Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0003114

Physical Location & Seq

Genomic Coordinates Reverse (-)

17469148 .. 17474253

Gene Structure 5106 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1198200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGGCAACGCAGACTACGAGTGCCCACGCCATGTCGAAATTCCTCCTTCCAAGTCATTTTTCAAGGCTCTGAAATCATCTCTGAAAGAAACTTTCTTTCCCGATGACCCTTTCAGGCAATTTAAGAACCAACCCACATCTAGAAAACTTGTTCTAGGATTGCAACACTTTGTGCCAATCATCGAATGGGCTCCTCGCTACACTTTTGACTTCTTCAAATCTGATCTCATTTCTGGAATCACCATTGCCAGTCTTGCAGTTCCTCAAGGGATCAGCTATGCAAATTTAGCAAACTTGCCCCCAATTATTGGCCTATATTCGAGCTTTGTGCCTCCATTGGTGTATGCCATGCTTGGAAGTTCAAAAGATTTGGCAGTGGGTACTCTGGCGGTTGCATCCCTCCTCATATCTTCCATGTTGGGGAAGGTTGTTAGCCCTACTGAGAACCCTAAGCTCTACTTTCAGTTGGCTCTCACCTCTACCTTCTTTGCTGGAGCTTTCCAGGCTTCTCTTGGCTTCTTAAGACTTGGGTTTGTCGTGGACTTTCTGTCTCATGCAACAATAGTGGGTTTCATGGGTGGAGCAGCCACTGTTGTATGTCTCCAGCAGCTTAAAGGGGTACTAGGGTTGATTCATTTCACTCATGAGACAGATGTTATATCTGTCATGAAATCTATCTTTTCTCAAGTGCACAAGTGGAGGTGGGAAACTGCTGTGCTGGGATGCTGTTTCCTCTTCTTTCTATTGCTCACAAGATACTTTAGCAAGAGAAAACCGGCCTTCTTTTGGATAAACGCAATGATGCCACTGTGCTCTGTGATCTTGGGAAGCCTTCTGGTTTTTCTAACCCATGCTGAAAAACATGGCGTTCTAGTAATTGGACACCTTAAAAAAGGGTTGAACCCGCCATCCGTGTCTGACTTGGCTTTCGGGTCGCCATATCTTTCAACAGCCATTAAAACTGGGATCGTCACTGGTGTCATCGGCCTTGCTGAAGGAGTAGCTGTCGGAAGAAGTTTTGCTGCGTTTAAAAACTACCATATTGACGGTAACAAAGAAATGATCGCTTTCGGGATGATGAACATTGCAGGCTCTTGCACTTCTTGCTACTTGACCGGCGGACCGTTTTCGCGAACTGCAGTGAACTTCAATGCAGGATGCAAAACTGCAGTCTCCAACATTGTAATGGCGACTGCAGTGATGTTTACACTCTTGTTTTTGACGCCATTGTTCCATTACACTCCACTTGTGGTGCTCTCCGCCATTATAATGGCAGCCATGCTTGGCCTCATCGATTACGAAGCCGTCATCCATCTCTGGAAAGTAGACAAGGTGGACTGCATTGTGTGCCTGGGTGCATACTTTGGCGTTGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATTGCAGTTGCAGTTTCACTGCTAAGGGTTCTGCTATTCGTGGCGAGGCCAAGGACTTTCGCTTTAGGCAACATTCCAAACTCGTCGATTTATAGAAGCATTGATCAGTACCCGGTTGCGAACAATATTCCAGGAGTTCTTATTCTTCAAATTGATGCACCAATCTACTTTGCTAATGCAAACTATTTAAGGGAAAGAATCTCAAGATGGATATACGAGGAGGAAGACAAGATAAAATCTTGTGGACAAACAAGTTTACACTATGTTATACTAGACATTGGTACGGTTGGAAGCATCGATACGAGCGGGATCACCATGCTTGAAGAGGTCCAGAAAAATGTTGATAGAAAGGGTCTCAAGCTTGTAATAGCAAACCCCCGAAGCGAGGTGATCAAGAAGCTCGACAAGTCCAAGTTCATCGAGAAAATCGGTCAGGAATGGATCTATCTTACAGTGGCAGAGGCTGTATCGGCATGTAACTTCACGCTACACACCTGCAAACCGAATCCAGGAGAAATAGACGGAAACAGACACGATGACAGTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0009507 GO:0009536 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

650

Amino Acids

71.09

Weight (kDa)

8.78

Isoelectric Point (pI)

34.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfate_transp	PF00916	72 - 451	6.2e-136	Sulfate permease family
STAS	PF01740	504 - 622	9e-28	STAS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51895 AT3G51895 AT4G02700
fragaria_vesca	FvH4_2g23100 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920
malus_domestica	MD03G1259900.v1.1 MD11G1280200.v1.1 MD13G1198200.v1.1 MD16G1198300.v1.1
prunus_persica	Prupe.1G019900_v2.0.a1 Prupe.8G236100_v2.0.a1
pyrus_communis	pycom03g20760 pycom11g24790
rosa_chinensis	RchiOBHm_Chr4g0387511 RchiOBHm_Chr6g0290261
rosa_laevigata	RLG00000010116 RLG00000012230
rosa_multiflora	Rmu_sc0002902.1_g000006 Rmu_sc0011414.1_g000006
rosa_roxburghii	Rroxscaffold_5G00334190 Rroxscaffold_7G00177200
rosa_rugosa	Rorug03G0310300 Rorug06G0211200 Rorug06G0211300
rosa_samantha	Rh4AG016400 Rh4BG011100 Rh4CG017600 Rh4DG012300 Rh6AG321600 Rh6BG328800 Rh6CG334800 Rh6DG321700
rosa_wichuraiana	Rw4G001050 Rw6G027780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1268
AarI	CACCTGC	1 cut(s)	1904
Acc36I	ACCTGC	1 cut(s)	1904
AccB7I	CCANNNNNTGG	1 cut(s)	308
AccBSI	CCGCTC	1 cut(s)	1707
AccI	GTMKAC	1 cut(s)	1326
AccII	CGCG	1 cut(s)	1132
AciI	CCGC	5 cut(s)	389, 905, 1119, 1260, 1707
AclWI	GGATC	4 cut(s)	278, 974, 1718, 1850
AcsI	RAATTY	2 cut(s)	39, 283
AcuI	CTGAAG	1 cut(s)	1014
AcyI	GRCGYC	1 cut(s)	1223
AdeI	CACNNNGTG	1 cut(s)	172
AfaI	GTAC	4 cut(s)	382, 621, 1511, 1684
AfiI	CCNNNNNNNGG	5 cut(s)	308, 420, 786, 1786, 1910
AflII	CTTAAG	1 cut(s)	520
AgsI	TTSAA	9 cut(s)	64, 217, 363, 901, 948, 1150, 1388, 1550, 1724
AhdI	GACNNNNNGTC	1 cut(s)	547
AjnI	CCWGG	4 cut(s)	501, 1350, 1531, 1909
AjuI	GAANNNNNNNTTGG	2 cut(s)	44, 76
AloI	GAACNNNNNNTCC	2 cut(s)	893, 925
AluBI	AGCT	8 cut(s)	276, 324, 454, 497, 610, 1004, 1762, 1801
AluI	AGCT	8 cut(s)	276, 324, 454, 497, 610, 1004, 1762, 1801
Alw21I	GWGCWC	3 cut(s)	693, 815, 1257
Alw26I	GTCTC	5 cut(s)	555, 605, 641, 1177, 1760
Alw44I	GTGCAC	1 cut(s)	689
AlwI	GGATC	4 cut(s)	278, 974, 1718, 1850
AlwNI	CAGNNNCTG	2 cut(s)	590, 1865
AoxI	GGCC	6 cut(s)	310, 777, 985, 1285, 1393, 1448
ApaLI	GTGCAC	1 cut(s)	689
ApeKI	GCWGC	4 cut(s)	584, 607, 1022, 1274
ApoI	RAATTY	2 cut(s)	39, 283
ArsI	GACNNNNNNTTYG	4 cut(s)	911, 943, 1155, 1187
AspS9I	GGNCC	2 cut(s)	1121, 1729
AsuC2I	CCSGG	1 cut(s)	1514
AsuHPI	GGTGA	4 cut(s)	232, 466, 1705, 1801
AvaII	GGWCC	2 cut(s)	1121, 1729
BaeGI	GKGCMC	2 cut(s)	26, 693
BaeI	ACNNNNGTAYC	2 cut(s)	611, 644
BanII	GRGCYC	1 cut(s)	193
BarI	GAAGNNNNNNTAC	2 cut(s)	1684, 1716
BbsI	GAAGAC	1 cut(s)	1632
Bbv12I	GWGCWC	3 cut(s)	693, 815, 1257
BbvI	GCAGC	4 cut(s)	596, 619, 1009, 1286
BccI	CCATC	3 cut(s)	916, 1320, 1602
BceAI	ACGGC	1 cut(s)	1289
BcgI	CGANNNNNNTGC	2 cut(s)	310, 344
BciT130I	CCWGG	4 cut(s)	503, 1352, 1533, 1911
BclI	TGATCA	2 cut(s)	1504, 1791
BcnI	CCSGG	1 cut(s)	1514
BcoDI	GTCTC	5 cut(s)	555, 605, 641, 1177, 1760
BfaI	CTAG	6 cut(s)	141, 155, 623, 872, 1397, 1673
BfmI	CTRYAG	3 cut(s)	1137, 1167, 1194
BfrI	CTTAAG	1 cut(s)	520
BfuAI	ACCTGC	1 cut(s)	1904
BisI	GCNGC	4 cut(s)	585, 608, 1023, 1275
BlsI	GCNGC	4 cut(s)	586, 609, 1024, 1276
Bme1390I	CCNGG	5 cut(s)	503, 1352, 1514, 1533, 1911
Bme18I	GGWCC	2 cut(s)	1121, 1729
BmeRI	GACNNNNNGTC	1 cut(s)	547
BmgT120I	GGNCC	2 cut(s)	1121, 1729
BmiI	GGNNCC	1 cut(s)	192
BmrFI	CCNGG	5 cut(s)	503, 1352, 1514, 1533, 1911
BmrI	ACTGGG	1 cut(s)	972
BmsI	GCATC	6 cut(s)	404, 713, 792, 1148, 1546, 1704
BmuI	ACTGGG	1 cut(s)	972
BpiI	GAAGAC	1 cut(s)	1632
BpmI	CTGGAG	2 cut(s)	513, 587
Bpu10I	CCTNAGC	2 cut(s)	450, 1424
BpuEI	CTTGAG	4 cut(s)	249, 669, 1588, 1742
BpuMI	CCSGG	1 cut(s)	1514
Bsa29I	ATCGAT	2 cut(s)	1293, 1698
BsaHI	GRCGYC	1 cut(s)	1223
BsaI	GGTCTC	1 cut(s)	1760
BsaJI	CCNNGG	2 cut(s)	1351, 1451
BsaXI	ACNNNNNCTCC	2 cut(s)	990, 1020
Bsc4I	CCNNNNNNNGG	5 cut(s)	308, 420, 786, 1786, 1910
Bse118I	RCCGGY	2 cut(s)	775, 1115
Bse1I	ACTGG	3 cut(s)	249, 967, 979
Bse3DI	GCAATG	4 cut(s)	243, 804, 1083, 1401
BseBI	CCWGG	4 cut(s)	503, 1352, 1533, 1911
BseCI	ATCGAT	2 cut(s)	1293, 1698
BseDI	CCNNGG	2 cut(s)	1351, 1451
BseGI	GGATG	6 cut(s)	395, 728, 908, 1080, 1163, 1308
BseLI	CCNNNNNNNGG	5 cut(s)	308, 420, 786, 1786, 1910
BseMI	GCAATG	4 cut(s)	243, 804, 1083, 1401
BseMII	CTCAG	1 cut(s)	432
BseNI	ACTGG	3 cut(s)	249, 967, 979
BseRI	GAGGAG	3 cut(s)	183, 392, 1634
BseSI	GKGCMC	2 cut(s)	26, 693
BseXI	GCAGC	4 cut(s)	596, 619, 1009, 1286
BseYI	CCCAGC	1 cut(s)	718
Bsh1236I	CGCG	1 cut(s)	1132
BshFI	GGCC	6 cut(s)	312, 779, 987, 1287, 1395, 1450
BshVI	ATCGAT	2 cut(s)	1293, 1698
BsiHKAI	GWGCWC	3 cut(s)	693, 815, 1257
BsiSI	CCGG	3 cut(s)	776, 1116, 1514
BslI	CCNNNNNNNGG	5 cut(s)	308, 420, 786, 1786, 1910
BsmAI	GTCTC	5 cut(s)	555, 605, 641, 1177, 1760
BsnI	GGCC	6 cut(s)	312, 779, 987, 1287, 1395, 1450
Bso31I	GGTCTC	1 cut(s)	1760
Bsp1286I	GDGCHC	5 cut(s)	26, 193, 693, 815, 1257
Bsp143I	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
Bsp68I	TCGCGA	1 cut(s)	1132
BspACI	CCGC	5 cut(s)	389, 905, 1119, 1260, 1707
BspANI	GGCC	6 cut(s)	312, 779, 987, 1287, 1395, 1450
BspCNI	CTCAG	1 cut(s)	433
BspDI	ATCGAT	2 cut(s)	1293, 1698
BspFNI	CGCG	1 cut(s)	1132
BspHI	TCATGA	2 cut(s)	643, 666
BspLI	GGNNCC	1 cut(s)	192
BspMAI	CTGCAG	3 cut(s)	1141, 1171, 1198
BspMI	ACCTGC	1 cut(s)	1904
BspPI	GGATC	4 cut(s)	278, 974, 1718, 1850
BspTI	CTTAAG	1 cut(s)	520
BspTNI	GGTCTC	1 cut(s)	1760
BsrBI	CCGCTC	1 cut(s)	1707
BsrDI	GCAATG	4 cut(s)	243, 804, 1083, 1401
BsrFI	RCCGGY	2 cut(s)	775, 1115
BsrI	ACTGG	3 cut(s)	249, 967, 979
BssAI	RCCGGY	2 cut(s)	775, 1115
BssECI	CCNNGG	2 cut(s)	1351, 1451
BssMI	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
BssNI	GRCGYC	1 cut(s)	1223
BssT1I	CCWWGG	1 cut(s)	1451
Bst2UI	CCWGG	4 cut(s)	503, 1352, 1533, 1911
Bst4CI	ACNGT	7 cut(s)	592, 810, 1049, 1125, 1687, 1855, 1943
Bst6I	CTCTTC	2 cut(s)	740, 1719
BstACI	GRCGYC	1 cut(s)	1223
BstAFI	CTTAAG	1 cut(s)	520
BstAPI	GCANNNNNTGC	2 cut(s)	1104, 1347
BstC8I	GCNNGC	1 cut(s)	1090
BstDEI	CTNAG	3 cut(s)	441, 450, 1424
BstF5I	GGATG	6 cut(s)	395, 728, 908, 1080, 1163, 1308
BstFNI	CGCG	1 cut(s)	1132
BstKTI	GATC	9 cut(s)	226, 273, 822, 969, 1065, 1507, 1713, 1794, 1845
BstMAI	GTCTC	5 cut(s)	555, 605, 641, 1177, 1760
BstMBI	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
BstMWI	GCNNNNNNNGC	6 cut(s)	254, 287, 503, 1104, 1347, 1871
BstNI	CCWGG	4 cut(s)	503, 1352, 1533, 1911
BstNSI	RCATGY	1 cut(s)	1878
BstSCI	CCNGG	5 cut(s)	501, 1350, 1512, 1531, 1909
BstSFI	CTRYAG	3 cut(s)	1137, 1167, 1194
BstSLI	GKGCMC	2 cut(s)	26, 693
BstUI	CGCG	1 cut(s)	1132
BstV1I	GCAGC	4 cut(s)	596, 619, 1009, 1286
BstV2I	GAAGAC	1 cut(s)	1632
BstX2I	RGATCY	1 cut(s)	1842
BstXI	CCANNNNNNTGG	1 cut(s)	1270
BstYI	RGATCY	1 cut(s)	1842
Bsu15I	ATCGAT	2 cut(s)	1293, 1698
BsuRI	GGCC	6 cut(s)	312, 779, 987, 1287, 1395, 1450
BsuTUI	ATCGAT	2 cut(s)	1293, 1698
BtsCI	GGATG	6 cut(s)	395, 728, 908, 1080, 1163, 1308
BtsI	GCAGTG	5 cut(s)	381, 1146, 1203, 1387, 1418
BtuMI	TCGCGA	1 cut(s)	1132
BveI	ACCTGC	1 cut(s)	1904
Cac8I	GCNNGC	1 cut(s)	1090
CaiI	CAGNNNCTG	2 cut(s)	590, 1865
CciI	TCATGA	2 cut(s)	643, 666
Cfr10I	RCCGGY	2 cut(s)	775, 1115
Cfr13I	GGNCC	2 cut(s)	1121, 1729
ClaI	ATCGAT	2 cut(s)	1293, 1698
CpoI	CGGWCCG	1 cut(s)	1121
CseI	GACGC	1 cut(s)	1231
Csp6I	GTAC	4 cut(s)	381, 620, 1510, 1683
CspCI	CAANNNNNGTGG	2 cut(s)	546, 581
CspI	CGGWCCG	1 cut(s)	1121
CviQI	GTAC	4 cut(s)	381, 620, 1510, 1683
DdeI	CTNAG	3 cut(s)	441, 450, 1424
DpnI	GATC	9 cut(s)	225, 272, 821, 968, 1064, 1506, 1712, 1793, 1844
DpnII	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
DraI	TTTAAA	1 cut(s)	1030
DraIII	CACNNNGTG	1 cut(s)	172
DriI	GACNNNNNGTC	1 cut(s)	547
Eam1104I	CTCTTC	2 cut(s)	740, 1719
Eam1105I	GACNNNNNGTC	1 cut(s)	547
EarI	CTCTTC	2 cut(s)	740, 1719
EciI	GGCGGA	2 cut(s)	1134, 1249
Eco130I	CCWWGG	1 cut(s)	1451
Eco24I	GRGCYC	1 cut(s)	193
Eco31I	GGTCTC	1 cut(s)	1760
Eco47I	GGWCC	2 cut(s)	1121, 1729
Eco57I	CTGAAG	1 cut(s)	1014
EcoRII	CCWGG	4 cut(s)	501, 1350, 1531, 1909
EcoT14I	CCWWGG	1 cut(s)	1451
EcoT38I	GRGCYC	1 cut(s)	193
ErhI	CCWWGG	1 cut(s)	1451
FalI	AAGNNNNNCTT	2 cut(s)	443, 475
FauI	CCCGC	2 cut(s)	912, 1700
FbaI	TGATCA	2 cut(s)	1504, 1791
FblI	GTMKAC	1 cut(s)	1326
Fnu4HI	GCNGC	4 cut(s)	585, 608, 1023, 1275
FokI	GGATG	6 cut(s)	382, 735, 895, 1087, 1170, 1295
FriOI	GRGCYC	1 cut(s)	193
Fsp4HI	GCNGC	4 cut(s)	585, 608, 1023, 1275
FspBI	CTAG	6 cut(s)	141, 155, 623, 872, 1397, 1673
GluI	GCNGC	4 cut(s)	585, 608, 1023, 1275
GsaI	CCCAGC	1 cut(s)	722
GsuI	CTGGAG	2 cut(s)	513, 587
HaeIII	GGCC	6 cut(s)	312, 779, 987, 1287, 1395, 1450
HapII	CCGG	3 cut(s)	776, 1116, 1514
HgaI	GACGC	1 cut(s)	1231
Hin1I	GRCGYC	1 cut(s)	1223
HindIII	AAGCTT	1 cut(s)	1760
HinfI	GANTC	4 cut(s)	237, 631, 1599, 1906
HpaII	CCGG	3 cut(s)	776, 1116, 1514
HphI	GGTGA	4 cut(s)	232, 466, 1705, 1801
Hpy166II	GTNNAC	8 cut(s)	541, 691, 1144, 1206, 1327, 1336, 1646, 1658
Hpy188I	TCNGA	5 cut(s)	72, 84, 223, 919, 1010
Hpy8I	GTNNAC	8 cut(s)	541, 691, 1144, 1206, 1327, 1336, 1646, 1658
Hpy99I	CGWCG	1 cut(s)	1489
HpyAV	CCTTC	6 cut(s)	57, 418, 493, 790, 842, 989
HpyCH4III	ACNGT	7 cut(s)	592, 810, 1049, 1125, 1687, 1855, 1943
HpyF10VI	GCNNNNNNNGC	6 cut(s)	254, 287, 503, 1104, 1347, 1871
HpyF3I	CTNAG	3 cut(s)	441, 450, 1424
Hsp92I	GRCGYC	1 cut(s)	1223
Ksp22I	TGATCA	2 cut(s)	1504, 1791
Kzo9I	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
LmnI	GCTCC	3 cut(s)	196, 494, 581
Lsp1109I	GCAGC	4 cut(s)	596, 619, 1009, 1286
LweI	GCATC	6 cut(s)	404, 713, 792, 1148, 1546, 1704
MaeI	CTAG	6 cut(s)	141, 155, 623, 872, 1397, 1673
MaeIII	GTNAC	3 cut(s)	970, 1049, 1877
MalI	GATC	9 cut(s)	225, 272, 821, 968, 1064, 1506, 1712, 1793, 1844
MbiI	CCGCTC	1 cut(s)	1707
MboI	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
MboII	GAAGA	7 cut(s)	205, 402, 727, 1023, 1538, 1637, 1736
MflI	RGATCY	1 cut(s)	1842
MhlI	GDGCHC	5 cut(s)	26, 193, 693, 815, 1257
MluCI	AATT	7 cut(s)	39, 119, 283, 303, 876, 1389, 1551
MmeI	TCCRAC	3 cut(s)	988, 1200, 1669
MseI	TTAA	7 cut(s)	123, 521, 612, 888, 957, 1029, 1589
MslI	CAYNNNNRTG	2 cut(s)	1184, 1268
MspCI	CTTAAG	1 cut(s)	520
MspI	CCGG	3 cut(s)	776, 1116, 1514
MspR9I	CCNGG	5 cut(s)	503, 1352, 1514, 1533, 1911
MvaI	CCWGG	4 cut(s)	503, 1352, 1533, 1911
MvnI	CGCG	1 cut(s)	1132
MwoI	GCNNNNNNNGC	6 cut(s)	254, 287, 503, 1104, 1347, 1871
NciI	CCSGG	1 cut(s)	1514
NdeII	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
NlaIV	GGNNCC	1 cut(s)	192
NmuCI	GTSAC	1 cut(s)	970
NruI	TCGCGA	1 cut(s)	1132
NspI	RCATGY	1 cut(s)	1878
PagI	TCATGA	2 cut(s)	643, 666
PaqCI	CACCTGC	1 cut(s)	1904
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PfeI	GAWTC	4 cut(s)	237, 631, 1599, 1906
PflFI	GACNNNGTC	1 cut(s)	1943
PflMI	CCANNNNNTGG	1 cut(s)	308
PfoI	TCCNGGA	2 cut(s)	1531, 1909
PkrI	GCNGC	4 cut(s)	586, 609, 1024, 1276
PsiI	TTATAA	1 cut(s)	1268
Psp6I	CCWGG	4 cut(s)	501, 1350, 1531, 1909
PspFI	CCCAGC	1 cut(s)	718
PspGI	CCWGG	4 cut(s)	501, 1350, 1531, 1909
PspN4I	GGNNCC	1 cut(s)	192
PspPI	GGNCC	2 cut(s)	1121, 1729
PstI	CTGCAG	3 cut(s)	1141, 1171, 1198
PstNI	CAGNNNCTG	2 cut(s)	590, 1865
PsuI	RGATCY	1 cut(s)	1842
PsyI	GACNNNGTC	1 cut(s)	1943
RruI	TCGCGA	1 cut(s)	1132
RsaI	GTAC	4 cut(s)	382, 621, 1511, 1684
RsaNI	GTAC	4 cut(s)	381, 620, 1510, 1683
RseI	CAYNNNNRTG	2 cut(s)	1184, 1268
Rsr2I	CGGWCCG	1 cut(s)	1121
RsrII	CGGWCCG	1 cut(s)	1121
SaqAI	TTAA	7 cut(s)	123, 521, 612, 888, 957, 1029, 1589
SatI	GCNGC	4 cut(s)	585, 608, 1023, 1275
Sau3AI	GATC	9 cut(s)	223, 270, 819, 966, 1062, 1504, 1710, 1791, 1842
Sau96I	GGNCC	2 cut(s)	1121, 1729
ScrFI	CCNGG	5 cut(s)	503, 1352, 1514, 1533, 1911
SduI	GDGCHC	5 cut(s)	26, 193, 693, 815, 1257
SfaNI	GCATC	6 cut(s)	404, 713, 792, 1148, 1546, 1704
SfcI	CTRYAG	3 cut(s)	1137, 1167, 1194
SinI	GGWCC	2 cut(s)	1121, 1729
SmiMI	CAYNNNNRTG	2 cut(s)	1184, 1268
SmlI	CTYRAG	5 cut(s)	264, 520, 684, 1603, 1757
SmoI	CTYRAG	5 cut(s)	264, 520, 684, 1603, 1757
Sse9I	AATT	7 cut(s)	39, 119, 283, 303, 876, 1389, 1551
SsiI	CCGC	5 cut(s)	389, 905, 1119, 1260, 1707
SspI	AATATT	1 cut(s)	1528
SspMI	CTAG	6 cut(s)	141, 155, 623, 872, 1397, 1673
StyD4I	CCNGG	5 cut(s)	501, 1350, 1512, 1531, 1909
StyI	CCWWGG	1 cut(s)	1451
TaaI	ACNGT	7 cut(s)	592, 810, 1049, 1125, 1687, 1855, 1943
TaqI	TCGA	8 cut(s)	36, 183, 320, 1293, 1487, 1698, 1803, 1821
TaqII	GACCGA	1 cut(s)	1820
TasI	AATT	7 cut(s)	39, 119, 283, 303, 876, 1389, 1551
TfiI	GAWTC	4 cut(s)	237, 631, 1599, 1906
Tru1I	TTAA	7 cut(s)	123, 521, 612, 888, 957, 1029, 1589
Tru9I	TTAA	7 cut(s)	123, 521, 612, 888, 957, 1029, 1589
TseFI	GTSAC	1 cut(s)	970
TseI	GCWGC	4 cut(s)	584, 607, 1022, 1274
Tsp45I	GTSAC	1 cut(s)	970
TspDTI	ATGAA	5 cut(s)	562, 623, 683, 1094, 1807
TspGWI	ACGGA	2 cut(s)	901, 1938
Tth111I	GACNNNGTC	1 cut(s)	1943
Van91I	CCANNNNNTGG	1 cut(s)	308
Vha464I	CTTAAG	1 cut(s)	520
VneI	GTGCAC	1 cut(s)	689
VpaK11BI	GGWCC	2 cut(s)	1121, 1729
XapI	RAATTY	2 cut(s)	39, 283
XbaI	TCTAGA	1 cut(s)	140
XceI	RCATGY	1 cut(s)	1878
XcmI	CCANNNNNNNNNTGG	3 cut(s)	183, 509, 1183
XmiI	GTMKAC	1 cut(s)	1326
XspI	CTAG	6 cut(s)	141, 155, 623, 872, 1397, 1673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.