Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0010054

Physical Location & Seq

Genomic Coordinates Reverse (-)

1233197 .. 1237578

Gene Structure 4382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1013800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGAAGCTGTGTCGCCAGACCAGGAATCAGTTGGGTCTGGGACAAGGAGGTCTAGTGCATCATCTGGCAGTAGGTCTCGTAACTGCAAGGAGTTTCTTCATAGATTTGTAGACAGTGGCATGCTTACTACACAATTAGAAGACTGGTTTGAATCTATATCCAACAAATCAGAACCAATGAAACCGGCCTTTGATGTGCCTTTTGAGTTGATAGAACTTCAAAAGTTTGACTATGCATTGGAAGGGATTTCATTTCAGCAGGTGATTAGGATGCCCAATTCCGTTTATGCTTCAACATCGGATGCTGTTGAAGCAACTGCTTATCTTGCCATTGAAGATTTTTTACATGCCGGTGCGAAGGGATTGTGGGAAGCATTCTGGAATCAAGATGAGCCTATGCCTTTCTCTGTTGCTTGTCTATACAATGAAAACTTGAAATTCTACCAGGCTGAGAAGGCAATTGGGGATGGTAAGCTTGGAGGTCTTTGTGCTACCGGTTTATTGCTTACAAACCCTAGACATCCCCGTGGGAAGTGGGATCATATTCTTGAACTGTCTCTTTTAAGGCCTGATATCAGAAACTTTTCCATGGATAGTGACAGGCAGCTTTCTCTATCTGTTTTAGGCGAGGCCCTTTTCTATGCTCTTCGTGTACTATTATCAAGAAGCTTGAGCAGAATGAACTACTCTCAGAGTTCAAACTCTGTGTTTATTCTTCTTGTTGATTCTCAGTATGGTGGGGTAGTAAAGGTTGAAGGAGATGTAAATAAGATGGTGTTTGATGTCAATAATGTTTACGAATGTGCAGCTGAATGGATTACAAACCATTCTAGGATTGCAGTCTCGTCCATTGATAGGATCTGGAACAAACTTGGAAATGCCAACTGGGGAGACATTGGTGCTTTACAGTTACTCTTTGCTACCTTCCATTGTATTGTGCAATTTGCTGGATTTCCCAAGCACTCAATAGAGGATTTAGCTGCTGACCATGGTCCTCGCCTCCAAGCAAGAAGGACTGAGAGGCAGTTGGGGAATTCCCGGGCGAATGGAAATGGTCTGTGTCGGTTCCAGCAGCGCAATGTATCCCCAGAAATCGTTGAAGTTGAGGATGATTCTGCTAAAATTGAGACCGAACAGTTAATGAAGCTAGAAGCAGGATCTGTATTATGGTTGGAGGATTCTAACTGGCAAAAAGGTTACCAGATCAATCAAGTCTTGAATAACAGTGAACATCCATATTACATTGCTTCTCCGGTTGAAGAACCTCAGAAAAGTTTGTTTCTATATGTTGGTTCTCATCCTTCCCAGCTGGAGCCCGCGTGGGAGGATATGAATCTGTGGTATCAAGTTCAGAGGCAGACGAAAATATTGACTACTATGAAACAGAGAGGTCTATCTAGCAAGTATCTACCTCAGTTAAGTGCTTCTGGCAGGATTATTCACCCTGGTCATTGTCAGAAACCCAGCTCGGGTGGAAACTGTGATCACCCCTGGTGTGGCACCCCGATTCTTGTGACCAGCCCAGTTGGTGAAACAGTGGCTCATATGACAAGTGAAGCCAGATTTGGTATGGAGGACGCGATCAGATGTTGCCATGATTGCTTATCTGCACTTTCAACTGCTGCTTCTGCAGGAATTCGCCACGGAGACATCAGGCCTGAGAATGTGATTTGTGTCAGGTCTGCCGAGAAGCAACCTTATTTTGTTCTTATTGGTTGGGGACGTGCTATTCTTGAAGATAGGGACCGCCCTGCAATGAACCTTCATTTCTCTTCTACTTATGCTCTCCAGGAGGGAAAGCTCTGCTCAGCTTCAGATGCAGAGAGCCTTGTTTACATGCTTTATATTTCGTGTGGTGGGGTTCTACCTGATCTGGATTCCGTTGAGGGGGCACTGCAGTGGAGAGAGACTTCTTGGTCCAGAAGATTAATTCAACAGAAGTTAGGTGAGGCCTCAACTGTGTTGAAAGCATTTGCCGATTATGTTGATAGTCTATGTGGGACACCATATCCCATGGACTATGATATATGGCTAAGAAGGTTGAGGAGAAACATTAATGAGGATGATTCTGGGAAGGAAATTGATACGTTGGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

699

Amino Acids

78.19

Weight (kDa)

5.39

Isoelectric Point (pI)

52.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40980
fragaria_vesca	FvH4_1g29580 FvH4_1g29580
malus_domestica	MD12G1015800.v1.1 MD14G1013800.v1.1
prunus_persica	Prupe.7G024700_v2.0.a1 Prupe.7G024700_v2.0.a1 Prupe.7G024700_v2.0.a1
pyrus_communis	pycom12g01310 pycom14g01170
rosa_chinensis	RchiOBHm_Chr3g0495221
rosa_laevigata	RLG00000022636
rosa_multiflora	Rmu_sc0000814.1_g000009
rosa_roxburghii	Rroxscaffold_6G00390670
rosa_rugosa	Rorug03G0270900 Rorug03G0271000
rosa_samantha	Rh3AG319800 Rh3BG354900 Rh3CG351800 Rh3DG353900
rosa_wichuraiana	Rw3G027940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	250
AasI	GACNNNNNNGTC	2 cut(s)	49, 1915
Acc36I	ACCTGC	1 cut(s)	250
AccB1I	GGYRCC	1 cut(s)	1499
AccI	GTMKAC	1 cut(s)	111
AccII	CGCG	2 cut(s)	1319, 1580
AciI	CCGC	2 cut(s)	1317, 1747
AclWI	GGATC	3 cut(s)	546, 866, 1165
AcsI	RAATTY	3 cut(s)	437, 1033, 1635
AcuI	CTGAAG	1 cut(s)	1797
AfaI	GTAC	1 cut(s)	654
AfiI	CCNNNNNNNGG	4 cut(s)	855, 1469, 1496, 1887
AgeI	ACCGGT	1 cut(s)	494
AjiI	CACGTC	1 cut(s)	1724
AjnI	CCWGG	5 cut(s)	21, 444, 1444, 1490, 1788
AjuI	GAANNNNNNNTTGG	2 cut(s)	1548, 1580
AleI	CACNNNNGTG	1 cut(s)	1897
Alw26I	GTCTC	7 cut(s)	81, 561, 847, 885, 1121, 1641, 1901
AlwI	GGATC	3 cut(s)	546, 866, 1165
AlwNI	CAGNNNCTG	1 cut(s)	1160
Ama87I	CYCGRG	2 cut(s)	1038, 1468
AoxI	GGCC	5 cut(s)	186, 566, 630, 1655, 1950
ApeKI	GCWGC	5 cut(s)	604, 806, 980, 1072, 1622
ApoI	RAATTY	3 cut(s)	437, 1033, 1635
AseI	ATTAAT	2 cut(s)	1928, 2055
AsiGI	ACCGGT	1 cut(s)	494
Asp700I	GAANNNNTTC	1 cut(s)	583
AspLEI	GCGC	1 cut(s)	1077
AspS9I	GGNCC	4 cut(s)	631, 992, 1744, 1917
AsuC2I	CCSGG	2 cut(s)	1039, 1040
AsuHPI	GGTGA	5 cut(s)	274, 1433, 1478, 1541, 1958
AvaI	CYCGRG	2 cut(s)	1038, 1468
AvaII	GGWCC	3 cut(s)	992, 1744, 1917
BaeGI	GKGCMC	1 cut(s)	1894
BanI	GGYRCC	1 cut(s)	1499
BanII	GRGCYC	1 cut(s)	1317
BarI	GAAGNNNNNNTAC	2 cut(s)	327, 359
BbsI	GAAGAC	1 cut(s)	147
BbvI	GCAGC	5 cut(s)	616, 818, 967, 1084, 1609
BccI	CCATC	2 cut(s)	461, 766
BciT130I	CCWGG	5 cut(s)	23, 446, 1446, 1492, 1790
BciVI	GTATCC	1 cut(s)	1093
BclI	TGATCA	1 cut(s)	1483
BcnI	CCSGG	2 cut(s)	1039, 1040
BcoDI	GTCTC	7 cut(s)	81, 561, 847, 885, 1121, 1641, 1901
BfaI	CTAG	5 cut(s)	54, 516, 831, 1148, 1398
BfmI	CTRYAG	2 cut(s)	1629, 1895
BfuAI	ACCTGC	1 cut(s)	250
BfuI	GTATCC	1 cut(s)	1093
BisI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
BlpI	GCTNAGC	1 cut(s)	1807
BlsI	GCNGC	5 cut(s)	606, 808, 982, 1074, 1624
Bme1390I	CCNGG	7 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790
Bme18I	GGWCC	3 cut(s)	992, 1744, 1917
BmeT110I	CYCGRG	2 cut(s)	1038, 1468
BmgBI	CACGTC	1 cut(s)	1724
BmgT120I	GGNCC	4 cut(s)	631, 992, 1744, 1917
BmiI	GGNNCC	4 cut(s)	1067, 1314, 1501, 1745
BmrFI	CCNGG	7 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790
BmrI	ACTGGG	2 cut(s)	895, 1517
BmsI	GCATC	4 cut(s)	68, 261, 292, 1807
BmuI	ACTGGG	2 cut(s)	895, 1517
BoxI	GACNNNNGTC	1 cut(s)	990
BpiI	GAAGAC	1 cut(s)	147
BpmI	CTGGAG	2 cut(s)	1331, 1772
Bpu1102I	GCTNAGC	1 cut(s)	1807
BpuEI	CTTGAG	1 cut(s)	691
BpuMI	CCSGG	2 cut(s)	1039, 1040
BsaBI	GATNNNNATC	1 cut(s)	1332
BsaI	GGTCTC	2 cut(s)	81, 1121
BsaJI	CCNNGG	8 cut(s)	526, 588, 988, 1038, 1444, 1490, 1642, 2013
BsaWI	WCCGGW	2 cut(s)	494, 1252
BsaXI	ACNNNNNCTCC	4 cut(s)	40, 70, 1304, 1334
Bsc4I	CCNNNNNNNGG	4 cut(s)	855, 1469, 1496, 1887
Bse118I	RCCGGY	3 cut(s)	184, 350, 494
Bse1I	ACTGG	4 cut(s)	149, 890, 1190, 1523
Bse3DI	GCAATG	3 cut(s)	1084, 1242, 1761
Bse8I	GATNNNNATC	1 cut(s)	1332
BseBI	CCWGG	5 cut(s)	23, 446, 1446, 1492, 1790
BseDI	CCNNGG	8 cut(s)	526, 588, 988, 1038, 1444, 1490, 1642, 2013
BseGI	GGATG	8 cut(s)	276, 307, 472, 520, 1114, 1231, 1297, 2068
BseJI	GATNNNNATC	1 cut(s)	1332
BseLI	CCNNNNNNNGG	4 cut(s)	855, 1469, 1496, 1887
BseMI	GCAATG	3 cut(s)	1084, 1242, 1761
BseMII	CTCAG	8 cut(s)	441, 704, 743, 1008, 1280, 1427, 1650, 1821
BseNI	ACTGG	4 cut(s)	149, 890, 1190, 1523
BseRI	GAGGAG	1 cut(s)	2059
BseSI	GKGCMC	1 cut(s)	1894
BseXI	GCAGC	5 cut(s)	616, 818, 967, 1084, 1609
BseYI	CCCAGC	2 cut(s)	1305, 1463
BsgI	GTGCAG	2 cut(s)	825, 1593
Bsh1236I	CGCG	2 cut(s)	1319, 1580
BshFI	GGCC	5 cut(s)	188, 568, 632, 1657, 1952
BshNI	GGYRCC	1 cut(s)	1499
BshTI	ACCGGT	1 cut(s)	494
BsiHKCI	CYCGRG	2 cut(s)	1038, 1468
BsiSI	CCGG	5 cut(s)	185, 351, 495, 1039, 1253
BslFI	GGGAC	4 cut(s)	55, 1734, 1757, 2014
BslI	CCNNNNNNNGG	4 cut(s)	855, 1469, 1496, 1887
BsmAI	GTCTC	7 cut(s)	81, 561, 847, 885, 1121, 1641, 1901
BsmFI	GGGAC	4 cut(s)	55, 1734, 1757, 2014
BsmI	GAATGC	1 cut(s)	374
BsnI	GGCC	5 cut(s)	188, 568, 632, 1657, 1952
Bso31I	GGTCTC	2 cut(s)	81, 1121
BsoBI	CYCGRG	2 cut(s)	1038, 1468
Bsp1286I	GDGCHC	2 cut(s)	1317, 1894
Bsp143I	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
Bsp1720I	GCTNAGC	1 cut(s)	1807
Bsp19I	CCATGG	3 cut(s)	588, 988, 2013
BspACI	CCGC	2 cut(s)	1317, 1747
BspANI	GGCC	5 cut(s)	188, 568, 632, 1657, 1952
BspCNI	CTCAG	8 cut(s)	442, 703, 742, 1009, 1279, 1426, 1651, 1820
BspFNI	CGCG	2 cut(s)	1319, 1580
BspLI	GGNNCC	4 cut(s)	1067, 1314, 1501, 1745
BspMAI	CTGCAG	2 cut(s)	1633, 1899
BspMI	ACCTGC	1 cut(s)	250
BspPI	GGATC	3 cut(s)	546, 866, 1165
BspQI	GCTCTTC	1 cut(s)	651
BspT107I	GGYRCC	1 cut(s)	1499
BspTNI	GGTCTC	2 cut(s)	81, 1121
BsrDI	GCAATG	3 cut(s)	1084, 1242, 1761
BsrFI	RCCGGY	3 cut(s)	184, 350, 494
BsrI	ACTGG	4 cut(s)	149, 890, 1190, 1523
BssAI	RCCGGY	3 cut(s)	184, 350, 494
BssECI	CCNNGG	8 cut(s)	526, 588, 988, 1038, 1444, 1490, 1642, 2013
BssMI	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
BssT1I	CCWWGG	3 cut(s)	588, 988, 2013
Bst2UI	CCWGG	5 cut(s)	23, 446, 1446, 1492, 1790
Bst4CI	ACNGT	8 cut(s)	116, 555, 909, 1137, 1226, 1481, 1537, 1960
Bst6I	CTCTTC	2 cut(s)	651, 1777
BstC8I	GCNNGC	2 cut(s)	122, 1317
BstDEI	CTNAG	9 cut(s)	450, 690, 729, 1017, 1266, 1413, 1659, 1807, 2033
BstDSI	CCRYGG	5 cut(s)	526, 588, 988, 1642, 2013
BstEII	GGTNACC	1 cut(s)	1196
BstF5I	GGATG	8 cut(s)	276, 307, 472, 520, 1114, 1231, 1297, 2068
BstFNI	CGCG	2 cut(s)	1319, 1580
BstHHI	GCGC	1 cut(s)	1077
BstKTI	GATC	7 cut(s)	541, 861, 1160, 1206, 1486, 1584, 1873
BstMAI	GTCTC	7 cut(s)	81, 561, 847, 885, 1121, 1641, 1901
BstMBI	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
BstMWI	GCNNNNNNNGC	6 cut(s)	311, 326, 455, 1599, 1628, 1817
BstNI	CCWGG	5 cut(s)	23, 446, 1446, 1492, 1790
BstNSI	RCATGY	3 cut(s)	124, 350, 1840
BstPAI	GACNNNNGTC	1 cut(s)	990
BstPI	GGTNACC	1 cut(s)	1196
BstSCI	CCNGG	7 cut(s)	21, 444, 1037, 1038, 1444, 1490, 1788
BstSFI	CTRYAG	2 cut(s)	1629, 1895
BstSLI	GKGCMC	1 cut(s)	1894
BstUI	CGCG	2 cut(s)	1319, 1580
BstV1I	GCAGC	5 cut(s)	616, 818, 967, 1084, 1609
BstV2I	GAAGAC	1 cut(s)	147
BstX2I	RGATCY	2 cut(s)	858, 1157
BstYI	RGATCY	2 cut(s)	858, 1157
BsuI	GTATCC	1 cut(s)	1093
BsuRI	GGCC	5 cut(s)	188, 568, 632, 1657, 1952
BtgI	CCRYGG	5 cut(s)	526, 588, 988, 1642, 2013
BtrI	CACGTC	1 cut(s)	1724
BtsCI	GGATG	8 cut(s)	276, 307, 472, 520, 1114, 1231, 1297, 2068
BtsI	GCAGTG	2 cut(s)	1892, 1904
BtsIMutI	CAGTG	5 cut(s)	121, 1231, 1542, 1892, 1904
BveI	ACCTGC	1 cut(s)	250
Cac8I	GCNNGC	2 cut(s)	122, 1317
CaiI	CAGNNNCTG	1 cut(s)	1160
CfoI	GCGC	1 cut(s)	1077
Cfr10I	RCCGGY	3 cut(s)	184, 350, 494
Cfr13I	GGNCC	4 cut(s)	631, 992, 1744, 1917
Cfr9I	CCCGGG	1 cut(s)	1038
CseI	GACGC	1 cut(s)	1586
Csp6I	GTAC	1 cut(s)	653
CspAI	ACCGGT	1 cut(s)	494
CviAII	CATG	7 cut(s)	121, 347, 589, 989, 1595, 1837, 2014
CviQI	GTAC	1 cut(s)	653
DdeI	CTNAG	9 cut(s)	450, 690, 729, 1017, 1266, 1413, 1659, 1807, 2033
DpnI	GATC	7 cut(s)	540, 860, 1159, 1205, 1485, 1583, 1872
DpnII	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
DrdI	GACNNNNNNGTC	2 cut(s)	49, 1915
DseDI	GACNNNNNNGTC	2 cut(s)	49, 1915
Eam1104I	CTCTTC	2 cut(s)	651, 1777
EarI	CTCTTC	2 cut(s)	651, 1777
Eco130I	CCWWGG	3 cut(s)	588, 988, 2013
Eco147I	AGGCCT	3 cut(s)	568, 1657, 1952
Eco24I	GRGCYC	1 cut(s)	1317
Eco31I	GGTCTC	2 cut(s)	81, 1121
Eco32I	GATATC	1 cut(s)	574
Eco47I	GGWCC	3 cut(s)	992, 1744, 1917
Eco57I	CTGAAG	1 cut(s)	1797
Eco88I	CYCGRG	2 cut(s)	1038, 1468
Eco91I	GGTNACC	1 cut(s)	1196
EcoO109I	RGGNCCY	1 cut(s)	631
EcoO65I	GGTNACC	1 cut(s)	1196
EcoRI	GAATTC	2 cut(s)	1033, 1635
EcoRII	CCWGG	5 cut(s)	21, 444, 1444, 1490, 1788
EcoRV	GATATC	1 cut(s)	574
EcoT14I	CCWWGG	3 cut(s)	588, 988, 2013
EcoT22I	ATGCAT	1 cut(s)	238
EcoT38I	GRGCYC	1 cut(s)	1317
ErhI	CCWWGG	3 cut(s)	588, 988, 2013
FaeI	CATG	7 cut(s)	124, 350, 592, 992, 1598, 1840, 2017
FaqI	GGGAC	4 cut(s)	55, 1734, 1757, 2014
FatI	CATG	7 cut(s)	120, 346, 588, 988, 1594, 1836, 2013
FauI	CCCGC	1 cut(s)	1324
FauNDI	CATATG	1 cut(s)	1545
FbaI	TGATCA	1 cut(s)	1483
FblI	GTMKAC	1 cut(s)	111
Fnu4HI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
FokI	GGATG	8 cut(s)	283, 314, 479, 507, 1121, 1218, 1284, 2075
FriOI	GRGCYC	1 cut(s)	1317
Fsp4HI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
FspBI	CTAG	5 cut(s)	54, 516, 831, 1148, 1398
GlaI	GCGC	1 cut(s)	1076
GluI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
GsaI	CCCAGC	2 cut(s)	1309, 1467
GsuI	CTGGAG	2 cut(s)	1331, 1772
HaeIII	GGCC	5 cut(s)	188, 568, 632, 1657, 1952
HapII	CCGG	5 cut(s)	185, 351, 495, 1039, 1253
HgaI	GACGC	1 cut(s)	1586
HhaI	GCGC	1 cut(s)	1077
Hin1II	CATG	7 cut(s)	124, 350, 592, 992, 1598, 1840, 2017
Hin6I	GCGC	1 cut(s)	1075
HinP1I	GCGC	1 cut(s)	1075
HindIII	AAGCTT	2 cut(s)	473, 667
HpaII	CCGG	5 cut(s)	185, 351, 495, 1039, 1253
HphI	GGTGA	5 cut(s)	274, 1433, 1478, 1541, 1958
Hpy166II	GTNNAC	5 cut(s)	112, 653, 796, 1229, 1834
Hpy188I	TCNGA	9 cut(s)	172, 301, 578, 693, 1269, 1353, 1458, 1586, 1816
Hpy188III	TCNNGA	9 cut(s)	379, 386, 548, 663, 862, 1216, 1733, 1874, 1920
Hpy8I	GTNNAC	5 cut(s)	112, 653, 796, 1229, 1834
HpyCH4III	ACNGT	8 cut(s)	116, 555, 909, 1137, 1226, 1481, 1537, 1960
HpyCH4IV	ACGT	2 cut(s)	1723, 2087
HpyF10VI	GCNNNNNNNGC	6 cut(s)	311, 326, 455, 1599, 1628, 1817
HpyF3I	CTNAG	9 cut(s)	450, 690, 729, 1017, 1266, 1413, 1659, 1807, 2033
HpySE526I	ACGT	2 cut(s)	1723, 2087
Hsp92II	CATG	7 cut(s)	124, 350, 592, 992, 1598, 1840, 2017
HspAI	GCGC	1 cut(s)	1075
Ksp22I	TGATCA	1 cut(s)	1483
Kzo9I	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	1 cut(s)	1312
Lsp1109I	GCAGC	5 cut(s)	616, 818, 967, 1084, 1609
LweI	GCATC	4 cut(s)	68, 261, 292, 1807
MaeI	CTAG	5 cut(s)	54, 516, 831, 1148, 1398
MaeII	ACGT	2 cut(s)	1723, 2087
MaeIII	GTNAC	5 cut(s)	80, 596, 909, 1196, 1513
MalI	GATC	7 cut(s)	540, 860, 1159, 1205, 1485, 1583, 1872
MboI	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
MboII	GAAGA	9 cut(s)	89, 152, 347, 638, 707, 1271, 1748, 1764, 1935
MfeI	CAATTG	1 cut(s)	459
MflI	RGATCY	2 cut(s)	858, 1157
MhlI	GDGCHC	2 cut(s)	1317, 1894
MmeI	TCCRAC	2 cut(s)	186, 1152
Mph1103I	ATGCAT	1 cut(s)	238
MroXI	GAANNNNTTC	1 cut(s)	583
MseI	TTAA	5 cut(s)	563, 1139, 1418, 1928, 2055
MslI	CAYNNNNRTG	3 cut(s)	351, 525, 1897
MspA1I	CMGCKG	2 cut(s)	809, 1309
MspI	CCGG	5 cut(s)	185, 351, 495, 1039, 1253
MspR9I	CCNGG	7 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790
MunI	CAATTG	1 cut(s)	459
Mva1269I	GAATGC	1 cut(s)	374
MvaI	CCWGG	5 cut(s)	23, 446, 1446, 1492, 1790
MvnI	CGCG	2 cut(s)	1319, 1580
MwoI	GCNNNNNNNGC	6 cut(s)	311, 326, 455, 1599, 1628, 1817
NciI	CCSGG	2 cut(s)	1039, 1040
NcoI	CCATGG	3 cut(s)	588, 988, 2013
NdeI	CATATG	1 cut(s)	1545
NdeII	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
NlaIII	CATG	7 cut(s)	124, 350, 592, 992, 1598, 1840, 2017
NlaIV	GGNNCC	4 cut(s)	1067, 1314, 1501, 1745
NmeAIII	GCCGAG	1 cut(s)	1711
NmuCI	GTSAC	2 cut(s)	596, 1513
NsiI	ATGCAT	1 cut(s)	238
NspI	RCATGY	3 cut(s)	124, 350, 1840
OliI	CACNNNNGTG	1 cut(s)	1897
PaeI	GCATGC	1 cut(s)	124
PaqCI	CACCTGC	1 cut(s)	250
PceI	AGGCCT	3 cut(s)	568, 1657, 1952
PciSI	GCTCTTC	1 cut(s)	651
PctI	GAATGC	1 cut(s)	374
PdmI	GAANNNNTTC	1 cut(s)	583
PfoI	TCCNGGA	1 cut(s)	1788
PinAI	ACCGGT	1 cut(s)	494
PkrI	GCNGC	5 cut(s)	606, 808, 982, 1074, 1624
PshAI	GACNNNNGTC	1 cut(s)	990
PshBI	ATTAAT	2 cut(s)	1928, 2055
Psp6I	CCWGG	5 cut(s)	21, 444, 1444, 1490, 1788
PspEI	GGTNACC	1 cut(s)	1196
PspFI	CCCAGC	2 cut(s)	1305, 1463
PspGI	CCWGG	5 cut(s)	21, 444, 1444, 1490, 1788
PspN4I	GGNNCC	4 cut(s)	1067, 1314, 1501, 1745
PspPI	GGNCC	4 cut(s)	631, 992, 1744, 1917
PstI	CTGCAG	2 cut(s)	1633, 1899
PstNI	CAGNNNCTG	1 cut(s)	1160
PsuI	RGATCY	2 cut(s)	858, 1157
PvuII	CAGCTG	2 cut(s)	809, 1309
RsaI	GTAC	1 cut(s)	654
RsaNI	GTAC	1 cut(s)	653
RseI	CAYNNNNRTG	3 cut(s)	351, 525, 1897
SapI	GCTCTTC	1 cut(s)	651
SaqAI	TTAA	5 cut(s)	563, 1139, 1418, 1928, 2055
SatI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
Sau3AI	GATC	7 cut(s)	538, 858, 1157, 1203, 1483, 1581, 1870
Sau96I	GGNCC	4 cut(s)	631, 992, 1744, 1917
ScrFI	CCNGG	7 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790
SduI	GDGCHC	2 cut(s)	1317, 1894
SfaNI	GCATC	4 cut(s)	68, 261, 292, 1807
SfcI	CTRYAG	2 cut(s)	1629, 1895
SinI	GGWCC	3 cut(s)	992, 1744, 1917
SmaI	CCCGGG	1 cut(s)	1040
SmiMI	CAYNNNNRTG	3 cut(s)	351, 525, 1897
SmlI	CTYRAG	1 cut(s)	670
SmoI	CTYRAG	1 cut(s)	670
SphI	GCATGC	1 cut(s)	124
SseBI	AGGCCT	3 cut(s)	568, 1657, 1952
SsiI	CCGC	2 cut(s)	1317, 1747
SspI	AATATT	1 cut(s)	1368
SspMI	CTAG	5 cut(s)	54, 516, 831, 1148, 1398
StuI	AGGCCT	3 cut(s)	568, 1657, 1952
StyD4I	CCNGG	7 cut(s)	21, 444, 1037, 1038, 1444, 1490, 1788
StyI	CCWWGG	3 cut(s)	588, 988, 2013
TaaI	ACNGT	8 cut(s)	116, 555, 909, 1137, 1226, 1481, 1537, 1960
TaiI	ACGT	2 cut(s)	1726, 2090
TaqII	GACCGA	1 cut(s)	1145
TatI	WGTACW	1 cut(s)	652
Tru1I	TTAA	5 cut(s)	563, 1139, 1418, 1928, 2055
Tru9I	TTAA	5 cut(s)	563, 1139, 1418, 1928, 2055
TscAI	CASTG	5 cut(s)	121, 1231, 1542, 1899, 1904
TseFI	GTSAC	2 cut(s)	596, 1513
TseI	GCWGC	5 cut(s)	604, 806, 980, 1072, 1622
Tsp45I	GTSAC	2 cut(s)	596, 1513
TspGWI	ACGGA	3 cut(s)	271, 1659, 1870
TspMI	CCCGGG	1 cut(s)	1038
TspRI	CASTG	5 cut(s)	121, 1231, 1542, 1899, 1904
VpaK11BI	GGWCC	3 cut(s)	992, 1744, 1917
VspI	ATTAAT	2 cut(s)	1928, 2055
XapI	RAATTY	3 cut(s)	437, 1033, 1635
XceI	RCATGY	3 cut(s)	124, 350, 1840
XcmI	CCANNNNNNNNNTGG	2 cut(s)	29, 1567
XmaI	CCCGGG	1 cut(s)	1038
XmiI	GTMKAC	1 cut(s)	111
XmnI	GAANNNNTTC	1 cut(s)	583
XspI	CTAG	5 cut(s)	54, 516, 831, 1148, 1398
Zsp2I	ATGCAT	1 cut(s)	238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.