Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0010054

Physical Location & Seq

Genomic Coordinates Reverse (-)

40665264 .. 40669715

Gene Structure 4452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G027940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGAAGCAGGTGGGTCTCCGGACCAGGAATCAATAGGGTCTGGGACAAAGAGGTCTACTGTATCATCAGGGAGTAGGCCTCGTAAATGCAAGGAATTTCTTTATAGGTTTGTAGACAGTGACAGACTCACTGCAAACCTTGAACAGTGGTTTGAATCTGTATCTAATAAATCAGCATTAAAGAAACCTGCCTTTAATGAGCCTTTTGAGTTGATAGAGCTTCAAAAGTTTGAGTATGCACTAGAAGGGATTTCATTTCAGCAGTTGATTAGGATGCCCAGTGCTGTTCATGCTTCAACTTCTGGTGCTGTGGAAGCAACTGCTTATCTTGCCATTGAAGATTTTTTACATGCCAGTGTTAAGGGCTTGTGGGAAGCATTCTGGAGTCCGGATGAGCCCATGCCTTTCTCTGTTGCTTGTTTGTACAATGAAAACTTAAAATTCTATCAAGCTGAGAATGCAGTTGCTGAGGGTCGGCTTGGAGGTCTCTGTGCTACTGGTATATTACTTACAAACCCTAGACATCCGCATGGGAAATGGGATCATATTCTTGAGTTGGCTCTTTTAAGGCCTGATATTGGAGGCTTTGTTGTAAATGGTGATGGGCAGCCTTCGCTCTCTGTTATTGGTGAGGCCCTTTTCTATGCTCTCCGAGTACTAATATCAAGAAGCTTGAGCCGAATGAAATACTGTCAGACTTCAAACTCTGTTTTTGTTCTTCTAGTTGATTCTCAATATGGTGGGGTTGTAAAGGTTGAAGGAGATGTAAATAAGTTGGAGTTTGATGTTGATAATGTTTATGAATGTGCTGCTGAATGGATTGAAAATCATTCTACGGTTGCAGTCTCTTCAATTGACAGGATTTGGAACAAGCTTGGAAATGCCAACTGGGGAGATATTGGTGCTTTACAGATACTTTTTGCTACCTTCCACTGTATCACACAATTTGCTGGATTTCCCAAGCACTCAATAGAGGATTTAGCTGCAGATCATGGTTCTCGTCTCCAAACAAGAAGAGCTGAGAGGCAGTTGGGGGATACTGAGGTGAATGGGAATGGTCTATTTCGGTTTCAGCAGCGTACGGTTTCCCCTGAAATTGTTGAAGTTCAGGATGATTCCATCAAAATTGAGTCTGAACAGTTAATGAAGCTAGAAGTAGGATCTGTATTGTGGTTGGAGGATTCTAACTGGCAAAAAGGTTACCAGATCAATGAAGTTATGATTAGCAGCGAACAGCCATATTACATTGCATCTCCAGTGGAAGATCCTCAGAAAAGTGTGTTTCTATATGTTGGCTCTCATCCTTCCCAGCTGGAGCCTGCATGGGAGGATATGAATATGTGGTATCAAGTTCAGAGGCAGACTAAAATATTGACTATTATGAAACAGAAAGGTCTTTCTAGCAAGTATTTACCCCAGTTGAGTGCATCTGGCAGGATTATTCACCCTGGTCAGTGTCAGAGACCCAGCTCGGGCGGAAATTGTGATCACCCTTGGTGTGGCACCTCGATCCTCGTGACAAGGCCAGTTGGTGAAACAGTAGCTGATTTGATCAATCAGGGTAGATTTGGTGCGGAAGAGGCTATTAGGTGTTGCCATGATTGCTTATCTGCACTTTCAACTGCTGCTTCTGCAGGAATTCGACATGGAGACATCAGGCCAGAGAATGTGATACAAGTCAGGTCTTCAGCAAGACATCCCTTTTTTGTCCTCATTGGGTGGGGACGTGCTATTCTTGAAGATAGGGACCGACCTGCAATGAACCTTCATTTCTCTTCAACCTATGCTCTCCAGGAGGGAAAGTTATGCTCAGCTTCAGATGCTGAGAGCCTTGTTTATATGCTTTATATTTCCTGTGGTGGGGTTTTACCTGATCTTGATTCAGTTGAAGGGGCACTGCAGTGGAGAGAGACTTCTTGGTCTAGGAGACTAATTCAACAGAAGCTAGGCGATGCCTCAACTGTGTTAAAAGCATTTTCTGATTATGTTGATAGTCTATGCGGGACACCATATCTCATGGATTATGATATATGGCTAAGAAGGTTGAGGAGAAATATTAATGAGGAAAATGGAAAGGAAATTGATACATCAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

698

Amino Acids

77.87

Weight (kDa)

5.32

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40980
fragaria_vesca	FvH4_1g29580 FvH4_1g29580
malus_domestica	MD12G1015800.v1.1 MD14G1013800.v1.1
prunus_persica	Prupe.7G024700_v2.0.a1 Prupe.7G024700_v2.0.a1 Prupe.7G024700_v2.0.a1
pyrus_communis	pycom12g01310 pycom14g01170
rosa_chinensis	RchiOBHm_Chr3g0495221
rosa_laevigata	RLG00000022636
rosa_multiflora	Rmu_sc0000814.1_g000009
rosa_roxburghii	Rroxscaffold_6G00390670
rosa_rugosa	Rorug03G0270900 Rorug03G0271000
rosa_samantha	Rh3AG319800 Rh3BG354900 Rh3CG351800 Rh3DG353900
rosa_wichuraiana	Rw3G027940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	52, 1918
Acc36I	ACCTGC	2 cut(s)	196, 1762
AccB1I	GGYRCC	1 cut(s)	1502
AccI	GTMKAC	2 cut(s)	56, 114
AccIII	TCCGGA	2 cut(s)	19, 388
AciI	CCGC	4 cut(s)	527, 1476, 1574, 2001
AclWI	GGATC	4 cut(s)	549, 1168, 1259, 1504
AcsI	RAATTY	3 cut(s)	95, 440, 1638
AcuI	CTGAAG	2 cut(s)	1671, 1800
AfaI	GTAC	3 cut(s)	425, 657, 1081
AfiI	CCNNNNNNNGG	4 cut(s)	578, 1472, 1499, 1860
AjiI	CACGTC	1 cut(s)	1727
AjnI	CCWGG	3 cut(s)	24, 1447, 1791
AleI	CACNNNNGTG	1 cut(s)	1900
Alw26I	GTCTC	8 cut(s)	21, 491, 850, 1007, 1456, 1644, 1904, 1921
AlwI	GGATC	4 cut(s)	549, 1168, 1259, 1504
AlwNI	CAGNNNCTG	3 cut(s)	467, 1544, 1823
Ama87I	CYCGRG	1 cut(s)	1471
Aor13HI	TCCGGA	2 cut(s)	19, 388
AoxI	GGCC	5 cut(s)	77, 569, 633, 1523, 1658
ApeKI	GCWGC	6 cut(s)	607, 809, 983, 1075, 1227, 1625
ApoI	RAATTY	3 cut(s)	95, 440, 1638
AseI	ATTAAT	1 cut(s)	2058
AspS9I	GGNCC	3 cut(s)	22, 634, 1747
AsuHPI	GGTGA	6 cut(s)	611, 641, 1057, 1436, 1481, 1544
AvaI	CYCGRG	1 cut(s)	1471
AvaII	GGWCC	2 cut(s)	22, 1747
BaeGI	GKGCMC	1 cut(s)	1897
BaeI	ACNNNNGTAYC	2 cut(s)	1029, 1062
BanI	GGYRCC	1 cut(s)	1502
BanII	GRGCYC	1 cut(s)	399
BarI	GAAGNNNNNNTAC	2 cut(s)	330, 362
BauI	CACGAG	1 cut(s)	1514
BbsI	GAAGAC	1 cut(s)	1677
BbvCI	CCTCAGC	1 cut(s)	468
BbvI	GCAGC	6 cut(s)	619, 796, 970, 1087, 1239, 1612
BccI	CCATC	2 cut(s)	596, 1127
BciT130I	CCWGG	3 cut(s)	26, 1449, 1793
BciVI	GTATCC	1 cut(s)	1030
BclI	TGATCA	2 cut(s)	1486, 1551
BcoDI	GTCTC	8 cut(s)	21, 491, 850, 1007, 1456, 1644, 1904, 1921
BfaI	CTAG	7 cut(s)	242, 519, 722, 1151, 1401, 1923, 1946
BfmI	CTRYAG	3 cut(s)	984, 1632, 1898
BfuAI	ACCTGC	2 cut(s)	196, 1762
BfuI	GTATCC	1 cut(s)	1030
BisI	GCNGC	6 cut(s)	608, 810, 984, 1076, 1228, 1626
BlpI	GCTNAGC	1 cut(s)	1810
BlsI	GCNGC	6 cut(s)	609, 811, 985, 1077, 1229, 1627
BmcAI	AGTACT	1 cut(s)	657
Bme1390I	CCNGG	3 cut(s)	26, 1449, 1793
Bme18I	GGWCC	2 cut(s)	22, 1747
BmeT110I	CYCGRG	1 cut(s)	1471
BmgBI	CACGTC	1 cut(s)	1727
BmgT120I	GGNCC	3 cut(s)	22, 634, 1747
BmiI	GGNNCC	3 cut(s)	1317, 1504, 1748
BmrFI	CCNGG	3 cut(s)	26, 1449, 1793
BmrI	ACTGGG	3 cut(s)	273, 898, 1411
BmsI	GCATC	5 cut(s)	264, 1259, 1436, 1810, 1942
BmuI	ACTGGG	3 cut(s)	273, 898, 1411
BpiI	GAAGAC	1 cut(s)	1677
BplI	GAGNNNNNCTC	2 cut(s)	64, 96
BpmI	CTGGAG	4 cut(s)	403, 1239, 1334, 1775
Bpu10I	CCTNAGC	1 cut(s)	468
Bpu1102I	GCTNAGC	1 cut(s)	1810
BpuEI	CTTGAG	2 cut(s)	572, 694
BsaI	GGTCTC	3 cut(s)	21, 491, 1456
BsaJI	CCNNGG	2 cut(s)	1447, 1493
BsaWI	WCCGGW	2 cut(s)	19, 388
BsaXI	ACNNNNNCTCC	4 cut(s)	573, 603, 1787, 1817
Bsc4I	CCNNNNNNNGG	4 cut(s)	578, 1472, 1499, 1860
Bse1I	ACTGG	8 cut(s)	279, 354, 502, 893, 1193, 1256, 1417, 1526
Bse3DI	GCAATG	2 cut(s)	1245, 1764
BseAI	TCCGGA	2 cut(s)	19, 388
BseBI	CCWGG	3 cut(s)	26, 1449, 1793
BseDI	CCNNGG	2 cut(s)	1447, 1493
BseGI	GGATG	6 cut(s)	279, 397, 523, 1117, 1300, 1696
BseLI	CCNNNNNNNGG	4 cut(s)	578, 1472, 1499, 1860
BseMI	GCAATG	2 cut(s)	1245, 1764
BseMII	CTCAG	7 cut(s)	444, 459, 1011, 1032, 1283, 1815, 1824
BseNI	ACTGG	8 cut(s)	279, 354, 502, 893, 1193, 1256, 1417, 1526
BseRI	GAGGAG	1 cut(s)	2062
BseSI	GKGCMC	1 cut(s)	1897
BseXI	GCAGC	6 cut(s)	619, 796, 970, 1087, 1239, 1612
BseYI	CCCAGC	2 cut(s)	1308, 1466
BsgI	GTGCAG	1 cut(s)	1596
BshFI	GGCC	5 cut(s)	79, 571, 635, 1525, 1660
BshNI	GGYRCC	1 cut(s)	1502
BsiHKCI	CYCGRG	1 cut(s)	1471
BsiSI	CCGG	2 cut(s)	20, 389
BsiWI	CGTACG	1 cut(s)	1079
BslFI	GGGAC	4 cut(s)	58, 1737, 1760, 2017
BslI	CCNNNNNNNGG	4 cut(s)	578, 1472, 1499, 1860
BsmAI	GTCTC	8 cut(s)	21, 491, 850, 1007, 1456, 1644, 1904, 1921
BsmBI	CGTCTC	1 cut(s)	1007
BsmFI	GGGAC	4 cut(s)	58, 1737, 1760, 2017
BsmI	GAATGC	2 cut(s)	377, 463
BsnI	GGCC	5 cut(s)	79, 571, 635, 1525, 1660
Bso31I	GGTCTC	3 cut(s)	21, 491, 1456
BsoBI	CYCGRG	1 cut(s)	1471
Bsp1286I	GDGCHC	2 cut(s)	399, 1897
Bsp13I	TCCGGA	2 cut(s)	19, 388
Bsp1407I	TGTACA	1 cut(s)	423
Bsp143I	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
Bsp1720I	GCTNAGC	1 cut(s)	1810
BspACI	CCGC	4 cut(s)	527, 1476, 1574, 2001
BspANI	GGCC	5 cut(s)	79, 571, 635, 1525, 1660
BspCNI	CTCAG	7 cut(s)	445, 460, 1012, 1033, 1282, 1816, 1823
BspEI	TCCGGA	2 cut(s)	19, 388
BspLI	GGNNCC	3 cut(s)	1317, 1504, 1748
BspMAI	CTGCAG	3 cut(s)	988, 1636, 1902
BspMI	ACCTGC	2 cut(s)	196, 1762
BspPI	GGATC	4 cut(s)	549, 1168, 1259, 1504
BspQI	GCTCTTC	1 cut(s)	1009
BspT107I	GGYRCC	1 cut(s)	1502
BspTNI	GGTCTC	3 cut(s)	21, 491, 1456
BsrDI	GCAATG	2 cut(s)	1245, 1764
BsrGI	TGTACA	1 cut(s)	423
BsrI	ACTGG	8 cut(s)	279, 354, 502, 893, 1193, 1256, 1417, 1526
BssECI	CCNNGG	2 cut(s)	1447, 1493
BssMI	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
BssSI	CACGAG	1 cut(s)	1514
BssT1I	CCWWGG	1 cut(s)	1493
Bst2BI	CACGAG	1 cut(s)	1514
Bst2UI	CCWGG	3 cut(s)	26, 1449, 1793
Bst6I	CTCTTC	4 cut(s)	853, 1009, 1572, 1780
BstAUI	TGTACA	1 cut(s)	423
BstC8I	GCNNGC	1 cut(s)	1320
BstDEI	CTNAG	8 cut(s)	453, 468, 1020, 1041, 1269, 1810, 1824, 2036
BstEII	GGTNACC	1 cut(s)	1199
BstF5I	GGATG	6 cut(s)	279, 397, 523, 1117, 1300, 1696
BstKTI	GATC	9 cut(s)	544, 991, 1163, 1209, 1267, 1489, 1512, 1554, 1876
BstMAI	GTCTC	8 cut(s)	21, 491, 850, 1007, 1456, 1644, 1904, 1921
BstMBI	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
BstMWI	GCNNNNNNNGC	9 cut(s)	290, 314, 329, 458, 613, 1580, 1602, 1631, 1820
BstNI	CCWGG	3 cut(s)	26, 1449, 1793
BstNSI	RCATGY	1 cut(s)	353
BstPI	GGTNACC	1 cut(s)	1199
BstSCI	CCNGG	3 cut(s)	24, 1447, 1791
BstSFI	CTRYAG	3 cut(s)	984, 1632, 1898
BstSLI	GKGCMC	1 cut(s)	1897
BstV1I	GCAGC	6 cut(s)	619, 796, 970, 1087, 1239, 1612
BstV2I	GAAGAC	1 cut(s)	1677
BstX2I	RGATCY	2 cut(s)	1160, 1264
BstYI	RGATCY	2 cut(s)	1160, 1264
BsuI	GTATCC	1 cut(s)	1030
BsuRI	GGCC	5 cut(s)	79, 571, 635, 1525, 1660
BtgZI	GCGATG	1 cut(s)	1965
BtrI	CACGTC	1 cut(s)	1727
BtsCI	GGATG	6 cut(s)	279, 397, 523, 1117, 1300, 1696
BtsI	GCAGTG	3 cut(s)	129, 1895, 1907
BveI	ACCTGC	2 cut(s)	196, 1762
Cac8I	GCNNGC	1 cut(s)	1320
CaiI	CAGNNNCTG	3 cut(s)	467, 1544, 1823
Cfr13I	GGNCC	3 cut(s)	22, 634, 1747
Csp6I	GTAC	3 cut(s)	424, 656, 1080
CviAII	CATG	9 cut(s)	290, 350, 400, 530, 992, 1323, 1598, 1646, 2017
CviQI	GTAC	3 cut(s)	424, 656, 1080
DdeI	CTNAG	8 cut(s)	453, 468, 1020, 1041, 1269, 1810, 1824, 2036
DpnI	GATC	9 cut(s)	543, 990, 1162, 1208, 1266, 1488, 1511, 1553, 1875
DpnII	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
DrdI	GACNNNNNNGTC	2 cut(s)	52, 1918
DseDI	GACNNNNNNGTC	2 cut(s)	52, 1918
Eam1104I	CTCTTC	4 cut(s)	853, 1009, 1572, 1780
EarI	CTCTTC	4 cut(s)	853, 1009, 1572, 1780
EciI	GGCGGA	1 cut(s)	1491
Eco130I	CCWWGG	1 cut(s)	1493
Eco147I	AGGCCT	2 cut(s)	79, 571
Eco24I	GRGCYC	1 cut(s)	399
Eco31I	GGTCTC	3 cut(s)	21, 491, 1456
Eco47I	GGWCC	2 cut(s)	22, 1747
Eco57I	CTGAAG	2 cut(s)	1671, 1800
Eco88I	CYCGRG	1 cut(s)	1471
Eco91I	GGTNACC	1 cut(s)	1199
EcoO109I	RGGNCCY	1 cut(s)	634
EcoO65I	GGTNACC	1 cut(s)	1199
EcoRI	GAATTC	1 cut(s)	1638
EcoRII	CCWGG	3 cut(s)	24, 1447, 1791
EcoT14I	CCWWGG	1 cut(s)	1493
EcoT38I	GRGCYC	1 cut(s)	399
ErhI	CCWWGG	1 cut(s)	1493
Esp3I	CGTCTC	1 cut(s)	1007
FaeI	CATG	9 cut(s)	293, 353, 403, 533, 995, 1326, 1601, 1649, 2020
FaqI	GGGAC	4 cut(s)	58, 1737, 1760, 2017
FatI	CATG	9 cut(s)	289, 349, 399, 529, 991, 1322, 1597, 1645, 2016
FauI	CCCGC	1 cut(s)	1994
FbaI	TGATCA	2 cut(s)	1486, 1551
FblI	GTMKAC	2 cut(s)	56, 114
Fnu4HI	GCNGC	6 cut(s)	608, 810, 984, 1076, 1228, 1626
FokI	GGATG	6 cut(s)	286, 404, 510, 1124, 1287, 1683
FriOI	GRGCYC	1 cut(s)	399
Fsp4HI	GCNGC	6 cut(s)	608, 810, 984, 1076, 1228, 1626
FspBI	CTAG	7 cut(s)	242, 519, 722, 1151, 1401, 1923, 1946
GluI	GCNGC	6 cut(s)	608, 810, 984, 1076, 1228, 1626
GsaI	CCCAGC	2 cut(s)	1312, 1470
GsuI	CTGGAG	4 cut(s)	403, 1239, 1334, 1775
HaeIII	GGCC	5 cut(s)	79, 571, 635, 1525, 1660
HapII	CCGG	2 cut(s)	20, 389
Hin1II	CATG	9 cut(s)	293, 353, 403, 533, 995, 1326, 1601, 1649, 2020
HindIII	AAGCTT	2 cut(s)	670, 872
HinfI	GANTC	9 cut(s)	29, 126, 155, 385, 728, 1115, 1130, 1181, 1880
HpaII	CCGG	2 cut(s)	20, 389
HphI	GGTGA	6 cut(s)	611, 641, 1057, 1436, 1481, 1544
Hpy166II	GTNNAC	2 cut(s)	57, 115
Hpy188I	TCNGA	8 cut(s)	653, 696, 1135, 1272, 1356, 1461, 1819, 1981
Hpy188III	TCNNGA	9 cut(s)	20, 382, 389, 551, 666, 1109, 1516, 1736, 1877
Hpy8I	GTNNAC	2 cut(s)	57, 115
HpyAV	CCTTC	8 cut(s)	239, 621, 752, 937, 1314, 1775, 1883, 2034
HpyCH4IV	ACGT	1 cut(s)	1726
HpyF10VI	GCNNNNNNNGC	9 cut(s)	290, 314, 329, 458, 613, 1580, 1602, 1631, 1820
HpyF3I	CTNAG	8 cut(s)	453, 468, 1020, 1041, 1269, 1810, 1824, 2036
HpySE526I	ACGT	1 cut(s)	1726
Hsp92II	CATG	9 cut(s)	293, 353, 403, 533, 995, 1326, 1601, 1649, 2020
Kpn2I	TCCGGA	2 cut(s)	19, 388
Ksp22I	TGATCA	2 cut(s)	1486, 1551
Kzo9I	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
LguI	GCTCTTC	1 cut(s)	1009
LmnI	GCTCC	1 cut(s)	1315
Lsp1109I	GCAGC	6 cut(s)	619, 796, 970, 1087, 1239, 1612
LweI	GCATC	5 cut(s)	264, 1259, 1436, 1810, 1942
MaeI	CTAG	7 cut(s)	242, 519, 722, 1151, 1401, 1923, 1946
MaeII	ACGT	1 cut(s)	1726
MaeIII	GTNAC	3 cut(s)	119, 1199, 1516
MalI	GATC	9 cut(s)	543, 990, 1162, 1208, 1266, 1488, 1511, 1553, 1875
MboI	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
MboII	GAAGA	9 cut(s)	350, 710, 840, 1026, 1274, 1589, 1677, 1751, 1767
MfeI	CAATTG	1 cut(s)	852
MflI	RGATCY	2 cut(s)	1160, 1264
MhlI	GDGCHC	2 cut(s)	399, 1897
MlyI	GAGTC	3 cut(s)	120, 394, 1139
MmeI	TCCRAC	2 cut(s)	756, 1155
MroI	TCCGGA	2 cut(s)	19, 388
MseI	TTAA	8 cut(s)	179, 195, 360, 437, 566, 1142, 1967, 2058
MslI	CAYNNNNRTG	3 cut(s)	354, 528, 1900
MspA1I	CMGCKG	1 cut(s)	1312
MspI	CCGG	2 cut(s)	20, 389
MspR9I	CCNGG	3 cut(s)	26, 1449, 1793
MunI	CAATTG	1 cut(s)	852
Mva1269I	GAATGC	2 cut(s)	377, 463
MvaI	CCWGG	3 cut(s)	26, 1449, 1793
MwoI	GCNNNNNNNGC	9 cut(s)	290, 314, 329, 458, 613, 1580, 1602, 1631, 1820
NdeII	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
NlaIII	CATG	9 cut(s)	293, 353, 403, 533, 995, 1326, 1601, 1649, 2020
NlaIV	GGNNCC	3 cut(s)	1317, 1504, 1748
NmuCI	GTSAC	2 cut(s)	119, 1516
NspI	RCATGY	1 cut(s)	353
OliI	CACNNNNGTG	1 cut(s)	1900
PceI	AGGCCT	2 cut(s)	79, 571
PciSI	GCTCTTC	1 cut(s)	1009
PctI	GAATGC	2 cut(s)	377, 463
PfeI	GAWTC	6 cut(s)	29, 155, 728, 1115, 1181, 1880
Pfl23II	CGTACG	1 cut(s)	1079
PfoI	TCCNGGA	1 cut(s)	1791
PkrI	GCNGC	6 cut(s)	609, 811, 985, 1077, 1229, 1627
PleI	GAGTC	3 cut(s)	120, 393, 1138
PpsI	GAGTC	3 cut(s)	120, 393, 1138
PshBI	ATTAAT	1 cut(s)	2058
Psp6I	CCWGG	3 cut(s)	24, 1447, 1791
PspEI	GGTNACC	1 cut(s)	1199
PspFI	CCCAGC	2 cut(s)	1308, 1466
PspGI	CCWGG	3 cut(s)	24, 1447, 1791
PspLI	CGTACG	1 cut(s)	1079
PspN4I	GGNNCC	3 cut(s)	1317, 1504, 1748
PspPI	GGNCC	3 cut(s)	22, 634, 1747
PstI	CTGCAG	3 cut(s)	988, 1636, 1902
PstNI	CAGNNNCTG	3 cut(s)	467, 1544, 1823
PsuI	RGATCY	2 cut(s)	1160, 1264
PvuII	CAGCTG	1 cut(s)	1312
RsaI	GTAC	3 cut(s)	425, 657, 1081
RsaNI	GTAC	3 cut(s)	424, 656, 1080
RseI	CAYNNNNRTG	3 cut(s)	354, 528, 1900
SapI	GCTCTTC	1 cut(s)	1009
SaqAI	TTAA	8 cut(s)	179, 195, 360, 437, 566, 1142, 1967, 2058
SatI	GCNGC	6 cut(s)	608, 810, 984, 1076, 1228, 1626
Sau3AI	GATC	9 cut(s)	541, 988, 1160, 1206, 1264, 1486, 1509, 1551, 1873
Sau96I	GGNCC	3 cut(s)	22, 634, 1747
ScaI	AGTACT	1 cut(s)	657
SchI	GAGTC	3 cut(s)	120, 394, 1139
ScrFI	CCNGG	3 cut(s)	26, 1449, 1793
SduI	GDGCHC	2 cut(s)	399, 1897
SfaNI	GCATC	5 cut(s)	264, 1259, 1436, 1810, 1942
SfcI	CTRYAG	3 cut(s)	984, 1632, 1898
SinI	GGWCC	2 cut(s)	22, 1747
SmiMI	CAYNNNNRTG	3 cut(s)	354, 528, 1900
SmlI	CTYRAG	2 cut(s)	551, 673
SmoI	CTYRAG	2 cut(s)	551, 673
SseBI	AGGCCT	2 cut(s)	79, 571
SsiI	CCGC	4 cut(s)	527, 1476, 1574, 2001
SspI	AATATT	2 cut(s)	1371, 2056
SspMI	CTAG	7 cut(s)	242, 519, 722, 1151, 1401, 1923, 1946
StuI	AGGCCT	2 cut(s)	79, 571
StyD4I	CCNGG	3 cut(s)	24, 1447, 1791
StyI	CCWWGG	1 cut(s)	1493
TaiI	ACGT	1 cut(s)	1729
TaqI	TCGA	2 cut(s)	1508, 1642
TaqII	GACCGA	1 cut(s)	1764
TatI	WGTACW	2 cut(s)	423, 655
TfiI	GAWTC	6 cut(s)	29, 155, 728, 1115, 1181, 1880
Tru1I	TTAA	8 cut(s)	179, 195, 360, 437, 566, 1142, 1967, 2058
Tru9I	TTAA	8 cut(s)	179, 195, 360, 437, 566, 1142, 1967, 2058
TseFI	GTSAC	2 cut(s)	119, 1516
TseI	GCWGC	6 cut(s)	607, 809, 983, 1075, 1227, 1625
Tsp45I	GTSAC	2 cut(s)	119, 1516
VpaK11BI	GGWCC	2 cut(s)	22, 1747
VspI	ATTAAT	1 cut(s)	2058
XapI	RAATTY	3 cut(s)	95, 440, 1638
XceI	RCATGY	1 cut(s)	353
XmiI	GTMKAC	2 cut(s)	56, 114
XspI	CTAG	7 cut(s)	242, 519, 722, 1151, 1401, 1923, 1946
ZrmI	AGTACT	1 cut(s)	657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.