNNNGC	8 cut(s)	33, 36, 73, 200, 413, 1034, 1427, 1436
HpyF3I	CTNAG	6 cut(s)	134, 427, 511, 880, 1020, 1772
HpySE526I	ACGT	2 cut(s)	709, 1108
Hsp92I	GRCGYC	4 cut(s)	42, 1108, 1236, 1977
HspAI	GCGC	2 cut(s)	42, 1987
KasI	GGCGCC	1 cut(s)	41
KflI	GGGWCCC	1 cut(s)	1134
Kpn2I	TCCGGA	1 cut(s)	530
Kzo9I	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
LguI	GCTCTTC	2 cut(s)	1213, 1506
LmnI	GCTCC	5 cut(s)	19, 73, 149, 1653, 1773
Lsp1109I	GCAGC	5 cut(s)	187, 815, 1149, 1453, 1732
LweI	GCATC	4 cut(s)	1037, 1267, 1408, 1987
MaeI	CTAG	7 cut(s)	83, 101, 488, 539, 888, 1415, 1431
MaeII	ACGT	2 cut(s)	709, 1108
MaeIII	GTNAC	3 cut(s)	77, 732, 1978
MalI	GATC	7 cut(s)	105, 567, 594, 819, 924, 1371, 1936
MbiI	CCGCTC	1 cut(s)	17
MboI	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
MfeI	CAATTG	1 cut(s)	91
MflI	RGATCY	4 cut(s)	103, 592, 1369, 1934
MhlI	GDGCHC	2 cut(s)	1320, 1503
MlsI	TGGCCA	2 cut(s)	557, 1649
MluNI	TGGCCA	2 cut(s)	557, 1649
Mly113I	GGCGCC	1 cut(s)	42
MlyI	GAGTC	1 cut(s)	551
MmeI	TCCRAC	2 cut(s)	1680, 1967
Mox20I	TGGCCA	2 cut(s)	557, 1649
MroI	TCCGGA	1 cut(s)	530
MroXI	GAANNNNTTC	1 cut(s)	1560
MscI	TGGCCA	2 cut(s)	557, 1649
MseI	TTAA	6 cut(s)	186, 615, 978, 996, 1011, 1827
MslI	CAYNNNNRTG	6 cut(s)	407, 858, 1091, 1311, 1323, 1416
Msp20I	TGGCCA	2 cut(s)	557, 1649
MspA1I	CMGCKG	1 cut(s)	1745
MspI	CCGG	6 cut(s)	45, 147, 238, 531, 1259, 1965
MspR9I	CCNGG	7 cut(s)	575, 825, 954, 1259, 1260, 1651, 2055
MunI	CAATTG	1 cut(s)	91
Mva1269I	GAATGC	1 cut(s)	754
MvaI	CCWGG	5 cut(s)	575, 825, 954, 1651, 2055
MwoI	GCNNNNNNNGC	8 cut(s)	33, 36, 73, 200, 413, 1034, 1427, 1436
NarI	GGCGCC	1 cut(s)	42
NciI	CCSGG	2 cut(s)	1259, 1260
NcoI	CCATGG	1 cut(s)	926
NdeII	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
NheI	GCTAGC	1 cut(s)	1430
NlaIV	GGNNCC	6 cut(s)	21, 43, 56, 1135, 1136, 1769
NmuCI	GTSAC	3 cut(s)	77, 732, 1978
NspI	RCATGY	1 cut(s)	1851
NspV	TTCGAA	1 cut(s)	458
PaqCI	CACCTGC	1 cut(s)	1060
PciSI	GCTCTTC	2 cut(s)	1213, 1506
PctI	GAATGC	1 cut(s)	754
PdmI	GAANNNNTTC	1 cut(s)	1560
PfeI	GAWTC	8 cut(s)	86, 460, 527, 602, 779, 940, 1241, 1520
PkrI	GCNGC	8 cut(s)	29, 38, 41, 202, 830, 1164, 1468, 1747
PleI	GAGTC	1 cut(s)	550
PluTI	GGCGCC	1 cut(s)	45
PpsI	GAGTC	1 cut(s)	550
PpuMI	RGGWCCY	1 cut(s)	1134
PshBI	ATTAAT	1 cut(s)	186
Psp5II	RGGWCCY	1 cut(s)	1134
Psp6I	CCWGG	5 cut(s)	573, 823, 952, 1649, 2053
PspFI	CCCAGC	1 cut(s)	478
PspGI	CCWGG	5 cut(s)	573, 823, 952, 1649, 2053
PspN4I	GGNNCC	6 cut(s)	21, 43, 56, 1135, 1136, 1769
PspPI	GGNCC	3 cut(s)	812, 1134, 1331
PspPPI	RGGWCCY	1 cut(s)	1134
PstNI	CAGNNNCTG	2 cut(s)	365, 1280
PsuI	RGATCY	4 cut(s)	103, 592, 1369, 1934
PvuII	CAGCTG	1 cut(s)	1745
RsaI	GTAC	3 cut(s)	1069, 1299, 2017
RsaNI	GTAC	3 cut(s)	1068, 1298, 2016
RseI	CAYNNNNRTG	6 cut(s)	407, 858, 1091, 1311, 1323, 1416
SalI	GTCGAC	1 cut(s)	1859
SapI	GCTCTTC	2 cut(s)	1213, 1506
SaqAI	TTAA	6 cut(s)	186, 615, 978, 996, 1011, 1827
SatI	GCNGC	8 cut(s)	28, 37, 40, 201, 829, 1163, 1467, 1746
Sau3AI	GATC	7 cut(s)	103, 565, 592, 817, 922, 1369, 1934
Sau96I	GGNCC	3 cut(s)	812, 1134, 1331
ScaI	AGTACT	1 cut(s)	2017
SchI	GAGTC	1 cut(s)	551
ScrFI	CCNGG	7 cut(s)	575, 825, 954, 1259, 1260, 1651, 2055
SduI	GDGCHC	2 cut(s)	1320, 1503
SfaNI	GCATC	4 cut(s)	1037, 1267, 1408, 1987
SfoI	GGCGCC	1 cut(s)	43
SfuI	TTCGAA	1 cut(s)	458
SinI	GGWCC	2 cut(s)	1134, 1331
SmaI	CCCGGG	1 cut(s)	1260
SmiMI	CAYNNNNRTG	6 cut(s)	407, 858, 1091, 1311, 1323, 1416
SmlI	CTYRAG	1 cut(s)	1116
SmoI	CTYRAG	1 cut(s)	1116
SsiI	CCGC	7 cut(s)	17, 27, 36, 39, 71, 159, 632
SspDI	GGCGCC	1 cut(s)	41
SspI	AATATT	1 cut(s)	808
SspMI	CTAG	7 cut(s)	83, 101, 488, 539, 888, 1415, 1431
StyD4I	CCNGG	7 cut(s)	573, 823, 952, 1257, 1258, 1649, 2053
StyI	CCWWGG	2 cut(s)	887, 926
TaaI	ACNGT	2 cut(s)	64, 434
TaiI	ACGT	2 cut(s)	712, 1111
TaqI	TCGA	7 cut(s)	120, 246, 458, 682, 1814, 1860, 2020
TatI	WGTACW	1 cut(s)	2015
TauI	GCSGC	3 cut(s)	30, 39, 42
TfiI	GAWTC	8 cut(s)	86, 460, 527, 602, 779, 940, 1241, 1520
Tru1I	TTAA	6 cut(s)	186, 615, 978, 996, 1011, 1827
Tru9I	TTAA	6 cut(s)	186, 615, 978, 996, 1011, 1827
TscAI	CASTG	5 cut(s)	37, 67, 210, 414, 1351
TseFI	GTSAC	3 cut(s)	77, 732, 1978
TseI	GCWGC	5 cut(s)	200, 828, 1162, 1466, 1745
Tsp45I	GTSAC	3 cut(s)	77, 732, 1978
TspDTI	ATGAA	7 cut(s)	571, 915, 963, 1206, 1235, 1365, 1380
TspGWI	ACGGA	1 cut(s)	1567
TspMI	CCCGGG	1 cut(s)	1258
TspRI	CASTG	5 cut(s)	37, 67, 210, 414, 1351
VpaK11BI	GGWCC	2 cut(s)	1134, 1331
VspI	ATTAAT	1 cut(s)	186
XapI	RAATTY	3 cut(s)	958, 1195, 1560
XceI	RCATGY	1 cut(s)	1851
XmaI	CCCGGG	1 cut(s)	1258
XmaJI	CCTAGG	1 cut(s)	887
XmiI	GTMKAC	1 cut(s)	1860
XmnI	GAANNNNTTC	1 cut(s)	1560
XspI	CTAG	7 cut(s)	83, 101, 488, 539, 888, 1415, 1431
ZraI	GACGTC	1 cut(s)	1109
ZrmI	AGTACT	1 cut(s)	2017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.