Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0010054

Physical Location & Seq

Genomic Coordinates Reverse (-)

1094748 .. 1098285

Gene Structure 3538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g01310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGAAGGTGTGTCCCCAGACCAGGAATCAGTTGGGTCTGGAACAAAGAGGTCTACTGCATCATCTGGCAGTAGGTCTCGTAACTGCAAGGAGTTTCTTCATAGATTTGTAGACAGTGGCATGCTTACTGCACAACTGGAAGACTGGTTTGAATCTATATCCAGTGAATCAGAACCAAAGAAACCGGCCTTTGATGTGCCTTTTGAGATGATAGAACTTCAAAAGTTTGACTATGCATTGGAAGGGATTTCATTTCAGCAGGTGATTAGGATGCCCAATTCCGTTTACACTTCAACATCTGATGCTGTTGAAGCAACTGCTTATCTTGCCCTTGAAGATTTTTTACATGCTGGTGCAAAGGGATTGTGGGAAGCATTCTGGAATCAGGATGGACCCATGCCTTTTTCTGTTGCTTGTCTATACAATGAAAACTTAAAATTCTACCAGGCTGAGAAGGCAGTTGCGGATGGTAAGCTTGGAGGTCTTTGTGCTACTGGTTTATTGCTTACAAACCCTAGACATCCCCGTGGGAGGTGGGATCATATTCTTGAACTGTCTCTTTTAAGGCCTGATATCAGAAACTTTTCCATGGATAGTGACAGGCAGCTTTCTCTATCTGTTTTAGGCGAGGCCCTTTTCTATGCTATCCGTGTACTATTATCAAGAAGCTTGAGCAGAATGAACTACTCTCAGAGTTCAAACTCTGTGTTTATTCTTCTTGTTGATTCTCAGTATGGTGGGGTAGTAAAGGTTGAAGGAGATGTAAATAAGATGGTGTTTGATGCCAATAATGTTTACGAATGTGCTGCTGAATGGATTACAAATCATTCTAGGATTGCAGTCTCGTCGATTGATAGGATCTGGAACAAGGTTGGAAATGCCAACTGGGGAGACGTTGGTGCCTTACAGGTACTTTTTGCTACCTTCCATTGTATCGTGCAATTTGCTGGATTTCCCAAGCACTCGATAGAGGATTTAGCTGCTGATCATGGTCCTCGCCTCCAAGCAAGAAGGACTGAGAGGCAGTTGGGGAATTCCCGGGCGAATGGAAATGGTCTATATCGGTTCCAGCAGCGCAGTGTATCCCCTGAAATCGTTGAAGTTCACGATGATTCTGCTAAAATTGAGGCCGAACAGTTAATGAAGCTAGAAGTAGGATCTGTATTATGGTTGGAGGATTCTAACTGGCAAAAGGGTTACCATATCAGTCAACTCTTGTATAATAATGAACATCCATATTACATTGCATCTCCCGTTGAAGAACCTCAGAGAAGTTTCTTTCTATATGTTGGTTCTCATCCTTCCCAGCTGGAGCCCGCGTGGGAGGATATGAATCTGTGGTATCAAGTTCAGAGGCAGATGAAAATATTGACTATTATGAAACGGAAAGGTCTATCTAGCAAGTATCTACCTCAGTTAAGTGCTTCTGGCAGGATTATTCACCCTGGTCAGTGTCAGAAACCCAGCTCGGGTGGAAACTGTGATCACCCCTGGTGTGGCACTCCGATTCTTGTGACCAGCCCAGTTGGTGAAACAGTGGCTCATATGATAAGCGAGGCCAGATTTGGTATGGAGGACACGATCAGGTGTTGCCATGATTGCTTATCTGCACTTTCAACTGCCGCTTCTGCAGGAATTCGCCATGGAGACATCAGGCCTGAGAATGTGATTTGTGTCAGGTCTGCCGAGAAGCAACCTTATTTTGTTCTTATTGGTTGGGGACGTGCTATTCTTGACGATAGGGACCGCCCTGCAATGAACCTTCATTTCTCTTCAACTTATGCTCTCCAGGAGGGAAAGCTATGCTCAGCTTCAGATGCAGAGAGCCTTGTTTACATGCTTTATATTTCCTGTGGTGGGGTTTTACCTGATCTTGATTCGGTTGAGGGGGCACTGCAGTGGAGAGAGACTTCGTGGTCCAGGAGATTAATTCAGCAGAAGTTAGGTGAGGCCTCAACTGTGTTGAAAGCATTTGCCGATTATGTTGATAGTCTATGTGGGACACCATATCCCATGGACCATGATATATGGCTAAGAAGGTTGAGGAGAAACATTAATGAGGATGATTCTGGGAAGGAAATTGATACATCGGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

699

Amino Acids

78.22

Weight (kDa)

5.57

Isoelectric Point (pI)

52.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010054)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40980
fragaria_vesca	FvH4_1g29580 FvH4_1g29580
malus_domestica	MD12G1015800.v1.1 MD14G1013800.v1.1
prunus_persica	Prupe.7G024700_v2.0.a1 Prupe.7G024700_v2.0.a1 Prupe.7G024700_v2.0.a1
pyrus_communis	pycom12g01310 pycom14g01170
rosa_chinensis	RchiOBHm_Chr3g0495221
rosa_laevigata	RLG00000022636
rosa_multiflora	Rmu_sc0000814.1_g000009
rosa_roxburghii	Rroxscaffold_6G00390670
rosa_rugosa	Rorug03G0270900 Rorug03G0271000
rosa_samantha	Rh3AG319800 Rh3BG354900 Rh3CG351800 Rh3DG353900
rosa_wichuraiana	Rw3G027940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	250
AasI	GACNNNNNNGTC	1 cut(s)	1915
Acc36I	ACCTGC	1 cut(s)	250
AccB1I	GGYRCC	1 cut(s)	899
AccI	GTMKAC	2 cut(s)	53, 111
AccII	CGCG	1 cut(s)	1319
AciI	CCGC	4 cut(s)	464, 1317, 1623, 1747
AclWI	GGATC	3 cut(s)	546, 866, 1165
AcsI	RAATTY	3 cut(s)	437, 1033, 1635
AcuI	CTGAAG	1 cut(s)	1797
AfaI	GTAC	2 cut(s)	654, 912
AfiI	CCNNNNNNNGG	5 cut(s)	22, 531, 1469, 1496, 1857
AjiI	CACGTC	1 cut(s)	1724
AjnI	CCWGG	6 cut(s)	21, 444, 1444, 1490, 1788, 1919
AleI	CACNNNNGTG	1 cut(s)	1897
AluBI	AGCT	9 cut(s)	475, 607, 669, 980, 1147, 1309, 1467, 1801, 1811
AluI	AGCT	9 cut(s)	475, 607, 669, 980, 1147, 1309, 1467, 1801, 1811
Alw26I	GTCTC	6 cut(s)	81, 561, 847, 885, 1641, 1901
AlwI	GGATC	3 cut(s)	546, 866, 1165
Ama87I	CYCGRG	2 cut(s)	1038, 1468
AoxI	GGCC	7 cut(s)	186, 566, 630, 1128, 1557, 1655, 1950
ApeKI	GCWGC	4 cut(s)	604, 806, 980, 1072
ApoI	RAATTY	3 cut(s)	437, 1033, 1635
AseI	ATTAAT	2 cut(s)	1928, 2055
Asp700I	GAANNNNTTC	1 cut(s)	583
AspLEI	GCGC	1 cut(s)	1077
AspS9I	GGNCC	6 cut(s)	392, 631, 992, 1744, 1917, 2017
AsuC2I	CCSGG	2 cut(s)	1039, 1040
AsuHPI	GGTGA	5 cut(s)	274, 1433, 1478, 1541, 1958
AvaI	CYCGRG	2 cut(s)	1038, 1468
AvaII	GGWCC	5 cut(s)	392, 992, 1744, 1917, 2017
BaeGI	GKGCMC	1 cut(s)	1894
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	1 cut(s)	1317
BarI	GAAGNNNNNNTAC	2 cut(s)	327, 359
BbsI	GAAGAC	1 cut(s)	147
BbvI	GCAGC	4 cut(s)	616, 793, 967, 1084
BccI	CCATC	3 cut(s)	383, 461, 766
BcgI	CGANNNNNNTGC	6 cut(s)	788, 822, 828, 862, 1097, 1131
BciT130I	CCWGG	6 cut(s)	23, 446, 1446, 1492, 1790, 1921
BciVI	GTATCC	1 cut(s)	1093
BclI	TGATCA	2 cut(s)	985, 1483
BcnI	CCSGG	2 cut(s)	1039, 1040
BcoDI	GTCTC	6 cut(s)	81, 561, 847, 885, 1641, 1901
BfaI	CTAG	4 cut(s)	516, 831, 1148, 1398
BfmI	CTRYAG	2 cut(s)	1629, 1895
BfuAI	ACCTGC	1 cut(s)	250
BfuI	GTATCC	1 cut(s)	1093
BisI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
BlpI	GCTNAGC	1 cut(s)	1807
BlsI	GCNGC	5 cut(s)	606, 808, 982, 1074, 1624
Bme1390I	CCNGG	8 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790, 1921
Bme18I	GGWCC	5 cut(s)	392, 992, 1744, 1917, 2017
BmeT110I	CYCGRG	2 cut(s)	1038, 1468
BmgBI	CACGTC	1 cut(s)	1724
BmgT120I	GGNCC	6 cut(s)	392, 631, 992, 1744, 1917, 2017
BmiI	GGNNCC	5 cut(s)	394, 901, 1067, 1314, 1745
BmrFI	CCNGG	8 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790, 1921
BmrI	ACTGGG	2 cut(s)	895, 1517
BmsI	GCATC	6 cut(s)	68, 261, 292, 772, 1256, 1807
BmuI	ACTGGG	2 cut(s)	895, 1517
BpiI	GAAGAC	1 cut(s)	147
BpmI	CTGGAG	2 cut(s)	1331, 1772
Bpu1102I	GCTNAGC	1 cut(s)	1807
BpuEI	CTTGAG	1 cut(s)	691
BpuMI	CCSGG	2 cut(s)	1039, 1040
BsaBI	GATNNNNATC	1 cut(s)	1332
BsaI	GGTCTC	1 cut(s)	81
BsaJI	CCNNGG	7 cut(s)	526, 588, 1038, 1444, 1490, 1642, 2013
BsaXI	ACNNNNNCTCC	2 cut(s)	1304, 1334
Bsc4I	CCNNNNNNNGG	5 cut(s)	22, 531, 1469, 1496, 1857
Bse118I	RCCGGY	1 cut(s)	184
Bse1I	ACTGG	7 cut(s)	141, 149, 162, 499, 890, 1190, 1523
Bse3DI	GCAATG	2 cut(s)	1242, 1761
Bse8I	GATNNNNATC	1 cut(s)	1332
BseBI	CCWGG	6 cut(s)	23, 446, 1446, 1492, 1790, 1921
BseDI	CCNNGG	7 cut(s)	526, 588, 1038, 1444, 1490, 1642, 2013
BseGI	GGATG	7 cut(s)	276, 394, 472, 520, 1231, 1297, 2068
BseJI	GATNNNNATC	1 cut(s)	1332
BseLI	CCNNNNNNNGG	5 cut(s)	22, 531, 1469, 1496, 1857
BseMI	GCAATG	2 cut(s)	1242, 1761
BseMII	CTCAG	8 cut(s)	441, 704, 743, 1008, 1280, 1427, 1650, 1821
BseNI	ACTGG	7 cut(s)	141, 149, 162, 499, 890, 1190, 1523
BseRI	GAGGAG	1 cut(s)	2059
BseSI	GKGCMC	1 cut(s)	1894
BseXI	GCAGC	4 cut(s)	616, 793, 967, 1084
BseYI	CCCAGC	2 cut(s)	1305, 1463
BsgI	GTGCAG	2 cut(s)	114, 1593
Bsh1236I	CGCG	1 cut(s)	1319
BshFI	GGCC	7 cut(s)	188, 568, 632, 1130, 1559, 1657, 1952
BshNI	GGYRCC	1 cut(s)	899
BsiHKCI	CYCGRG	2 cut(s)	1038, 1468
BsiSI	CCGG	2 cut(s)	185, 1039
BslFI	GGGAC	3 cut(s)	1734, 1757, 2014
BslI	CCNNNNNNNGG	5 cut(s)	22, 531, 1469, 1496, 1857
BsmAI	GTCTC	6 cut(s)	81, 561, 847, 885, 1641, 1901
BsmBI	CGTCTC	1 cut(s)	885
BsmFI	GGGAC	3 cut(s)	1734, 1757, 2014
BsmI	GAATGC	1 cut(s)	374
BsnI	GGCC	7 cut(s)	188, 568, 632, 1130, 1559, 1657, 1952
Bso31I	GGTCTC	1 cut(s)	81
BsoBI	CYCGRG	2 cut(s)	1038, 1468
Bsp1286I	GDGCHC	2 cut(s)	1317, 1894
Bsp143I	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
Bsp1720I	GCTNAGC	1 cut(s)	1807
Bsp19I	CCATGG	3 cut(s)	588, 1642, 2013
BspACI	CCGC	4 cut(s)	464, 1317, 1623, 1747
BspANI	GGCC	7 cut(s)	188, 568, 632, 1130, 1559, 1657, 1952
BspCNI	CTCAG	8 cut(s)	442, 703, 742, 1009, 1279, 1426, 1651, 1820
BspFNI	CGCG	1 cut(s)	1319
BspLI	GGNNCC	5 cut(s)	394, 901, 1067, 1314, 1745
BspMAI	CTGCAG	2 cut(s)	1633, 1899
BspMI	ACCTGC	1 cut(s)	250
BspPI	GGATC	3 cut(s)	546, 866, 1165
BspT107I	GGYRCC	1 cut(s)	899
BspTNI	GGTCTC	1 cut(s)	81
BsrDI	GCAATG	2 cut(s)	1242, 1761
BsrFI	RCCGGY	1 cut(s)	184
BsrI	ACTGG	7 cut(s)	141, 149, 162, 499, 890, 1190, 1523
BssAI	RCCGGY	1 cut(s)	184
BssECI	CCNNGG	7 cut(s)	526, 588, 1038, 1444, 1490, 1642, 2013
BssMI	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
BssT1I	CCWWGG	3 cut(s)	588, 1642, 2013
Bst2UI	CCWGG	6 cut(s)	23, 446, 1446, 1492, 1790, 1921
Bst4CI	ACNGT	6 cut(s)	116, 555, 1137, 1481, 1537, 1960
Bst6I	CTCTTC	1 cut(s)	1777
BstC8I	GCNNGC	2 cut(s)	122, 1317
BstDEI	CTNAG	9 cut(s)	450, 690, 729, 1017, 1266, 1413, 1659, 1807, 2033
BstDSI	CCRYGG	4 cut(s)	526, 588, 1642, 2013
BstEII	GGTNACC	1 cut(s)	1196
BstF5I	GGATG	7 cut(s)	276, 394, 472, 520, 1231, 1297, 2068
BstFNI	CGCG	1 cut(s)	1319
BstHHI	GCGC	1 cut(s)	1077
BstKTI	GATC	7 cut(s)	541, 861, 988, 1160, 1486, 1584, 1873
BstMAI	GTCTC	6 cut(s)	81, 561, 847, 885, 1641, 1901
BstMBI	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
BstMWI	GCNNNNNNNGC	6 cut(s)	311, 326, 455, 1599, 1628, 1817
BstNI	CCWGG	6 cut(s)	23, 446, 1446, 1492, 1790, 1921
BstNSI	RCATGY	3 cut(s)	124, 350, 1840
BstPI	GGTNACC	1 cut(s)	1196
BstSCI	CCNGG	8 cut(s)	21, 444, 1037, 1038, 1444, 1490, 1788, 1919
BstSFI	CTRYAG	2 cut(s)	1629, 1895
BstSLI	GKGCMC	1 cut(s)	1894
BstUI	CGCG	1 cut(s)	1319
BstV1I	GCAGC	4 cut(s)	616, 793, 967, 1084
BstV2I	GAAGAC	1 cut(s)	147
BstX2I	RGATCY	2 cut(s)	858, 1157
BstYI	RGATCY	2 cut(s)	858, 1157
BsuI	GTATCC	1 cut(s)	1093
BsuRI	GGCC	7 cut(s)	188, 568, 632, 1130, 1559, 1657, 1952
BtgI	CCRYGG	4 cut(s)	526, 588, 1642, 2013
BtrI	CACGTC	1 cut(s)	1724
BtsCI	GGATG	7 cut(s)	276, 394, 472, 520, 1231, 1297, 2068
BtsI	GCAGTG	3 cut(s)	1084, 1892, 1904
BtsIMutI	CAGTG	7 cut(s)	121, 169, 1084, 1457, 1542, 1892, 1904
BveI	ACCTGC	1 cut(s)	250
Cac8I	GCNNGC	2 cut(s)	122, 1317
CfoI	GCGC	1 cut(s)	1077
Cfr10I	RCCGGY	1 cut(s)	184
Cfr13I	GGNCC	6 cut(s)	392, 631, 992, 1744, 1917, 2017
Cfr9I	CCCGGG	1 cut(s)	1038
Csp6I	GTAC	2 cut(s)	653, 911
CviQI	GTAC	2 cut(s)	653, 911
DdeI	CTNAG	9 cut(s)	450, 690, 729, 1017, 1266, 1413, 1659, 1807, 2033
DpnI	GATC	7 cut(s)	540, 860, 987, 1159, 1485, 1583, 1872
DpnII	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
DrdI	GACNNNNNNGTC	1 cut(s)	1915
DseDI	GACNNNNNNGTC	1 cut(s)	1915
Eam1104I	CTCTTC	1 cut(s)	1777
EarI	CTCTTC	1 cut(s)	1777
Eco130I	CCWWGG	3 cut(s)	588, 1642, 2013
Eco147I	AGGCCT	3 cut(s)	568, 1657, 1952
Eco24I	GRGCYC	1 cut(s)	1317
Eco31I	GGTCTC	1 cut(s)	81
Eco32I	GATATC	1 cut(s)	574
Eco47I	GGWCC	5 cut(s)	392, 992, 1744, 1917, 2017
Eco57I	CTGAAG	1 cut(s)	1797
Eco88I	CYCGRG	2 cut(s)	1038, 1468
Eco91I	GGTNACC	1 cut(s)	1196
EcoO109I	RGGNCCY	1 cut(s)	631
EcoO65I	GGTNACC	1 cut(s)	1196
EcoRI	GAATTC	2 cut(s)	1033, 1635
EcoRII	CCWGG	6 cut(s)	21, 444, 1444, 1490, 1788, 1919
EcoRV	GATATC	1 cut(s)	574
EcoT14I	CCWWGG	3 cut(s)	588, 1642, 2013
EcoT22I	ATGCAT	1 cut(s)	238
EcoT38I	GRGCYC	1 cut(s)	1317
ErhI	CCWWGG	3 cut(s)	588, 1642, 2013
Esp3I	CGTCTC	1 cut(s)	885
FaqI	GGGAC	3 cut(s)	1734, 1757, 2014
FauI	CCCGC	1 cut(s)	1324
FauNDI	CATATG	1 cut(s)	1545
FbaI	TGATCA	2 cut(s)	985, 1483
FblI	GTMKAC	2 cut(s)	53, 111
Fnu4HI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
FokI	GGATG	7 cut(s)	283, 401, 479, 507, 1218, 1284, 2075
FriOI	GRGCYC	1 cut(s)	1317
Fsp4HI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
FspBI	CTAG	4 cut(s)	516, 831, 1148, 1398
GlaI	GCGC	1 cut(s)	1076
GluI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
GsaI	CCCAGC	2 cut(s)	1309, 1467
GsuI	CTGGAG	2 cut(s)	1331, 1772
HaeIII	GGCC	7 cut(s)	188, 568, 632, 1130, 1559, 1657, 1952
HapII	CCGG	2 cut(s)	185, 1039
HhaI	GCGC	1 cut(s)	1077
Hin6I	GCGC	1 cut(s)	1075
HinP1I	GCGC	1 cut(s)	1075
HincII	GTYRAC	1 cut(s)	1211
HindII	GTYRAC	1 cut(s)	1211
HindIII	AAGCTT	2 cut(s)	473, 667
HpaII	CCGG	2 cut(s)	185, 1039
HphI	GGTGA	5 cut(s)	274, 1433, 1478, 1541, 1958
Hpy166II	GTNNAC	8 cut(s)	54, 112, 286, 653, 796, 1105, 1211, 1834
Hpy188I	TCNGA	9 cut(s)	172, 301, 578, 693, 1269, 1353, 1458, 1506, 1816
Hpy188III	TCNNGA	9 cut(s)	39, 379, 386, 548, 663, 862, 1106, 1733, 1874
Hpy8I	GTNNAC	8 cut(s)	54, 112, 286, 653, 796, 1105, 1211, 1834
Hpy99I	CGWCG	1 cut(s)	850
HpyAV	CCTTC	9 cut(s)	236, 448, 749, 934, 1005, 1311, 1772, 2031, 2068
HpyCH4III	ACNGT	6 cut(s)	116, 555, 1137, 1481, 1537, 1960
HpyCH4IV	ACGT	2 cut(s)	894, 1723
HpyF10VI	GCNNNNNNNGC	6 cut(s)	311, 326, 455, 1599, 1628, 1817
HpyF3I	CTNAG	9 cut(s)	450, 690, 729, 1017, 1266, 1413, 1659, 1807, 2033
HpySE526I	ACGT	2 cut(s)	894, 1723
HspAI	GCGC	1 cut(s)	1075
Ksp22I	TGATCA	2 cut(s)	985, 1483
Kzo9I	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
LmnI	GCTCC	1 cut(s)	1312
Lsp1109I	GCAGC	4 cut(s)	616, 793, 967, 1084
LweI	GCATC	6 cut(s)	68, 261, 292, 772, 1256, 1807
MaeI	CTAG	4 cut(s)	516, 831, 1148, 1398
MaeII	ACGT	2 cut(s)	894, 1723
MaeIII	GTNAC	4 cut(s)	80, 596, 1196, 1513
MalI	GATC	7 cut(s)	540, 860, 987, 1159, 1485, 1583, 1872
MboI	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
MboII	GAAGA	6 cut(s)	89, 152, 347, 707, 1271, 1764
MflI	RGATCY	2 cut(s)	858, 1157
MhlI	GDGCHC	2 cut(s)	1317, 1894
MluCI	AATT	8 cut(s)	277, 437, 941, 1033, 1122, 1635, 1929, 2079
MmeI	TCCRAC	2 cut(s)	853, 1152
Mph1103I	ATGCAT	1 cut(s)	238
MroXI	GAANNNNTTC	1 cut(s)	583
MseI	TTAA	6 cut(s)	434, 563, 1139, 1418, 1928, 2055
MslI	CAYNNNNRTG	3 cut(s)	351, 525, 1897
MspA1I	CMGCKG	1 cut(s)	1309
MspI	CCGG	2 cut(s)	185, 1039
MspR9I	CCNGG	8 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790, 1921
Mva1269I	GAATGC	1 cut(s)	374
MvaI	CCWGG	6 cut(s)	23, 446, 1446, 1492, 1790, 1921
MvnI	CGCG	1 cut(s)	1319
MwoI	GCNNNNNNNGC	6 cut(s)	311, 326, 455, 1599, 1628, 1817
NciI	CCSGG	2 cut(s)	1039, 1040
NcoI	CCATGG	3 cut(s)	588, 1642, 2013
NdeI	CATATG	1 cut(s)	1545
NdeII	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
NlaIV	GGNNCC	5 cut(s)	394, 901, 1067, 1314, 1745
NmeAIII	GCCGAG	1 cut(s)	1711
NmuCI	GTSAC	2 cut(s)	596, 1513
NsiI	ATGCAT	1 cut(s)	238
NspI	RCATGY	3 cut(s)	124, 350, 1840
OliI	CACNNNNGTG	1 cut(s)	1897
PaeI	GCATGC	1 cut(s)	124
PaqCI	CACCTGC	1 cut(s)	250
PceI	AGGCCT	3 cut(s)	568, 1657, 1952
PctI	GAATGC	1 cut(s)	374
PdmI	GAANNNNTTC	1 cut(s)	583
PfoI	TCCNGGA	2 cut(s)	1788, 1919
PkrI	GCNGC	5 cut(s)	606, 808, 982, 1074, 1624
PshBI	ATTAAT	2 cut(s)	1928, 2055
Psp6I	CCWGG	6 cut(s)	21, 444, 1444, 1490, 1788, 1919
PspEI	GGTNACC	1 cut(s)	1196
PspFI	CCCAGC	2 cut(s)	1305, 1463
PspGI	CCWGG	6 cut(s)	21, 444, 1444, 1490, 1788, 1919
PspN4I	GGNNCC	5 cut(s)	394, 901, 1067, 1314, 1745
PspPI	GGNCC	6 cut(s)	392, 631, 992, 1744, 1917, 2017
PstI	CTGCAG	2 cut(s)	1633, 1899
PsuI	RGATCY	2 cut(s)	858, 1157
PvuII	CAGCTG	1 cut(s)	1309
RsaI	GTAC	2 cut(s)	654, 912
RsaNI	GTAC	2 cut(s)	653, 911
RseI	CAYNNNNRTG	3 cut(s)	351, 525, 1897
SaqAI	TTAA	6 cut(s)	434, 563, 1139, 1418, 1928, 2055
SatI	GCNGC	5 cut(s)	605, 807, 981, 1073, 1623
Sau3AI	GATC	7 cut(s)	538, 858, 985, 1157, 1483, 1581, 1870
Sau96I	GGNCC	6 cut(s)	392, 631, 992, 1744, 1917, 2017
ScrFI	CCNGG	8 cut(s)	23, 446, 1039, 1040, 1446, 1492, 1790, 1921
SduI	GDGCHC	2 cut(s)	1317, 1894
SfaNI	GCATC	6 cut(s)	68, 261, 292, 772, 1256, 1807
SfcI	CTRYAG	2 cut(s)	1629, 1895
SinI	GGWCC	5 cut(s)	392, 992, 1744, 1917, 2017
SmaI	CCCGGG	1 cut(s)	1040
SmiMI	CAYNNNNRTG	3 cut(s)	351, 525, 1897
SmlI	CTYRAG	1 cut(s)	670
SmoI	CTYRAG	1 cut(s)	670
SphI	GCATGC	1 cut(s)	124
Sse9I	AATT	8 cut(s)	277, 437, 941, 1033, 1122, 1635, 1929, 2079
SseBI	AGGCCT	3 cut(s)	568, 1657, 1952
SsiI	CCGC	4 cut(s)	464, 1317, 1623, 1747
SspI	AATATT	1 cut(s)	1368
SspMI	CTAG	4 cut(s)	516, 831, 1148, 1398
StuI	AGGCCT	3 cut(s)	568, 1657, 1952
StyD4I	CCNGG	8 cut(s)	21, 444, 1037, 1038, 1444, 1490, 1788, 1919
StyI	CCWWGG	3 cut(s)	588, 1642, 2013
TaaI	ACNGT	6 cut(s)	116, 555, 1137, 1481, 1537, 1960
TaiI	ACGT	2 cut(s)	897, 1726
TaqI	TCGA	2 cut(s)	848, 965
TasI	AATT	8 cut(s)	277, 437, 941, 1033, 1122, 1635, 1929, 2079
TatI	WGTACW	1 cut(s)	652
TauI	GCSGC	1 cut(s)	1625
Tru1I	TTAA	6 cut(s)	434, 563, 1139, 1418, 1928, 2055
Tru9I	TTAA	6 cut(s)	434, 563, 1139, 1418, 1928, 2055
TscAI	CASTG	7 cut(s)	121, 169, 1084, 1457, 1542, 1899, 1904
TseFI	GTSAC	2 cut(s)	596, 1513
TseI	GCWGC	4 cut(s)	604, 806, 980, 1072
Tsp45I	GTSAC	2 cut(s)	596, 1513
TspGWI	ACGGA	3 cut(s)	271, 638, 1399
TspMI	CCCGGG	1 cut(s)	1038
TspRI	CASTG	7 cut(s)	121, 169, 1084, 1457, 1542, 1899, 1904
VpaK11BI	GGWCC	5 cut(s)	392, 992, 1744, 1917, 2017
VspI	ATTAAT	2 cut(s)	1928, 2055
XapI	RAATTY	3 cut(s)	437, 1033, 1635
XceI	RCATGY	3 cut(s)	124, 350, 1840
XcmI	CCANNNNNNNNNTGG	2 cut(s)	29, 1567
XmaI	CCCGGG	1 cut(s)	1038
XmiI	GTMKAC	2 cut(s)	53, 111
XmnI	GAANNNNTTC	1 cut(s)	583
XspI	CTAG	4 cut(s)	516, 831, 1148, 1398
Zsp2I	ATGCAT	1 cut(s)	238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.