Rh7BG386100

Plant phosphoribosyltransferase C-terminal

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
41828364 .. 41832062
3699 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG386100.1

Sequence Viewer

Length: 3138 bp
ATGGCTACTGTTCGGAAGCTAATAGTTGAGGTGGTTGACGCACGCGACCTTCCGCCGAAAGACGGCCACGGCACGGTGAGTCCATACGTTGTGGTAGACTACTATGGACAGCGAAAACGAACCCAGACGGTGATCAAGGACCTGAACCCTAAATGGAACGAGCTGCTCGAGTTCAACGTCGGCAAGGCCTCCGACGCCACCGTGTTTGGGGATGTGCTGGAGCTCGACGTATATCATGATAAGAACTACGGCCCCACCACCCGGAACAACTTCCTCGGCCGGCTCCGGCTGACCTCCTCTCAGTTTGTGAAGAAAGGCGAGGAGGCTCTTATATATTTTCCTTTGCAGAAGAAGAGCCTCTTCAGTTTTATTCAAGGCGACATTGGCCTAAAGATTTATTACCTAGATGAGCCTCCTCAACCTCCTCCGCCGCCGCCGGAGGAACCCAAGCCTGCTGAGACCACGCCACCTCCGCCGCCGGAGGAAACTAAACCTGCTGAAGCTACCCCACCTCCACCGGCGAAGGAGGTCGCACCACCACCCCCGGAATCTGAGAAGAAAGAAGACGCAGCGCCACCTGTAACCGAGCAACCACCGCCGTCGGAAAGCGAGAAGCCTGCTGATGAACCACCGGCTGAACCGGCAGCGCAACCACCGGAAACCGCAGCTGCTGAAGTCGGAGAATCCGATCCGCCACCGCCACCGCCACCTCCGCCACCAGAAATCTCAGGCGACGTGCCTGTGCCAGATCGGCATGATCATATTGAAATGATGGCAGCTTCTTCTGTATCGAAATCAGTGCCGGAAATCAATTTCGTCGGTGGAATCAACGGTCCACAGCCAATGGCTCGGCGGCCTTCAGGGGTACCCAGCTACACACAGCTGGAGCCAACCGAAAGTATGTCAATCGATCGTCCAACGTCGTTTGATCTGGTGGAGAAGATGCACTACCTCTTCGTCCGAGTGGTCAAGGCCCGGTACCTCCCCGCCAACGGCAGACCCGTCGTGAAGATCTCCGCTTCCAACTACCACGTGACGTCAACTCCCGCCAGAAAAACCAACTGCTTCGAGTGGGACCAGACCTTCGCTTTCGGCCGCCAGTCGCCGGACTCCGCTTCCATCCTCGAAGTCTCCGTGTGGGACCCGCCCGTCCCCGACCCCACCGGCATGGCCTCCGGGCACAACTTCCTCGGCGGAGTTTGTTTCGACGTGGCGGAGATCCCGCTGCGGGACCCGCCGGACAGCCCCTTGGCCCCGCAATGGTACAGACTCGAGGGAGGTGGGTCCCGCATCAACGGTGATTTGATGCTCGCCACGTGGCTGGGAACCCAAGCTGACGAGTCGTTTCCTGACGCGTGGAAGACCGACACAGCTGGAAACCTTAATGCACGCGCCAAGGTGTACCAGTCCCCGAAGCTCTGGTATCTCCGAGCAACGGTGCTCGAAGCGCAAGACGTTGTCCCCATAACGGCGTCGTTAAAGGAAGCCACATTCCAAGTCAAAGCCCAGCTCGGGTTCCAGTCTTTCAAGACGGAACCATCCCTCACTCGAAACGGCACGCCGTCTTGGAACCAGGACTTGATATTCGTGGCCGCCGAGCCGTTCACCGATCACTTGGTTTTCGTGCTGGAGAACAGGCAACCGAAAGGGACGGTCACATTGGGCTTTGCGAAGATACCACTCACCGCCATTGAACGACGTGTCGACGACCGGAAAGTTGCGTCGAAATGGATCAGCTTGGAGGATCCAAAAGACGAGAAGAGGGTATACAGCGGAAGAATGCACGTGCGGATTTGCTTCGACGGGGGATATCACGTGATGGATGAAGCGGCGCACGTGTGCAGCGACTACCGCCCCACGGCGAGGCAGCTGTGGAAGCCTCCGGTTGGCACCGTCGAGCTTGGTATTATCGGGTGCAAGAACTTGATACCGGTCAAGACGGTAAACGGTAAAGGATGTACAGACGCGTATTGTGTTGCTAAGTATGGGTCAAAGTGGATACGTACTCGGACCGTATGCGATAGCTTGGAGCCCAAGTGGAACGAGCAGTACACTTTCAAGGTGTTTGATCCTTGTACAGTGTTGAGTATTGGTGTTTTTGATAGCAACGGAGTCTTCGAAACAGACGGCCCAAGGGAAGCCACGCGTCTGGACTTTCGAATTGGGAAGGTACGTGTACGTATATCTACTCTGACTACGGGTAGAGTGTACAAGCATACATATCCGTTGTTGGTCTTGTCTCCGGCGGGTTTGAAGAAAATGGGTGAGGTGGAGATTGCCATACGCTTTGCTCGTGTGAGTCCAACCTTGGATTTGGTCCACGCGTACTCGCAGCCTTTATTGCCGTTGATGCACCACATAAAGCCACTAGGAGTGGGCCAACAAGACATGCTGAGACGAGCGGCGGTGAAGATCGTGGCCGCACATTTGTCACGATCAGAACCGCCGCTTGGACGCGAGACTGTTCTCTACATGTTGGATGCGGATTCACAAGGGTTTAGCATGAGGAAAGTTCGGGCCAATTATTTCCGGATCATCAATGTCGTAGCGGGGGTGATGGACATTGTTGGGTGGATAAACGACACGCGTTCGTGGAAGAATCCGATGGCTACTATTCTGGTGCACGCATTGTTGGTGCTGCTTGTGTGGTTTCCTGATTTGATAATCCCAACTTTGTTGTTCTACGTGTTCGCAATCGGAGCTTGGAACTATAGGTTCCGTTCTCGGGTCCCACTTCAACACTTTGATCCGAAGCTCTCATTGGCTGATACAGTTGACCGTGATGAACTTGACGAGGAGATCGATATGGTGCCAAGCACCAGATCATATGAGGTAGTACGGGCAAGGTACGACAAGCTACGGACGCTTGGGGCACGTGTGCAGACGGTACTGGGGGATTTTGCCACGCAAGGAGAGCGCGTGCAGGCGTTGGTGACGTGGCGTGATCCACGTGCGACGGGGATTTTTGTTGGACTGTGCTTTGTGGTAGCGATGATATTGTACCTGGTTCCGTCGAAGATGGTGGCAATGGCGTTCGGGTTCTATTATCTGCGCCATCCGATCTTTCGCGACCGAACGCCGTCGCCGGCTTTGAACTTTCTGCGGAGGCTTCCTTCACTGTCGGATCAACTCTTGTAG

Protein Analysis

1045

Amino Acids

116.49

Weight (kDa)

6.71

Isoelectric Point (pI)

49.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 6 - 108 4.3e-19 C2 domain
C2 PF00168 317 - 424 4.3e-08 C2 domain
C2 PF00168 474 - 580 1.5e-07 C2 domain
C2 PF00168 630 - 743 1.2e-17 C2 domain
PRT_C PF08372 889 - 1045 1.1e-67 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17980
fragaria_vesca FvH4_5g32500
malus_domestica MD14G1004500.v1.1
prunus_persica Prupe.7G007300_v2.0.a1
pyrus_communis pycom14g00300
rosa_chinensis RchiOBHm_Chr7g0229081
rosa_laevigata RLG00000001532
rosa_multiflora Rmu_co8189216.1_g000001 Rmu_sc0000271.1_g000019
rosa_roxburghii Rroxscaffold_3G00230740
rosa_rugosa Rorug07G0255500
rosa_samantha Rh7AG406700 Rh7BG386100 Rh7CG424400 Rh7DG401000
rosa_wichuraiana Rw7G033760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1148
AatII GACGTC 1 cut(s) 1040
Acc36I ACCTGC 1 cut(s) 502
Acc65I GGTACC 2 cut(s) 865, 978
AccB1I GGYRCC 4 cut(s) 865, 978, 1889, 2809
AccBSI CCGCTC 1 cut(s) 2402
AccI GTMKAC 3 cut(s) 96, 1704, 1767
AccIII TCCGGA 1 cut(s) 2529
AcoI YGGCCR 5 cut(s) 64, 277, 1093, 1590, 2418
AcuI CTGAAG 4 cut(s) 346, 519, 693, 843
AcvI CACGTG 7 cut(s) 1033, 1317, 1786, 1816, 1837, 2876, 2951
AcyI GRCGYC 3 cut(s) 195, 1037, 1472
AgeI ACCGGT 1 cut(s) 1930
AgsI TTSAA 9 cut(s) 175, 374, 767, 1528, 1694, 2059, 2254, 2738, 3094
AjiI CACGTC 4 cut(s) 736, 1210, 1700, 2937
AjnI CCWGG 2 cut(s) 1572, 3003
AjuI GAANNNNNNNTTGG 4 cut(s) 2433, 2465, 2744, 2776
Alw21I GWGCWC 3 cut(s) 225, 1443, 2625
Alw26I GTCTC 5 cut(s) 452, 1135, 2244, 2389, 2453
Alw44I GTGCAC 1 cut(s) 2621
AlwNI CAGNNNCTG 1 cut(s) 671
Ama87I CYCGRG 4 cut(s) 167, 1271, 1511, 2724
Aor13HI TCCGGA 1 cut(s) 2529
ApaLI GTGCAC 1 cut(s) 2621
ArsI GACNNNNNNTTYG 4 cut(s) 1067, 1099, 1568, 1600
AsiGI ACCGGT 1 cut(s) 1930
Asp700I GAANNNNTTC 1 cut(s) 269
Asp718I GGTACC 2 cut(s) 865, 978
AspLEI GCGC 7 cut(s) 574, 649, 1394, 1450, 1834, 2919, 3054
AsuC2I CCSGG 4 cut(s) 262, 545, 976, 1177
AsuHPI GGTGA 9 cut(s) 88, 142, 1310, 1597, 1675, 2276, 2419, 2566, 2944
AsuII TTCGAA 2 cut(s) 2118, 2158
AvaI CYCGRG 4 cut(s) 167, 1271, 1511, 2724
AvaII GGWCC 9 cut(s) 139, 833, 1075, 1141, 1231, 1284, 2010, 2317, 2728
BaeGI GKGCMC 3 cut(s) 1182, 2625, 2875
BamHI GGATCC 1 cut(s) 1744
BanI GGYRCC 4 cut(s) 865, 978, 1889, 2809
BanII GRGCYC 2 cut(s) 225, 2034
BarI GAAGNNNNNNTAC 4 cut(s) 932, 964, 1751, 1783
BauI CACGAG 1 cut(s) 2292
BbrPI CACGTG 7 cut(s) 1033, 1317, 1786, 1816, 1837, 2876, 2951
BbsI GAAGAC 3 cut(s) 570, 1367, 2107
Bbv12I GWGCWC 3 cut(s) 225, 1443, 2625
BccI CCATC 8 cut(s) 766, 1127, 1546, 1813, 2551, 2599, 3013, 3063
BcgI CGANNNNNNTGC 6 cut(s) 599, 633, 781, 815, 985, 1019
BciT130I CCWGG 2 cut(s) 1574, 3005
BciVI GTATCC 1 cut(s) 1992
BclI TGATCA 2 cut(s) 132, 757
BcnI CCSGG 4 cut(s) 262, 545, 976, 1177
BcoDI GTCTC 5 cut(s) 452, 1135, 2244, 2389, 2453
BfaI CTAG 2 cut(s) 404, 2369
BfmI CTRYAG 1 cut(s) 2710
BfoI RGCGCY 1 cut(s) 575
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 1992
BglI GCCNNNNNGGC 1 cut(s) 751
BglII AGATCT 1 cut(s) 1011
Bme1390I CCNGG 6 cut(s) 262, 545, 976, 1177, 1574, 3005
Bme18I GGWCC 9 cut(s) 139, 833, 1075, 1141, 1231, 1284, 2010, 2317, 2728
BmeT110I CYCGRG 4 cut(s) 167, 1271, 1511, 2724
BmgBI CACGTC 4 cut(s) 736, 1210, 1700, 2937
BmrFI CCNGG 6 cut(s) 262, 545, 976, 1177, 1574, 3005
BmrI ACTGGG 1 cut(s) 2900
BmsI GCATC 5 cut(s) 933, 1296, 1299, 2340, 2470
BmuI ACTGGG 1 cut(s) 2900
BpiI GAAGAC 3 cut(s) 570, 1367, 2107
BpmI CTGGAG 3 cut(s) 239, 905, 1649
Bpu14I TTCGAA 2 cut(s) 2118, 2158
BpuMI CCSGG 4 cut(s) 262, 545, 976, 1177
Bsa29I ATCGAT 2 cut(s) 909, 2802
BsaHI GRCGYC 3 cut(s) 195, 1037, 1472
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 9 cut(s) 67, 274, 543, 1189, 1248, 1395, 1857, 2132, 2307
BsaWI WCCGGW 5 cut(s) 655, 1710, 1882, 1930, 2529
Bse118I RCCGGY 7 cut(s) 279, 517, 631, 640, 1163, 1930, 3085
Bse1I ACTGG 4 cut(s) 1099, 1405, 1519, 2895
Bse3DI GCAATG 2 cut(s) 1265, 3033
BseAI TCCGGA 1 cut(s) 2529
BseBI CCWGG 2 cut(s) 1574, 3005
BseCI ATCGAT 2 cut(s) 909, 2802
BseDI CCNNGG 9 cut(s) 67, 274, 543, 1189, 1248, 1395, 1857, 2132, 2307
BseGI GGATG 7 cut(s) 217, 1119, 1538, 1828, 1961, 2485, 3055
BseMI GCAATG 2 cut(s) 1265, 3033
BseMII CTCAG 5 cut(s) 314, 447, 543, 741, 2384
BseNI ACTGG 4 cut(s) 1099, 1405, 1519, 2895
BseRI GAGGAG 5 cut(s) 286, 335, 405, 414, 2810
BseSI GKGCMC 3 cut(s) 1182, 2625, 2875
BseX3I CGGCCG 2 cut(s) 277, 1093
BseYI CCCAGC 3 cut(s) 869, 1321, 1506
BsgI GTGCAG 3 cut(s) 1861, 2900, 2942
Bsh1285I CGRYCG 5 cut(s) 280, 913, 1096, 1711, 3073
BshNI GGYRCC 4 cut(s) 865, 978, 1889, 2809
BshTI ACCGGT 1 cut(s) 1930
BshVI ATCGAT 2 cut(s) 909, 2802
BsiEI CGRYCG 5 cut(s) 280, 913, 1096, 1711, 3073
BsiHKAI GWGCWC 3 cut(s) 225, 1443, 2625
BsiHKCI CYCGRG 4 cut(s) 167, 1271, 1511, 2724
BslFI GGGAC 9 cut(s) 1088, 1136, 1154, 1244, 1270, 1393, 1445, 1663, 2714
BsmAI GTCTC 5 cut(s) 452, 1135, 2244, 2389, 2453
BsmBI CGTCTC 1 cut(s) 2389
BsmFI GGGAC 9 cut(s) 1088, 1136, 1154, 1244, 1270, 1393, 1445, 1663, 2714
BsmI GAATGC 1 cut(s) 1785
Bso31I GGTCTC 1 cut(s) 452
BsoBI CYCGRG 4 cut(s) 167, 1271, 1511, 2724
Bsp119I TTCGAA 2 cut(s) 2118, 2158
Bsp1286I GDGCHC 6 cut(s) 225, 1182, 1443, 2034, 2625, 2875
Bsp13I TCCGGA 1 cut(s) 2529
Bsp1407I TGTACA 3 cut(s) 1958, 2075, 2208
Bsp68I TCGCGA 1 cut(s) 3069
BspCNI CTCAG 5 cut(s) 313, 448, 544, 740, 2385
BspDI ATCGAT 2 cut(s) 909, 2802
BspEI TCCGGA 1 cut(s) 2529
BspHI TCATGA 1 cut(s) 235
BspMI ACCTGC 1 cut(s) 502
BspQI GCTCTTC 1 cut(s) 347
BspT104I TTCGAA 2 cut(s) 2118, 2158
BspT107I GGYRCC 4 cut(s) 865, 978, 1889, 2809
BspTNI GGTCTC 1 cut(s) 452
BsrBI CCGCTC 1 cut(s) 2402
BsrDI GCAATG 2 cut(s) 1265, 3033
BsrFI RCCGGY 7 cut(s) 279, 517, 631, 640, 1163, 1930, 3085
BsrGI TGTACA 3 cut(s) 1958, 2075, 2208
BsrI ACTGG 4 cut(s) 1099, 1405, 1519, 2895
BssAI RCCGGY 7 cut(s) 279, 517, 631, 640, 1163, 1930, 3085
BssECI CCNNGG 9 cut(s) 67, 274, 543, 1189, 1248, 1395, 1857, 2132, 2307
BssNAI GTATAC 1 cut(s) 1768
BssNI GRCGYC 3 cut(s) 195, 1037, 1472
BssSI CACGAG 1 cut(s) 2292
BssT1I CCWWGG 4 cut(s) 1248, 1395, 2132, 2307
Bst1107I GTATAC 1 cut(s) 1768
Bst2BI CACGAG 1 cut(s) 2292
Bst2UI CCWGG 2 cut(s) 1574, 3005
Bst6I CTCTTC 4 cut(s) 347, 365, 959, 1754
BstACI GRCGYC 3 cut(s) 195, 1037, 1472
BstAUI TGTACA 3 cut(s) 1958, 2075, 2208
BstBI TTCGAA 2 cut(s) 2118, 2158
BstDEI CTNAG 6 cut(s) 300, 456, 552, 727, 1980, 2393
BstDSI CCRYGG 2 cut(s) 67, 1857
BstF5I GGATG 7 cut(s) 217, 1119, 1538, 1828, 1961, 2485, 3055
BstH2I RGCGCY 1 cut(s) 575
BstHHI GCGC 7 cut(s) 574, 649, 1394, 1450, 1834, 2919, 3054
BstMAI GTCTC 5 cut(s) 452, 1135, 2244, 2389, 2453
BstMCI CGRYCG 5 cut(s) 280, 913, 1096, 1711, 3073
BstNI CCWGG 2 cut(s) 1574, 3005
BstNSI RCATGY 2 cut(s) 2392, 2476
BstSCI CCNGG 6 cut(s) 260, 543, 974, 1175, 1572, 3003
BstSFI CTRYAG 1 cut(s) 2710
BstSLI GKGCMC 3 cut(s) 1182, 2625, 2875
BstSNI TACGTA 2 cut(s) 2003, 2180
BstV2I GAAGAC 3 cut(s) 570, 1367, 2107
BstX2I RGATCY 3 cut(s) 1011, 1218, 1744
BstXI CCANNNNNNTGG 3 cut(s) 1168, 1321, 2149
BstYI RGATCY 3 cut(s) 1011, 1218, 1744
BstZ17I GTATAC 1 cut(s) 1768
BstZI CGGCCG 2 cut(s) 277, 1093
Bsu15I ATCGAT 2 cut(s) 909, 2802
BsuI GTATCC 1 cut(s) 1992
BsuTUI ATCGAT 2 cut(s) 909, 2802
BtgI CCRYGG 2 cut(s) 67, 1857
BtgZI GCGATG 1 cut(s) 3005
BtrI CACGTC 4 cut(s) 736, 1210, 1700, 2937
BtsCI GGATG 7 cut(s) 217, 1119, 1538, 1828, 1961, 2485, 3055
BtsIMutI CAGTG 3 cut(s) 804, 2085, 3116
BtuMI TCGCGA 1 cut(s) 3069
BveI ACCTGC 1 cut(s) 502
CaiI CAGNNNCTG 1 cut(s) 671
CciI TCATGA 1 cut(s) 235
CfoI GCGC 7 cut(s) 574, 649, 1394, 1450, 1834, 2919, 3054
Cfr10I RCCGGY 7 cut(s) 279, 517, 631, 640, 1163, 1930, 3085
ClaI ATCGAT 2 cut(s) 909, 2802
CpoI CGGWCCG 1 cut(s) 2010
CsiI ACCWGGT 1 cut(s) 3003
CspAI ACCGGT 1 cut(s) 1930
CspCI CAANNNNNGTGG 2 cut(s) 187, 222
CspI CGGWCCG 1 cut(s) 2010
CviAII CATG 6 cut(s) 236, 755, 1168, 2389, 2473, 2503
DdeI CTNAG 6 cut(s) 300, 456, 552, 727, 1980, 2393
DrdI GACNNNNNNGTC 1 cut(s) 1148
DseDI GACNNNNNNGTC 1 cut(s) 1148
EaeI YGGCCR 5 cut(s) 64, 277, 1093, 1590, 2418
EagI CGGCCG 2 cut(s) 277, 1093
Eam1104I CTCTTC 4 cut(s) 347, 365, 959, 1754
EarI CTCTTC 4 cut(s) 347, 365, 959, 1754
EciI GGCGGA 7 cut(s) 42, 417, 462, 681, 702, 1209, 1229
Ecl136II GAGCTC 1 cut(s) 223
EclXI CGGCCG 2 cut(s) 277, 1093
Eco105I TACGTA 2 cut(s) 2003, 2180
Eco130I CCWWGG 4 cut(s) 1248, 1395, 2132, 2307
Eco147I AGGCCT 1 cut(s) 188
Eco24I GRGCYC 2 cut(s) 225, 2034
Eco31I GGTCTC 1 cut(s) 452
Eco32I GATATC 1 cut(s) 1811
Eco47I GGWCC 9 cut(s) 139, 833, 1075, 1141, 1231, 1284, 2010, 2317, 2728
Eco52I CGGCCG 2 cut(s) 277, 1093
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 4 cut(s) 346, 519, 693, 843
Eco72I CACGTG 7 cut(s) 1033, 1317, 1786, 1816, 1837, 2876, 2951
Eco88I CYCGRG 4 cut(s) 167, 1271, 1511, 2724
EcoICRI GAGCTC 1 cut(s) 223
EcoO109I RGGNCCY 5 cut(s) 139, 1141, 1231, 1284, 2728
EcoRII CCWGG 2 cut(s) 1572, 3003
EcoRV GATATC 1 cut(s) 1811
EcoT14I CCWWGG 4 cut(s) 1248, 1395, 2132, 2307
EcoT38I GRGCYC 2 cut(s) 225, 2034
ErhI CCWWGG 4 cut(s) 1248, 1395, 2132, 2307
Esp3I CGTCTC 1 cut(s) 2389
FaeI CATG 6 cut(s) 239, 758, 1171, 2392, 2476, 2506
FalI AAGNNNNNCTT 2 cut(s) 344, 376
FaqI GGGAC 9 cut(s) 1088, 1136, 1154, 1244, 1270, 1393, 1445, 1663, 2714
FatI CATG 6 cut(s) 235, 754, 1167, 2388, 2472, 2502
FauNDI CATATG 1 cut(s) 2827
FbaI TGATCA 2 cut(s) 132, 757
FblI GTMKAC 3 cut(s) 96, 1704, 1767
FokI GGATG 7 cut(s) 224, 1106, 1525, 1835, 1968, 2492, 3042
FriOI GRGCYC 2 cut(s) 225, 2034
FspBI CTAG 2 cut(s) 404, 2369
GlaI GCGC 7 cut(s) 573, 648, 1393, 1449, 1833, 2918, 3053
GsaI CCCAGC 3 cut(s) 873, 1325, 1510
GsuI CTGGAG 3 cut(s) 239, 905, 1649
HaeII RGCGCY 1 cut(s) 575
HhaI GCGC 7 cut(s) 574, 649, 1394, 1450, 1834, 2919, 3054
Hin1I GRCGYC 3 cut(s) 195, 1037, 1472
Hin1II CATG 6 cut(s) 239, 758, 1171, 2392, 2476, 2506
Hin6I GCGC 7 cut(s) 572, 647, 1392, 1448, 1832, 2917, 3052
HinP1I GCGC 7 cut(s) 572, 647, 1392, 1448, 1832, 2917, 3052
HincII GTYRAC 4 cut(s) 37, 1041, 1705, 2776
HindII GTYRAC 4 cut(s) 37, 1041, 1705, 2776
HphI GGTGA 9 cut(s) 88, 142, 1310, 1597, 1675, 2276, 2419, 2566, 2944
HpyAV CCTTC 6 cut(s) 59, 517, 867, 1093, 2161, 3123
HpyF3I CTNAG 6 cut(s) 300, 456, 552, 727, 1980, 2393
Hsp92I GRCGYC 3 cut(s) 195, 1037, 1472
Hsp92II CATG 6 cut(s) 239, 758, 1171, 2392, 2476, 2506
HspAI GCGC 7 cut(s) 572, 647, 1392, 1448, 1832, 2917, 3052
KflI GGGWCCC 4 cut(s) 1141, 1231, 1284, 2728
Kpn2I TCCGGA 1 cut(s) 2529
KpnI GGTACC 2 cut(s) 869, 982
KroI GCCGGC 2 cut(s) 279, 3085
KroNI GCCGGC 2 cut(s) 281, 3087
Ksp22I TGATCA 2 cut(s) 132, 757
LguI GCTCTTC 1 cut(s) 347
LmnI GCTCC 5 cut(s) 220, 288, 886, 2029, 2699
LweI GCATC 5 cut(s) 933, 1296, 1299, 2340, 2470
MabI ACCWGGT 1 cut(s) 3003
MaeI CTAG 2 cut(s) 404, 2369
MaeIII GTNAC 5 cut(s) 580, 1033, 1654, 2430, 2932
MbiI CCGCTC 1 cut(s) 2402
MflI RGATCY 3 cut(s) 1011, 1218, 1744
MhlI GDGCHC 6 cut(s) 225, 1182, 1443, 2034, 2625, 2875
MluCI AATT 3 cut(s) 811, 2160, 2521
MluI ACGCGT 5 cut(s) 1353, 1965, 2144, 2322, 2585
MlyI GAGTC 6 cut(s) 88, 1103, 1263, 1349, 2121, 2308
MmeI TCCRAC 9 cut(s) 216, 582, 658, 941, 1047, 2327, 2457, 2950, 3102
MroI TCCGGA 1 cut(s) 2529
MroNI GCCGGC 2 cut(s) 279, 3085
MroXI GAANNNNTTC 1 cut(s) 269
MseI TTAA 2 cut(s) 1383, 1478
MslI CAYNNNNRTG 1 cut(s) 1166
MspA1I CMGCKG 6 cut(s) 668, 883, 1225, 1373, 1773, 1870
MspR9I CCNGG 6 cut(s) 262, 545, 976, 1177, 1574, 3005
Mva1269I GAATGC 1 cut(s) 1785
MvaI CCWGG 2 cut(s) 1574, 3005
NaeI GCCGGC 2 cut(s) 281, 3087
NciI CCSGG 4 cut(s) 262, 545, 976, 1177
NdeI CATATG 1 cut(s) 2827
NgoMIV GCCGGC 2 cut(s) 279, 3085
NlaIII CATG 6 cut(s) 239, 758, 1171, 2392, 2476, 2506
NmeAIII GCCGAG 4 cut(s) 255, 829, 1170, 1621
NmuCI GTSAC 4 cut(s) 1033, 1654, 2430, 2932
NruI TCGCGA 1 cut(s) 3069
NspI RCATGY 2 cut(s) 2392, 2476
NspV TTCGAA 2 cut(s) 2118, 2158
PaeR7I CTCGAG 2 cut(s) 167, 1271
PagI TCATGA 1 cut(s) 235
PceI AGGCCT 1 cut(s) 188
PciI ACATGT 1 cut(s) 2472
PciSI GCTCTTC 1 cut(s) 347
PctI GAATGC 1 cut(s) 1785
PdiI GCCGGC 2 cut(s) 281, 3087
PdmI GAANNNNTTC 1 cut(s) 269
PfeI GAWTC 5 cut(s) 548, 683, 825, 2486, 2599
PflFI GACNNNGTC 1 cut(s) 1457
PinAI ACCGGT 1 cut(s) 1930
Ple19I CGATCG 1 cut(s) 913
PleI GAGTC 6 cut(s) 87, 1103, 1263, 1348, 2120, 2307
PmaCI CACGTG 7 cut(s) 1033, 1317, 1786, 1816, 1837, 2876, 2951
PmlI CACGTG 7 cut(s) 1033, 1317, 1786, 1816, 1837, 2876, 2951
PpsI GAGTC 6 cut(s) 87, 1103, 1263, 1348, 2120, 2307
PpuMI RGGWCCY 5 cut(s) 139, 1141, 1231, 1284, 2728
PscI ACATGT 1 cut(s) 2472
Psp124BI GAGCTC 1 cut(s) 225
Psp5II RGGWCCY 5 cut(s) 139, 1141, 1231, 1284, 2728
Psp6I CCWGG 2 cut(s) 1572, 3003
PspCI CACGTG 7 cut(s) 1033, 1317, 1786, 1816, 1837, 2876, 2951
PspFI CCCAGC 3 cut(s) 869, 1321, 1506
PspGI CCWGG 2 cut(s) 1572, 3003
PspPPI RGGWCCY 5 cut(s) 139, 1141, 1231, 1284, 2728
PspXI VCTCGAGB 2 cut(s) 167, 1271
PsrI GAACNNNNNNTAC 2 cut(s) 2033, 2065
PstNI CAGNNNCTG 1 cut(s) 671
PsuI RGATCY 3 cut(s) 1011, 1218, 1744
PsyI GACNNNGTC 1 cut(s) 1457
PvuI CGATCG 1 cut(s) 913
PvuII CAGCTG 4 cut(s) 668, 883, 1373, 1870
RruI TCGCGA 1 cut(s) 3069
RseI CAYNNNNRTG 1 cut(s) 1166
Rsr2I CGGWCCG 1 cut(s) 2010
RsrII CGGWCCG 1 cut(s) 2010
SacI GAGCTC 1 cut(s) 225
SalI GTCGAC 1 cut(s) 1703
SapI GCTCTTC 1 cut(s) 347
SaqAI TTAA 2 cut(s) 1383, 1478
SchI GAGTC 6 cut(s) 88, 1103, 1263, 1349, 2121, 2308
ScrFI CCNGG 6 cut(s) 262, 545, 976, 1177, 1574, 3005
SduI GDGCHC 6 cut(s) 225, 1182, 1443, 2034, 2625, 2875
SexAI ACCWGGT 1 cut(s) 3003
SfaNI GCATC 5 cut(s) 933, 1296, 1299, 2340, 2470
SfcI CTRYAG 1 cut(s) 2710
Sfr274I CTCGAG 2 cut(s) 167, 1271
SfuI TTCGAA 2 cut(s) 2118, 2158
SgrAI CRCCGGYG 1 cut(s) 517
SinI GGWCC 9 cut(s) 139, 833, 1075, 1141, 1231, 1284, 2010, 2317, 2728
SlaI CTCGAG 2 cut(s) 167, 1271
SmiMI CAYNNNNRTG 1 cut(s) 1166
SmlI CTYRAG 2 cut(s) 167, 1271
SmoI CTYRAG 2 cut(s) 167, 1271
SnaBI TACGTA 2 cut(s) 2003, 2180
Sse9I AATT 3 cut(s) 811, 2160, 2521
SseBI AGGCCT 1 cut(s) 188
SspMI CTAG 2 cut(s) 404, 2369
SstI GAGCTC 1 cut(s) 225
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 6 cut(s) 260, 543, 974, 1175, 1572, 3003
StyI CCWWGG 4 cut(s) 1248, 1395, 2132, 2307
TaqII GACCGA 2 cut(s) 1379, 3087
TasI AATT 3 cut(s) 811, 2160, 2521
TatI WGTACW 4 cut(s) 1958, 2049, 2075, 2208
TfiI GAWTC 5 cut(s) 548, 683, 825, 2486, 2599
Tru1I TTAA 2 cut(s) 1383, 1478
Tru9I TTAA 2 cut(s) 1383, 1478
TscAI CASTG 3 cut(s) 804, 2085, 3123
TseFI GTSAC 4 cut(s) 1033, 1654, 2430, 2932
Tsp45I GTSAC 4 cut(s) 1033, 1654, 2430, 2932
TspDTI ATGAA 3 cut(s) 639, 1839, 2799
TspGWI ACGGA 7 cut(s) 1123, 1547, 2124, 2214, 2708, 2875, 3000
TspRI CASTG 3 cut(s) 804, 2085, 3123
Tth111I GACNNNGTC 1 cut(s) 1457
VneI GTGCAC 1 cut(s) 2621
VpaK11BI GGWCC 9 cut(s) 139, 833, 1075, 1141, 1231, 1284, 2010, 2317, 2728
XceI RCATGY 2 cut(s) 2392, 2476
XhoI CTCGAG 2 cut(s) 167, 1271
XmiI GTMKAC 3 cut(s) 96, 1704, 1767
XmnI GAANNNNTTC 1 cut(s) 269
XspI CTAG 2 cut(s) 404, 2369
ZraI GACGTC 1 cut(s) 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.