MD14G1004500.v1.1

Plant phosphoribosyltransferase C-terminal

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
486681 .. 489854
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1004500.v1.1.491

Sequence Viewer

Length: 3174 bp
ATGGCTACTGTACGGAAACTGATAGTTGAGGTTGTCGATGCTCGAAATCTGTCGCCGAAAGACGGGCACGGGACGTCGAGCCCGTACGTGGTGATGGACTACTACGGGCAGCGGAAGCGGACGCAGACAAAGATACGAGACCTAAACCCCGTGTGGAACGAGTTGCTCGAGTTCAACGTTGGCAAGCCTTCCGATGTTTTTGGGGATGTGCTGGAGCTCGATGTCCACCACGACAAGAACTACGGACCCACCCGGAGGAACAACTTCCTCGGGAGGATCCGACTGAGTTCCACTCAGTTTGTCAAGAAAGGCGAGGAGGCTTTGATTTATTTCCCATTGGAGAAGAAGAGCTTCTTTAGTTGGATTCAAGGTGAAATTGGCTTGAAGATTTATTACGTCGATGAGGTTGTCCCGCCGCCTGCACCACCAACACCGCCGCCTCAAGCGGAAGAGCCAAAGGCTGAAACTGCACCGCCTCCGTCGTCGGAGGCGCCGCCGCCACCAGAATCTGACTCAACCCCACCACCAGGCGAGAAGGAAACTAAGGCGGACCCACCACCGGAAGCAGAACAAGCACCGCCACCGGAAGGTGAGAAGCCCGCCGAAGAACCACCGACTGAGGTGGTGCCACCACAGGAAACTGTAGCTCCTGAAGATGTACAGTCTGATCCTCCACCGGGGCCGACGTCAACACCACCACCACCCACTGATGATGCAAATCATGATCAAGGGGATCCGCCGCCGCCGCCACCACCTGAAGCAGCCATGCAACGTGAACCCGAAATAGAGATGATTGGAGCCGCCGTATCGAAATCAGTTCCAGATGTCAAATTCCATGGAATCAACGGCCCACAGCCAATGCCAAGGCCACCAGTAATGAACTATACGTCGCAGCTGGAGCCAACAGAAAGCATGTCGATGGATCGGCCGTCGTTTGATCTGGTGGAGAAGATGCACTACCTCTTCGTCCGAGTGGTGAAGGCGCGCTTCATTCCCTCCAGCGGCAGTCCGATCGTTAAAATCTCCACTGCCAACCACCATATCACGTCCAAACCCGCCAGAAAAACCCAATGCTTCGAGTGGGACCAGACCTTCGCCTTCGCCCGCCAATCCCCCGACCAATCCGACGCCTCCATCCTCGAAATTTCAGTGTGGGACCCGCCCATGTTTGACCCCGCGACCGCCTCGGTTGCCTCCGGGCATCACTTCCTCGGTGGAATCTGTTTCGACGTGACGGAAATTCCCCTGAGAGACCCGCCCGACAGCCCCTTGGCCCCGCAGTGGTACAGGCTGGAGGGCGGCGGGGCCCGCATGAACGGCGACCTGATGCTCGCCACGTGGATGGGAACTCAGGCGGACGATTCGTTTCCCGACGCGTGGAAGACCGATACAGCCGGTAACCCAAACGCGCGAGCCAAAGTCTACCAATCGCCGAAGCTGTGGTATCTCCGAGCAACAGTCCTCGAAGCCCAAGACGTTCTCCCCATGACGCCGTCGTTGACGGAGTCATCTGTCCAAGTCAAAGCCCAGCTCGGATTCCAGTCCCTCAAGACCGACCCCGCAGTCACCCAAAACGGCACGCTGTCGTGGAACCAAGACTTGATGTTCGTAGCCGCGGAGCCGTTCAGCGATCGTTTAATTTTCACTGTAGAGAATCGGCTAGCGAAAGGACCGGTCACATTGGGGGTGGCTACAATACCCCTTACCGCCATCGAACGACGCGTCGACGACCGCAAAGTGGCTTCGAGATGGTTCTCATTGGAGAGCCCAGGCGAGGAAGACCAGAAGAAGAGGACGGTGTACAGAGGCAGAATGCACCTGCGCCTCTGTTTCGACGGCGGGTATCACGTGATGGACGAGGCAGCGTACGTGTGCAGCGACTACCGGCCCACCGCGAGGCAGCTCTGGAAGCCGCCGCTGGGCACCGTCGAGCTCGGCGTCATCGGGTGCAAGAACTTGATACCTGTCAAGACGGTGAGCGGTAAGGGATGTACGGATGCGTATTGCGTGGCAAAATATGGATCCAAATGGGTACGGACACGGGCCGTGTGCGATAGCTTGGAGCCCAAATGGAACGAGCAGTATACGTTTAAAGTATACGATCCGTGTACGGTGTTGAGCATCGGCGTTTTTGATAGCTCTGGACCGGGATTCAAAATCGACGGCTCGACAGATGCCACGCGTCCCGATTTTCGTATCGGGAAGCTCCGCTTGCGTATTTCGACGCTGGCTACGGGTAGAGTATACAGAAATACGTATCCGCTGTTGCTTTTGTCTCCCGCCGGTTTGAAAAAAATGGGGGAGGTGGAGGTGGCCATACGGTTTGTTCGAGTGTGTCCGACGTTGGATTTGATCCACGCGTACTCGCAGCCTTCACTGCCGTTGATGCACCACATAAAGCCGCTAGGTGTGATGCAACAGGACCTACTGCGCAGGGCGGCGGTTAAGATCGTCGCCGCACACCTGTCTCGCTCGGAACCGCCGCTCGGGCGCGAGGTTGTGATTTACATGCTGGACGCGGATTCGCAGGGATTCAGCATGCGGAAAGTGCGCGCCAATTATTTCCGGATCATCAATGTCGTAGCAGGGGTTGTGGATGTCGTAGCGTGGATAAACGACACGCGTTCTTGGAAGAAACCGATGGCAACGATTCTTGTGCACGCACTGCTGGTGCTGCTCGTTTGGTTCCCGGATCTGATCGTGCCCACCCTGTTGTTTTACGTGTTTGTGATTGGCGCGTGGAACTACAGGTTTCGCTCTCGGGCCCCACTCCAGCACTTTGACCCGAAGCTCTCGCTGGCGGACAACGTTGACCGGGACGAGCTGGACGAGGAGTTTGATGCGGTGCCGAGCAACAGGCCGTATGAGGTGGTGCGGGCGAGGTACGACAAGCTTAGGATGTTGGGGGCACGCGTGCAGACCGTGCTGGGAGATTTTGCAACGCAAGGGGAACGAGTGCAGGCGCTGGTGACGTGGCAGGATCCGCGGGCGACGGGGATCTTTGTGGTGTTGTGTTTGGTGGTGGCGATGATACTGTACGTGGTGCCGTCGAAGATGGTGGCGATGGCGTTTGGGTTCTATTATCTCCGTCATCCGATATTCCGTGATCGGATGCCGTCGCCGGCTTTGAACTTCATTCGACGGCTTCCGTCGTTGTCTGATCGCCTTTTGTGA

Protein Analysis

1058

Amino Acids

117.97

Weight (kDa)

6.39

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 6 - 106 2.8e-18 C2 domain
C2 PF00168 481 - 587 3.9e-08 C2 domain
C2 PF00168 641 - 755 3.5e-16 C2 domain
PRT_C PF08372 901 - 1057 3.4e-70 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17980
fragaria_vesca FvH4_5g32500
malus_domestica MD14G1004500.v1.1
prunus_persica Prupe.7G007300_v2.0.a1
pyrus_communis pycom14g00300
rosa_chinensis RchiOBHm_Chr7g0229081
rosa_laevigata RLG00000001532
rosa_multiflora Rmu_co8189216.1_g000001 Rmu_sc0000271.1_g000019
rosa_roxburghii Rroxscaffold_3G00230740
rosa_rugosa Rorug07G0255500
rosa_samantha Rh7AG406700 Rh7BG386100 Rh7CG424400 Rh7DG401000
rosa_wichuraiana Rw7G033760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1827
AasI GACNNNNNNGTC 1 cut(s) 1562
AatII GACGTC 2 cut(s) 77, 689
Acc16I TGCGCA 1 cut(s) 2432
Acc36I ACCTGC 1 cut(s) 1827
AccB1I GGYRCC 5 cut(s) 490, 625, 1922, 2845, 3043
AccBSI CCGCTC 2 cut(s) 1980, 2485
AccI GTMKAC 5 cut(s) 1422, 1725, 2084, 2097, 2244
AccIII TCCGGA 1 cut(s) 2565
AclI AACGTT 2 cut(s) 177, 2808
AcoI YGGCCR 2 cut(s) 926, 2313
AcsI RAATTY 3 cut(s) 830, 1143, 1239
AcuI CTGAAG 2 cut(s) 672, 777
AcvI CACGTG 2 cut(s) 1338, 1849
AcyI GRCGYC 6 cut(s) 74, 491, 686, 1128, 1490, 1938
AflIII ACRYGT 8 cut(s) 1374, 1720, 1869, 2180, 2358, 2621, 2721, 2911
AgeI ACCGGT 1 cut(s) 1672
AgsI TTSAA 6 cut(s) 175, 368, 385, 2155, 2290, 3130
AjiI CACGTC 3 cut(s) 1047, 1231, 2973
AjnI CCWGG 2 cut(s) 526, 1768
Alw21I GWGCWC 3 cut(s) 219, 1935, 2661
Alw26I GTCTC 4 cut(s) 132, 1245, 2280, 2472
Alw44I GTGCAC 1 cut(s) 2657
AlwNI CAGNNNCTG 2 cut(s) 509, 2965
Ama87I CYCGRG 4 cut(s) 167, 269, 2486, 2760
Aor13HI TCCGGA 1 cut(s) 2565
ApaI GGGCCC 2 cut(s) 1309, 2767
ApaLI GTGCAC 1 cut(s) 2657
ApeKI GCWGC 8 cut(s) 109, 761, 892, 1862, 1875, 1900, 2368, 2674
ApoI RAATTY 3 cut(s) 830, 1143, 1239
AsiGI ACCGGT 1 cut(s) 1672
Asp700I GAANNNNTTC 2 cut(s) 263, 350
AsuC2I CCSGG 6 cut(s) 253, 678, 1198, 2148, 2690, 2816
AsuHPI GGTGA 7 cut(s) 103, 383, 602, 988, 1558, 1987, 2980
AsuNHI GCTAGC 1 cut(s) 1660
AvaI CYCGRG 4 cut(s) 167, 269, 2486, 2760
AvaII GGWCC 7 cut(s) 245, 550, 1084, 1156, 1670, 2144, 2422
BaeGI GKGCMC 7 cut(s) 69, 1309, 1925, 2661, 2706, 2767, 2911
BalI TGGCCA 1 cut(s) 2315
BamHI GGATCC 4 cut(s) 276, 733, 2021, 2980
BanI GGYRCC 5 cut(s) 490, 625, 1922, 2845, 3043
BanII GRGCYC 7 cut(s) 83, 219, 1309, 1769, 1935, 2067, 2767
BarI GAAGNNNNNNTAC 4 cut(s) 377, 409, 941, 973
BbrPI CACGTG 2 cut(s) 1338, 1849
BbsI GAAGAC 2 cut(s) 1388, 1785
Bbv12I GWGCWC 3 cut(s) 219, 1935, 2661
BbvI GCAGC 8 cut(s) 121, 773, 904, 1874, 1887, 1912, 2380, 2661
BcgI CGANNNNNNTGC 4 cut(s) 994, 1028, 2638, 2672
BciT130I CCWGG 2 cut(s) 528, 1770
BciVI GTATCC 1 cut(s) 2268
BclI TGATCA 1 cut(s) 724
BcnI CCSGG 6 cut(s) 253, 678, 1198, 2148, 2690, 2816
BcoDI GTCTC 4 cut(s) 132, 1245, 2280, 2472
BfaI CTAG 2 cut(s) 1661, 2405
BfmI CTRYAG 3 cut(s) 642, 1647, 2746
BfoI RGCGCY 2 cut(s) 494, 2966
BfuAI ACCTGC 1 cut(s) 1827
BfuI GTATCC 1 cut(s) 2268
BglI GCCNNNNNGGC 1 cut(s) 2488
Bme1390I CCNGG 8 cut(s) 253, 528, 678, 1198, 1770, 2148, 2690, 2816
Bme18I GGWCC 7 cut(s) 245, 550, 1084, 1156, 1670, 2144, 2422
BmeT110I CYCGRG 4 cut(s) 167, 269, 2486, 2760
BmgBI CACGTC 3 cut(s) 1047, 1231, 2973
BmrFI CCNGG 8 cut(s) 253, 528, 678, 1198, 1770, 2148, 2690, 2816
BmtI GCTAGC 1 cut(s) 1664
BpiI GAAGAC 2 cut(s) 1388, 1785
BplI GAGNNNNNCTC 2 cut(s) 277, 309
BpmI CTGGAG 5 cut(s) 233, 917, 982, 1313, 2756
Bpu10I CCTNAGC 1 cut(s) 2894
BpuEI CTTGAG 2 cut(s) 426, 1532
BpuMI CCSGG 6 cut(s) 253, 678, 1198, 2148, 2690, 2816
BsaAI YACGTR 7 cut(s) 88, 1338, 1849, 1870, 2256, 2722, 3040
BsaBI GATNNNNATC 1 cut(s) 717
BsaHI GRCGYC 6 cut(s) 74, 491, 686, 1128, 1490, 1938
BsaI GGTCTC 2 cut(s) 132, 1245
BsaWI WCCGGW 4 cut(s) 559, 583, 1672, 2565
BsaXI ACNNNNNCTCC 4 cut(s) 631, 661, 789, 819
Bse118I RCCGGY 5 cut(s) 1394, 1672, 1884, 2282, 3121
Bse1I ACTGG 2 cut(s) 872, 1540
Bse8I GATNNNNATC 1 cut(s) 717
BseAI TCCGGA 1 cut(s) 2565
BseBI CCWGG 2 cut(s) 528, 1770
BseGI GGATG 9 cut(s) 211, 1134, 1347, 1994, 2002, 2602, 2904, 3091, 3117
BseJI GATNNNNATC 1 cut(s) 717
BseMII CTCAG 5 cut(s) 275, 308, 609, 1238, 1364
BseNI ACTGG 2 cut(s) 872, 1540
BsePI GCGCGC 2 cut(s) 983, 2551
BseRI GAGGAG 2 cut(s) 329, 2846
BseSI GKGCMC 7 cut(s) 69, 1309, 1925, 2661, 2706, 2767, 2911
BseX3I CGGCCG 1 cut(s) 926
BseXI GCAGC 8 cut(s) 121, 773, 904, 1874, 1887, 1912, 2380, 2661
BseYI CCCAGC 3 cut(s) 1527, 1918, 2926
BsgI GTGCAG 5 cut(s) 405, 453, 1894, 2936, 2978
Bsh1285I CGRYCG 5 cut(s) 929, 1014, 1182, 1633, 1732
BshNI GGYRCC 5 cut(s) 490, 625, 1922, 2845, 3043
BshTI ACCGGT 1 cut(s) 1672
BsiEI CGRYCG 5 cut(s) 929, 1014, 1182, 1633, 1732
BsiHKAI GWGCWC 3 cut(s) 219, 1935, 2661
BsiHKCI CYCGRG 4 cut(s) 167, 269, 2486, 2760
BsiWI CGTACG 2 cut(s) 84, 1866
BslFI GGGAC 7 cut(s) 85, 395, 1097, 1169, 1528, 2169, 2831
BsmAI GTCTC 4 cut(s) 132, 1245, 2280, 2472
BsmFI GGGAC 7 cut(s) 85, 395, 1097, 1169, 1528, 2169, 2831
BsmI GAATGC 1 cut(s) 1818
Bso31I GGTCTC 2 cut(s) 132, 1245
BsoBI CYCGRG 4 cut(s) 167, 269, 2486, 2760
Bsp120I GGGCCC 2 cut(s) 1305, 2763
Bsp13I TCCGGA 1 cut(s) 2565
Bsp1407I TGTACA 2 cut(s) 658, 1800
Bsp19I CCATGG 1 cut(s) 835
BspCNI CTCAG 5 cut(s) 276, 307, 610, 1239, 1363
BspEI TCCGGA 1 cut(s) 2565
BspHI TCATGA 1 cut(s) 721
BspMI ACCTGC 1 cut(s) 1827
BspOI GCTAGC 1 cut(s) 1664
BspQI GCTCTTC 2 cut(s) 341, 444
BspT107I GGYRCC 5 cut(s) 490, 625, 1922, 2845, 3043
BspTNI GGTCTC 2 cut(s) 132, 1245
BsrBI CCGCTC 2 cut(s) 1980, 2485
BsrFI RCCGGY 5 cut(s) 1394, 1672, 1884, 2282, 3121
BsrGI TGTACA 2 cut(s) 658, 1800
BsrI ACTGG 2 cut(s) 872, 1540
BssAI RCCGGY 5 cut(s) 1394, 1672, 1884, 2282, 3121
BssHII GCGCGC 2 cut(s) 983, 2551
BssNAI GTATAC 3 cut(s) 2085, 2098, 2245
BssNI GRCGYC 6 cut(s) 74, 491, 686, 1128, 1490, 1938
BssT1I CCWWGG 3 cut(s) 835, 863, 1269
Bst1107I GTATAC 3 cut(s) 2085, 2098, 2245
Bst2UI CCWGG 2 cut(s) 528, 1770
Bst6I CTCTTC 4 cut(s) 341, 444, 968, 1784
BstACI GRCGYC 6 cut(s) 74, 491, 686, 1128, 1490, 1938
BstAPI GCANNNNNTGC 2 cut(s) 2665, 2923
BstAUI TGTACA 2 cut(s) 658, 1800
BstBAI YACGTR 7 cut(s) 88, 1338, 1849, 1870, 2256, 2722, 3040
BstDEI CTNAG 7 cut(s) 284, 294, 543, 618, 1247, 1350, 2894
BstDSI CCRYGG 3 cut(s) 835, 1614, 2984
BstEII GGTNACC 1 cut(s) 1397
BstF5I GGATG 9 cut(s) 211, 1134, 1347, 1994, 2002, 2602, 2904, 3091, 3117
BstH2I RGCGCY 2 cut(s) 494, 2966
BstMAI GTCTC 4 cut(s) 132, 1245, 2280, 2472
BstMCI CGRYCG 5 cut(s) 929, 1014, 1182, 1633, 1732
BstNI CCWGG 2 cut(s) 528, 1770
BstNSI RCATGY 3 cut(s) 916, 2512, 2542
BstPI GGTNACC 1 cut(s) 1397
BstSCI CCNGG 8 cut(s) 251, 526, 676, 1196, 1768, 2146, 2688, 2814
BstSFI CTRYAG 3 cut(s) 642, 1647, 2746
BstSLI GKGCMC 7 cut(s) 69, 1309, 1925, 2661, 2706, 2767, 2911
BstSNI TACGTA 1 cut(s) 2256
BstV1I GCAGC 8 cut(s) 121, 773, 904, 1874, 1887, 1912, 2380, 2661
BstV2I GAAGAC 2 cut(s) 1388, 1785
BstX2I RGATCY 6 cut(s) 276, 733, 2021, 2692, 2980, 2997
BstXI CCANNNNNNTGG 1 cut(s) 1342
BstYI RGATCY 6 cut(s) 276, 733, 2021, 2692, 2980, 2997
BstZ17I GTATAC 3 cut(s) 2085, 2098, 2245
BstZI CGGCCG 1 cut(s) 926
BsuI GTATCC 1 cut(s) 2268
BtgI CCRYGG 3 cut(s) 835, 1614, 2984
BtgZI GCGATG 2 cut(s) 3041, 3077
BtrI CACGTC 3 cut(s) 1047, 1231, 2973
BtsCI GGATG 9 cut(s) 211, 1134, 1347, 1994, 2002, 2602, 2904, 3091, 3117
BtsI GCAGTG 4 cut(s) 1026, 1286, 2375, 2663
BtsIMutI CAGTG 7 cut(s) 705, 1026, 1155, 1286, 1644, 2375, 2663
BveI ACCTGC 1 cut(s) 1827
CaiI CAGNNNCTG 2 cut(s) 509, 2965
CciI TCATGA 1 cut(s) 721
Cfr10I RCCGGY 5 cut(s) 1394, 1672, 1884, 2282, 3121
Cfr42I CCGCGG 2 cut(s) 1617, 2987
CspAI ACCGGT 1 cut(s) 1672
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviAII CATG 9 cut(s) 722, 766, 836, 913, 1165, 1312, 1486, 2509, 2539
DdeI CTNAG 7 cut(s) 284, 294, 543, 618, 1247, 1350, 2894
DinI GGCGCC 1 cut(s) 492
DraI TTTAAA 1 cut(s) 2092
DrdI GACNNNNNNGTC 1 cut(s) 1562
DseDI GACNNNNNNGTC 1 cut(s) 1562
EaeI YGGCCR 2 cut(s) 926, 2313
EagI CGGCCG 1 cut(s) 926
Eam1104I CTCTTC 4 cut(s) 341, 444, 968, 1784
EarI CTCTTC 4 cut(s) 341, 444, 968, 1784
EciI GGCGGA 4 cut(s) 563, 726, 1370, 2816
Ecl136II GAGCTC 2 cut(s) 217, 1933
EclXI CGGCCG 1 cut(s) 926
Eco105I TACGTA 1 cut(s) 2256
Eco130I CCWWGG 3 cut(s) 835, 863, 1269
Eco24I GRGCYC 7 cut(s) 83, 219, 1309, 1769, 1935, 2067, 2767
Eco31I GGTCTC 2 cut(s) 132, 1245
Eco47I GGWCC 7 cut(s) 245, 550, 1084, 1156, 1670, 2144, 2422
Eco52I CGGCCG 1 cut(s) 926
Eco53kI GAGCTC 2 cut(s) 217, 1933
Eco57I CTGAAG 2 cut(s) 672, 777
Eco72I CACGTG 2 cut(s) 1338, 1849
Eco88I CYCGRG 4 cut(s) 167, 269, 2486, 2760
Eco91I GGTNACC 1 cut(s) 1397
EcoICRI GAGCTC 2 cut(s) 217, 1933
EcoO109I RGGNCCY 4 cut(s) 1156, 1305, 2422, 2764
EcoO65I GGTNACC 1 cut(s) 1397
EcoRII CCWGG 2 cut(s) 526, 1768
EcoT14I CCWWGG 3 cut(s) 835, 863, 1269
EcoT38I GRGCYC 7 cut(s) 83, 219, 1309, 1769, 1935, 2067, 2767
EgeI GGCGCC 1 cut(s) 492
EheI GGCGCC 1 cut(s) 492
ErhI CCWWGG 3 cut(s) 835, 863, 1269
FaeI CATG 9 cut(s) 725, 769, 839, 916, 1168, 1315, 1489, 2512, 2542
FalI AAGNNNNNCTT 8 cut(s) 335, 367, 338, 370, 971, 1003, 2195, 2227
FaqI GGGAC 7 cut(s) 85, 395, 1097, 1169, 1528, 2169, 2831
FatI CATG 9 cut(s) 721, 765, 835, 912, 1164, 1311, 1485, 2508, 2538
FbaI TGATCA 1 cut(s) 724
FblI GTMKAC 5 cut(s) 1422, 1725, 2084, 2097, 2244
FokI GGATG 9 cut(s) 218, 1121, 1354, 2001, 2009, 2609, 2911, 3078, 3124
FriOI GRGCYC 7 cut(s) 83, 219, 1309, 1769, 1935, 2067, 2767
FspBI CTAG 2 cut(s) 1661, 2405
FspI TGCGCA 1 cut(s) 2432
GsaI CCCAGC 3 cut(s) 1531, 1922, 2930
GsuI CTGGAG 5 cut(s) 233, 917, 982, 1313, 2756
HaeII RGCGCY 2 cut(s) 494, 2966
Hin1I GRCGYC 6 cut(s) 74, 491, 686, 1128, 1490, 1938
Hin1II CATG 9 cut(s) 725, 769, 839, 916, 1168, 1315, 1489, 2512, 2542
HincII GTYRAC 4 cut(s) 690, 1500, 1726, 2812
HindII GTYRAC 4 cut(s) 690, 1500, 1726, 2812
HindIII AAGCTT 1 cut(s) 2891
HphI GGTGA 7 cut(s) 103, 383, 602, 988, 1558, 1987, 2980
HpyAV CCTTC 7 cut(s) 198, 529, 581, 973, 1102, 1108, 2382
HpyF3I CTNAG 7 cut(s) 284, 294, 543, 618, 1247, 1350, 2894
Hsp92I GRCGYC 6 cut(s) 74, 491, 686, 1128, 1490, 1938
Hsp92II CATG 9 cut(s) 725, 769, 839, 916, 1168, 1315, 1489, 2512, 2542
KasI GGCGCC 1 cut(s) 490
KflI GGGWCCC 1 cut(s) 1156
Kpn2I TCCGGA 1 cut(s) 2565
KroI GCCGGC 1 cut(s) 3121
KroNI GCCGGC 1 cut(s) 3123
Ksp22I TGATCA 1 cut(s) 724
KspI CCGCGG 2 cut(s) 1617, 2987
LguI GCTCTTC 2 cut(s) 341, 444
LmnI GCTCC 7 cut(s) 214, 652, 797, 898, 1618, 2062, 2211
Lsp1109I GCAGC 8 cut(s) 121, 773, 904, 1874, 1887, 1912, 2380, 2661
MaeI CTAG 2 cut(s) 1661, 2405
MaeIII GTNAC 5 cut(s) 1231, 1397, 1564, 1675, 2968
MbiI CCGCTC 2 cut(s) 1980, 2485
MflI RGATCY 6 cut(s) 276, 733, 2021, 2692, 2980, 2997
MlsI TGGCCA 1 cut(s) 2315
MluCI AATT 6 cut(s) 375, 830, 1143, 1239, 1638, 2557
MluI ACGCGT 6 cut(s) 1374, 1720, 2180, 2358, 2621, 2911
MluNI TGGCCA 1 cut(s) 2315
Mly113I GGCGCC 1 cut(s) 491
MlyI GAGTC 2 cut(s) 506, 1514
MmeI TCCRAC 6 cut(s) 304, 341, 465, 1149, 2325, 2363
Mox20I TGGCCA 1 cut(s) 2315
MroI TCCGGA 1 cut(s) 2565
MroNI GCCGGC 1 cut(s) 3121
MroXI GAANNNNTTC 2 cut(s) 263, 350
MscI TGGCCA 1 cut(s) 2315
MseI TTAA 4 cut(s) 1017, 1637, 2091, 2445
MslI CAYNNNNRTG 2 cut(s) 917, 1340
Msp20I TGGCCA 1 cut(s) 2315
MspA1I CMGCKG 7 cut(s) 112, 895, 1002, 1616, 1918, 2263, 2986
MspR9I CCNGG 8 cut(s) 253, 528, 678, 1198, 1770, 2148, 2690, 2816
Mva1269I GAATGC 1 cut(s) 1818
MvaI CCWGG 2 cut(s) 528, 1770
NaeI GCCGGC 1 cut(s) 3123
NarI GGCGCC 1 cut(s) 491
NciI CCSGG 6 cut(s) 253, 678, 1198, 2148, 2690, 2816
NcoI CCATGG 1 cut(s) 835
NgoMIV GCCGGC 1 cut(s) 3121
NheI GCTAGC 1 cut(s) 1660
NlaIII CATG 9 cut(s) 725, 769, 839, 916, 1168, 1315, 1489, 2512, 2542
NmeAIII GCCGAG 2 cut(s) 1914, 2874
NmuCI GTSAC 4 cut(s) 1231, 1564, 1675, 2968
NsbI TGCGCA 1 cut(s) 2432
NspI RCATGY 3 cut(s) 916, 2512, 2542
PaeI GCATGC 1 cut(s) 2542
PaeR7I CTCGAG 1 cut(s) 167
PagI TCATGA 1 cut(s) 721
PaqCI CACCTGC 1 cut(s) 1827
PauI GCGCGC 2 cut(s) 983, 2551
PciSI GCTCTTC 2 cut(s) 341, 444
PcsI WCGNNNNNNNCGW 9 cut(s) 80, 165, 174, 1719, 1854, 1875, 1935, 2326, 2826
PctI GAATGC 1 cut(s) 1818
PdiI GCCGGC 1 cut(s) 3123
PdmI GAANNNNTTC 2 cut(s) 263, 350
Pfl23II CGTACG 2 cut(s) 84, 1866
PflFI GACNNNGTC 2 cut(s) 1492, 1504
PfoI TCCNGGA 1 cut(s) 2688
PinAI ACCGGT 1 cut(s) 1672
Ple19I CGATCG 2 cut(s) 1014, 1633
PleI GAGTC 2 cut(s) 506, 1513
PluTI GGCGCC 1 cut(s) 494
PmaCI CACGTG 2 cut(s) 1338, 1849
PmlI CACGTG 2 cut(s) 1338, 1849
PpsI GAGTC 2 cut(s) 506, 1513
Ppu21I YACGTR 7 cut(s) 88, 1338, 1849, 1870, 2256, 2722, 3040
PpuMI RGGWCCY 2 cut(s) 1156, 2422
Psp124BI GAGCTC 2 cut(s) 219, 1935
Psp1406I AACGTT 2 cut(s) 177, 2808
Psp5II RGGWCCY 2 cut(s) 1156, 2422
Psp6I CCWGG 2 cut(s) 526, 1768
PspCI CACGTG 2 cut(s) 1338, 1849
PspEI GGTNACC 1 cut(s) 1397
PspFI CCCAGC 3 cut(s) 1527, 1918, 2926
PspGI CCWGG 2 cut(s) 526, 1768
PspLI CGTACG 2 cut(s) 84, 1866
PspOMI GGGCCC 2 cut(s) 1305, 2763
PspPPI RGGWCCY 2 cut(s) 1156, 2422
PspXI VCTCGAGB 1 cut(s) 167
PstNI CAGNNNCTG 2 cut(s) 509, 2965
PsuI RGATCY 6 cut(s) 276, 733, 2021, 2692, 2980, 2997
PsyI GACNNNGTC 2 cut(s) 1492, 1504
PteI GCGCGC 2 cut(s) 983, 2551
PvuI CGATCG 2 cut(s) 1014, 1633
PvuII CAGCTG 1 cut(s) 895
RseI CAYNNNNRTG 2 cut(s) 917, 1340
SacI GAGCTC 2 cut(s) 219, 1935
SacII CCGCGG 2 cut(s) 1617, 2987
SalI GTCGAC 1 cut(s) 1724
SapI GCTCTTC 2 cut(s) 341, 444
SaqAI TTAA 4 cut(s) 1017, 1637, 2091, 2445
SchI GAGTC 2 cut(s) 506, 1514
ScrFI CCNGG 8 cut(s) 253, 528, 678, 1198, 1770, 2148, 2690, 2816
SfcI CTRYAG 3 cut(s) 642, 1647, 2746
SfoI GGCGCC 1 cut(s) 492
Sfr274I CTCGAG 1 cut(s) 167
Sfr303I CCGCGG 2 cut(s) 1617, 2987
SgrBI CCGCGG 2 cut(s) 1617, 2987
SgrDI CGTCGACG 1 cut(s) 1724
SinI GGWCC 7 cut(s) 245, 550, 1084, 1156, 1670, 2144, 2422
SlaI CTCGAG 1 cut(s) 167
SmiMI CAYNNNNRTG 2 cut(s) 917, 1340
SmlI CTYRAG 3 cut(s) 167, 441, 1547
SmoI CTYRAG 3 cut(s) 167, 441, 1547
SnaBI TACGTA 1 cut(s) 2256
SphI GCATGC 1 cut(s) 2542
Sse9I AATT 6 cut(s) 375, 830, 1143, 1239, 1638, 2557
SspDI GGCGCC 1 cut(s) 490
SspMI CTAG 2 cut(s) 1661, 2405
SstI GAGCTC 2 cut(s) 219, 1935
StyD4I CCNGG 8 cut(s) 251, 526, 676, 1196, 1768, 2146, 2688, 2814
StyI CCWWGG 3 cut(s) 835, 863, 1269
TaqII GACCGA 2 cut(s) 1400, 1568
TasI AATT 6 cut(s) 375, 830, 1143, 1239, 1638, 2557
TatI WGTACW 2 cut(s) 658, 1800
Tru1I TTAA 4 cut(s) 1017, 1637, 2091, 2445
Tru9I TTAA 4 cut(s) 1017, 1637, 2091, 2445
TscAI CASTG 7 cut(s) 712, 1033, 1155, 1286, 1651, 2382, 2670
TseFI GTSAC 4 cut(s) 1231, 1564, 1675, 2968
TseI GCWGC 8 cut(s) 109, 761, 892, 1862, 1875, 1900, 2368, 2674
Tsp45I GTSAC 4 cut(s) 1231, 1564, 1675, 2968
TspDTI ATGAA 4 cut(s) 893, 979, 1328, 3124
TspRI CASTG 7 cut(s) 712, 1033, 1155, 1286, 1651, 2382, 2670
Tth111I GACNNNGTC 2 cut(s) 1492, 1504
VneI GTGCAC 1 cut(s) 2657
VpaK11BI GGWCC 7 cut(s) 245, 550, 1084, 1156, 1670, 2144, 2422
XapI RAATTY 3 cut(s) 830, 1143, 1239
XceI RCATGY 3 cut(s) 916, 2512, 2542
XhoI CTCGAG 1 cut(s) 167
XmiI GTMKAC 5 cut(s) 1422, 1725, 2084, 2097, 2244
XmnI GAANNNNTTC 2 cut(s) 263, 350
XspI CTAG 2 cut(s) 1661, 2405
ZraI GACGTC 2 cut(s) 75, 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.