Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003114

Physical Location & Seq

Genomic Coordinates Forward (+)

52190413 .. 52196376

Gene Structure 5964 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG321600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGGGAACGTGGATTACGTGTACCCTCCGGCGAATGTGGAGGCGTCCCCCCGAGTGGCTATTCCGCCGCCGCAGCCGTTCATCACGACGATCAAGAACTCCCTGAAGGAGACGTTCTTCCCGGACGACCCTCTCAGGCAGTTCAAGAACCAACCTGCTTCCAGAAAACTAGTCCTCGGACTCCAGTATGTGTTCCCCATCTTTGAGTGGGGCCCGCGTTACACGCTGGACTTCCTCAAGTCCGATCTCATTTCCGGCATCACCATCGCCAGCCTCGCCATCCCTCAGGGTATCAGCTACGCCAAGCTGGCGAACTTGCCTCCGATTCTCGGCCTCTATTCGAGCTTTATTCCACCATTGGTTTACGCCATGATGGGGAGCTCTAGAGATTTGGCTGTGGGGACGGTGGCCGTGGCCTCACTTCTCACGGCTTCAATGCTTGGAGCTGAGGTCAATGCTACTGAGAATCCCACTCTCTATCTTCACCTGGCTTTCACGGCGACCTTCTTCGCAGGAGTTTTCCAAGCTTTGTTGGGTTTGTTTAGGCTTGGATTTATCGTGGATTTCTTATCACATGCAACCATAATAGGGTTCATGGCGGGGGCAGCCACCGTGGTCTGTCTGCAACAGCTCAAGGGTATTTTGGGGCTAGACCATTTTACTACAGGGACAGATATGGTGTCAGTTATGCGCTCTGTCTTCAGCCAAACAAATAAGTGGAGATGGGAAAGTGGGGTTTTGGGATGTTGCTTTCTCTTCTTTCTCCTCATCACCAGATACTTTAGCCAGAAAAAACCCAAGTTCTTCTGGATATCAGCCATGGCACCTCTGACGTCGGTGATTTTGGGAAGCGTGCTGGTTTATCTCACCCATGCTGAGAAACATGGAGTTCAAGTGATAGGAGAGTTGAAGAAGGGGTTAAATCCTATGTCATTCGGGGATCTTGTGTTTGTGTCACCTTATCTATCGACAGCTTTCAAGACCGGCATCATCACCGCCATCATAGCTCTCGCCGAAGGAATAGCAGTAGGGAGAAGCTTTTCAATGTTCAAGAACTACCATATTGATGGAAACAAAGAGATGATTGCCTTTGGAATGATGAACATTGCCGGTTCTTGCACTTCTTGTTACCTTACTACAGGGCCCTTTTCTAGATCAGCGGTGAACTACAATGCAGGATGCAAAACGGCAGTGTCGAACATTGTGATGGCGATTGCAGTAATGTTCACATTGTTGTTCCTCACACCTTTGTTCCACTACACTCCCCTTGTGGTGCTCTCAGCTATCATCATAGCCGCAATGCTCGGTCTTATAAAATACGAGGAAGCAATCCATCTCTGGAAGGTTGACAAGTTTGACTTTGTCGTCTGCATGAGTGCATACTTCGGCGTTGTTTTTGGCAGTGTCGTAATTGGCCTTGTGTTAGCGCTTGCGCTATCAGTGATGAGGGTACTGTTGTTTGTGGCAAGGCCCAAGACTTTTATGCTTGGAAACGTTCCGGATTCAATGGCTTATAGAAATGTGGAACAGTACACAAATGCAAGCAATATTCCTGGAATCCTCATTCTTGAGATTGATGCTCCCATTTACTTCGCCAATTCCAACTACTTAAGAGAAAGGATTGCAAGGTGGATTGATGAAGAGGAAGATAGAGTAAAAGCTTCAGGGGAAAGTAGCTTACAATACGTCATATTGAACATGGCTGCTGTTGGTAACATAGACACAAGTGGAATAAGCATGCTTGATGAGGTCAAGAAGATCATTGATAGAAGGGGGCTCAAGCTCGTATTGGCAAACCCTGGGAGCGAGGTGATGAAGAAGATGAACAAGTCTGACTTGATTGAGAAAATAGGTCAGGAGTGGATTCATTTGACAGTTGGAGAGGCTGTTGGAGCCTGCAAATTCATGCTTCACACCACCAAATCTGACCCGGTAAAAGAAGAACCAGGGACTTGGAATAACGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0009507 GO:0009536 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

655

Amino Acids

71.9

Weight (kDa)

8.56

Isoelectric Point (pI)

34.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfate_transp	PF00916	79 - 459	1.3e-142	Sulfate permease family
STAS	PF01740	513 - 629	3.2e-27	STAS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51895 AT3G51895 AT4G02700
fragaria_vesca	FvH4_2g23100 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920
malus_domestica	MD03G1259900.v1.1 MD11G1280200.v1.1 MD13G1198200.v1.1 MD16G1198300.v1.1
prunus_persica	Prupe.1G019900_v2.0.a1 Prupe.8G236100_v2.0.a1
pyrus_communis	pycom03g20760 pycom11g24790
rosa_chinensis	RchiOBHm_Chr4g0387511 RchiOBHm_Chr6g0290261
rosa_laevigata	RLG00000010116 RLG00000012230
rosa_multiflora	Rmu_sc0002902.1_g000006 Rmu_sc0011414.1_g000006
rosa_roxburghii	Rroxscaffold_5G00334190 Rroxscaffold_7G00177200
rosa_rugosa	Rorug03G0310300 Rorug06G0211200 Rorug06G0211300
rosa_samantha	Rh4AG016400 Rh4BG011100 Rh4CG017600 Rh4DG012300 Rh6AG321600 Rh6BG328800 Rh6CG334800 Rh6DG321700
rosa_wichuraiana	Rw4G001050 Rw6G027780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1313
AasI	GACNNNNNNGTC	1 cut(s)	1364
AatII	GACGTC	1 cut(s)	836
Acc36I	ACCTGC	1 cut(s)	163
AccB1I	GGYRCC	1 cut(s)	823
AccII	CGCG	1 cut(s)	217
AccIII	TCCGGA	1 cut(s)	1498
AciI	CCGC	8 cut(s)	65, 68, 71, 215, 599, 996, 1160, 1296
AclI	AACGTT	1 cut(s)	1494
AclWI	GGATC	1 cut(s)	948
AcoI	YGGCCR	1 cut(s)	408
AcsI	RAATTY	1 cut(s)	1901
AcuI	CTGAAG	3 cut(s)	125, 685, 1647
AcyI	GRCGYC	2 cut(s)	44, 833
AfaI	GTAC	3 cut(s)	23, 1452, 1532
AfeI	AGCGCT	1 cut(s)	1428
AfiI	CCNNNNNNNGG	4 cut(s)	55, 329, 375, 588
AflII	CTTAAG	1 cut(s)	1609
AflIII	ACRYGT	1 cut(s)	18
AgsI	TTSAA	9 cut(s)	145, 435, 893, 910, 979, 1044, 1051, 1506, 1696
AhlI	ACTAGT	1 cut(s)	169
AjnI	CCWGG	4 cut(s)	486, 1552, 1798, 1945
Alw21I	GWGCWC	2 cut(s)	383, 1278
Alw26I	GTCTC	1 cut(s)	104
AlwI	GGATC	1 cut(s)	948
Ama87I	CYCGRG	1 cut(s)	51
Aor13HI	TCCGGA	1 cut(s)	1498
Aor51HI	AGCGCT	1 cut(s)	1428
AoxI	GGCC	7 cut(s)	211, 331, 408, 414, 1142, 1414, 1469
ApaI	GGGCCC	2 cut(s)	215, 1146
ApeKI	GCWGC	3 cut(s)	73, 605, 1703
ApoI	RAATTY	1 cut(s)	1901
Asp700I	GAANNNNTTC	1 cut(s)	1039
AspLEI	GCGC	3 cut(s)	693, 1429, 1435
AspS9I	GGNCC	5 cut(s)	211, 212, 1142, 1143, 1470
AsuC2I	CCSGG	2 cut(s)	122, 1931
AsuHPI	GGTGA	9 cut(s)	253, 476, 763, 850, 859, 948, 985, 1174, 1822
AvaI	CYCGRG	1 cut(s)	51
AxyI	CCTNAGG	1 cut(s)	285
BaeGI	GKGCMC	2 cut(s)	215, 1146
BaeI	ACNNNNGTAYC	2 cut(s)	1442, 1475
BanI	GGYRCC	1 cut(s)	823
BanII	GRGCYC	4 cut(s)	215, 383, 1146, 1779
BbsI	GAAGAC	1 cut(s)	691
Bbv12I	GWGCWC	2 cut(s)	383, 1278
BbvCI	CCTCAGC	1 cut(s)	447
BbvI	GCAGC	3 cut(s)	85, 617, 1690
BccI	CCATC	9 cut(s)	206, 272, 287, 367, 717, 1007, 1061, 1201, 1341
BceAI	ACGGC	5 cut(s)	61, 395, 444, 513, 1203
BcgI	CGANNNNNNTGC	2 cut(s)	247, 281
BciT130I	CCWGG	4 cut(s)	488, 1554, 1800, 1947
BcnI	CCSGG	2 cut(s)	122, 1931
BcoDI	GTCTC	1 cut(s)	104
BcuI	ACTAGT	1 cut(s)	169
BfaI	CTAG	4 cut(s)	170, 384, 650, 1152
BfmI	CTRYAG	2 cut(s)	663, 1137
BfoI	RGCGCY	1 cut(s)	1430
BfrI	CTTAAG	1 cut(s)	1609
BfuAI	ACCTGC	1 cut(s)	163
BglI	GCCNNNNNGGC	1 cut(s)	308
BisI	GCNGC	6 cut(s)	68, 71, 74, 606, 1296, 1704
BlsI	GCNGC	6 cut(s)	69, 72, 75, 607, 1297, 1705
Bme1390I	CCNGG	6 cut(s)	122, 488, 1554, 1800, 1931, 1947
BmeT110I	CYCGRG	1 cut(s)	51
BmgT120I	GGNCC	5 cut(s)	211, 212, 1142, 1143, 1470
BmiI	GGNNCC	5 cut(s)	212, 213, 825, 1144, 1894
BmrFI	CCNGG	6 cut(s)	122, 488, 1554, 1800, 1931, 1947
BmsI	GCATC	4 cut(s)	267, 996, 1169, 1567
BpiI	GAAGAC	1 cut(s)	691
BpmI	CTGGAG	1 cut(s)	167
Bpu10I	CCTNAGC	1 cut(s)	447
BpuEI	CTTGAG	4 cut(s)	221, 617, 1589, 1763
BpuMI	CCSGG	2 cut(s)	122, 1931
BsaAI	YACGTR	1 cut(s)	19
BsaHI	GRCGYC	2 cut(s)	44, 833
BsaJI	CCNNGG	7 cut(s)	175, 411, 612, 819, 1798, 1799, 1946
BsaWI	WCCGGW	1 cut(s)	1498
BsaXI	ACNNNNNCTCC	6 cut(s)	435, 465, 879, 909, 1872, 1902
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 329, 375, 588
Bse118I	RCCGGY	2 cut(s)	983, 1109
Bse1I	ACTGG	1 cut(s)	184
Bse21I	CCTNAGG	1 cut(s)	285
Bse3DI	GCAATG	2 cut(s)	1104, 1305
BseAI	TCCGGA	1 cut(s)	1498
BseBI	CCWGG	4 cut(s)	488, 1554, 1800, 1947
BseDI	CCNNGG	7 cut(s)	175, 411, 612, 819, 1798, 1799, 1946
BseGI	GGATG	3 cut(s)	279, 749, 1184
BseLI	CCNNNNNNNGG	4 cut(s)	55, 329, 375, 588
BseMI	GCAATG	2 cut(s)	1104, 1305
BseMII	CTCAG	6 cut(s)	148, 299, 438, 453, 867, 1293
BseNI	ACTGG	1 cut(s)	184
BseRI	GAGGAG	1 cut(s)	755
BseSI	GKGCMC	2 cut(s)	215, 1146
BseXI	GCAGC	3 cut(s)	85, 617, 1690
Bsh1236I	CGCG	1 cut(s)	217
BshFI	GGCC	7 cut(s)	213, 333, 410, 416, 1144, 1416, 1471
BshNI	GGYRCC	1 cut(s)	823
BsiHKAI	GWGCWC	2 cut(s)	383, 1278
BsiHKCI	CYCGRG	1 cut(s)	51
BsiSI	CCGG	7 cut(s)	29, 122, 255, 984, 1110, 1499, 1931
BslFI	GGGAC	4 cut(s)	31, 415, 682, 1963
BslI	CCNNNNNNNGG	4 cut(s)	55, 329, 375, 588
BsmAI	GTCTC	1 cut(s)	104
BsmBI	CGTCTC	1 cut(s)	104
BsmFI	GGGAC	4 cut(s)	31, 415, 682, 1963
BsnI	GGCC	7 cut(s)	213, 333, 410, 416, 1144, 1416, 1471
BsoBI	CYCGRG	1 cut(s)	51
Bsp120I	GGGCCC	2 cut(s)	211, 1142
Bsp1286I	GDGCHC	5 cut(s)	215, 383, 1146, 1278, 1779
Bsp13I	TCCGGA	1 cut(s)	1498
Bsp143I	GATC	5 cut(s)	90, 244, 940, 1154, 1758
Bsp19I	CCATGG	1 cut(s)	819
BspACI	CCGC	8 cut(s)	65, 68, 71, 215, 599, 996, 1160, 1296
BspANI	GGCC	7 cut(s)	213, 333, 410, 416, 1144, 1416, 1471
BspCNI	CTCAG	6 cut(s)	147, 298, 439, 454, 868, 1292
BspEI	TCCGGA	1 cut(s)	1498
BspFNI	CGCG	1 cut(s)	217
BspLI	GGNNCC	5 cut(s)	212, 213, 825, 1144, 1894
BspMI	ACCTGC	1 cut(s)	163
BspPI	GGATC	1 cut(s)	948
BspT107I	GGYRCC	1 cut(s)	823
BspTI	CTTAAG	1 cut(s)	1609
BsrDI	GCAATG	2 cut(s)	1104, 1305
BsrFI	RCCGGY	2 cut(s)	983, 1109
BsrI	ACTGG	1 cut(s)	184
BssAI	RCCGGY	2 cut(s)	983, 1109
BssECI	CCNNGG	7 cut(s)	175, 411, 612, 819, 1798, 1799, 1946
BssMI	GATC	5 cut(s)	90, 244, 940, 1154, 1758
BssNI	GRCGYC	2 cut(s)	44, 833
BssT1I	CCWWGG	1 cut(s)	819
Bst2UI	CCWGG	4 cut(s)	488, 1554, 1800, 1947
Bst4CI	ACNGT	5 cut(s)	406, 613, 1455, 1530, 1876
Bst6I	CTCTTC	2 cut(s)	761, 1635
BstACI	GRCGYC	2 cut(s)	44, 833
BstAFI	CTTAAG	1 cut(s)	1609
BstBAI	YACGTR	1 cut(s)	19
BstC8I	GCNNGC	8 cut(s)	215, 271, 309, 854, 1431, 1543, 1739, 1897
BstDEI	CTNAG	6 cut(s)	134, 285, 447, 462, 876, 1279
BstDSI	CCRYGG	3 cut(s)	411, 612, 819
BstF5I	GGATG	3 cut(s)	279, 749, 1184
BstFNI	CGCG	1 cut(s)	217
BstH2I	RGCGCY	1 cut(s)	1430
BstHHI	GCGC	3 cut(s)	693, 1429, 1435
BstKTI	GATC	5 cut(s)	93, 247, 943, 1157, 1761
BstMAI	GTCTC	1 cut(s)	104
BstMBI	GATC	5 cut(s)	90, 244, 940, 1154, 1758
BstMWI	GCNNNNNNNGC	8 cut(s)	73, 223, 275, 308, 497, 605, 1004, 1892
BstNI	CCWGG	4 cut(s)	488, 1554, 1800, 1947
BstNSI	RCATGY	2 cut(s)	578, 1741
BstSCI	CCNGG	6 cut(s)	120, 486, 1552, 1798, 1929, 1945
BstSFI	CTRYAG	2 cut(s)	663, 1137
BstSLI	GKGCMC	2 cut(s)	215, 1146
BstUI	CGCG	1 cut(s)	217
BstV1I	GCAGC	3 cut(s)	85, 617, 1690
BstV2I	GAAGAC	1 cut(s)	691
BstX2I	RGATCY	1 cut(s)	940
BstXI	CCANNNNNNTGG	2 cut(s)	1067, 1953
BstYI	RGATCY	1 cut(s)	940
Bsu36I	CCTNAGG	1 cut(s)	285
BsuRI	GGCC	7 cut(s)	213, 333, 410, 416, 1144, 1416, 1471
BtgI	CCRYGG	3 cut(s)	411, 612, 819
BtgZI	GCGATG	1 cut(s)	250
BtsCI	GGATG	3 cut(s)	279, 749, 1184
BtsI	GCAGTG	2 cut(s)	1197, 1408
BtsIMutI	CAGTG	3 cut(s)	1197, 1408, 1446
BveI	ACCTGC	1 cut(s)	163
Cac8I	GCNNGC	8 cut(s)	215, 271, 309, 854, 1431, 1543, 1739, 1897
CfoI	GCGC	3 cut(s)	693, 1429, 1435
Cfr10I	RCCGGY	2 cut(s)	983, 1109
Cfr13I	GGNCC	5 cut(s)	211, 212, 1142, 1143, 1470
CseI	GACGC	1 cut(s)	33
Csp6I	GTAC	3 cut(s)	22, 1451, 1531
CviQI	GTAC	3 cut(s)	22, 1451, 1531
DdeI	CTNAG	6 cut(s)	134, 285, 447, 462, 876, 1279
DpnI	GATC	5 cut(s)	92, 246, 942, 1156, 1760
DpnII	GATC	5 cut(s)	90, 244, 940, 1154, 1758
DrdI	GACNNNNNNGTC	1 cut(s)	1364
DseDI	GACNNNNNNGTC	1 cut(s)	1364
EaeI	YGGCCR	1 cut(s)	408
Eam1104I	CTCTTC	2 cut(s)	761, 1635
EarI	CTCTTC	2 cut(s)	761, 1635
EciI	GGCGGA	1 cut(s)	54
Ecl136II	GAGCTC	1 cut(s)	381
Eco130I	CCWWGG	1 cut(s)	819
Eco24I	GRGCYC	4 cut(s)	215, 383, 1146, 1779
Eco32I	GATATC	1 cut(s)	813
Eco47III	AGCGCT	1 cut(s)	1428
Eco53kI	GAGCTC	1 cut(s)	381
Eco57I	CTGAAG	3 cut(s)	125, 685, 1647
Eco81I	CCTNAGG	1 cut(s)	285
Eco88I	CYCGRG	1 cut(s)	51
EcoICRI	GAGCTC	1 cut(s)	381
EcoO109I	RGGNCCY	3 cut(s)	211, 1142, 1143
EcoRII	CCWGG	4 cut(s)	486, 1552, 1798, 1945
EcoRV	GATATC	1 cut(s)	813
EcoT14I	CCWWGG	1 cut(s)	819
EcoT38I	GRGCYC	4 cut(s)	215, 383, 1146, 1779
ErhI	CCWWGG	1 cut(s)	819
Esp3I	CGTCTC	1 cut(s)	104
FalI	AAGNNNNNCTT	4 cut(s)	1343, 1375, 1820, 1852
FaqI	GGGAC	4 cut(s)	31, 415, 682, 1963
FauI	CCCGC	2 cut(s)	222, 592
Fnu4HI	GCNGC	6 cut(s)	68, 71, 74, 606, 1296, 1704
FokI	GGATG	3 cut(s)	266, 756, 1191
FriOI	GRGCYC	4 cut(s)	215, 383, 1146, 1779
Fsp4HI	GCNGC	6 cut(s)	68, 71, 74, 606, 1296, 1704
FspBI	CTAG	4 cut(s)	170, 384, 650, 1152
GlaI	GCGC	3 cut(s)	692, 1428, 1434
GluI	GCNGC	6 cut(s)	68, 71, 74, 606, 1296, 1704
GsuI	CTGGAG	1 cut(s)	167
HaeII	RGCGCY	1 cut(s)	1430
HaeIII	GGCC	7 cut(s)	213, 333, 410, 416, 1144, 1416, 1471
HapII	CCGG	7 cut(s)	29, 122, 255, 984, 1110, 1499, 1931
HgaI	GACGC	1 cut(s)	33
HhaI	GCGC	3 cut(s)	693, 1429, 1435
Hin1I	GRCGYC	2 cut(s)	44, 833
Hin6I	GCGC	3 cut(s)	691, 1427, 1433
HinP1I	GCGC	3 cut(s)	691, 1427, 1433
HincII	GTYRAC	1 cut(s)	1348
HindII	GTYRAC	1 cut(s)	1348
HindIII	AAGCTT	3 cut(s)	525, 1036, 1659
HinfI	GANTC	6 cut(s)	180, 325, 466, 1502, 1557, 1864
HpaII	CCGG	7 cut(s)	29, 122, 255, 984, 1110, 1499, 1931
HphI	GGTGA	9 cut(s)	253, 476, 763, 850, 859, 948, 985, 1174, 1822
Hpy166II	GTNNAC	6 cut(s)	22, 364, 1165, 1227, 1348, 1533
Hpy188I	TCNGA	7 cut(s)	179, 244, 324, 831, 1834, 1927, 1967
Hpy8I	GTNNAC	6 cut(s)	22, 364, 1165, 1227, 1348, 1533
Hpy99I	CGWCG	2 cut(s)	91, 838
HpyAV	CCTTC	6 cut(s)	100, 514, 907, 1010, 1336, 1764
HpyCH4III	ACNGT	5 cut(s)	406, 613, 1455, 1530, 1876
HpyCH4IV	ACGT	7 cut(s)	9, 18, 113, 833, 1494, 1686, 1962
HpyF10VI	GCNNNNNNNGC	8 cut(s)	73, 223, 275, 308, 497, 605, 1004, 1892
HpyF3I	CTNAG	6 cut(s)	134, 285, 447, 462, 876, 1279
HpySE526I	ACGT	7 cut(s)	9, 18, 113, 833, 1494, 1686, 1962
Hsp92I	GRCGYC	2 cut(s)	44, 833
HspAI	GCGC	3 cut(s)	691, 1427, 1433
Kpn2I	TCCGGA	1 cut(s)	1498
Kzo9I	GATC	5 cut(s)	90, 244, 940, 1154, 1758
LmnI	GCTCC	5 cut(s)	378, 443, 1585, 1803, 1892
Lsp1109I	GCAGC	3 cut(s)	85, 617, 1690
LweI	GCATC	4 cut(s)	267, 996, 1169, 1567
MaeI	CTAG	4 cut(s)	170, 384, 650, 1152
MaeII	ACGT	7 cut(s)	9, 18, 113, 833, 1494, 1686, 1962
MaeIII	GTNAC	4 cut(s)	218, 954, 1127, 1712
MalI	GATC	5 cut(s)	92, 246, 942, 1156, 1760
MboI	GATC	5 cut(s)	90, 244, 940, 1154, 1758
MflI	RGATCY	1 cut(s)	940
MhlI	GDGCHC	5 cut(s)	215, 383, 1146, 1278, 1779
MluCI	AATT	3 cut(s)	1410, 1597, 1901
MlyI	GAGTC	1 cut(s)	174
MmeI	TCCRAC	3 cut(s)	1626, 1858, 1870
MroI	TCCGGA	1 cut(s)	1498
MroXI	GAANNNNTTC	1 cut(s)	1039
MseI	TTAA	2 cut(s)	920, 1610
MslI	CAYNNNNRTG	2 cut(s)	1065, 1205
MspA1I	CMGCKG	1 cut(s)	1160
MspCI	CTTAAG	1 cut(s)	1609
MspI	CCGG	7 cut(s)	29, 122, 255, 984, 1110, 1499, 1931
MspR9I	CCNGG	6 cut(s)	122, 488, 1554, 1800, 1931, 1947
MvaI	CCWGG	4 cut(s)	488, 1554, 1800, 1947
MvnI	CGCG	1 cut(s)	217
MwoI	GCNNNNNNNGC	8 cut(s)	73, 223, 275, 308, 497, 605, 1004, 1892
NciI	CCSGG	2 cut(s)	122, 1931
NcoI	CCATGG	1 cut(s)	819
NdeII	GATC	5 cut(s)	90, 244, 940, 1154, 1758
NlaIV	GGNNCC	5 cut(s)	212, 213, 825, 1144, 1894
NmeAIII	GCCGAG	1 cut(s)	309
NmuCI	GTSAC	1 cut(s)	954
NspI	RCATGY	2 cut(s)	578, 1741
PaeI	GCATGC	1 cut(s)	1741
PasI	CCCWGGG	1 cut(s)	1799
PcsI	WCGNNNNNNNCGW	2 cut(s)	15, 1193
PdmI	GAANNNNTTC	1 cut(s)	1039
PfeI	GAWTC	5 cut(s)	325, 466, 1502, 1557, 1864
PflFI	GACNNNGTC	1 cut(s)	1361
PfoI	TCCNGGA	2 cut(s)	120, 1552
PkrI	GCNGC	6 cut(s)	69, 72, 75, 607, 1297, 1705
PleI	GAGTC	1 cut(s)	174
PpsI	GAGTC	1 cut(s)	174
Ppu21I	YACGTR	1 cut(s)	19
PsiI	TTATAA	1 cut(s)	1313
Psp124BI	GAGCTC	1 cut(s)	383
Psp1406I	AACGTT	1 cut(s)	1494
Psp6I	CCWGG	4 cut(s)	486, 1552, 1798, 1945
PspGI	CCWGG	4 cut(s)	486, 1552, 1798, 1945
PspN4I	GGNNCC	5 cut(s)	212, 213, 825, 1144, 1894
PspOMI	GGGCCC	2 cut(s)	211, 1142
PspPI	GGNCC	5 cut(s)	211, 212, 1142, 1143, 1470
PsrI	GAACNNNNNNTAC	1 cut(s)	31
PsuI	RGATCY	1 cut(s)	940
PsyI	GACNNNGTC	1 cut(s)	1361
RsaI	GTAC	3 cut(s)	23, 1452, 1532
RsaNI	GTAC	3 cut(s)	22, 1451, 1531
RseI	CAYNNNNRTG	2 cut(s)	1065, 1205
SacI	GAGCTC	1 cut(s)	383
SaqAI	TTAA	2 cut(s)	920, 1610
SatI	GCNGC	6 cut(s)	68, 71, 74, 606, 1296, 1704
Sau3AI	GATC	5 cut(s)	90, 244, 940, 1154, 1758
Sau96I	GGNCC	5 cut(s)	211, 212, 1142, 1143, 1470
SchI	GAGTC	1 cut(s)	174
ScrFI	CCNGG	6 cut(s)	122, 488, 1554, 1800, 1931, 1947
SduI	GDGCHC	5 cut(s)	215, 383, 1146, 1278, 1779
SfaNI	GCATC	4 cut(s)	267, 996, 1169, 1567
SfcI	CTRYAG	2 cut(s)	663, 1137
SmiMI	CAYNNNNRTG	2 cut(s)	1065, 1205
SmlI	CTYRAG	5 cut(s)	236, 632, 1568, 1609, 1778
SmoI	CTYRAG	5 cut(s)	236, 632, 1568, 1609, 1778
SpeI	ACTAGT	1 cut(s)	169
SphI	GCATGC	1 cut(s)	1741
Sse9I	AATT	3 cut(s)	1410, 1597, 1901
SsiI	CCGC	8 cut(s)	65, 68, 71, 215, 599, 996, 1160, 1296
SspI	AATATT	1 cut(s)	1549
SspMI	CTAG	4 cut(s)	170, 384, 650, 1152
SstI	GAGCTC	1 cut(s)	383
StyD4I	CCNGG	6 cut(s)	120, 486, 1552, 1798, 1929, 1945
StyI	CCWWGG	1 cut(s)	819
TaaI	ACNGT	5 cut(s)	406, 613, 1455, 1530, 1876
TaiI	ACGT	7 cut(s)	12, 21, 116, 836, 1497, 1689, 1965
TaqI	TCGA	3 cut(s)	341, 968, 1196
TaqII	GACCGA	1 cut(s)	1295
TasI	AATT	3 cut(s)	1410, 1597, 1901
TatI	WGTACW	1 cut(s)	1530
TauI	GCSGC	3 cut(s)	70, 73, 1298
TfiI	GAWTC	5 cut(s)	325, 466, 1502, 1557, 1864
Tru1I	TTAA	2 cut(s)	920, 1610
Tru9I	TTAA	2 cut(s)	920, 1610
TscAI	CASTG	3 cut(s)	1197, 1408, 1446
TseFI	GTSAC	1 cut(s)	954
TseI	GCWGC	3 cut(s)	73, 605, 1703
Tsp45I	GTSAC	1 cut(s)	954
TspDTI	ATGAA	8 cut(s)	70, 583, 1115, 1653, 1829, 1838, 1856, 1894
TspRI	CASTG	3 cut(s)	1197, 1408, 1446
Tth111I	GACNNNGTC	1 cut(s)	1361
Vha464I	CTTAAG	1 cut(s)	1609
XapI	RAATTY	1 cut(s)	1901
XbaI	TCTAGA	2 cut(s)	383, 1151
XceI	RCATGY	2 cut(s)	578, 1741
XmnI	GAANNNNTTC	1 cut(s)	1039
XspI	CTAG	4 cut(s)	170, 384, 650, 1152
ZraI	GACGTC	1 cut(s)	834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.