Rmu_sc0000271.1_g000019

Plant phosphoribosyltransferase C-terminal

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000271.1
Physical Location & Seq
Reverse (-)
95998 .. 99141
3144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000271.1_g000019.1.cds

Sequence Viewer

Length: 3144 bp
atggctactgttcggaagcttatagttgaggtggttgacgcacgcgaccttccgccaaaagacggccacggcacggtgagtccatacgttgtggtagactactatggccagcgaagacgggcacaaactgtgatcaaggacctgaaccctaaatggaacgagctgctcgagttcaacgtcggcaaggcctccgaagccaccgtgttcggggatgtgctggagctcgacgtctatcatgataaaaaccacggccccaccacccggaacaacttcctcggccggctccggctgacttcctctcagtttgtaaagaaaggcgaggaggctcttatatattttcctttgcagaagaagagcctcttcagttttattcaaggcgacattggcctaaagatttattacctagatgagcctcctcaacctcctccgccgccgccggaggaacccaagcctgctaagaccacgccgcctccaccgccggaggaaactaaacctgctggagctaccccgcctccaccgcctgaggaggccgcaccaccacccccggaatctgagaagaaagaagacgcagcgccaccggtaaccgagcaacagccgccatcggaaagtgagaagcctgctgaagaaccacctgctgacgcggcggcgcaaccaccggaaaccgcagctgctgaagttggagtatccgatcctccaccgccaccgccacctccacctcggccaccagaaatctcaggcgatgtaccagtgccagatcagcatgatcatattgaaatgatggcagcttcttctgtatcgaaatcagtaccggaaatcaagttcgtcggaggaatgaacggtccacagccaatggctcggcggccttcaggagttcccagctacacacagctggagccaactgaaagtatgtcaatcgatcgtccgacgtcgtttgatctggtggagaagatgcactacctcttcgttcgagtggtcaaggcccggtacctccccgccaacggcagacccgtcgtaaagatctccgcttccaactaccacgtgacgtcaactccggccagaaaaaccaactgcttcgagtgggaccagaccttcgctttcggccgccagtcgccggactccgcttccatccttgaagtctccgtgtgggacccgcccgtccccgaccccaccggcatggcctccgggcacaacttcctcggcggagtttgtttcgacgtggcggagatcccgctgcgtgacccgccggacagtcccttggccccgcaatggtacagactcgagggtggcgggtcccgcatcaacggtgatctgatgctcgccacgtggatgggaacccaagcagacgagtcgtttcccgacgcgtggaagaccgatactgccggaaaccctaatgcacgcgccaaggtgtaccagtctccgaagctctggtatctccgagcaacggtgctcgaagcgcaagacgttgtccccataacgtcgtcgttaaaggaagccacattccaagtcaaagcccagctcgggttccagtctttcaagaccgaaccatccctcactcgaaacggcacgccttcttggaaccaggatttgatattcgtggccgccgagccgttcaccgatcacttggttttcgtgctggagaaccggcaaccgaaaggaacggtcacattgggctttgcgaagataccactcaccgccattgaacggcgtgtcgacgaccggaaagttgcgtcgaaatggatcagcttggaggatccaaaagacgagaagagggtgtacagcggaagaatgcacgtgcggatttgcttcgacgggggatatcacgtgatggatgaagcggcgcacgtgtgcagcgactaccgccccacggcgaggcaactgtggaagcctccggttggcaccgtcgagcttggtattattgggtgcaagaacttgataccggtcaagacggtaaacggtaaaggatgtacggacgcgtattgtgttgctaagtatgggtcaaagtgggtacgtacgcggaccgtatgcgatagcttggagcccaagtggaacgagcagtacactttcagggtgtttgatccttgtacagtgttgagtattggtgtttttgatagcaatggagtcttcgaaactgacggcccgagggaagccacgcgtccggactttcgaattgggaaggtacgtgtacgtatatcgactttgactacgggtaaagtgtacaagcatacgtatccgttgttggtcttgtctccggccggattgaagaaaatgggtgaggtggagattgccatacgctttgctcgtgtgagtccaaccttggatttggtccacgcgtactcgcagcctctattgccgttgatgcaccacataaagccactaggagtggggcaacaagacatgctgagacgagcggcggttaagatcgtggccgcacacttatcacgatcggaaccaccgctcgtccgtgagactgttctctacatgttggatgcggattcacacgggtttagcatgaggaaagttcgggccaattatttccggatcatcaatgtcgtagcgggggtgatggacattgttgggtggataaacgacacgcgttcctggaagaatccgatggctactattctggtgcacgcattgttggtgctgcttgtgtggtttcctgatttgataatcccaactttgttgttctacgtgttcgcaatcggagcttggaactataggttccgttctcgagtcccacttcaacactttgatccaaaactctcattggctgatacagttgaccgtgatgaacttgacgaggagatcgatacggtgccaagcaccagatcatatgaggtagtacgggcaaggtacgacaagctacggacgcttggggcacgtgtgcagacggtactgggggattttgccacgcaaggagagcgcgtgcaggcgttggtgacgtggcgtgatccacgtgcgacggggatttttgttggactgtgctttgtggtagcgatgatattgtacttggttccgtcgaagatggtggcaatggccttcgggttctattatctgcgccatccgatctttcgcgaccgaacgccgtcgccggctttgaactttctgcggaggcttccttcactgtcggatcaactcttgtag

Protein Analysis

1047

Amino Acids

116.64

Weight (kDa)

7.31

Isoelectric Point (pI)

50.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17980
fragaria_vesca FvH4_5g32500
malus_domestica MD14G1004500.v1.1
prunus_persica Prupe.7G007300_v2.0.a1
pyrus_communis pycom14g00300
rosa_chinensis RchiOBHm_Chr7g0229081
rosa_laevigata RLG00000001532
rosa_multiflora Rmu_co8189216.1_g000001 Rmu_sc0000271.1_g000019
rosa_roxburghii Rroxscaffold_3G00230740
rosa_rugosa Rorug07G0255500
rosa_samantha Rh7AG406700 Rh7BG386100 Rh7CG424400 Rh7DG401000
rosa_wichuraiana Rw7G033760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 640
AasI GACNNNNNNGTC 1 cut(s) 1154
AatII GACGTC 3 cut(s) 231, 929, 1046
Acc36I ACCTGC 2 cut(s) 502, 640
Acc65I GGTACC 1 cut(s) 984
AccB1I GGYRCC 3 cut(s) 984, 1895, 2815
AccBSI CCGCTC 2 cut(s) 2408, 2455
AccI GTMKAC 2 cut(s) 96, 1710
AccIII TCCGGA 2 cut(s) 2155, 2535
AcoI YGGCCR 9 cut(s) 64, 106, 277, 719, 1053, 1099, 1596, 2250, 2424
AcuI CTGAAG 4 cut(s) 346, 642, 693, 849
AcvI CACGTG 7 cut(s) 1039, 1323, 1792, 1822, 1843, 2882, 2957
AcyI GRCGYC 3 cut(s) 228, 926, 1043
AgeI ACCGGT 2 cut(s) 577, 1936
AgsI TTSAA 9 cut(s) 175, 374, 773, 1133, 1534, 1700, 2260, 2744, 3100
AjiI CACGTC 2 cut(s) 1216, 2943
AjnI CCWGG 2 cut(s) 1578, 2597
AloI GAACNNNNNNTCC 2 cut(s) 803, 835
Alw21I GWGCWC 3 cut(s) 225, 1449, 2631
Alw26I GTCTC 5 cut(s) 1141, 1419, 2250, 2395, 2459
Alw44I GTGCAC 1 cut(s) 2627
AlwNI CAGNNNCTG 1 cut(s) 671
Ama87I CYCGRG 5 cut(s) 167, 1277, 1517, 2137, 2730
Aor13HI TCCGGA 2 cut(s) 2155, 2535
ApaLI GTGCAC 1 cut(s) 2627
ApeKI GCWGC 9 cut(s) 163, 569, 665, 668, 782, 1231, 1848, 2338, 2644
ArsI GACNNNNNNTTYG 2 cut(s) 1073, 1105
AsiGI ACCGGT 2 cut(s) 577, 1936
Asp700I GAANNNNTTC 1 cut(s) 269
Asp718I GGTACC 1 cut(s) 984
AspLEI GCGC 7 cut(s) 574, 649, 1400, 1456, 1840, 2925, 3060
AsuC2I CCSGG 4 cut(s) 262, 545, 982, 1183
AsuHPI GGTGA 7 cut(s) 88, 1316, 1603, 1681, 2282, 2572, 2950
AsuII TTCGAA 2 cut(s) 2124, 2164
AvaI CYCGRG 5 cut(s) 167, 1277, 1517, 2137, 2730
AvaII GGWCC 7 cut(s) 139, 839, 1081, 1147, 1290, 2016, 2323
AxyI CCTNAGG 1 cut(s) 522
BaeGI GKGCMC 4 cut(s) 124, 1188, 2631, 2881
BalI TGGCCA 1 cut(s) 108
BamHI GGATCC 1 cut(s) 1750
BanI GGYRCC 3 cut(s) 984, 1895, 2815
BanII GRGCYC 2 cut(s) 225, 2040
BarI GAAGNNNNNNTAC 4 cut(s) 938, 970, 1757, 1789
BauI CACGAG 1 cut(s) 2298
BbrPI CACGTG 7 cut(s) 1039, 1323, 1792, 1822, 1843, 2882, 2957
BbsI GAAGAC 4 cut(s) 121, 570, 1373, 2113
Bbv12I GWGCWC 3 cut(s) 225, 1449, 2631
BbvI GCAGC 9 cut(s) 150, 581, 655, 677, 794, 1218, 1860, 2350, 2631
BcgI CGANNNNNNTGC 4 cut(s) 991, 1025, 1329, 1363
BciT130I CCWGG 2 cut(s) 1580, 2599
BciVI GTATCC 2 cut(s) 694, 2238
BclI TGATCA 2 cut(s) 132, 763
BcnI CCSGG 4 cut(s) 262, 545, 982, 1183
BcoDI GTCTC 5 cut(s) 1141, 1419, 2250, 2395, 2459
BfaI CTAG 2 cut(s) 404, 2375
BfmI CTRYAG 1 cut(s) 2716
BfoI RGCGCY 1 cut(s) 575
BfuAI ACCTGC 2 cut(s) 502, 640
BfuI GTATCC 2 cut(s) 694, 2238
BglII AGATCT 1 cut(s) 1017
Bme1390I CCNGG 6 cut(s) 262, 545, 982, 1183, 1580, 2599
Bme18I GGWCC 7 cut(s) 139, 839, 1081, 1147, 1290, 2016, 2323
BmeT110I CYCGRG 5 cut(s) 167, 1277, 1517, 2137, 2730
BmgBI CACGTC 2 cut(s) 1216, 2943
BmrFI CCNGG 6 cut(s) 262, 545, 982, 1183, 1580, 2599
BmrI ACTGGG 1 cut(s) 2906
BmsI GCATC 5 cut(s) 939, 1302, 1305, 2346, 2476
BmuI ACTGGG 1 cut(s) 2906
BpiI GAAGAC 4 cut(s) 121, 570, 1373, 2113
BpmI CTGGAG 4 cut(s) 239, 519, 911, 1655
Bpu14I TTCGAA 2 cut(s) 2124, 2164
BpuMI CCSGG 4 cut(s) 262, 545, 982, 1183
Bsa29I ATCGAT 2 cut(s) 915, 2808
BsaHI GRCGYC 3 cut(s) 228, 926, 1043
BsaWI WCCGGW 8 cut(s) 577, 655, 808, 1716, 1888, 1936, 2155, 2535
Bse118I RCCGGY 6 cut(s) 279, 577, 1169, 1641, 1936, 3091
Bse1I ACTGG 5 cut(s) 746, 1105, 1411, 1525, 2901
Bse21I CCTNAGG 1 cut(s) 522
Bse3DI GCAATG 3 cut(s) 1271, 2119, 3039
BseAI TCCGGA 2 cut(s) 2155, 2535
BseBI CCWGG 2 cut(s) 1580, 2599
BseCI ATCGAT 2 cut(s) 915, 2808
BseGI GGATG 8 cut(s) 217, 1125, 1332, 1544, 1834, 1967, 2491, 3061
BseMI GCAATG 3 cut(s) 1271, 2119, 3039
BseMII CTCAG 5 cut(s) 314, 513, 543, 747, 2390
BseNI ACTGG 5 cut(s) 746, 1105, 1411, 1525, 2901
BseRI GAGGAG 5 cut(s) 335, 405, 414, 539, 2816
BseSI GKGCMC 4 cut(s) 124, 1188, 2631, 2881
BseX3I CGGCCG 3 cut(s) 277, 1099, 2250
BseXI GCAGC 9 cut(s) 150, 581, 655, 677, 794, 1218, 1860, 2350, 2631
BseYI CCCAGC 2 cut(s) 875, 1512
BsgI GTGCAG 3 cut(s) 1867, 2906, 2948
Bsh1285I CGRYCG 7 cut(s) 280, 919, 1102, 1717, 2253, 2444, 3079
BshNI GGYRCC 3 cut(s) 984, 1895, 2815
BshTI ACCGGT 2 cut(s) 577, 1936
BshVI ATCGAT 2 cut(s) 915, 2808
BsiEI CGRYCG 7 cut(s) 280, 919, 1102, 1717, 2253, 2444, 3079
BsiHKAI GWGCWC 3 cut(s) 225, 1449, 2631
BsiHKCI CYCGRG 5 cut(s) 167, 1277, 1517, 2137, 2730
BsiWI CGTACG 1 cut(s) 2009
BslFI GGGAC 7 cut(s) 1094, 1142, 1160, 1236, 1276, 1451, 2720
BsmAI GTCTC 5 cut(s) 1141, 1419, 2250, 2395, 2459
BsmBI CGTCTC 1 cut(s) 2395
BsmFI GGGAC 7 cut(s) 1094, 1142, 1160, 1236, 1276, 1451, 2720
BsmI GAATGC 1 cut(s) 1791
BsoBI CYCGRG 5 cut(s) 167, 1277, 1517, 2137, 2730
Bsp119I TTCGAA 2 cut(s) 2124, 2164
Bsp1286I GDGCHC 7 cut(s) 124, 225, 1188, 1449, 2040, 2631, 2881
Bsp13I TCCGGA 2 cut(s) 2155, 2535
Bsp1407I TGTACA 3 cut(s) 1773, 2081, 2214
Bsp68I TCGCGA 1 cut(s) 3075
BspCNI CTCAG 5 cut(s) 313, 514, 544, 746, 2391
BspDI ATCGAT 2 cut(s) 915, 2808
BspEI TCCGGA 2 cut(s) 2155, 2535
BspHI TCATGA 1 cut(s) 235
BspMI ACCTGC 2 cut(s) 502, 640
BspQI GCTCTTC 1 cut(s) 347
BspT104I TTCGAA 2 cut(s) 2124, 2164
BspT107I GGYRCC 3 cut(s) 984, 1895, 2815
BsrBI CCGCTC 2 cut(s) 2408, 2455
BsrDI GCAATG 3 cut(s) 1271, 2119, 3039
BsrFI RCCGGY 6 cut(s) 279, 577, 1169, 1641, 1936, 3091
BsrGI TGTACA 3 cut(s) 1773, 2081, 2214
BsrI ACTGG 5 cut(s) 746, 1105, 1411, 1525, 2901
BssAI RCCGGY 6 cut(s) 279, 577, 1169, 1641, 1936, 3091
BssNI GRCGYC 3 cut(s) 228, 926, 1043
BssSI CACGAG 1 cut(s) 2298
BssT1I CCWWGG 3 cut(s) 1254, 1401, 2313
Bst2BI CACGAG 1 cut(s) 2298
Bst2UI CCWGG 2 cut(s) 1580, 2599
Bst6I CTCTTC 4 cut(s) 347, 365, 965, 1760
BstACI GRCGYC 3 cut(s) 228, 926, 1043
BstAUI TGTACA 3 cut(s) 1773, 2081, 2214
BstBI TTCGAA 2 cut(s) 2124, 2164
BstDEI CTNAG 7 cut(s) 300, 456, 522, 552, 733, 1986, 2399
BstDSI CCRYGG 3 cut(s) 67, 247, 1863
BstEII GGTNACC 1 cut(s) 580
BstF5I GGATG 8 cut(s) 217, 1125, 1332, 1544, 1834, 1967, 2491, 3061
BstH2I RGCGCY 1 cut(s) 575
BstHHI GCGC 7 cut(s) 574, 649, 1400, 1456, 1840, 2925, 3060
BstMAI GTCTC 5 cut(s) 1141, 1419, 2250, 2395, 2459
BstMCI CGRYCG 7 cut(s) 280, 919, 1102, 1717, 2253, 2444, 3079
BstNI CCWGG 2 cut(s) 1580, 2599
BstNSI RCATGY 2 cut(s) 2398, 2482
BstPI GGTNACC 1 cut(s) 580
BstSCI CCNGG 6 cut(s) 260, 543, 980, 1181, 1578, 2597
BstSFI CTRYAG 1 cut(s) 2716
BstSLI GKGCMC 4 cut(s) 124, 1188, 2631, 2881
BstSNI TACGTA 3 cut(s) 2009, 2186, 2226
BstV1I GCAGC 9 cut(s) 150, 581, 655, 677, 794, 1218, 1860, 2350, 2631
BstV2I GAAGAC 4 cut(s) 121, 570, 1373, 2113
BstX2I RGATCY 3 cut(s) 1017, 1224, 1750
BstXI CCANNNNNNTGG 2 cut(s) 1174, 1327
BstYI RGATCY 3 cut(s) 1017, 1224, 1750
BstZI CGGCCG 3 cut(s) 277, 1099, 2250
Bsu15I ATCGAT 2 cut(s) 915, 2808
Bsu36I CCTNAGG 1 cut(s) 522
BsuI GTATCC 2 cut(s) 694, 2238
BsuTUI ATCGAT 2 cut(s) 915, 2808
BtgI CCRYGG 3 cut(s) 67, 247, 1863
BtgZI GCGATG 2 cut(s) 753, 3011
BtrI CACGTC 2 cut(s) 1216, 2943
BtsCI GGATG 8 cut(s) 217, 1125, 1332, 1544, 1834, 1967, 2491, 3061
BtsIMutI CAGTG 3 cut(s) 753, 2091, 3122
BtuMI TCGCGA 1 cut(s) 3075
BveI ACCTGC 2 cut(s) 502, 640
CaiI CAGNNNCTG 1 cut(s) 671
CciI TCATGA 1 cut(s) 235
CfoI GCGC 7 cut(s) 574, 649, 1400, 1456, 1840, 2925, 3060
Cfr10I RCCGGY 6 cut(s) 279, 577, 1169, 1641, 1936, 3091
ClaI ATCGAT 2 cut(s) 915, 2808
CpoI CGGWCCG 1 cut(s) 2016
CseI GACGC 8 cut(s) 47, 575, 647, 1367, 1716, 1979, 2141, 2878
CspAI ACCGGT 2 cut(s) 577, 1936
CspI CGGWCCG 1 cut(s) 2016
CviAII CATG 6 cut(s) 236, 761, 1174, 2395, 2479, 2509
DdeI CTNAG 7 cut(s) 300, 456, 522, 552, 733, 1986, 2399
DrdI GACNNNNNNGTC 1 cut(s) 1154
DseDI GACNNNNNNGTC 1 cut(s) 1154
EaeI YGGCCR 9 cut(s) 64, 106, 277, 719, 1053, 1099, 1596, 2250, 2424
EagI CGGCCG 3 cut(s) 277, 1099, 2250
Eam1104I CTCTTC 4 cut(s) 347, 365, 965, 1760
EarI CTCTTC 4 cut(s) 347, 365, 965, 1760
EciI GGCGGA 4 cut(s) 42, 417, 1215, 1235
Ecl136II GAGCTC 1 cut(s) 223
EclXI CGGCCG 3 cut(s) 277, 1099, 2250
Eco105I TACGTA 3 cut(s) 2009, 2186, 2226
Eco130I CCWWGG 3 cut(s) 1254, 1401, 2313
Eco147I AGGCCT 1 cut(s) 188
Eco24I GRGCYC 2 cut(s) 225, 2040
Eco32I GATATC 1 cut(s) 1817
Eco47I GGWCC 7 cut(s) 139, 839, 1081, 1147, 1290, 2016, 2323
Eco52I CGGCCG 3 cut(s) 277, 1099, 2250
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 4 cut(s) 346, 642, 693, 849
Eco72I CACGTG 7 cut(s) 1039, 1323, 1792, 1822, 1843, 2882, 2957
Eco81I CCTNAGG 1 cut(s) 522
Eco88I CYCGRG 5 cut(s) 167, 1277, 1517, 2137, 2730
Eco91I GGTNACC 1 cut(s) 580
EcoICRI GAGCTC 1 cut(s) 223
EcoO109I RGGNCCY 3 cut(s) 139, 1147, 1290
EcoO65I GGTNACC 1 cut(s) 580
EcoRII CCWGG 2 cut(s) 1578, 2597
EcoRV GATATC 1 cut(s) 1817
EcoT14I CCWWGG 3 cut(s) 1254, 1401, 2313
EcoT38I GRGCYC 2 cut(s) 225, 2040
ErhI CCWWGG 3 cut(s) 1254, 1401, 2313
Esp3I CGTCTC 1 cut(s) 2395
FaeI CATG 6 cut(s) 239, 764, 1177, 2398, 2482, 2512
FalI AAGNNNNNCTT 2 cut(s) 344, 376
FaqI GGGAC 7 cut(s) 1094, 1142, 1160, 1236, 1276, 1451, 2720
FatI CATG 6 cut(s) 235, 760, 1173, 2394, 2478, 2508
FauI CCCGC 9 cut(s) 516, 1000, 1158, 1236, 1248, 1269, 1280, 1301, 2548
FauNDI CATATG 1 cut(s) 2833
FbaI TGATCA 2 cut(s) 132, 763
FblI GTMKAC 2 cut(s) 96, 1710
FokI GGATG 8 cut(s) 224, 1112, 1339, 1531, 1841, 1974, 2498, 3048
FriOI GRGCYC 2 cut(s) 225, 2040
FspBI CTAG 2 cut(s) 404, 2375
GlaI GCGC 7 cut(s) 573, 648, 1399, 1455, 1839, 2924, 3059
GsaI CCCAGC 2 cut(s) 879, 1516
GsuI CTGGAG 4 cut(s) 239, 519, 911, 1655
HaeII RGCGCY 1 cut(s) 575
HgaI GACGC 8 cut(s) 47, 575, 647, 1367, 1716, 1979, 2141, 2878
HhaI GCGC 7 cut(s) 574, 649, 1400, 1456, 1840, 2925, 3060
Hin1I GRCGYC 3 cut(s) 228, 926, 1043
Hin1II CATG 6 cut(s) 239, 764, 1177, 2398, 2482, 2512
Hin6I GCGC 7 cut(s) 572, 647, 1398, 1454, 1838, 2923, 3058
HinP1I GCGC 7 cut(s) 572, 647, 1398, 1454, 1838, 2923, 3058
HincII GTYRAC 4 cut(s) 37, 1047, 1711, 2782
HindII GTYRAC 4 cut(s) 37, 1047, 1711, 2782
HindIII AAGCTT 1 cut(s) 17
HphI GGTGA 7 cut(s) 88, 1316, 1603, 1681, 2282, 2572, 2950
HpyAV CCTTC 7 cut(s) 59, 873, 1099, 1578, 2167, 3049, 3129
HpyF3I CTNAG 7 cut(s) 300, 456, 522, 552, 733, 1986, 2399
Hsp92I GRCGYC 3 cut(s) 228, 926, 1043
Hsp92II CATG 6 cut(s) 239, 764, 1177, 2398, 2482, 2512
HspAI GCGC 7 cut(s) 572, 647, 1398, 1454, 1838, 2923, 3058
KflI GGGWCCC 2 cut(s) 1147, 1290
Kpn2I TCCGGA 2 cut(s) 2155, 2535
KpnI GGTACC 1 cut(s) 988
KroI GCCGGC 2 cut(s) 279, 3091
KroNI GCCGGC 2 cut(s) 281, 3093
Ksp22I TGATCA 2 cut(s) 132, 763
LguI GCTCTTC 1 cut(s) 347
LmnI GCTCC 6 cut(s) 220, 288, 500, 892, 2035, 2705
Lsp1109I GCAGC 9 cut(s) 150, 581, 655, 677, 794, 1218, 1860, 2350, 2631
LweI GCATC 5 cut(s) 939, 1302, 1305, 2346, 2476
MaeI CTAG 2 cut(s) 404, 2375
MaeIII GTNAC 5 cut(s) 580, 1039, 1235, 1660, 2938
MbiI CCGCTC 2 cut(s) 2408, 2455
MflI RGATCY 3 cut(s) 1017, 1224, 1750
MhlI GDGCHC 7 cut(s) 124, 225, 1188, 1449, 2040, 2631, 2881
MlsI TGGCCA 1 cut(s) 108
MluCI AATT 2 cut(s) 2166, 2527
MluI ACGCGT 5 cut(s) 1359, 1971, 2150, 2328, 2591
MluNI TGGCCA 1 cut(s) 108
MlyI GAGTC 7 cut(s) 88, 1109, 1269, 1355, 2127, 2314, 2742
MmeI TCCRAC 8 cut(s) 658, 805, 947, 1053, 2333, 2463, 2956, 3108
Mox20I TGGCCA 1 cut(s) 108
MroI TCCGGA 2 cut(s) 2155, 2535
MroNI GCCGGC 2 cut(s) 279, 3091
MroXI GAANNNNTTC 1 cut(s) 269
MscI TGGCCA 1 cut(s) 108
MseI TTAA 2 cut(s) 1484, 2415
MslI CAYNNNNRTG 2 cut(s) 1172, 1325
Msp20I TGGCCA 1 cut(s) 108
MspA1I CMGCKG 4 cut(s) 668, 889, 1231, 1779
MspR9I CCNGG 6 cut(s) 262, 545, 982, 1183, 1580, 2599
Mva1269I GAATGC 1 cut(s) 1791
MvaI CCWGG 2 cut(s) 1580, 2599
NaeI GCCGGC 2 cut(s) 281, 3093
NciI CCSGG 4 cut(s) 262, 545, 982, 1183
NdeI CATATG 1 cut(s) 2833
NgoMIV GCCGGC 2 cut(s) 279, 3091
NlaIII CATG 6 cut(s) 239, 764, 1177, 2398, 2482, 2512
NmeAIII GCCGAG 5 cut(s) 255, 697, 835, 1176, 1627
NmuCI GTSAC 4 cut(s) 1039, 1235, 1660, 2938
NruI TCGCGA 1 cut(s) 3075
NspI RCATGY 2 cut(s) 2398, 2482
NspV TTCGAA 2 cut(s) 2124, 2164
PaeR7I CTCGAG 3 cut(s) 167, 1277, 2730
PagI TCATGA 1 cut(s) 235
PaqCI CACCTGC 1 cut(s) 640
PceI AGGCCT 1 cut(s) 188
PciI ACATGT 1 cut(s) 2478
PciSI GCTCTTC 1 cut(s) 347
PcsI WCGNNNNNNNCGW 7 cut(s) 165, 174, 1005, 1599, 1848, 2296, 2805
PctI GAATGC 1 cut(s) 1791
PdiI GCCGGC 2 cut(s) 281, 3093
PdmI GAANNNNTTC 1 cut(s) 269
PfeI GAWTC 3 cut(s) 548, 2492, 2605
Pfl23II CGTACG 1 cut(s) 2009
PflFI GACNNNGTC 1 cut(s) 1463
PfoI TCCNGGA 1 cut(s) 2597
PinAI ACCGGT 2 cut(s) 577, 1936
Ple19I CGATCG 2 cut(s) 919, 2444
PleI GAGTC 7 cut(s) 87, 1109, 1269, 1354, 2126, 2313, 2741
PmaCI CACGTG 7 cut(s) 1039, 1323, 1792, 1822, 1843, 2882, 2957
PmlI CACGTG 7 cut(s) 1039, 1323, 1792, 1822, 1843, 2882, 2957
PpsI GAGTC 7 cut(s) 87, 1109, 1269, 1354, 2126, 2313, 2741
PpuMI RGGWCCY 3 cut(s) 139, 1147, 1290
PscI ACATGT 1 cut(s) 2478
Psp124BI GAGCTC 1 cut(s) 225
Psp5II RGGWCCY 3 cut(s) 139, 1147, 1290
Psp6I CCWGG 2 cut(s) 1578, 2597
PspCI CACGTG 7 cut(s) 1039, 1323, 1792, 1822, 1843, 2882, 2957
PspEI GGTNACC 1 cut(s) 580
PspFI CCCAGC 2 cut(s) 875, 1512
PspGI CCWGG 2 cut(s) 1578, 2597
PspLI CGTACG 1 cut(s) 2009
PspPPI RGGWCCY 3 cut(s) 139, 1147, 1290
PspXI VCTCGAGB 2 cut(s) 167, 1277
PsrI GAACNNNNNNTAC 2 cut(s) 2039, 2071
PstNI CAGNNNCTG 1 cut(s) 671
PsuI RGATCY 3 cut(s) 1017, 1224, 1750
PsyI GACNNNGTC 1 cut(s) 1463
PvuI CGATCG 2 cut(s) 919, 2444
PvuII CAGCTG 2 cut(s) 668, 889
RruI TCGCGA 1 cut(s) 3075
RseI CAYNNNNRTG 2 cut(s) 1172, 1325
Rsr2I CGGWCCG 1 cut(s) 2016
RsrII CGGWCCG 1 cut(s) 2016
SacI GAGCTC 1 cut(s) 225
SalI GTCGAC 1 cut(s) 1709
SapI GCTCTTC 1 cut(s) 347
SaqAI TTAA 2 cut(s) 1484, 2415
SchI GAGTC 7 cut(s) 88, 1109, 1269, 1355, 2127, 2314, 2742
ScrFI CCNGG 6 cut(s) 262, 545, 982, 1183, 1580, 2599
SduI GDGCHC 7 cut(s) 124, 225, 1188, 1449, 2040, 2631, 2881
SfaNI GCATC 5 cut(s) 939, 1302, 1305, 2346, 2476
SfcI CTRYAG 1 cut(s) 2716
Sfr274I CTCGAG 3 cut(s) 167, 1277, 2730
SfuI TTCGAA 2 cut(s) 2124, 2164
SinI GGWCC 7 cut(s) 139, 839, 1081, 1147, 1290, 2016, 2323
SlaI CTCGAG 3 cut(s) 167, 1277, 2730
SmiMI CAYNNNNRTG 2 cut(s) 1172, 1325
SmlI CTYRAG 3 cut(s) 167, 1277, 2730
SmoI CTYRAG 3 cut(s) 167, 1277, 2730
SnaBI TACGTA 3 cut(s) 2009, 2186, 2226
Sse9I AATT 2 cut(s) 2166, 2527
SseBI AGGCCT 1 cut(s) 188
SspMI CTAG 2 cut(s) 404, 2375
SstI GAGCTC 1 cut(s) 225
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 6 cut(s) 260, 543, 980, 1181, 1578, 2597
StyI CCWWGG 3 cut(s) 1254, 1401, 2313
TaqII GACCGA 3 cut(s) 1385, 1553, 3093
TasI AATT 2 cut(s) 2166, 2527
TatI WGTACW 5 cut(s) 1773, 2055, 2081, 2214, 3006
TfiI GAWTC 3 cut(s) 548, 2492, 2605
Tru1I TTAA 2 cut(s) 1484, 2415
Tru9I TTAA 2 cut(s) 1484, 2415
TscAI CASTG 3 cut(s) 753, 2091, 3129
TseFI GTSAC 4 cut(s) 1039, 1235, 1660, 2938
TseI GCWGC 9 cut(s) 163, 569, 665, 668, 782, 1231, 1848, 2338, 2644
Tsp45I GTSAC 4 cut(s) 1039, 1235, 1660, 2938
TspDTI ATGAA 3 cut(s) 848, 1845, 2805
TspGWI ACGGA 7 cut(s) 1129, 1982, 2220, 2450, 2714, 2881, 3006
TspRI CASTG 3 cut(s) 753, 2091, 3129
Tth111I GACNNNGTC 1 cut(s) 1463
VneI GTGCAC 1 cut(s) 2627
VpaK11BI GGWCC 7 cut(s) 139, 839, 1081, 1147, 1290, 2016, 2323
XceI RCATGY 2 cut(s) 2398, 2482
XhoI CTCGAG 3 cut(s) 167, 1277, 2730
XmiI GTMKAC 2 cut(s) 96, 1710
XmnI GAANNNNTTC 1 cut(s) 269
XspI CTAG 2 cut(s) 404, 2375
ZraI GACGTC 3 cut(s) 229, 927, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.