Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0011083

Physical Location & Seq

Genomic Coordinates Forward (+)

13634886 .. 13639843

Gene Structure 4958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1164600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGACTAACGCCAGAGACGAACCGGGTGGAAGCAACAGCGGGGGCGGTGGAGGCGGATTTCATAGAGTGCAAGCAGAGCGTGACCTAGAATCCAATTGGGAACTCGATCTCGCACAAAAACTCGAAGAGTATTTGCTCAAGATTTGCTCCGGTGAAATACCCACTGAAGCAGAAGGCCATGTCGCTATTAATTTCGCAGAAGCTGCGCTGCTTCTTCAAGGTTCGGTCCAAGTGTATAGCCGGAAGGTGGAGTATCTGTACTCGTTGGTTTTGCGTGCTTTGGAGTTCCTTTCCCAAAAGGGGCAGCATGAACAATCCGAAGGAACATCTGTTCGACCTGAAGAAGGTGGGAGTTCCCATGATGTTTCTGATGAAGAAAATGATATGTTTTGGAGCTTAGATGACATTGCAGTGGAAGCAAAGAATTGCTTAGATAGTCCATCGGGAAGAGATGCTCCTCTGAATCCCTTTGTGAAGCCCCCAGCAAACCTAGTTGTGCTCGAAGGTGATTGCCTAGATACTACTGGTGATTTCGGAGAATTAGAGGCATATCTGCTGGCCACCAACGATCTATATCAGGATTTCATTTTATTAGATCCATGTGATGCTGTAGCAGTAAATGATTATTTGAGTGTGGATGGAGTTGTTAAAGGACAAAATAGTGCTTATAGGGTCACCTCAGCACGAAAAAGTCATCAGACTCCCAGACGTTCAGGTGGAACTGCACATAGGTCATCTCTTCATAAGGGGCAGGATCCTAATATTAATCAATCTCCTATCATCGGTTGCAGTTTTGAGGCAAATAATTGTAATATTGGACCTGATCCTCCTGCCTGCAATGATTTTGATGATGGTACTCAGGGATTTGATATGGATGATAGATATTCAGAGCCCAGGGACTTGGATGATTCAGATGATGATGGTAATGATCCATGGAAGCCACTGAATCCCCATGAACCTGGGAACTTGAAAGTGAAACCATTTAGGAAAGTCAGAGCTTCTAAAAGCAAAGGATTCAATTCTACTAAGCACGTCTCTATTATTACACTGTTTCCACCTGCAAAATTGCATGGTACTATTAGTCCAGAGCTCACAGAAATGTGGCAGATTCGATGTCATGCCGAGGAGAGACAAAAGGGGTCCCAATCTCCTCCATTATTTGAAAAGCTACGGGAATCACTTGTTAATGGAAGAGAAGAATCCTTTGATCCCTTTTGCAATCCTCTGGATGGAAATGAGGATACTGAATATGATAATGAGATCCCTAATTTTGGGCAACCAGATGCTGACTTGCCAGAATTCATGGATGATGTACCACGGCACAGTGATATGAATGAGGACAGTGGTCCTCACTTTGGTAATGTTGAACCATTTGACGACGATCCAAATCCTCATGCAAGCCTGGAAGATTTGTGTCGCTCTCACTTGGACACTCTCCTTGCTAGCATAGCTGAAACCGAGAAACAAACTGAACTAGCTGCTCGCGTTTCAACATGGAAACAAAAAGTAGAGTACAACTTGGAAGAGCAAGAATCACACCCTGCTTTTGATATTCATGACTATGGAGAAAGAATTCTTGATAGACTATCCTTCGAACCAGACAATGAGAATGTCTTGTCATTTGCTGATGTTGTAAAAGGTCAGGAAAAGTATGATGTCGCTCGGAGTTTTTCTGCGCTCCTGCAACTGGTTAACAATGGAGACGTTGAGTTGAATAGGAGTGGGGTTGATGGTGAGTCCGTTTGTTACACAGCTGCGAATCCCTTCCATGTTCAGCTCCTTAGGCATGACAAGAGAAGAGAGCAAACTGGATTTCGGTTGTCCAGAAAGAGAGTTAAGTCTCCCTTGAGGAAAGCATCTCGAAATGTGGACAACGGCAACACAGGAACTGAGAAATCTCCTTCAGTCAAGTCATCTTCTAAGGCACGTAAATCAACAGAGACATCTCCTCAAATAAACGGCAAGTTACCTGTGAAAGTTGGAAATGTTGGTGGCAAACGGTGCACTCCTGAAGCCAAGCGGAGAAGAAAGTCTCGATTTGTTGGACCAGTTGACCTACATTCTGTAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000793 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006282 GO:0008150 GO:0009893 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045739 GO:0045935 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0080134 GO:0080135 GO:2001020 GO:2001022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CNDH2_C CNDH2_M CNDH2_N

Protein Analysis

691

Amino Acids

76.53

Weight (kDa)

4.93

Isoelectric Point (pI)

46.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CNDH2_N	PF06278	21 - 136	1.4e-40	Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNDH2_M	PF16869	159 - 307	1.6e-25	Condensin II complex subunit CAP-H2 or CNDH2, mid domain
CNDH2_C	PF16858	467 - 602	4.9e-42	Condensin II complex subunit CAP-H2 or CNDH2, C-terminal wHTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16730
fragaria_vesca	FvH4_4g18640 FvH4_4g18640 FvH4_4g18640
malus_domestica	MD13G1164900.v1.1 MD16G1164600.v1.1
prunus_persica	Prupe.1G123900_v2.0.a1
pyrus_communis	pycom13g14100 pycom16g13930
rosa_chinensis	RchiOBHm_Chr4g0423341
rosa_laevigata	RLG00000007567
rosa_multiflora	Rmu_sc0001290.1_g000016
rosa_roxburghii	Rroxscaffold_5G00365530
rosa_rugosa	Rorug04G0186700.1 Rorug04G0186800
rosa_samantha	Rh4AG245900 Rh4BG251300 Rh4CG259700 Rh4DG246200
rosa_wichuraiana	Rw4G021130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1066
Acc36I	ACCTGC	1 cut(s)	1066
AccII	CGCG	1 cut(s)	1485
AciI	CCGC	4 cut(s)	39, 45, 54, 2020
AclWI	GGATC	8 cut(s)	590, 749, 762, 818, 923, 1202, 1255, 1376
AcoI	YGGCCR	1 cut(s)	558
AcsI	RAATTY	2 cut(s)	1298, 1572
AcuI	CTGAAG	4 cut(s)	186, 360, 1887, 2031
AfaI	GTAC	5 cut(s)	260, 856, 1075, 1314, 1514
AfiI	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1229, 1271, 1355, 1687
AgsI	TTSAA	7 cut(s)	218, 970, 1018, 1163, 1367, 1491, 1714
AjiI	CACGTC	1 cut(s)	1033
AjnI	CCWGG	3 cut(s)	893, 958, 1401
AloI	GAACNNNNNNTCC	2 cut(s)	315, 347
AluBI	AGCT	9 cut(s)	203, 396, 998, 1090, 1168, 1451, 1478, 1754, 1777
AluI	AGCT	9 cut(s)	203, 396, 998, 1090, 1168, 1451, 1478, 1754, 1777
Alw21I	GWGCWC	3 cut(s)	501, 1092, 2006
Alw26I	GTCTC	7 cut(s)	9, 1039, 1123, 1695, 1845, 1934, 2037
Alw44I	GTGCAC	1 cut(s)	2002
AlwI	GGATC	8 cut(s)	590, 749, 762, 818, 923, 1202, 1255, 1376
AlwNI	CAGNNNCTG	3 cut(s)	203, 1286, 1889
AoxI	GGCC	2 cut(s)	175, 558
ApaLI	GTGCAC	1 cut(s)	2002
ApeKI	GCWGC	5 cut(s)	203, 208, 304, 1478, 1754
ApoI	RAATTY	2 cut(s)	1298, 1572
AseI	ATTAAT	2 cut(s)	189, 765
Asp700I	GAANNNNTTC	2 cut(s)	1572, 1763
AspLEI	GCGC	2 cut(s)	208, 1678
AspS9I	GGNCC	5 cut(s)	226, 818, 1140, 1346, 2045
AsuC2I	CCSGG	1 cut(s)	24
AsuHPI	GGTGA	5 cut(s)	164, 518, 539, 667, 1745
AsuII	TTCGAA	1 cut(s)	1593
AsuNHI	GCTAGC	1 cut(s)	1442
AvaII	GGWCC	5 cut(s)	226, 818, 1140, 1346, 2045
AxyI	CCTNAGG	1 cut(s)	1781
BaeGI	GKGCMC	1 cut(s)	2006
BalI	TGGCCA	1 cut(s)	560
BamHI	GGATCC	1 cut(s)	754
BanII	GRGCYC	2 cut(s)	894, 1092
Bbv12I	GWGCWC	3 cut(s)	501, 1092, 2006
BbvCI	CCTCAGC	1 cut(s)	679
BbvI	GCAGC	5 cut(s)	190, 195, 316, 1465, 1741
BccI	CCATC	6 cut(s)	448, 632, 845, 914, 1223, 1724
BceAI	ACGGC	3 cut(s)	1334, 1891, 1975
BciT130I	CCWGG	3 cut(s)	895, 960, 1403
BciVI	GTATCC	1 cut(s)	1234
BcnI	CCSGG	1 cut(s)	24
BcoDI	GTCTC	7 cut(s)	9, 1039, 1123, 1695, 1845, 1934, 2037
BfaI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
BfmI	CTRYAG	2 cut(s)	609, 2064
BfuAI	ACCTGC	1 cut(s)	1066
BfuI	GTATCC	1 cut(s)	1234
BisI	GCNGC	5 cut(s)	204, 209, 305, 1479, 1755
BlsI	GCNGC	5 cut(s)	205, 210, 306, 1480, 1756
Bme1390I	CCNGG	4 cut(s)	24, 895, 960, 1403
Bme18I	GGWCC	5 cut(s)	226, 818, 1140, 1346, 2045
BmgBI	CACGTC	1 cut(s)	1033
BmgT120I	GGNCC	5 cut(s)	226, 818, 1140, 1346, 2045
BmiI	GGNNCC	3 cut(s)	756, 1141, 1142
BmrFI	CCNGG	4 cut(s)	24, 895, 960, 1403
BmsI	GCATC	4 cut(s)	442, 595, 1273, 1865
BmtI	GCTAGC	1 cut(s)	1446
BoxI	GACNNNNGTC	1 cut(s)	1344
Bpu10I	CCTNAGC	1 cut(s)	679
Bpu14I	TTCGAA	1 cut(s)	1593
BpuEI	CTTGAG	2 cut(s)	122, 1867
BpuMI	CCSGG	1 cut(s)	24
BsaAI	YACGTR	1 cut(s)	1928
BsaBI	GATNNNNATC	2 cut(s)	573, 1386
BsaJI	CCNNGG	6 cut(s)	893, 894, 932, 959, 1122, 1316
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	2 cut(s)	242, 272
Bsc4I	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1229, 1271, 1355, 1687
Bse1I	ACTGG	4 cut(s)	529, 1692, 1813, 2048
Bse21I	CCTNAGG	1 cut(s)	1781
Bse3DI	GCAATG	2 cut(s)	405, 844
Bse8I	GATNNNNATC	2 cut(s)	573, 1386
BseBI	CCWGG	3 cut(s)	895, 960, 1403
BseDI	CCNNGG	6 cut(s)	893, 894, 932, 959, 1122, 1316
BseGI	GGATG	5 cut(s)	643, 880, 910, 1234, 1312
BseJI	GATNNNNATC	2 cut(s)	573, 1386
BseLI	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1229, 1271, 1355, 1687
BseMI	GCAATG	2 cut(s)	405, 844
BseMII	CTCAG	3 cut(s)	693, 872, 1881
BseNI	ACTGG	4 cut(s)	529, 1692, 1813, 2048
BseRI	GAGGAG	4 cut(s)	447, 1139, 1140, 1938
BseSI	GKGCMC	1 cut(s)	2006
BseXI	GCAGC	5 cut(s)	190, 195, 316, 1465, 1741
BseYI	CCCAGC	1 cut(s)	481
BsgI	GTGCAG	1 cut(s)	708
Bsh1236I	CGCG	1 cut(s)	1485
BshFI	GGCC	2 cut(s)	177, 560
BsiHKAI	GWGCWC	3 cut(s)	501, 1092, 2006
BsiSI	CCGG	3 cut(s)	23, 150, 241
BslFI	GGGAC	2 cut(s)	911, 1126
BslI	CCNNNNNNNGG	8 cut(s)	247, 300, 344, 782, 1229, 1271, 1355, 1687
BsmAI	GTCTC	7 cut(s)	9, 1039, 1123, 1695, 1845, 1934, 2037
BsmBI	CGTCTC	3 cut(s)	9, 1039, 1695
BsmFI	GGGAC	2 cut(s)	911, 1126
BsnI	GGCC	2 cut(s)	177, 560
Bsp119I	TTCGAA	1 cut(s)	1593
Bsp1286I	GDGCHC	4 cut(s)	501, 894, 1092, 2006
Bsp143I	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
Bsp19I	CCATGG	1 cut(s)	932
BspACI	CCGC	4 cut(s)	39, 45, 54, 2020
BspANI	GGCC	2 cut(s)	177, 560
BspCNI	CTCAG	3 cut(s)	692, 871, 1882
BspFNI	CGCG	1 cut(s)	1485
BspHI	TCATGA	1 cut(s)	1555
BspLI	GGNNCC	3 cut(s)	756, 1141, 1142
BspMI	ACCTGC	1 cut(s)	1066
BspOI	GCTAGC	1 cut(s)	1446
BspPI	GGATC	8 cut(s)	590, 749, 762, 818, 923, 1202, 1255, 1376
BspQI	GCTCTTC	1 cut(s)	1518
BspT104I	TTCGAA	1 cut(s)	1593
BsrDI	GCAATG	2 cut(s)	405, 844
BsrI	ACTGG	4 cut(s)	529, 1692, 1813, 2048
BssECI	CCNNGG	6 cut(s)	893, 894, 932, 959, 1122, 1316
BssMI	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
BssT1I	CCWWGG	1 cut(s)	932
Bst2UI	CCWGG	3 cut(s)	895, 960, 1403
Bst4CI	ACNGT	4 cut(s)	1050, 1325, 1343, 2001
Bst6I	CTCTTC	6 cut(s)	120, 442, 744, 1186, 1518, 1792
BstAPI	GCANNNNNTGC	2 cut(s)	203, 2001
BstBAI	YACGTR	1 cut(s)	1928
BstBI	TTCGAA	1 cut(s)	1593
BstC8I	GCNNGC	7 cut(s)	72, 276, 558, 835, 1399, 1444, 1483
BstDEI	CTNAG	8 cut(s)	397, 430, 679, 858, 1026, 1781, 1890, 1920
BstDSI	CCRYGG	2 cut(s)	932, 1316
BstEII	GGTNACC	1 cut(s)	673
BstENI	CCTNNNNNAGG	1 cut(s)	342
BstF5I	GGATG	5 cut(s)	643, 880, 910, 1234, 1312
BstFNI	CGCG	1 cut(s)	1485
BstHHI	GCGC	2 cut(s)	208, 1678
BstKTI	GATC	9 cut(s)	109, 571, 598, 757, 826, 931, 1210, 1263, 1384
BstMAI	GTCTC	7 cut(s)	9, 1039, 1123, 1695, 1845, 1934, 2037
BstMBI	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
BstMWI	GCNNNNNNNGC	7 cut(s)	51, 76, 203, 416, 1448, 1783, 2001
BstNI	CCWGG	3 cut(s)	895, 960, 1403
BstPAI	GACNNNNGTC	1 cut(s)	1344
BstPI	GGTNACC	1 cut(s)	673
BstSCI	CCNGG	4 cut(s)	22, 893, 958, 1401
BstSFI	CTRYAG	2 cut(s)	609, 2064
BstSLI	GKGCMC	1 cut(s)	2006
BstUI	CGCG	1 cut(s)	1485
BstV1I	GCAGC	5 cut(s)	190, 195, 316, 1465, 1741
BstX2I	RGATCY	3 cut(s)	595, 754, 1260
BstXI	CCANNNNNNTGG	2 cut(s)	901, 959
BstYI	RGATCY	3 cut(s)	595, 754, 1260
Bsu36I	CCTNAGG	1 cut(s)	1781
BsuI	GTATCC	1 cut(s)	1234
BsuRI	GGCC	2 cut(s)	177, 560
BtgI	CCRYGG	2 cut(s)	932, 1316
BtrI	CACGTC	1 cut(s)	1033
BtsCI	GGATG	5 cut(s)	643, 880, 910, 1234, 1312
BtsI	GCAGTG	1 cut(s)	417
BtsIMutI	CAGTG	6 cut(s)	162, 417, 941, 1046, 1330, 1348
BveI	ACCTGC	1 cut(s)	1066
Cac8I	GCNNGC	7 cut(s)	72, 276, 558, 835, 1399, 1444, 1483
CaiI	CAGNNNCTG	3 cut(s)	203, 1286, 1889
CciI	TCATGA	1 cut(s)	1555
CfoI	GCGC	2 cut(s)	208, 1678
Cfr13I	GGNCC	5 cut(s)	226, 818, 1140, 1346, 2045
Csp6I	GTAC	5 cut(s)	259, 855, 1074, 1313, 1513
CviQI	GTAC	5 cut(s)	259, 855, 1074, 1313, 1513
DdeI	CTNAG	8 cut(s)	397, 430, 679, 858, 1026, 1781, 1890, 1920
DpnI	GATC	9 cut(s)	108, 570, 597, 756, 825, 930, 1209, 1262, 1383
DpnII	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
EaeI	YGGCCR	1 cut(s)	558
Eam1104I	CTCTTC	6 cut(s)	120, 442, 744, 1186, 1518, 1792
EarI	CTCTTC	6 cut(s)	120, 442, 744, 1186, 1518, 1792
EciI	GGCGGA	1 cut(s)	69
Ecl136II	GAGCTC	1 cut(s)	1090
Eco130I	CCWWGG	1 cut(s)	932
Eco24I	GRGCYC	2 cut(s)	894, 1092
Eco47I	GGWCC	5 cut(s)	226, 818, 1140, 1346, 2045
Eco53kI	GAGCTC	1 cut(s)	1090
Eco57I	CTGAAG	4 cut(s)	186, 360, 1887, 2031
Eco81I	CCTNAGG	1 cut(s)	1781
Eco91I	GGTNACC	1 cut(s)	673
EcoICRI	GAGCTC	1 cut(s)	1090
EcoNI	CCTNNNNNAGG	1 cut(s)	342
EcoO109I	RGGNCCY	1 cut(s)	1140
EcoO65I	GGTNACC	1 cut(s)	673
EcoRI	GAATTC	2 cut(s)	1298, 1572
EcoRII	CCWGG	3 cut(s)	893, 958, 1401
EcoT14I	CCWWGG	1 cut(s)	932
EcoT38I	GRGCYC	2 cut(s)	894, 1092
ErhI	CCWWGG	1 cut(s)	932
Esp3I	CGTCTC	3 cut(s)	9, 1039, 1695
FalI	AAGNNNNNCTT	4 cut(s)	413, 445, 1829, 1861
FaqI	GGGAC	2 cut(s)	911, 1126
FauI	CCCGC	1 cut(s)	32
Fnu4HI	GCNGC	5 cut(s)	204, 209, 305, 1479, 1755
FokI	GGATG	5 cut(s)	650, 887, 917, 1241, 1319
FriOI	GRGCYC	2 cut(s)	894, 1092
Fsp4HI	GCNGC	5 cut(s)	204, 209, 305, 1479, 1755
FspBI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
GlaI	GCGC	2 cut(s)	207, 1677
GluI	GCNGC	5 cut(s)	204, 209, 305, 1479, 1755
GsaI	CCCAGC	1 cut(s)	485
HaeIII	GGCC	2 cut(s)	177, 560
HapII	CCGG	3 cut(s)	23, 150, 241
HhaI	GCGC	2 cut(s)	208, 1678
Hin6I	GCGC	2 cut(s)	206, 1676
HinP1I	GCGC	2 cut(s)	206, 1676
HincII	GTYRAC	2 cut(s)	1693, 2053
HindII	GTYRAC	2 cut(s)	1693, 2053
HpaI	GTTAAC	1 cut(s)	1693
HpaII	CCGG	3 cut(s)	23, 150, 241
HphI	GGTGA	5 cut(s)	164, 518, 539, 667, 1745
Hpy166II	GTNNAC	4 cut(s)	1693, 1870, 2004, 2053
Hpy188I	TCNGA	9 cut(s)	319, 370, 462, 536, 699, 889, 913, 995, 1665
Hpy8I	GTNNAC	4 cut(s)	1693, 1870, 2004, 2053
Hpy99I	CGWCG	1 cut(s)	1382
HpyAV	CCTTC	8 cut(s)	167, 238, 314, 338, 497, 1600, 1774, 1911
HpyCH4III	ACNGT	4 cut(s)	1050, 1325, 1343, 2001
HpyCH4IV	ACGT	4 cut(s)	709, 1032, 1704, 1927
HpyF10VI	GCNNNNNNNGC	7 cut(s)	51, 76, 203, 416, 1448, 1783, 2001
HpyF3I	CTNAG	8 cut(s)	397, 430, 679, 858, 1026, 1781, 1890, 1920
HpySE526I	ACGT	4 cut(s)	709, 1032, 1704, 1927
HspAI	GCGC	2 cut(s)	206, 1676
KflI	GGGWCCC	1 cut(s)	1140
KspAI	GTTAAC	1 cut(s)	1693
Kzo9I	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
LguI	GCTCTTC	1 cut(s)	1518
LmnI	GCTCC	5 cut(s)	152, 393, 460, 1683, 1782
Lsp1109I	GCAGC	5 cut(s)	190, 195, 316, 1465, 1741
LweI	GCATC	4 cut(s)	442, 595, 1273, 1865
MaeI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
MaeII	ACGT	4 cut(s)	709, 1032, 1704, 1927
MaeIII	GTNAC	4 cut(s)	80, 673, 1745, 1965
MalI	GATC	9 cut(s)	108, 570, 597, 756, 825, 930, 1209, 1262, 1383
MboI	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
MfeI	CAATTG	1 cut(s)	94
MflI	RGATCY	3 cut(s)	595, 754, 1260
MhlI	GDGCHC	4 cut(s)	501, 894, 1092, 2006
MlsI	TGGCCA	1 cut(s)	560
MluNI	TGGCCA	1 cut(s)	560
MlyI	GAGTC	2 cut(s)	694, 1745
MmeI	TCCRAC	2 cut(s)	1960, 2023
Mox20I	TGGCCA	1 cut(s)	560
MroXI	GAANNNNTTC	2 cut(s)	1572, 1763
MscI	TGGCCA	1 cut(s)	560
MseI	TTAA	6 cut(s)	189, 648, 765, 1185, 1692, 1836
MslI	CAYNNNNRTG	3 cut(s)	410, 1097, 1560
Msp20I	TGGCCA	1 cut(s)	560
MspA1I	CMGCKG	2 cut(s)	39, 1754
MspI	CCGG	3 cut(s)	23, 150, 241
MspR9I	CCNGG	4 cut(s)	24, 895, 960, 1403
MunI	CAATTG	1 cut(s)	94
MvaI	CCWGG	3 cut(s)	895, 960, 1403
MvnI	CGCG	1 cut(s)	1485
MwoI	GCNNNNNNNGC	7 cut(s)	51, 76, 203, 416, 1448, 1783, 2001
NciI	CCSGG	1 cut(s)	24
NcoI	CCATGG	1 cut(s)	932
NdeII	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
NheI	GCTAGC	1 cut(s)	1442
NlaIV	GGNNCC	3 cut(s)	756, 1141, 1142
NmeAIII	GCCGAG	1 cut(s)	1147
NmuCI	GTSAC	2 cut(s)	80, 673
NspV	TTCGAA	1 cut(s)	1593
PagI	TCATGA	1 cut(s)	1555
PaqCI	CACCTGC	1 cut(s)	1066
PasI	CCCWGGG	1 cut(s)	894
PciSI	GCTCTTC	1 cut(s)	1518
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PdmI	GAANNNNTTC	2 cut(s)	1572, 1763
PkrI	GCNGC	5 cut(s)	205, 210, 306, 1480, 1756
PleI	GAGTC	2 cut(s)	694, 1744
PpsI	GAGTC	2 cut(s)	694, 1744
Ppu21I	YACGTR	1 cut(s)	1928
PpuMI	RGGWCCY	1 cut(s)	1140
PshAI	GACNNNNGTC	1 cut(s)	1344
PshBI	ATTAAT	2 cut(s)	189, 765
Psp124BI	GAGCTC	1 cut(s)	1092
Psp5II	RGGWCCY	1 cut(s)	1140
Psp6I	CCWGG	3 cut(s)	893, 958, 1401
PspEI	GGTNACC	1 cut(s)	673
PspFI	CCCAGC	1 cut(s)	481
PspGI	CCWGG	3 cut(s)	893, 958, 1401
PspN4I	GGNNCC	3 cut(s)	756, 1141, 1142
PspPI	GGNCC	5 cut(s)	226, 818, 1140, 1346, 2045
PspPPI	RGGWCCY	1 cut(s)	1140
PstNI	CAGNNNCTG	3 cut(s)	203, 1286, 1889
PsuI	RGATCY	3 cut(s)	595, 754, 1260
PvuII	CAGCTG	1 cut(s)	1754
RsaI	GTAC	5 cut(s)	260, 856, 1075, 1314, 1514
RsaNI	GTAC	5 cut(s)	259, 855, 1074, 1313, 1513
RseI	CAYNNNNRTG	3 cut(s)	410, 1097, 1560
SacI	GAGCTC	1 cut(s)	1092
SapI	GCTCTTC	1 cut(s)	1518
SaqAI	TTAA	6 cut(s)	189, 648, 765, 1185, 1692, 1836
SatI	GCNGC	5 cut(s)	204, 209, 305, 1479, 1755
Sau3AI	GATC	9 cut(s)	106, 568, 595, 754, 823, 928, 1207, 1260, 1381
Sau96I	GGNCC	5 cut(s)	226, 818, 1140, 1346, 2045
SchI	GAGTC	2 cut(s)	694, 1745
ScrFI	CCNGG	4 cut(s)	24, 895, 960, 1403
SduI	GDGCHC	4 cut(s)	501, 894, 1092, 2006
SfaNI	GCATC	4 cut(s)	442, 595, 1273, 1865
SfcI	CTRYAG	2 cut(s)	609, 2064
SfuI	TTCGAA	1 cut(s)	1593
SinI	GGWCC	5 cut(s)	226, 818, 1140, 1346, 2045
SmiMI	CAYNNNNRTG	3 cut(s)	410, 1097, 1560
SmlI	CTYRAG	2 cut(s)	137, 1846
SmoI	CTYRAG	2 cut(s)	137, 1846
SsiI	CCGC	4 cut(s)	39, 45, 54, 2020
SspI	AATATT	2 cut(s)	763, 814
SspMI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475
SstI	GAGCTC	1 cut(s)	1092
StyD4I	CCNGG	4 cut(s)	22, 893, 958, 1401
StyI	CCWWGG	1 cut(s)	932
TaaI	ACNGT	4 cut(s)	1050, 1325, 1343, 2001
TaiI	ACGT	4 cut(s)	712, 1035, 1707, 1930
TaqI	TCGA	8 cut(s)	105, 123, 334, 501, 1111, 1593, 1861, 2035
TaqII	GACCGA	1 cut(s)	214
TatI	WGTACW	2 cut(s)	258, 1512
Tru1I	TTAA	6 cut(s)	189, 648, 765, 1185, 1692, 1836
Tru9I	TTAA	6 cut(s)	189, 648, 765, 1185, 1692, 1836
TscAI	CASTG	6 cut(s)	169, 417, 948, 1053, 1330, 1348
TseFI	GTSAC	2 cut(s)	80, 673
TseI	GCWGC	5 cut(s)	203, 208, 304, 1478, 1754
Tsp45I	GTSAC	2 cut(s)	80, 673
TspDTI	ATGAA	9 cut(s)	50, 324, 387, 574, 731, 969, 1291, 1346, 1544
TspGWI	ACGGA	1 cut(s)	1729
TspRI	CASTG	6 cut(s)	169, 417, 948, 1053, 1330, 1348
VneI	GTGCAC	1 cut(s)	2002
VpaK11BI	GGWCC	5 cut(s)	226, 818, 1140, 1346, 2045
VspI	ATTAAT	2 cut(s)	189, 765
XagI	CCTNNNNNAGG	1 cut(s)	342
XapI	RAATTY	2 cut(s)	1298, 1572
XmnI	GAANNNNTTC	2 cut(s)	1572, 1763
XspI	CTAG	5 cut(s)	86, 491, 515, 1443, 1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.