Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0003114

Physical Location & Seq

Genomic Coordinates Reverse (-)

1945180 .. 1951526

Gene Structure 6347 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG012300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGGAAACGCAGATTATGATCATCAGTATAATCCTCAACGAGTTGAGATTCCGCCTCCGAAGCCACTTTTAACTGCTGTGAAGTCGTCAGTGAGAGAGACTTTCTTTCCTGACGACCCTTTTAGGCAATTTAAGAACCAACCCGCATCCAAAAAAGCAGTTCTGGGTTTGCAATACTTCTTTACGATCCTCGAGTGGGCTCCTCGCTACAATTTGGGTTACCTCAAGTCTGATCTCATCGCCGGAATCACCATTGCCAGTCTGGCAGTTCCTCAGGGGATCAGCTATGCGAGCTTGGCTAACGTACCCCCAATCGTTGGCATATATGGGAGCTTTGTGCCTCCGATTATCTATGCGATTTTCGGAAGCTCGAGGGATATTGCAATCGGACCGGTGGCTGTTGCATCGCTTCTGTTAGCTAGTATCTTGGCGAAGGAAGTTAGCCCTACTGACAACCCTAAACTCTATTTCCAGATGGCTCTCACCTCCGGCTTATTTTCTGGAATTCTTCAGGCTTCACTTGGCTTCTTAAGACTTGGTTTTGTGGTGGACCTTCTTTCCCATGCTACAATATTGGGTTTCATGGGGGGAGCAGCGACTACTGTGATTCTTCAGCAGCTTAAAGGGGTGTTAGGGATAAAACATTTCACCCATAAATCAGATGTTGTCAATGTCCTCAAAGCGGTCTTTTCCCAATACCACGAGTGGAAATGGGAACCTGCTGTGATGGGAATCGGTTTCCTCATCTTTCTCTTAGTTACTAAATACTTTGGCAAGAAAAGACCAGCTTTCTTTTGGATAAGTGCACTGTCGCCATTGTTCTGCGTGATCGTTGGGAGCCTTATGGCTTATCTAACGCATGCCGAAAAACACCACATCGGAGTGATTGGGCACCTTAAAAAGGGGCTGAACCCTGTAACCGTGTCTGACCTGACAGCGGTTTTTAACTCGCGTCATCTTGCCGTCTCCATTAAAGCTGGGTTCATCTCTGGTATTATTGGCCTTGCTGAAGGAATAGCTGTTGGAAGAAGTTTTGCCACAGTCAAGAACTATCACATCGATGGAAACAAAGAAATGATCGCTTTTGGATTGATGAACATTATAGGCTCTTTCTTTTCTTGCTTCTTGTCAGCAGGACCATTTTCGAGAAGTGCGGTGAACTTCAATGCCGGATGCAAAACTCAAGTCTCCAACCTAGTCATGGCGTTTATTATGATGCTGACACTGCTATTTATGACACCATTGTTCCAGTATACACCACATGTGGTCCTCTGTTCCATTATAATGATGGCCATGATCGGCATCATGGACGTCCCAGCCGCCATCCACCTCTGGAAGGTAGATAAGATCGACTGTATGATATGCCTGGGTGCATTTTTGGGTGTTAGCTTTGGCAGTGTTGAGATTGGCTTATCCATTGCGGTCGTAATTTCATTGCTAAGACTGATCCTGTTCATAGCGAGACCCAGGACTCTCAATTTAGGCAACCTTCCAAACACATCGACTTATAGAAGCATTGATCAATACACAGCTGCAAAGAATGTTCCAGGAGTTCTCATTCTTCAGATCGATTCACCCATCTACTTTGCCAATTCTAACTATTTGAGGGAAAGGATCTCAAGGTGGGTATATGAAGAGGAAGACAGGATAAAATCTTCTGGAGAAACAAGCTTACAATACATTATACTAGACATTAGCACTGTCGGAGGCATTGATACGAGTGGGATCAGCATGCTAGAAGAGGTCAAGAGAAATCTAGACAGAAAGAGTATCCAGCTTGTATTAGCAAACCCAAGAAGCGAAGTGATTAAGAAGCTGGATACGTCAAAGTATATTGAAACAATTGGTCGGGAATGGATGTTTGTTACTGTGGGAGATGCTGTAGAAGCATGTAAATTTCTACTGCATAGCAGCAAACCCAGTCCAGGAGAAGAAAAGGCCAAGACACCAGAGGACAATGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0009507 GO:0009536 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

654

Amino Acids

71.74

Weight (kDa)

9.08

Isoelectric Point (pI)

35.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfate_transp	PF00916	75 - 456	3.9e-132	Sulfate permease family
STAS	PF01740	511 - 627	1.1e-25	STAS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51895 AT3G51895 AT4G02700
fragaria_vesca	FvH4_2g23100 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920 FvH4_4g00920
malus_domestica	MD03G1259900.v1.1 MD11G1280200.v1.1 MD13G1198200.v1.1 MD16G1198300.v1.1
prunus_persica	Prupe.1G019900_v2.0.a1 Prupe.8G236100_v2.0.a1
pyrus_communis	pycom03g20760 pycom11g24790
rosa_chinensis	RchiOBHm_Chr4g0387511 RchiOBHm_Chr6g0290261
rosa_laevigata	RLG00000010116 RLG00000012230
rosa_multiflora	Rmu_sc0002902.1_g000006 Rmu_sc0011414.1_g000006
rosa_roxburghii	Rroxscaffold_5G00334190 Rroxscaffold_7G00177200
rosa_rugosa	Rorug03G0310300 Rorug06G0211200 Rorug06G0211300
rosa_samantha	Rh4AG016400 Rh4BG011100 Rh4CG017600 Rh4DG012300 Rh6AG321600 Rh6BG328800 Rh6CG334800 Rh6DG321700
rosa_wichuraiana	Rw4G001050 Rw6G027780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1283
AatII	GACGTC	1 cut(s)	1314
Acc36I	ACCTGC	1 cut(s)	727
AccB1I	GGYRCC	1 cut(s)	891
AccB7I	CCANNNNNTGG	1 cut(s)	317
AccI	GTMKAC	1 cut(s)	1253
AccII	CGCG	1 cut(s)	952
AciI	CCGC	7 cut(s)	53, 144, 683, 938, 1154, 1320, 1421
AclWI	GGATC	5 cut(s)	181, 287, 1441, 1622, 1733
AcoI	YGGCCR	1 cut(s)	1290
AcsI	RAATTY	2 cut(s)	504, 1895
AcuI	CTGAAG	4 cut(s)	494, 596, 1029, 1547
AcyI	GRCGYC	1 cut(s)	1311
AfaI	GTAC	1 cut(s)	306
AfiI	CCNNNNNNNGG	8 cut(s)	196, 317, 682, 901, 937, 1201, 1336, 1925
AflII	CTTAAG	1 cut(s)	529
AflIII	ACRYGT	1 cut(s)	1261
AgeI	ACCGGT	1 cut(s)	391
AgsI	TTSAA	2 cut(s)	1165, 1838
AjnI	CCWGG	4 cut(s)	1365, 1466, 1546, 1924
Alw21I	GWGCWC	1 cut(s)	808
Alw26I	GTCTC	4 cut(s)	92, 970, 1192, 1456
Alw44I	GTGCAC	1 cut(s)	804
AlwI	GGATC	5 cut(s)	181, 287, 1441, 1622, 1733
Ama87I	CYCGRG	2 cut(s)	191, 370
AoxI	GGCC	3 cut(s)	1000, 1290, 1938
ApaLI	GTGCAC	1 cut(s)	804
ApeKI	GCWGC	4 cut(s)	593, 616, 1532, 1911
ApoI	RAATTY	2 cut(s)	504, 1895
ArsI	GACNNNNNNTTYG	2 cut(s)	1170, 1202
AsiGI	ACCGGT	1 cut(s)	391
AspS9I	GGNCC	4 cut(s)	389, 550, 1136, 1267
AsuHPI	GGTGA	5 cut(s)	241, 475, 640, 1168, 1566
AvaI	CYCGRG	2 cut(s)	191, 370
AvaII	GGWCC	4 cut(s)	389, 550, 1136, 1267
AxyI	CCTNAGG	1 cut(s)	273
BaeGI	GKGCMC	2 cut(s)	808, 894
BalI	TGGCCA	1 cut(s)	1292
BanI	GGYRCC	1 cut(s)	891
BanII	GRGCYC	1 cut(s)	202
BauI	CACGAG	1 cut(s)	701
BbsI	GAAGAC	1 cut(s)	1647
Bbv12I	GWGCWC	1 cut(s)	808
BbvI	GCAGC	4 cut(s)	605, 628, 1519, 1923
BccI	CCATC	6 cut(s)	469, 721, 1055, 1282, 1331, 1586
BceAI	ACGGC	1 cut(s)	947
BciT130I	CCWGG	4 cut(s)	1367, 1468, 1548, 1926
BciVI	GTATCC	2 cut(s)	1781, 1813
BclI	TGATCA	2 cut(s)	19, 1519
BcoDI	GTCTC	4 cut(s)	92, 970, 1192, 1456
BfaI	CTAG	5 cut(s)	420, 1196, 1688, 1736, 1757
BfmI	CTRYAG	1 cut(s)	1881
BfrI	CTTAAG	1 cut(s)	529
BfuAI	ACCTGC	1 cut(s)	727
BfuI	GTATCC	2 cut(s)	1781, 1813
BglI	GCCNNNNNGGC	1 cut(s)	263
BisI	GCNGC	5 cut(s)	594, 617, 1320, 1533, 1912
BlsI	GCNGC	5 cut(s)	595, 618, 1321, 1534, 1913
Bme1390I	CCNGG	4 cut(s)	1367, 1468, 1548, 1926
Bme18I	GGWCC	4 cut(s)	389, 550, 1136, 1267
BmeT110I	CYCGRG	2 cut(s)	191, 370
BmgT120I	GGNCC	4 cut(s)	389, 550, 1136, 1267
BmiI	GGNNCC	4 cut(s)	201, 717, 839, 893
BmrFI	CCNGG	4 cut(s)	1367, 1468, 1548, 1926
BmrI	ACTGGG	1 cut(s)	1914
BmsI	GCATC	6 cut(s)	155, 413, 1163, 1206, 1311, 1867
BmuI	ACTGGG	1 cut(s)	1914
BpiI	GAAGAC	1 cut(s)	1647
BpmI	CTGGAG	1 cut(s)	1680
BpuEI	CTTGAG	3 cut(s)	209, 1167, 1603
Bsa29I	ATCGAT	2 cut(s)	1059, 1569
BsaBI	GATNNNNATC	3 cut(s)	18, 731, 1301
BsaHI	GRCGYC	1 cut(s)	1311
BsaI	GGTCTC	1 cut(s)	1456
BsaJI	CCNNGG	2 cut(s)	1366, 1466
BsaWI	WCCGGW	1 cut(s)	391
BsaXI	ACNNNNNCTCC	2 cut(s)	1866, 1896
Bsc4I	CCNNNNNNNGG	8 cut(s)	196, 317, 682, 901, 937, 1201, 1336, 1925
Bse118I	RCCGGY	1 cut(s)	391
Bse1I	ACTGG	3 cut(s)	258, 1249, 1920
Bse21I	CCTNAGG	1 cut(s)	273
Bse3DI	GCAATG	3 cut(s)	252, 1416, 1433
Bse8I	GATNNNNATC	3 cut(s)	18, 731, 1301
BseBI	CCWGG	4 cut(s)	1367, 1468, 1548, 1926
BseCI	ATCGAT	2 cut(s)	1059, 1569
BseDI	CCNNGG	2 cut(s)	1366, 1466
BseGI	GGATG	4 cut(s)	146, 1178, 1323, 1863
BseJI	GATNNNNATC	3 cut(s)	18, 731, 1301
BseLI	CCNNNNNNNGG	8 cut(s)	196, 317, 682, 901, 937, 1201, 1336, 1925
BseMI	GCAATG	3 cut(s)	252, 1416, 1433
BseMII	CTCAG	1 cut(s)	287
BseNI	ACTGG	3 cut(s)	258, 1249, 1920
BseRI	GAGGAG	1 cut(s)	192
BseSI	GKGCMC	2 cut(s)	808, 894
BseXI	GCAGC	4 cut(s)	605, 628, 1519, 1923
BseYI	CCCAGC	2 cut(s)	977, 1315
Bsh1236I	CGCG	1 cut(s)	952
Bsh1285I	CGRYCG	1 cut(s)	1425
BshFI	GGCC	3 cut(s)	1002, 1292, 1940
BshNI	GGYRCC	1 cut(s)	891
BshTI	ACCGGT	1 cut(s)	391
BshVI	ATCGAT	2 cut(s)	1059, 1569
BsiEI	CGRYCG	1 cut(s)	1425
BsiHKAI	GWGCWC	1 cut(s)	808
BsiHKCI	CYCGRG	2 cut(s)	191, 370
BsiSI	CCGG	4 cut(s)	243, 392, 489, 1170
BslFI	GGGAC	1 cut(s)	1298
BslI	CCNNNNNNNGG	8 cut(s)	196, 317, 682, 901, 937, 1201, 1336, 1925
BsmAI	GTCTC	4 cut(s)	92, 970, 1192, 1456
BsmBI	CGTCTC	1 cut(s)	970
BsmFI	GGGAC	1 cut(s)	1298
BsnI	GGCC	3 cut(s)	1002, 1292, 1940
Bso31I	GGTCTC	1 cut(s)	1456
BsoBI	CYCGRG	2 cut(s)	191, 370
Bsp1286I	GDGCHC	3 cut(s)	202, 808, 894
BspACI	CCGC	7 cut(s)	53, 144, 683, 938, 1154, 1320, 1421
BspANI	GGCC	3 cut(s)	1002, 1292, 1940
BspCNI	CTCAG	1 cut(s)	286
BspDI	ATCGAT	2 cut(s)	1059, 1569
BspFNI	CGCG	1 cut(s)	952
BspLI	GGNNCC	4 cut(s)	201, 717, 839, 893
BspMI	ACCTGC	1 cut(s)	727
BspPI	GGATC	5 cut(s)	181, 287, 1441, 1622, 1733
BspT107I	GGYRCC	1 cut(s)	891
BspTI	CTTAAG	1 cut(s)	529
BspTNI	GGTCTC	1 cut(s)	1456
BsrDI	GCAATG	3 cut(s)	252, 1416, 1433
BsrFI	RCCGGY	1 cut(s)	391
BsrI	ACTGG	3 cut(s)	258, 1249, 1920
BssAI	RCCGGY	1 cut(s)	391
BssECI	CCNNGG	2 cut(s)	1366, 1466
BssNAI	GTATAC	1 cut(s)	1254
BssNI	GRCGYC	1 cut(s)	1311
BssSI	CACGAG	1 cut(s)	701
Bst1107I	GTATAC	1 cut(s)	1254
Bst2BI	CACGAG	1 cut(s)	701
Bst2UI	CCWGG	4 cut(s)	1367, 1468, 1548, 1926
Bst4CI	ACNGT	7 cut(s)	604, 810, 922, 1042, 1355, 1702, 1870
Bst6I	CTCTTC	2 cut(s)	1629, 1734
BstACI	GRCGYC	1 cut(s)	1311
BstAFI	CTTAAG	1 cut(s)	529
BstC8I	GCNNGC	3 cut(s)	292, 861, 1733
BstDEI	CTNAG	3 cut(s)	273, 754, 1439
BstEII	GGTNACC	1 cut(s)	218
BstENI	CCTNNNNNAGG	2 cut(s)	899, 1334
BstF5I	GGATG	4 cut(s)	146, 1178, 1323, 1863
BstFNI	CGCG	1 cut(s)	952
BstMAI	GTCTC	4 cut(s)	92, 970, 1192, 1456
BstMCI	CGRYCG	1 cut(s)	1425
BstMWI	GCNNNNNNNGC	6 cut(s)	61, 263, 291, 296, 1225, 1886
BstNI	CCWGG	4 cut(s)	1367, 1468, 1548, 1926
BstNSI	RCATGY	4 cut(s)	863, 1265, 1735, 1893
BstPI	GGTNACC	1 cut(s)	218
BstSCI	CCNGG	4 cut(s)	1365, 1466, 1546, 1924
BstSFI	CTRYAG	1 cut(s)	1881
BstSLI	GKGCMC	2 cut(s)	808, 894
BstUI	CGCG	1 cut(s)	952
BstV1I	GCAGC	4 cut(s)	605, 628, 1519, 1923
BstV2I	GAAGAC	1 cut(s)	1647
BstX2I	RGATCY	1 cut(s)	1614
BstYI	RGATCY	1 cut(s)	1614
BstZ17I	GTATAC	1 cut(s)	1254
Bsu15I	ATCGAT	2 cut(s)	1059, 1569
Bsu36I	CCTNAGG	1 cut(s)	273
BsuI	GTATCC	2 cut(s)	1781, 1813
BsuRI	GGCC	3 cut(s)	1002, 1292, 1940
BsuTUI	ATCGAT	2 cut(s)	1059, 1569
BtgZI	GCGATG	2 cut(s)	223, 390
BtsCI	GGATG	4 cut(s)	146, 1178, 1323, 1863
BtsI	GCAGTG	2 cut(s)	1223, 1402
BtsIMutI	CAGTG	5 cut(s)	96, 806, 1223, 1402, 1698
BveI	ACCTGC	1 cut(s)	727
Cac8I	GCNNGC	3 cut(s)	292, 861, 1733
Cfr10I	RCCGGY	1 cut(s)	391
Cfr13I	GGNCC	4 cut(s)	389, 550, 1136, 1267
ClaI	ATCGAT	2 cut(s)	1059, 1569
CpoI	CGGWCCG	1 cut(s)	389
CseI	GACGC	1 cut(s)	941
Csp6I	GTAC	1 cut(s)	305
CspAI	ACCGGT	1 cut(s)	391
CspI	CGGWCCG	1 cut(s)	389
CviAII	CATG	9 cut(s)	563, 583, 860, 1201, 1262, 1294, 1306, 1732, 1890
CviQI	GTAC	1 cut(s)	305
DdeI	CTNAG	3 cut(s)	273, 754, 1439
EaeI	YGGCCR	1 cut(s)	1290
Eam1104I	CTCTTC	2 cut(s)	1629, 1734
EarI	CTCTTC	2 cut(s)	1629, 1734
EciI	GGCGGA	1 cut(s)	42
Eco24I	GRGCYC	1 cut(s)	202
Eco31I	GGTCTC	1 cut(s)	1456
Eco47I	GGWCC	4 cut(s)	389, 550, 1136, 1267
Eco57I	CTGAAG	4 cut(s)	494, 596, 1029, 1547
Eco81I	CCTNAGG	1 cut(s)	273
Eco88I	CYCGRG	2 cut(s)	191, 370
Eco91I	GGTNACC	1 cut(s)	218
EcoNI	CCTNNNNNAGG	2 cut(s)	899, 1334
EcoO65I	GGTNACC	1 cut(s)	218
EcoRI	GAATTC	1 cut(s)	504
EcoRII	CCWGG	4 cut(s)	1365, 1466, 1546, 1924
EcoT38I	GRGCYC	1 cut(s)	202
Esp3I	CGTCTC	1 cut(s)	970
FaeI	CATG	9 cut(s)	566, 586, 863, 1204, 1265, 1297, 1309, 1735, 1893
FalI	AAGNNNNNCTT	2 cut(s)	772, 804
FaqI	GGGAC	1 cut(s)	1298
FatI	CATG	9 cut(s)	562, 582, 859, 1200, 1261, 1293, 1305, 1731, 1889
FauI	CCCGC	1 cut(s)	151
FbaI	TGATCA	2 cut(s)	19, 1519
FblI	GTMKAC	1 cut(s)	1253
Fnu4HI	GCNGC	5 cut(s)	594, 617, 1320, 1533, 1912
FokI	GGATG	4 cut(s)	133, 1185, 1310, 1870
FriOI	GRGCYC	1 cut(s)	202
Fsp4HI	GCNGC	5 cut(s)	594, 617, 1320, 1533, 1912
FspBI	CTAG	5 cut(s)	420, 1196, 1688, 1736, 1757
GluI	GCNGC	5 cut(s)	594, 617, 1320, 1533, 1912
GsaI	CCCAGC	2 cut(s)	981, 1319
GsuI	CTGGAG	1 cut(s)	1680
HaeIII	GGCC	3 cut(s)	1002, 1292, 1940
HapII	CCGG	4 cut(s)	243, 392, 489, 1170
HgaI	GACGC	1 cut(s)	941
Hin1I	GRCGYC	1 cut(s)	1311
Hin1II	CATG	9 cut(s)	566, 586, 863, 1204, 1265, 1297, 1309, 1735, 1893
HindIII	AAGCTT	1 cut(s)	1669
HinfI	GANTC	6 cut(s)	49, 246, 607, 732, 1471, 1571
HpaII	CCGG	4 cut(s)	243, 392, 489, 1170
HphI	GGTGA	5 cut(s)	241, 475, 640, 1168, 1566
Hpy166II	GTNNAC	4 cut(s)	550, 806, 1159, 1254
Hpy8I	GTNNAC	4 cut(s)	550, 806, 1159, 1254
HpyAV	CCTTC	5 cut(s)	427, 563, 1004, 1330, 1499
HpyCH4III	ACNGT	7 cut(s)	604, 810, 922, 1042, 1355, 1702, 1870
HpyCH4IV	ACGT	3 cut(s)	303, 1311, 1823
HpyCH4V	TGCA	8 cut(s)	172, 383, 404, 806, 1176, 1373, 1535, 1906
HpyF10VI	GCNNNNNNNGC	6 cut(s)	61, 263, 291, 296, 1225, 1886
HpyF3I	CTNAG	3 cut(s)	273, 754, 1439
HpySE526I	ACGT	3 cut(s)	303, 1311, 1823
Hsp92I	GRCGYC	1 cut(s)	1311
Hsp92II	CATG	9 cut(s)	566, 586, 863, 1204, 1265, 1297, 1309, 1735, 1893
Ksp22I	TGATCA	2 cut(s)	19, 1519
LmnI	GCTCC	4 cut(s)	205, 330, 590, 837
Lsp1109I	GCAGC	4 cut(s)	605, 628, 1519, 1923
LweI	GCATC	6 cut(s)	155, 413, 1163, 1206, 1311, 1867
MaeI	CTAG	5 cut(s)	420, 1196, 1688, 1736, 1757
MaeII	ACGT	3 cut(s)	303, 1311, 1823
MaeIII	GTNAC	4 cut(s)	218, 757, 916, 1864
MboII	GAAGA	9 cut(s)	500, 602, 1038, 1553, 1646, 1647, 1652, 1751, 1943
MfeI	CAATTG	1 cut(s)	1842
MflI	RGATCY	1 cut(s)	1614
MhlI	GDGCHC	3 cut(s)	202, 808, 894
MlsI	TGGCCA	1 cut(s)	1292
MluCI	AATT	8 cut(s)	128, 211, 504, 1428, 1477, 1591, 1842, 1895
MluNI	TGGCCA	1 cut(s)	1292
MlyI	GAGTC	1 cut(s)	1465
MmeI	TCCRAC	3 cut(s)	1003, 1215, 1684
Mox20I	TGGCCA	1 cut(s)	1292
MscI	TGGCCA	1 cut(s)	1292
MseI	TTAA	8 cut(s)	71, 132, 530, 621, 897, 945, 972, 1809
MslI	CAYNNNNRTG	3 cut(s)	881, 1059, 1283
Msp20I	TGGCCA	1 cut(s)	1292
MspA1I	CMGCKG	2 cut(s)	938, 1532
MspCI	CTTAAG	1 cut(s)	529
MspI	CCGG	4 cut(s)	243, 392, 489, 1170
MspR9I	CCNGG	4 cut(s)	1367, 1468, 1548, 1926
MunI	CAATTG	1 cut(s)	1842
MvaI	CCWGG	4 cut(s)	1367, 1468, 1548, 1926
MvnI	CGCG	1 cut(s)	952
MwoI	GCNNNNNNNGC	6 cut(s)	61, 263, 291, 296, 1225, 1886
NlaIII	CATG	9 cut(s)	566, 586, 863, 1204, 1265, 1297, 1309, 1735, 1893
NlaIV	GGNNCC	4 cut(s)	201, 717, 839, 893
NspI	RCATGY	4 cut(s)	863, 1265, 1735, 1893
PaeI	GCATGC	2 cut(s)	863, 1735
PaeR7I	CTCGAG	2 cut(s)	191, 370
PciI	ACATGT	1 cut(s)	1261
PfeI	GAWTC	5 cut(s)	49, 246, 607, 732, 1571
PflFI	GACNNNGTC	1 cut(s)	1958
PflMI	CCANNNNNTGG	1 cut(s)	317
PfoI	TCCNGGA	2 cut(s)	1546, 1924
PinAI	ACCGGT	1 cut(s)	391
PkrI	GCNGC	5 cut(s)	595, 618, 1321, 1534, 1913
PleI	GAGTC	1 cut(s)	1465
PpsI	GAGTC	1 cut(s)	1465
PscI	ACATGT	1 cut(s)	1261
PsiI	TTATAA	1 cut(s)	1283
Psp6I	CCWGG	4 cut(s)	1365, 1466, 1546, 1924
PspEI	GGTNACC	1 cut(s)	218
PspFI	CCCAGC	2 cut(s)	977, 1315
PspGI	CCWGG	4 cut(s)	1365, 1466, 1546, 1924
PspN4I	GGNNCC	4 cut(s)	201, 717, 839, 893
PspPI	GGNCC	4 cut(s)	389, 550, 1136, 1267
PspXI	VCTCGAGB	2 cut(s)	191, 370
PsuI	RGATCY	1 cut(s)	1614
PsyI	GACNNNGTC	1 cut(s)	1958
PvuII	CAGCTG	1 cut(s)	1532
RsaI	GTAC	1 cut(s)	306
RsaNI	GTAC	1 cut(s)	305
RseI	CAYNNNNRTG	3 cut(s)	881, 1059, 1283
Rsr2I	CGGWCCG	1 cut(s)	389
RsrII	CGGWCCG	1 cut(s)	389
SaqAI	TTAA	8 cut(s)	71, 132, 530, 621, 897, 945, 972, 1809
SatI	GCNGC	5 cut(s)	594, 617, 1320, 1533, 1912
Sau96I	GGNCC	4 cut(s)	389, 550, 1136, 1267
SchI	GAGTC	1 cut(s)	1465
ScrFI	CCNGG	4 cut(s)	1367, 1468, 1548, 1926
SduI	GDGCHC	3 cut(s)	202, 808, 894
SfaNI	GCATC	6 cut(s)	155, 413, 1163, 1206, 1311, 1867
SfcI	CTRYAG	1 cut(s)	1881
Sfr274I	CTCGAG	2 cut(s)	191, 370
SinI	GGWCC	4 cut(s)	389, 550, 1136, 1267
SlaI	CTCGAG	2 cut(s)	191, 370
SmiMI	CAYNNNNRTG	3 cut(s)	881, 1059, 1283
SmlI	CTYRAG	6 cut(s)	191, 224, 370, 529, 1182, 1618
SmoI	CTYRAG	6 cut(s)	191, 224, 370, 529, 1182, 1618
SphI	GCATGC	2 cut(s)	863, 1735
Sse9I	AATT	8 cut(s)	128, 211, 504, 1428, 1477, 1591, 1842, 1895
SsiI	CCGC	7 cut(s)	53, 144, 683, 938, 1154, 1320, 1421
SspI	AATATT	1 cut(s)	573
SspMI	CTAG	5 cut(s)	420, 1196, 1688, 1736, 1757
StyD4I	CCNGG	4 cut(s)	1365, 1466, 1546, 1924
TaaI	ACNGT	7 cut(s)	604, 810, 922, 1042, 1355, 1702, 1870
TaiI	ACGT	3 cut(s)	306, 1314, 1826
TaqI	TCGA	7 cut(s)	192, 371, 1059, 1145, 1350, 1502, 1569
TasI	AATT	8 cut(s)	128, 211, 504, 1428, 1477, 1591, 1842, 1895
TauI	GCSGC	1 cut(s)	1322
TfiI	GAWTC	5 cut(s)	49, 246, 607, 732, 1571
Tru1I	TTAA	8 cut(s)	71, 132, 530, 621, 897, 945, 972, 1809
Tru9I	TTAA	8 cut(s)	71, 132, 530, 621, 897, 945, 972, 1809
TscAI	CASTG	5 cut(s)	96, 813, 1230, 1402, 1705
TseI	GCWGC	4 cut(s)	593, 616, 1532, 1911
TspDTI	ATGAA	6 cut(s)	571, 973, 1109, 1422, 1444, 1647
TspRI	CASTG	5 cut(s)	96, 813, 1230, 1402, 1705
Tth111I	GACNNNGTC	1 cut(s)	1958
Van91I	CCANNNNNTGG	1 cut(s)	317
Vha464I	CTTAAG	1 cut(s)	529
VneI	GTGCAC	1 cut(s)	804
VpaK11BI	GGWCC	4 cut(s)	389, 550, 1136, 1267
XagI	CCTNNNNNAGG	2 cut(s)	899, 1334
XapI	RAATTY	2 cut(s)	504, 1895
XbaI	TCTAGA	1 cut(s)	1756
XceI	RCATGY	4 cut(s)	863, 1265, 1735, 1893
XcmI	CCANNNNNNNNNTGG	4 cut(s)	259, 792, 1198, 1285
XhoI	CTCGAG	2 cut(s)	191, 370
XmiI	GTMKAC	1 cut(s)	1253
XspI	CTAG	5 cut(s)	420, 1196, 1688, 1736, 1757
ZraI	GACGTC	1 cut(s)	1312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.