Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003114

Physical Location & Seq

Genomic Coordinates Reverse (-)

33115139 .. 33117337

Gene Structure 2199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0310300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGGGGGGAATGGGGAAAACAACTCTTGCTCAACTTGTTTATAATGATGAAAATGTCAAATCTCATTTTGACAAGAGAATATGGGTCTGTGTCTCGGACCCTTTTGAAGAGATCAAGATTGCTCAAGCTATCATTGAAGAAATAGATAAAGATAATAGTTCAAAAAGCTCAAATGTGTTGCAAACCCTGACGCAATGTATAGATAAATTGATTGAGGGTAAAAAGTTTCTCCTAGTTTTAGATGATGTTTGGAGCCCAAACTCTGATCAATGGGAAGAATTGATCAAACCTTTACGTAATGGTGGTATAGGAAGTAGAATATTGGTGACCACTAGAAAGGAGGAGGTTGTTACTTTAATGAAAGCAACAACTCAATTGATCCATTTGAAGGAGTTGGGTGAAGCATTTTGTTTGTCATTGTTCTATTACAGTGCAGACATGGATGAGAGTAGTGTGTCCACCGAGTTTAAAAATATTGGATCAGAGATTGTGAAAAGGTGCAATGGGTTGCCTCTTGCTGCAAAGACATTAGGAAGCCTCATGCGTAATAAGAAAAAGATTCATGAATGGCAAGCTGTTTTAAAGAATATTGAGGATGTTCAGTTTGAGTATGGAAACATAAAATGCAAAATTCATGATATTGTACATGACTTTCTACAATATTTGACAGAAAATGAATGTTTGATTTTGGATTTTGAGTTGGATGCTAGTAAGAGAAGAGATGTGTCAAAGGATAAAGTTCATCATTTGACCTTAGTGCATGCAACCGAGGGTGATTCTCTGCAAACTTTTCTCCCTAATTATAAAAAATTACGTACCTTGATAGCTATACAATCATCCGAATATTCCATTGGCCCAATATTTGAGTTGATAGTACAATTGAAATGCCTTAGAACATTAGACTTGCGTGGTTGGCGGGGGAAGGGTTGTCTCAAAGAAATTCGCGAGACGATATGTGGATTGATACATTTGAGGTATCTCGATTTATCCGAGAATTTGGGGTTGGATGAATTACCCAGCGCCCTGGGCAGCTTATACAACCTGCAAACCTTGCGACTTGTTCGTTGCGTGAATCTGAAAAAAGTAGATGTCCGAAGGCTGATTAACTTGAGGCATCTTTATGTTGAAGGCTGTTGGGAGCTAAAGTTAATTGAAGGGATTGAGAAATTAACAGATCTGCAAAGGCTAGATCAGTTTGTTGTCCCAATTATCGGTGGTGATGAAGGAAACAAGTTGGAACATCTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTGCTATTCATATTCTGGGAAATCCAAATATGGCGGAGAATGTAGCAGGAATCATGGTGAATAAGGCTCACCTCCTGGAATTGAGACTAGAGTTTTACTCGGTTGATGAAGGAAAGCATGGAGAAATTATGAATGGCTTAGAGCCCCATCCAGATTTGGAATCTTTATACATCTGGTTTTATAAAGGTGGCGCCTTCTCCCATTGGTTGTCGTATTTACACAGCTTGAGAATGCTCATCCTTGAGACTTGCACGGAATGTGGGGTTTTGCCTCCTTTAGGGAAACTGGCGTCCCTTGAATCATTGCATATTGTGCAACTCCATGGAGTCTCAAAGGTAGGAGTTGAGTTTTTGGGAATAGATGATGGGCAAACCTCCTCCTCCTCGTCTTCCATTTTCATATCATTCCCCAAGCTTAAACAACTCGGCTTCTACAACATGGGGGCATGGGAAGAGTGGGTAGGAGTGGAAAATAATAATATTACAATCATGCCATGCCTCTCTCAATTGACAATTGGGTACTGCTACAAGCTAAAAGCACTGCCGGACTTCCTGTGGGAGACACCACTACAGAAATTGCACATCTTTAGATCTCCAATTCTCCAAGACCTTTACAGACAAGGAATAAGTGAGAAGTGGGCCAAGATCCCAACCATCGTGATAGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0009507 GO:0009536 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

647

Amino Acids

73.58

Weight (kDa)

5.91

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	1 - 144	1.6e-31	NB-ARC domain
LRR_14	PF23598	271 - 596	1.4e-22	Leucine-rich repeat region
LRR_R13L1-DRL21	PF25019	412 - 530	1e-25	R13L1/DRL21 LRRs

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51895 AT3G51895 AT4G02700
fragaria_vesca	FvH4_2g23100 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920
malus_domestica	MD03G1259900.v1.1 MD11G1280200.v1.1 MD13G1198200.v1.1 MD16G1198300.v1.1
prunus_persica	Prupe.1G019900_v2.0.a1 Prupe.8G236100_v2.0.a1
pyrus_communis	pycom03g20760 pycom11g24790
rosa_chinensis	RchiOBHm_Chr4g0387511 RchiOBHm_Chr6g0290261
rosa_laevigata	RLG00000010116 RLG00000012230
rosa_multiflora	Rmu_sc0002902.1_g000006 Rmu_sc0011414.1_g000006
rosa_roxburghii	Rroxscaffold_5G00334190 Rroxscaffold_7G00177200
rosa_rugosa	Rorug03G0310300 Rorug06G0211200 Rorug06G0211300
rosa_samantha	Rh4AG016400 Rh4BG011100 Rh4CG017600 Rh4DG012300 Rh6AG321600 Rh6BG328800 Rh6CG334800 Rh6DG321700
rosa_wichuraiana	Rw4G001050 Rw6G027780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	42, 804, 1455
Acc36I	ACCTGC	1 cut(s)	1050
AccB1I	GGYRCC	1 cut(s)	1463
AccII	CGCG	1 cut(s)	945
AciI	CCGC	2 cut(s)	916, 1307
AclWI	GGATC	3 cut(s)	373, 487, 1912
AcsI	RAATTY	3 cut(s)	630, 939, 994
AcyI	GRCGYC	2 cut(s)	1464, 1562
AfaI	GTAC	4 cut(s)	645, 817, 876, 1793
AfiI	CCNNNNNNNGG	3 cut(s)	388, 1211, 1550
AjnI	CCWGG	2 cut(s)	1023, 1347
AjuI	GAANNNNNNNTTGG	4 cut(s)	834, 866, 986, 1018
Alw26I	GTCTC	7 cut(s)	97, 935, 941, 1351, 1511, 1606, 1826
AlwI	GGATC	3 cut(s)	373, 487, 1912
AoxI	GGCC	2 cut(s)	853, 1911
ApeKI	GCWGC	2 cut(s)	518, 1029
ApoI	RAATTY	3 cut(s)	630, 939, 994
AspLEI	GCGC	2 cut(s)	1022, 1466
AspS9I	GGNCC	3 cut(s)	97, 854, 1911
AsuHPI	GGTGA	6 cut(s)	337, 410, 785, 1229, 1334, 1342
AvaII	GGWCC	1 cut(s)	97
BanI	GGYRCC	1 cut(s)	1463
BanII	GRGCYC	2 cut(s)	257, 1419
BbsI	GAAGAC	1 cut(s)	1653
BbvI	GCAGC	2 cut(s)	505, 1041
BccI	CCATC	3 cut(s)	1428, 1631, 1934
BciT130I	CCWGG	2 cut(s)	1025, 1349
BclI	TGATCA	2 cut(s)	265, 282
BcoDI	GTCTC	7 cut(s)	97, 935, 941, 1351, 1511, 1606, 1826
BfaI	CTAG	5 cut(s)	233, 333, 708, 1187, 1361
BfmI	CTRYAG	1 cut(s)	1841
BfoI	RGCGCY	2 cut(s)	1023, 1467
BfuAI	ACCTGC	1 cut(s)	1050
BglII	AGATCT	2 cut(s)	1174, 1862
BisI	GCNGC	2 cut(s)	519, 1030
BlsI	GCNGC	2 cut(s)	520, 1031
Bme1390I	CCNGG	2 cut(s)	1025, 1349
Bme18I	GGWCC	1 cut(s)	97
BmgT120I	GGNCC	3 cut(s)	97, 854, 1911
BmiI	GGNNCC	3 cut(s)	99, 254, 1465
BmrFI	CCNGG	2 cut(s)	1025, 1349
BmsI	GCATC	2 cut(s)	694, 1123
BpiI	GAAGAC	1 cut(s)	1653
BplI	GAGNNNNNCTC	2 cut(s)	1355, 1387
BpuEI	CTTGAG	4 cut(s)	108, 1129, 1519, 1535
BsaAI	YACGTR	2 cut(s)	296, 815
BsaHI	GRCGYC	2 cut(s)	1464, 1562
BsaJI	CCNNGG	4 cut(s)	768, 1023, 1024, 1594
BsaXI	ACNNNNNCTCC	2 cut(s)	1130, 1160
Bsc4I	CCNNNNNNNGG	3 cut(s)	388, 1211, 1550
Bse1I	ACTGG	1 cut(s)	1563
Bse3DI	GCAATG	3 cut(s)	200, 508, 1574
BseBI	CCWGG	2 cut(s)	1025, 1349
BseDI	CCNNGG	4 cut(s)	768, 1023, 1024, 1594
BseGI	GGATG	7 cut(s)	448, 601, 709, 836, 1012, 1420, 1509
BseLI	CCNNNNNNNGG	3 cut(s)	388, 1211, 1550
BseMI	GCAATG	3 cut(s)	200, 508, 1574
BseNI	ACTGG	1 cut(s)	1563
BseRI	GAGGAG	4 cut(s)	356, 1639, 1642, 1645
BseXI	GCAGC	2 cut(s)	505, 1041
BseYI	CCCAGC	1 cut(s)	1016
BsgI	GTGCAG	1 cut(s)	453
Bsh1236I	CGCG	1 cut(s)	945
BshFI	GGCC	2 cut(s)	855, 1913
BshNI	GGYRCC	1 cut(s)	1463
BsiSI	CCGG	1 cut(s)	1817
BslFI	GGGAC	2 cut(s)	1187, 1549
BslI	CCNNNNNNNGG	3 cut(s)	388, 1211, 1550
BsmAI	GTCTC	7 cut(s)	97, 935, 941, 1351, 1511, 1606, 1826
BsmBI	CGTCTC	1 cut(s)	941
BsmFI	GGGAC	2 cut(s)	1187, 1549
BsmI	GAATGC	1 cut(s)	1509
BsnI	GGCC	2 cut(s)	855, 1913
Bsp1286I	GDGCHC	2 cut(s)	257, 1419
Bsp1407I	TGTACA	1 cut(s)	643
Bsp143I	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
Bsp19I	CCATGG	1 cut(s)	1594
Bsp68I	TCGCGA	1 cut(s)	945
BspACI	CCGC	2 cut(s)	916, 1307
BspANI	GGCC	2 cut(s)	855, 1913
BspFNI	CGCG	1 cut(s)	945
BspHI	TCATGA	2 cut(s)	562, 634
BspLI	GGNNCC	3 cut(s)	99, 254, 1465
BspMI	ACCTGC	1 cut(s)	1050
BspPI	GGATC	3 cut(s)	373, 487, 1912
BspT107I	GGYRCC	1 cut(s)	1463
BsrDI	GCAATG	3 cut(s)	200, 508, 1574
BsrGI	TGTACA	1 cut(s)	643
BsrI	ACTGG	1 cut(s)	1563
BssECI	CCNNGG	4 cut(s)	768, 1023, 1024, 1594
BssMI	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
BssNI	GRCGYC	2 cut(s)	1464, 1562
BssT1I	CCWWGG	1 cut(s)	1594
Bst2UI	CCWGG	2 cut(s)	1025, 1349
Bst4CI	ACNGT	1 cut(s)	431
Bst6I	CTCTTC	3 cut(s)	102, 712, 1719
BstACI	GRCGYC	2 cut(s)	1464, 1562
BstAPI	GCANNNNNTGC	2 cut(s)	1051, 1585
BstAUI	TGTACA	1 cut(s)	643
BstBAI	YACGTR	2 cut(s)	296, 815
BstC8I	GCNNGC	2 cut(s)	573, 762
BstDEI	CTNAG	3 cut(s)	754, 890, 1411
BstDSI	CCRYGG	1 cut(s)	1594
BstEII	GGTNACC	1 cut(s)	325
BstENI	CCTNNNNNAGG	1 cut(s)	1548
BstF5I	GGATG	7 cut(s)	448, 601, 709, 836, 1012, 1420, 1509
BstFNI	CGCG	1 cut(s)	945
BstH2I	RGCGCY	2 cut(s)	1023, 1467
BstHHI	GCGC	2 cut(s)	1022, 1466
BstKTI	GATC	9 cut(s)	114, 268, 285, 381, 482, 1177, 1192, 1865, 1920
BstMAI	GTCTC	7 cut(s)	97, 935, 941, 1351, 1511, 1606, 1826
BstMBI	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
BstMWI	GCNNNNNNNGC	4 cut(s)	913, 1026, 1051, 1585
BstNI	CCWGG	2 cut(s)	1025, 1349
BstNSI	RCATGY	1 cut(s)	764
BstPI	GGTNACC	1 cut(s)	325
BstSCI	CCNGG	2 cut(s)	1023, 1347
BstSFI	CTRYAG	1 cut(s)	1841
BstSNI	TACGTA	2 cut(s)	296, 815
BstUI	CGCG	1 cut(s)	945
BstV1I	GCAGC	2 cut(s)	505, 1041
BstV2I	GAAGAC	1 cut(s)	1653
BstX2I	RGATCY	3 cut(s)	1174, 1862, 1917
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	3 cut(s)	1174, 1862, 1917
BsuRI	GGCC	2 cut(s)	855, 1913
BtgI	CCRYGG	1 cut(s)	1594
BtsCI	GGATG	7 cut(s)	448, 601, 709, 836, 1012, 1420, 1509
BtsI	GCAGTG	1 cut(s)	1811
BtsIMutI	CAGTG	2 cut(s)	436, 1811
BtuMI	TCGCGA	1 cut(s)	945
BveI	ACCTGC	1 cut(s)	1050
Cac8I	GCNNGC	2 cut(s)	573, 762
CciI	TCATGA	2 cut(s)	562, 634
CfoI	GCGC	2 cut(s)	1022, 1466
Cfr13I	GGNCC	3 cut(s)	97, 854, 1911
CseI	GACGC	2 cut(s)	199, 1551
Csp6I	GTAC	4 cut(s)	644, 816, 875, 1792
CviQI	GTAC	4 cut(s)	644, 816, 875, 1792
DdeI	CTNAG	3 cut(s)	754, 890, 1411
DinI	GGCGCC	1 cut(s)	1465
DpnI	GATC	9 cut(s)	113, 267, 284, 380, 481, 1176, 1191, 1864, 1919
DpnII	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
DraI	TTTAAA	2 cut(s)	469, 582
Eam1104I	CTCTTC	3 cut(s)	102, 712, 1719
EarI	CTCTTC	3 cut(s)	102, 712, 1719
EciI	GGCGGA	1 cut(s)	1322
Eco105I	TACGTA	2 cut(s)	296, 815
Eco130I	CCWWGG	1 cut(s)	1594
Eco24I	GRGCYC	2 cut(s)	257, 1419
Eco47I	GGWCC	1 cut(s)	97
Eco91I	GGTNACC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1548
EcoO65I	GGTNACC	1 cut(s)	325
EcoRII	CCWGG	2 cut(s)	1023, 1347
EcoT14I	CCWWGG	1 cut(s)	1594
EcoT38I	GRGCYC	2 cut(s)	257, 1419
EgeI	GGCGCC	1 cut(s)	1465
EheI	GGCGCC	1 cut(s)	1465
ErhI	CCWWGG	1 cut(s)	1594
Esp3I	CGTCTC	1 cut(s)	941
FalI	AAGNNNNNCTT	2 cut(s)	1257, 1289
FaqI	GGGAC	2 cut(s)	1187, 1549
FauI	CCCGC	1 cut(s)	909
FbaI	TGATCA	2 cut(s)	265, 282
Fnu4HI	GCNGC	2 cut(s)	519, 1030
FokI	GGATG	7 cut(s)	455, 608, 716, 823, 1019, 1407, 1496
FriOI	GRGCYC	2 cut(s)	257, 1419
Fsp4HI	GCNGC	2 cut(s)	519, 1030
FspBI	CTAG	5 cut(s)	233, 333, 708, 1187, 1361
GlaI	GCGC	2 cut(s)	1021, 1465
GluI	GCNGC	2 cut(s)	519, 1030
GsaI	CCCAGC	1 cut(s)	1020
HaeII	RGCGCY	2 cut(s)	1023, 1467
HaeIII	GGCC	2 cut(s)	855, 1913
HapII	CCGG	1 cut(s)	1817
HgaI	GACGC	2 cut(s)	199, 1551
HhaI	GCGC	2 cut(s)	1022, 1466
Hin1I	GRCGYC	2 cut(s)	1464, 1562
Hin6I	GCGC	2 cut(s)	1020, 1464
HinP1I	GCGC	2 cut(s)	1020, 1464
HindIII	AAGCTT	1 cut(s)	1685
HinfI	GANTC	8 cut(s)	559, 776, 1072, 1270, 1323, 1433, 1571, 1599
HpaII	CCGG	1 cut(s)	1817
HphI	GGTGA	6 cut(s)	337, 410, 785, 1229, 1334, 1342
Hpy166II	GTNNAC	1 cut(s)	459
Hpy188I	TCNGA	8 cut(s)	97, 265, 484, 841, 991, 1077, 1094, 1245
Hpy188III	TCNNGA	7 cut(s)	115, 563, 635, 944, 980, 1424, 1930
Hpy8I	GTNNAC	1 cut(s)	459
HpyAV	CCTTC	8 cut(s)	382, 916, 1089, 1121, 1148, 1217, 1376, 1477
HpyCH4III	ACNGT	1 cut(s)	431
HpyCH4IV	ACGT	2 cut(s)	295, 814
HpyF10VI	GCNNNNNNNGC	4 cut(s)	913, 1026, 1051, 1585
HpyF3I	CTNAG	3 cut(s)	754, 890, 1411
HpySE526I	ACGT	2 cut(s)	295, 814
Hsp92I	GRCGYC	2 cut(s)	1464, 1562
HspAI	GCGC	2 cut(s)	1020, 1464
KasI	GGCGCC	1 cut(s)	1463
Ksp22I	TGATCA	2 cut(s)	265, 282
Kzo9I	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
LmnI	GCTCC	2 cut(s)	252, 1138
Lsp1109I	GCAGC	2 cut(s)	505, 1041
LweI	GCATC	2 cut(s)	694, 1123
MaeI	CTAG	5 cut(s)	233, 333, 708, 1187, 1361
MaeII	ACGT	2 cut(s)	295, 814
MaeIII	GTNAC	2 cut(s)	325, 349
MalI	GATC	9 cut(s)	113, 267, 284, 380, 481, 1176, 1191, 1864, 1919
MboI	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
MboII	GAAGA	6 cut(s)	119, 149, 287, 729, 1653, 1736
MfeI	CAATTG	4 cut(s)	374, 878, 1778, 1785
MflI	RGATCY	3 cut(s)	1174, 1862, 1917
MhlI	GDGCHC	2 cut(s)	257, 1419
Mly113I	GGCGCC	1 cut(s)	1464
MlyI	GAGTC	2 cut(s)	1279, 1608
MmeI	TCCRAC	3 cut(s)	681, 984, 1215
MseI	TTAA	7 cut(s)	356, 468, 581, 1104, 1148, 1169, 1689
MslI	CAYNNNNRTG	1 cut(s)	1119
MspI	CCGG	1 cut(s)	1817
MspR9I	CCNGG	2 cut(s)	1025, 1349
MunI	CAATTG	4 cut(s)	374, 878, 1778, 1785
Mva1269I	GAATGC	1 cut(s)	1509
MvaI	CCWGG	2 cut(s)	1025, 1349
MvnI	CGCG	1 cut(s)	945
MwoI	GCNNNNNNNGC	4 cut(s)	913, 1026, 1051, 1585
NarI	GGCGCC	1 cut(s)	1464
NcoI	CCATGG	1 cut(s)	1594
NdeII	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
NlaIV	GGNNCC	3 cut(s)	99, 254, 1465
NmeAIII	GCCGAG	1 cut(s)	1677
NmuCI	GTSAC	1 cut(s)	325
NruI	TCGCGA	1 cut(s)	945
NspI	RCATGY	1 cut(s)	764
PaeI	GCATGC	1 cut(s)	764
PagI	TCATGA	2 cut(s)	562, 634
PasI	CCCWGGG	1 cut(s)	1024
PcsI	WCGNNNNNNNCGW	1 cut(s)	987
PctI	GAATGC	1 cut(s)	1509
PfeI	GAWTC	6 cut(s)	559, 776, 1072, 1323, 1433, 1571
PfoI	TCCNGGA	1 cut(s)	1347
PkrI	GCNGC	2 cut(s)	520, 1031
PleI	GAGTC	2 cut(s)	1278, 1607
PluTI	GGCGCC	1 cut(s)	1467
PpsI	GAGTC	2 cut(s)	1278, 1607
Ppu21I	YACGTR	2 cut(s)	296, 815
PsiI	TTATAA	3 cut(s)	42, 804, 1455
Psp6I	CCWGG	2 cut(s)	1023, 1347
PspEI	GGTNACC	1 cut(s)	325
PspFI	CCCAGC	1 cut(s)	1016
PspGI	CCWGG	2 cut(s)	1023, 1347
PspN4I	GGNNCC	3 cut(s)	99, 254, 1465
PspPI	GGNCC	3 cut(s)	97, 854, 1911
PsuI	RGATCY	3 cut(s)	1174, 1862, 1917
RruI	TCGCGA	1 cut(s)	945
RsaI	GTAC	4 cut(s)	645, 817, 876, 1793
RsaNI	GTAC	4 cut(s)	644, 816, 875, 1792
RseI	CAYNNNNRTG	1 cut(s)	1119
SaqAI	TTAA	7 cut(s)	356, 468, 581, 1104, 1148, 1169, 1689
SatI	GCNGC	2 cut(s)	519, 1030
Sau3AI	GATC	9 cut(s)	111, 265, 282, 378, 479, 1174, 1189, 1862, 1917
Sau96I	GGNCC	3 cut(s)	97, 854, 1911
SchI	GAGTC	2 cut(s)	1279, 1608
ScrFI	CCNGG	2 cut(s)	1025, 1349
SduI	GDGCHC	2 cut(s)	257, 1419
SfaNI	GCATC	2 cut(s)	694, 1123
SfcI	CTRYAG	1 cut(s)	1841
SfoI	GGCGCC	1 cut(s)	1465
SinI	GGWCC	1 cut(s)	97
SmiMI	CAYNNNNRTG	1 cut(s)	1119
SmlI	CTYRAG	4 cut(s)	123, 1108, 1498, 1514
SmoI	CTYRAG	4 cut(s)	123, 1108, 1498, 1514
SnaBI	TACGTA	2 cut(s)	296, 815
SphI	GCATGC	1 cut(s)	764
SsiI	CCGC	2 cut(s)	916, 1307
SspDI	GGCGCC	1 cut(s)	1463
SspI	AATATT	7 cut(s)	321, 475, 589, 662, 845, 861, 1753
SspMI	CTAG	5 cut(s)	233, 333, 708, 1187, 1361
StyD4I	CCNGG	2 cut(s)	1023, 1347
StyI	CCWWGG	1 cut(s)	1594
TaaI	ACNGT	1 cut(s)	431
TaiI	ACGT	2 cut(s)	298, 817
TaqI	TCGA	1 cut(s)	981
TatI	WGTACW	2 cut(s)	643, 874
TfiI	GAWTC	6 cut(s)	559, 776, 1072, 1323, 1433, 1571
Tru1I	TTAA	7 cut(s)	356, 468, 581, 1104, 1148, 1169, 1689
Tru9I	TTAA	7 cut(s)	356, 468, 581, 1104, 1148, 1169, 1689
TscAI	CASTG	2 cut(s)	436, 1818
TseFI	GTSAC	1 cut(s)	325
TseI	GCWGC	2 cut(s)	518, 1029
Tsp45I	GTSAC	1 cut(s)	325
TspGWI	ACGGA	1 cut(s)	1541
TspRI	CASTG	2 cut(s)	436, 1818
VpaK11BI	GGWCC	1 cut(s)	97
XagI	CCTNNNNNAGG	1 cut(s)	1548
XapI	RAATTY	3 cut(s)	630, 939, 994
XceI	RCATGY	1 cut(s)	764
XspI	CTAG	5 cut(s)	233, 333, 708, 1187, 1361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.