Plant phosphoribosyltransferase C-terminal
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17980 |
| fragaria_vesca | FvH4_5g32500 |
| malus_domestica | MD14G1004500.v1.1 |
| prunus_persica | Prupe.7G007300_v2.0.a1 |
| pyrus_communis | pycom14g00300 |
| rosa_chinensis | RchiOBHm_Chr7g0229081 |
| rosa_laevigata | RLG00000001532 |
| rosa_multiflora | Rmu_co8189216.1_g000001 Rmu_sc0000271.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00230740 |
| rosa_rugosa | Rorug07G0255500 |
| rosa_samantha | Rh7AG406700 Rh7BG386100 Rh7CG424400 Rh7DG401000 |
| rosa_wichuraiana | Rw7G033760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1824, 2296 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1559 |
| AatII | GACGTC | 1 cut(s) | 689 |
| Acc36I | ACCTGC | 2 cut(s) | 1824, 2296 |
| AccB1I | GGYRCC | 5 cut(s) | 490, 625, 1919, 2842, 3040 |
| AccBSI | CCGCTC | 3 cut(s) | 1977, 2163, 2482 |
| AccI | GTMKAC | 4 cut(s) | 1722, 2081, 2094, 2241 |
| AccIII | TCCGGA | 1 cut(s) | 2562 |
| AclI | AACGTT | 2 cut(s) | 177, 2805 |
| AcoI | YGGCCR | 3 cut(s) | 920, 2310, 3505 |
| AcsI | RAATTY | 7 cut(s) | 824, 1137, 1236, 3253, 3454, 3571, 3696 |
| AcuI | CTGAAG | 3 cut(s) | 672, 771, 3650 |
| AcvI | CACGTG | 2 cut(s) | 1335, 1846 |
| AcyI | GRCGYC | 5 cut(s) | 491, 686, 1122, 1487, 1935 |
| AflIII | ACRYGT | 7 cut(s) | 1371, 1717, 2177, 2355, 2618, 2718, 2908 |
| AgeI | ACCGGT | 1 cut(s) | 1669 |
| AgsI | TTSAA | 9 cut(s) | 175, 368, 385, 823, 2287, 3127, 3454, 3569, 3863 |
| AjiI | CACGTC | 4 cut(s) | 75, 1041, 1228, 2970 |
| AjnI | CCWGG | 4 cut(s) | 526, 1347, 1765, 3788 |
| Alw21I | GWGCWC | 2 cut(s) | 219, 2658 |
| Alw26I | GTCTC | 4 cut(s) | 132, 1242, 2277, 2469 |
| Alw44I | GTGCAC | 1 cut(s) | 2654 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 509, 641, 650, 2962 |
| Ama87I | CYCGRG | 4 cut(s) | 167, 269, 2483, 2757 |
| Aor13HI | TCCGGA | 1 cut(s) | 2562 |
| ApaI | GGGCCC | 2 cut(s) | 1306, 2764 |
| ApaLI | GTGCAC | 1 cut(s) | 2654 |
| ApoI | RAATTY | 7 cut(s) | 824, 1137, 1236, 3253, 3454, 3571, 3696 |
| AsiGI | ACCGGT | 1 cut(s) | 1669 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 263, 2952, 3368, 3560 |
| AsuC2I | CCSGG | 5 cut(s) | 253, 678, 1195, 2145, 2687 |
| AsuII | TTCGAA | 2 cut(s) | 1071, 2151 |
| AsuNHI | GCTAGC | 1 cut(s) | 1657 |
| AvaI | CYCGRG | 4 cut(s) | 167, 269, 2483, 2757 |
| AvaII | GGWCC | 7 cut(s) | 245, 550, 733, 1078, 1150, 2040, 2141 |
| AxyI | CCTNAGG | 1 cut(s) | 3543 |
| BaeGI | GKGCMC | 7 cut(s) | 69, 1306, 1922, 2658, 2703, 2764, 2908 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2176, 2209 |
| BalI | TGGCCA | 2 cut(s) | 2312, 3507 |
| BamHI | GGATCC | 4 cut(s) | 276, 2018, 2977, 3820 |
| BanI | GGYRCC | 5 cut(s) | 490, 625, 1919, 2842, 3040 |
| BanII | GRGCYC | 6 cut(s) | 83, 219, 1306, 1766, 2064, 2764 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 377, 409, 935, 967 |
| BbrPI | CACGTG | 2 cut(s) | 1335, 1846 |
| BbsI | GAAGAC | 2 cut(s) | 1385, 1782 |
| Bbv12I | GWGCWC | 2 cut(s) | 219, 2658 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 988, 1022, 2635, 2669 |
| BciT130I | CCWGG | 4 cut(s) | 528, 1349, 1767, 3790 |
| BciVI | GTATCC | 1 cut(s) | 2265 |
| BclI | TGATCA | 1 cut(s) | 724 |
| BcnI | CCSGG | 5 cut(s) | 253, 678, 1195, 2145, 2687 |
| BcoDI | GTCTC | 4 cut(s) | 132, 1242, 2277, 2469 |
| BfaI | CTAG | 4 cut(s) | 1133, 1658, 2402, 3360 |
| BfmI | CTRYAG | 8 cut(s) | 642, 1644, 1798, 2743, 3181, 3526, 3633, 3873 |
| BfoI | RGCGCY | 3 cut(s) | 494, 2963, 3319 |
| BfuAI | ACCTGC | 2 cut(s) | 1824, 2296 |
| BfuI | GTATCC | 1 cut(s) | 2265 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2485 |
| Bme1390I | CCNGG | 9 cut(s) | 253, 528, 678, 1195, 1349, 1767, 2145, 2687, 3790 |
| Bme18I | GGWCC | 7 cut(s) | 245, 550, 733, 1078, 1150, 2040, 2141 |
| BmeT110I | CYCGRG | 4 cut(s) | 167, 269, 2483, 2757 |
| BmgBI | CACGTC | 4 cut(s) | 75, 1041, 1228, 2970 |
| BmrFI | CCNGG | 9 cut(s) | 253, 528, 678, 1195, 1349, 1767, 2145, 2687, 3790 |
| BmtI | GCTAGC | 1 cut(s) | 1661 |
| BpiI | GAAGAC | 2 cut(s) | 1385, 1782 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 277, 309, 1175, 1207 |
| BpmI | CTGGAG | 4 cut(s) | 233, 911, 1310, 2753 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2137, 2891 |
| Bpu14I | TTCGAA | 2 cut(s) | 1071, 2151 |
| BpuEI | CTTGAG | 2 cut(s) | 426, 1529 |
| BpuMI | CCSGG | 5 cut(s) | 253, 678, 1195, 2145, 2687 |
| Bsa29I | ATCGAT | 1 cut(s) | 3717 |
| BsaAI | YACGTR | 6 cut(s) | 88, 1335, 1846, 2253, 2719, 3037 |
| BsaBI | GATNNNNATC | 1 cut(s) | 717 |
| BsaHI | GRCGYC | 5 cut(s) | 491, 686, 1122, 1487, 1935 |
| BsaI | GGTCTC | 2 cut(s) | 132, 1242 |
| BsaWI | WCCGGW | 3 cut(s) | 583, 1669, 2562 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 631, 661 |
| Bse118I | RCCGGY | 5 cut(s) | 1391, 1669, 1881, 2279, 3118 |
| Bse1I | ACTGG | 4 cut(s) | 866, 1537, 2670, 3265 |
| Bse21I | CCTNAGG | 1 cut(s) | 3543 |
| Bse3DI | GCAATG | 2 cut(s) | 3531, 3809 |
| Bse8I | GATNNNNATC | 1 cut(s) | 717 |
| BseAI | TCCGGA | 1 cut(s) | 2562 |
| BseBI | CCWGG | 4 cut(s) | 528, 1349, 1767, 3790 |
| BseCI | ATCGAT | 1 cut(s) | 3717 |
| BseJI | GATNNNNATC | 1 cut(s) | 717 |
| BseMI | GCAATG | 2 cut(s) | 3531, 3809 |
| BseMII | CTCAG | 7 cut(s) | 275, 308, 609, 1235, 2151, 3467, 3534 |
| BseNI | ACTGG | 4 cut(s) | 866, 1537, 2670, 3265 |
| BsePI | GCGCGC | 2 cut(s) | 977, 2548 |
| BseRI | GAGGAG | 3 cut(s) | 329, 464, 2843 |
| BseSI | GKGCMC | 7 cut(s) | 69, 1306, 1922, 2658, 2703, 2764, 2908 |
| BseX3I | CGGCCG | 1 cut(s) | 920 |
| BseYI | CCCAGC | 3 cut(s) | 1524, 1915, 2923 |
| BsgI | GTGCAG | 6 cut(s) | 405, 453, 1891, 2324, 2933, 3536 |
| Bsh1285I | CGRYCG | 6 cut(s) | 923, 1008, 1176, 1630, 1729, 2161 |
| BshNI | GGYRCC | 5 cut(s) | 490, 625, 1919, 2842, 3040 |
| BshTI | ACCGGT | 1 cut(s) | 1669 |
| BshVI | ATCGAT | 1 cut(s) | 3717 |
| BsiEI | CGRYCG | 6 cut(s) | 923, 1008, 1176, 1630, 1729, 2161 |
| BsiHKAI | GWGCWC | 2 cut(s) | 219, 2658 |
| BsiHKCI | CYCGRG | 4 cut(s) | 167, 269, 2483, 2757 |
| BsiWI | CGTACG | 1 cut(s) | 84 |
| BslFI | GGGAC | 6 cut(s) | 395, 746, 1091, 1163, 1525, 2166 |
| BsmAI | GTCTC | 4 cut(s) | 132, 1242, 2277, 2469 |
| BsmFI | GGGAC | 6 cut(s) | 395, 746, 1091, 1163, 1525, 2166 |
| BsmI | GAATGC | 1 cut(s) | 1815 |
| Bso31I | GGTCTC | 2 cut(s) | 132, 1242 |
| BsoBI | CYCGRG | 4 cut(s) | 167, 269, 2483, 2757 |
| Bsp119I | TTCGAA | 2 cut(s) | 1071, 2151 |
| Bsp120I | GGGCCC | 2 cut(s) | 1302, 2760 |
| Bsp13I | TCCGGA | 1 cut(s) | 2562 |
| Bsp1407I | TGTACA | 2 cut(s) | 658, 3926 |
| BspCNI | CTCAG | 7 cut(s) | 276, 307, 610, 1236, 2150, 3468, 3535 |
| BspDI | ATCGAT | 1 cut(s) | 3717 |
| BspEI | TCCGGA | 1 cut(s) | 2562 |
| BspHI | TCATGA | 2 cut(s) | 721, 3727 |
| BspMAI | CTGCAG | 3 cut(s) | 646, 3530, 3637 |
| BspMI | ACCTGC | 2 cut(s) | 1824, 2296 |
| BspOI | GCTAGC | 1 cut(s) | 1661 |
| BspQI | GCTCTTC | 1 cut(s) | 341 |
| BspT104I | TTCGAA | 2 cut(s) | 1071, 2151 |
| BspT107I | GGYRCC | 5 cut(s) | 490, 625, 1919, 2842, 3040 |
| BspTNI | GGTCTC | 2 cut(s) | 132, 1242 |
| BsrBI | CCGCTC | 3 cut(s) | 1977, 2163, 2482 |
| BsrDI | GCAATG | 2 cut(s) | 3531, 3809 |
| BsrFI | RCCGGY | 5 cut(s) | 1391, 1669, 1881, 2279, 3118 |
| BsrGI | TGTACA | 2 cut(s) | 658, 3926 |
| BsrI | ACTGG | 4 cut(s) | 866, 1537, 2670, 3265 |
| BssAI | RCCGGY | 5 cut(s) | 1391, 1669, 1881, 2279, 3118 |
| BssHII | GCGCGC | 2 cut(s) | 977, 2548 |
| BssNAI | GTATAC | 3 cut(s) | 2082, 2095, 2242 |
| BssNI | GRCGYC | 5 cut(s) | 491, 686, 1122, 1487, 1935 |
| BssT1I | CCWWGG | 3 cut(s) | 857, 1266, 3778 |
| Bst1107I | GTATAC | 3 cut(s) | 2082, 2095, 2242 |
| Bst2UI | CCWGG | 4 cut(s) | 528, 1349, 1767, 3790 |
| Bst6I | CTCTTC | 4 cut(s) | 110, 341, 962, 1781 |
| BstACI | GRCGYC | 5 cut(s) | 491, 686, 1122, 1487, 1935 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2920 |
| BstAUI | TGTACA | 2 cut(s) | 658, 3926 |
| BstBAI | YACGTR | 6 cut(s) | 88, 1335, 1846, 2253, 2719, 3037 |
| BstBI | TTCGAA | 2 cut(s) | 1071, 2151 |
| BstDEI | CTNAG | 9 cut(s) | 284, 294, 543, 618, 1244, 2137, 2891, 3476, 3543 |
| BstDSI | CCRYGG | 2 cut(s) | 829, 1611 |
| BstEII | GGTNACC | 1 cut(s) | 1394 |
| BstH2I | RGCGCY | 3 cut(s) | 494, 2963, 3319 |
| BstMAI | GTCTC | 4 cut(s) | 132, 1242, 2277, 2469 |
| BstMCI | CGRYCG | 6 cut(s) | 923, 1008, 1176, 1630, 1729, 2161 |
| BstNI | CCWGG | 4 cut(s) | 528, 1349, 1767, 3790 |
| BstNSI | RCATGY | 3 cut(s) | 910, 2539, 3273 |
| BstPI | GGTNACC | 1 cut(s) | 1394 |
| BstSCI | CCNGG | 9 cut(s) | 251, 526, 676, 1193, 1347, 1765, 2143, 2685, 3788 |
| BstSFI | CTRYAG | 8 cut(s) | 642, 1644, 1798, 2743, 3181, 3526, 3633, 3873 |
| BstSLI | GKGCMC | 7 cut(s) | 69, 1306, 1922, 2658, 2703, 2764, 2908 |
| BstSNI | TACGTA | 1 cut(s) | 2253 |
| BstV2I | GAAGAC | 2 cut(s) | 1385, 1782 |
| BstX2I | RGATCY | 8 cut(s) | 276, 2018, 2202, 2689, 2977, 2994, 3436, 3820 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1339 |
| BstYI | RGATCY | 8 cut(s) | 276, 2018, 2202, 2689, 2977, 2994, 3436, 3820 |
| BstZ17I | GTATAC | 3 cut(s) | 2082, 2095, 2242 |
| BstZI | CGGCCG | 1 cut(s) | 920 |
| Bsu15I | ATCGAT | 1 cut(s) | 3717 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3543 |
| BsuI | GTATCC | 1 cut(s) | 2265 |
| BsuTUI | ATCGAT | 1 cut(s) | 3717 |
| BtgI | CCRYGG | 2 cut(s) | 829, 1611 |
| BtgZI | GCGATG | 2 cut(s) | 3038, 3074 |
| BtrI | CACGTC | 4 cut(s) | 75, 1041, 1228, 2970 |
| BtsI | GCAGTG | 3 cut(s) | 1020, 1283, 2372 |
| BtsIMutI | CAGTG | 7 cut(s) | 705, 1020, 1149, 1283, 1641, 2372, 3971 |
| BveI | ACCTGC | 2 cut(s) | 1824, 2296 |
| CaiI | CAGNNNCTG | 4 cut(s) | 509, 641, 650, 2962 |
| CciI | TCATGA | 2 cut(s) | 721, 3727 |
| Cfr10I | RCCGGY | 5 cut(s) | 1391, 1669, 1881, 2279, 3118 |
| Cfr42I | CCGCGG | 1 cut(s) | 1614 |
| ClaI | ATCGAT | 1 cut(s) | 3717 |
| CpoI | CGGWCCG | 1 cut(s) | 2040 |
| CspAI | ACCGGT | 1 cut(s) | 1669 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 280, 315 |
| CspI | CGGWCCG | 1 cut(s) | 2040 |
| DdeI | CTNAG | 9 cut(s) | 284, 294, 543, 618, 1244, 2137, 2891, 3476, 3543 |
| DinI | GGCGCC | 1 cut(s) | 492 |
| DraI | TTTAAA | 1 cut(s) | 2089 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1559 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1559 |
| EaeI | YGGCCR | 3 cut(s) | 920, 2310, 3505 |
| EagI | CGGCCG | 1 cut(s) | 920 |
| Eam1104I | CTCTTC | 4 cut(s) | 110, 341, 962, 1781 |
| EarI | CTCTTC | 4 cut(s) | 110, 341, 962, 1781 |
| EciI | GGCGGA | 5 cut(s) | 563, 589, 1367, 2813, 3606 |
| Ecl136II | GAGCTC | 1 cut(s) | 217 |
| EclXI | CGGCCG | 1 cut(s) | 920 |
| Eco105I | TACGTA | 1 cut(s) | 2253 |
| Eco130I | CCWWGG | 3 cut(s) | 857, 1266, 3778 |
| Eco24I | GRGCYC | 6 cut(s) | 83, 219, 1306, 1766, 2064, 2764 |
| Eco31I | GGTCTC | 2 cut(s) | 132, 1242 |
| Eco32I | GATATC | 1 cut(s) | 3802 |
| Eco47I | GGWCC | 7 cut(s) | 245, 550, 733, 1078, 1150, 2040, 2141 |
| Eco52I | CGGCCG | 1 cut(s) | 920 |
| Eco53kI | GAGCTC | 1 cut(s) | 217 |
| Eco57I | CTGAAG | 3 cut(s) | 672, 771, 3650 |
| Eco72I | CACGTG | 2 cut(s) | 1335, 1846 |
| Eco81I | CCTNAGG | 1 cut(s) | 3543 |
| Eco88I | CYCGRG | 4 cut(s) | 167, 269, 2483, 2757 |
| Eco91I | GGTNACC | 1 cut(s) | 1394 |
| EcoICRI | GAGCTC | 1 cut(s) | 217 |
| EcoO109I | RGGNCCY | 4 cut(s) | 733, 1150, 1302, 2761 |
| EcoO65I | GGTNACC | 1 cut(s) | 1394 |
| EcoRI | GAATTC | 2 cut(s) | 3454, 3696 |
| EcoRII | CCWGG | 4 cut(s) | 526, 1347, 1765, 3788 |
| EcoRV | GATATC | 1 cut(s) | 3802 |
| EcoT14I | CCWWGG | 3 cut(s) | 857, 1266, 3778 |
| EcoT22I | ATGCAT | 1 cut(s) | 3275 |
| EcoT38I | GRGCYC | 6 cut(s) | 83, 219, 1306, 1766, 2064, 2764 |
| EgeI | GGCGCC | 1 cut(s) | 492 |
| EheI | GGCGCC | 1 cut(s) | 492 |
| ErhI | CCWWGG | 3 cut(s) | 857, 1266, 3778 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 338, 370, 965, 997, 3545, 3577 |
| FaqI | GGGAC | 6 cut(s) | 395, 746, 1091, 1163, 1525, 2166 |
| FbaI | TGATCA | 1 cut(s) | 724 |
| FblI | GTMKAC | 4 cut(s) | 1722, 2081, 2094, 2241 |
| FriOI | GRGCYC | 6 cut(s) | 83, 219, 1306, 1766, 2064, 2764 |
| FspBI | CTAG | 4 cut(s) | 1133, 1658, 2402, 3360 |
| GsaI | CCCAGC | 3 cut(s) | 1528, 1919, 2927 |
| GsuI | CTGGAG | 4 cut(s) | 233, 911, 1310, 2753 |
| HaeII | RGCGCY | 3 cut(s) | 494, 2963, 3319 |
| Hin1I | GRCGYC | 5 cut(s) | 491, 686, 1122, 1487, 1935 |
| HincII | GTYRAC | 5 cut(s) | 690, 770, 1497, 1723, 2809 |
| HindII | GTYRAC | 5 cut(s) | 690, 770, 1497, 1723, 2809 |
| HindIII | AAGCTT | 2 cut(s) | 2888, 3201 |
| HpyF3I | CTNAG | 9 cut(s) | 284, 294, 543, 618, 1244, 2137, 2891, 3476, 3543 |
| Hsp92I | GRCGYC | 5 cut(s) | 491, 686, 1122, 1487, 1935 |
| KasI | GGCGCC | 1 cut(s) | 490 |
| KflI | GGGWCCC | 2 cut(s) | 733, 1150 |
| Kpn2I | TCCGGA | 1 cut(s) | 2562 |
| KroI | GCCGGC | 1 cut(s) | 3118 |
| KroNI | GCCGGC | 1 cut(s) | 3120 |
| Ksp22I | TGATCA | 1 cut(s) | 724 |
| KspI | CCGCGG | 1 cut(s) | 1614 |
| LguI | GCTCTTC | 1 cut(s) | 341 |
| MaeI | CTAG | 4 cut(s) | 1133, 1658, 2402, 3360 |
| MaeIII | GTNAC | 8 cut(s) | 1228, 1394, 1561, 1672, 2813, 2965, 3322, 3547 |
| MbiI | CCGCTC | 3 cut(s) | 1977, 2163, 2482 |
| MfeI | CAATTG | 1 cut(s) | 3959 |
| MflI | RGATCY | 8 cut(s) | 276, 2018, 2202, 2689, 2977, 2994, 3436, 3820 |
| MlsI | TGGCCA | 2 cut(s) | 2312, 3507 |
| MluI | ACGCGT | 6 cut(s) | 1371, 1717, 2177, 2355, 2618, 2908 |
| MluNI | TGGCCA | 2 cut(s) | 2312, 3507 |
| Mly113I | GGCGCC | 1 cut(s) | 491 |
| MlyI | GAGTC | 3 cut(s) | 506, 1511, 2513 |
| MmeI | TCCRAC | 6 cut(s) | 304, 341, 1143, 2322, 2360, 3471 |
| Mox20I | TGGCCA | 2 cut(s) | 2312, 3507 |
| Mph1103I | ATGCAT | 1 cut(s) | 3275 |
| MroI | TCCGGA | 1 cut(s) | 2562 |
| MroNI | GCCGGC | 1 cut(s) | 3118 |
| MroXI | GAANNNNTTC | 4 cut(s) | 263, 2952, 3368, 3560 |
| MscI | TGGCCA | 2 cut(s) | 2312, 3507 |
| MseI | TTAA | 8 cut(s) | 1011, 1634, 2088, 2442, 3426, 3596, 3648, 3834 |
| MslI | CAYNNNNRTG | 4 cut(s) | 911, 1337, 3331, 3738 |
| Msp20I | TGGCCA | 2 cut(s) | 2312, 3507 |
| MspA1I | CMGCKG | 8 cut(s) | 112, 840, 889, 996, 1613, 1915, 2260, 3299 |
| MspR9I | CCNGG | 9 cut(s) | 253, 528, 678, 1195, 1349, 1767, 2145, 2687, 3790 |
| MunI | CAATTG | 1 cut(s) | 3959 |
| Mva1269I | GAATGC | 1 cut(s) | 1815 |
| MvaI | CCWGG | 4 cut(s) | 528, 1349, 1767, 3790 |
| NaeI | GCCGGC | 1 cut(s) | 3120 |
| NarI | GGCGCC | 1 cut(s) | 491 |
| NciI | CCSGG | 5 cut(s) | 253, 678, 1195, 2145, 2687 |
| NgoMIV | GCCGGC | 1 cut(s) | 3118 |
| NheI | GCTAGC | 1 cut(s) | 1657 |
| NmeAIII | GCCGAG | 3 cut(s) | 1911, 2871, 3667 |
| NmuCI | GTSAC | 6 cut(s) | 1228, 1561, 1672, 2813, 2965, 3547 |
| NsiI | ATGCAT | 1 cut(s) | 3275 |
| NspI | RCATGY | 3 cut(s) | 910, 2539, 3273 |
| NspV | TTCGAA | 2 cut(s) | 1071, 2151 |
| PaeI | GCATGC | 1 cut(s) | 2539 |
| PaeR7I | CTCGAG | 1 cut(s) | 167 |
| PagI | TCATGA | 2 cut(s) | 721, 3727 |
| PaqCI | CACCTGC | 2 cut(s) | 1824, 2296 |
| PauI | GCGCGC | 2 cut(s) | 977, 2548 |
| PciSI | GCTCTTC | 1 cut(s) | 341 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 80, 165, 174, 1716, 1851, 2323, 2823 |
| PctI | GAATGC | 1 cut(s) | 1815 |
| PdiI | GCCGGC | 1 cut(s) | 3120 |
| PdmI | GAANNNNTTC | 4 cut(s) | 263, 2952, 3368, 3560 |
| Pfl23II | CGTACG | 1 cut(s) | 84 |
| PflFI | GACNNNGTC | 2 cut(s) | 1489, 1501 |
| PfoI | TCCNGGA | 1 cut(s) | 2685 |
| PinAI | ACCGGT | 1 cut(s) | 1669 |
| Ple19I | CGATCG | 2 cut(s) | 1008, 1630 |
| PleI | GAGTC | 3 cut(s) | 506, 1510, 2513 |
| PluTI | GGCGCC | 1 cut(s) | 494 |
| PmaCI | CACGTG | 2 cut(s) | 1335, 1846 |
| PmlI | CACGTG | 2 cut(s) | 1335, 1846 |
| PpsI | GAGTC | 3 cut(s) | 506, 1510, 2513 |
| Ppu21I | YACGTR | 6 cut(s) | 88, 1335, 1846, 2253, 2719, 3037 |
| PpuMI | RGGWCCY | 2 cut(s) | 733, 1150 |
| Psp124BI | GAGCTC | 1 cut(s) | 219 |
| Psp1406I | AACGTT | 2 cut(s) | 177, 2805 |
| Psp5II | RGGWCCY | 2 cut(s) | 733, 1150 |
| Psp6I | CCWGG | 4 cut(s) | 526, 1347, 1765, 3788 |
| PspCI | CACGTG | 2 cut(s) | 1335, 1846 |
| PspEI | GGTNACC | 1 cut(s) | 1394 |
| PspFI | CCCAGC | 3 cut(s) | 1524, 1915, 2923 |
| PspGI | CCWGG | 4 cut(s) | 526, 1347, 1765, 3788 |
| PspLI | CGTACG | 1 cut(s) | 84 |
| PspOMI | GGGCCC | 2 cut(s) | 1302, 2760 |
| PspPPI | RGGWCCY | 2 cut(s) | 733, 1150 |
| PspXI | VCTCGAGB | 1 cut(s) | 167 |
| PstI | CTGCAG | 3 cut(s) | 646, 3530, 3637 |
| PstNI | CAGNNNCTG | 4 cut(s) | 509, 641, 650, 2962 |
| PsuI | RGATCY | 8 cut(s) | 276, 2018, 2202, 2689, 2977, 2994, 3436, 3820 |
| PsyI | GACNNNGTC | 2 cut(s) | 1489, 1501 |
| PteI | GCGCGC | 2 cut(s) | 977, 2548 |
| PvuI | CGATCG | 2 cut(s) | 1008, 1630 |
| PvuII | CAGCTG | 2 cut(s) | 889, 3299 |
| RseI | CAYNNNNRTG | 4 cut(s) | 911, 1337, 3331, 3738 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2040 |
| RsrII | CGGWCCG | 1 cut(s) | 2040 |
| SacI | GAGCTC | 1 cut(s) | 219 |
| SacII | CCGCGG | 1 cut(s) | 1614 |
| SalI | GTCGAC | 1 cut(s) | 1721 |
| SapI | GCTCTTC | 1 cut(s) | 341 |
| SaqAI | TTAA | 8 cut(s) | 1011, 1634, 2088, 2442, 3426, 3596, 3648, 3834 |
| SchI | GAGTC | 3 cut(s) | 506, 1511, 2513 |
| ScrFI | CCNGG | 9 cut(s) | 253, 528, 678, 1195, 1349, 1767, 2145, 2687, 3790 |
| SfcI | CTRYAG | 8 cut(s) | 642, 1644, 1798, 2743, 3181, 3526, 3633, 3873 |
| SfoI | GGCGCC | 1 cut(s) | 492 |
| Sfr274I | CTCGAG | 1 cut(s) | 167 |
| Sfr303I | CCGCGG | 1 cut(s) | 1614 |
| SfuI | TTCGAA | 2 cut(s) | 1071, 2151 |
| SgrBI | CCGCGG | 1 cut(s) | 1614 |
| SgrDI | CGTCGACG | 1 cut(s) | 1721 |
| SinI | GGWCC | 7 cut(s) | 245, 550, 733, 1078, 1150, 2040, 2141 |
| SlaI | CTCGAG | 1 cut(s) | 167 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 911, 1337, 3331, 3738 |
| SmlI | CTYRAG | 3 cut(s) | 167, 441, 1544 |
| SmoI | CTYRAG | 3 cut(s) | 167, 441, 1544 |
| SnaBI | TACGTA | 1 cut(s) | 2253 |
| SphI | GCATGC | 1 cut(s) | 2539 |
| SspDI | GGCGCC | 1 cut(s) | 490 |
| SspI | AATATT | 1 cut(s) | 3341 |
| SspMI | CTAG | 4 cut(s) | 1133, 1658, 2402, 3360 |
| SstI | GAGCTC | 1 cut(s) | 219 |
| StyD4I | CCNGG | 9 cut(s) | 251, 526, 676, 1193, 1347, 1765, 2143, 2685, 3788 |
| StyI | CCWWGG | 3 cut(s) | 857, 1266, 3778 |
| TaqII | GACCGA | 2 cut(s) | 1397, 1565 |
| TatI | WGTACW | 2 cut(s) | 658, 3926 |
| Tru1I | TTAA | 8 cut(s) | 1011, 1634, 2088, 2442, 3426, 3596, 3648, 3834 |
| Tru9I | TTAA | 8 cut(s) | 1011, 1634, 2088, 2442, 3426, 3596, 3648, 3834 |
| TscAI | CASTG | 7 cut(s) | 712, 1027, 1149, 1283, 1648, 2379, 3978 |
| TseFI | GTSAC | 6 cut(s) | 1228, 1561, 1672, 2813, 2965, 3547 |
| Tsp45I | GTSAC | 6 cut(s) | 1228, 1561, 1672, 2813, 2965, 3547 |
| TspDTI | ATGAA | 5 cut(s) | 887, 1325, 3121, 3716, 3962 |
| TspRI | CASTG | 7 cut(s) | 712, 1027, 1149, 1283, 1648, 2379, 3978 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1489, 1501 |
| VneI | GTGCAC | 1 cut(s) | 2654 |
| VpaK11BI | GGWCC | 7 cut(s) | 245, 550, 733, 1078, 1150, 2040, 2141 |
| XapI | RAATTY | 7 cut(s) | 824, 1137, 1236, 3253, 3454, 3571, 3696 |
| XceI | RCATGY | 3 cut(s) | 910, 2539, 3273 |
| XhoI | CTCGAG | 1 cut(s) | 167 |
| XmiI | GTMKAC | 4 cut(s) | 1722, 2081, 2094, 2241 |
| XmnI | GAANNNNTTC | 4 cut(s) | 263, 2952, 3368, 3560 |
| XspI | CTAG | 4 cut(s) | 1133, 1658, 2402, 3360 |
| ZraI | GACGTC | 1 cut(s) | 687 |
| Zsp2I | ATGCAT | 1 cut(s) | 3275 |