MD14G1054200.v1.1
ERF Family

Belongs to the protein kinase superfamily. Tyr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
5455860 .. 5463932
8073 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1054200.v1.1.491

Sequence Viewer

Length: 1110 bp
ATGAGCTGCTGCGGGGGTGCGGAGGAGGAAAACTTCGGCCCACCTGCTAATCAATACACCGCCCCGCCCAGAGGTGGGAATACATATGGAGGAGGAGGAGGAGGAGGCAATGACAGAGGAGAGCCAAGGGGTTCCAATACGGTTAAAAGCGGAGCTCCACAGAAGGCCTTACCGATTGAAATACCATCTATGTCTTTGGATGAACTAAATAGGTTAACGGGTAACTTTGGTCCGAAGGCTTTGATAGGAGAAGGTTCTTATGGCCGGGTTTTCCATGCAAAACTGAGTAATGGTAAGGCTGCTGCTATAAAGAAAATGGACACGGGTACATCTCAAGAGCCGGACTCTGACTTTTCAGTACAATTATCAACAGTGTCAAGACTCAAGCATGAGCATTTTGTGGAGTTGATGGGGTATTGCTTGGACGCAAATAACCGAATTTTGATATATGAGTTTGCAACCATGGGATCTTTACATGACATATTGCATGGAAGAAAAGGAGTACAAGGGGCTGAACCAGGTCCAGTTCTTAGTTGGAATCAGAGAATTAAAATTGCCTATGGTGCAGCCAAAGGTCTCGAGTATCTCCATGAAAAGGTTCAACCTTCAATTGTTCACCGTGACGTGAGATCCAGCAATGTCCTGCTCTTTGATGACCATGTTGCCAAAATTGCGGACTTCAATTTGTCAAATCAGTCATCGGACACGGCCGCGCGACTGCATTCGACTAGAGTGTTGGGAACGTTTGGCTATCATGCTCCTGAGTATGCGATGACAGGGCAAATTACTCAGAAAAGTGATGTTTACAGTTTTGGAGTTGTTTTACTAGAGCTTTTGACAGGAAGAAAGCCCGTAGACCATACAATGCCAAAGGGGCAACAAAGTCTTGTTACTTGGGCAACTCCAAGACTGAGTGAGGATAAAGTGAAGCAGTGTGTTGATCCCAAGCTAAACAATGACTACCCACCAAAGGCAATTGCTAAGTTGGCAGCAGTAGCAGCACTTTGTGTTCAATATGAAGCTGACTTCAGGCCAAACATGACGATCGTTGTGAAGGCTCTACAGCCACTGCTAAACGCAAAACCTGCAGGCCCAGAGACAAATGCTTAG

Protein Analysis

370

Amino Acids

39.76

Weight (kDa)

8.16

Isoelectric Point (pI)

25.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 80 - 296 6.5e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 81 - 354 2.6e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013794)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 52
Acc36I ACCTGC 2 cut(s) 52, 1093
AccI GTMKAC 1 cut(s) 855
AccII CGCG 2 cut(s) 713, 715
AciI CCGC 7 cut(s) 12, 20, 60, 65, 150, 674, 711
AclI AACGTT 1 cut(s) 743
AclWI GGATC 3 cut(s) 475, 624, 935
AcoI YGGCCR 2 cut(s) 262, 708
AcsI RAATTY 1 cut(s) 438
AcuI CTGAAG 1 cut(s) 1012
AdeI CACNNNGTG 1 cut(s) 1007
AfaI GTAC 3 cut(s) 328, 360, 504
AfiI CCNNNNNNNGG 5 cut(s) 71, 74, 75, 595, 970
AgsI TTSAA 5 cut(s) 179, 602, 609, 682, 1013
AjiI CACGTC 1 cut(s) 625
AjnI CCWGG 1 cut(s) 517
AluBI AGCT 5 cut(s) 6, 155, 832, 949, 1022
AluI AGCT 5 cut(s) 6, 155, 832, 949, 1022
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 2 cut(s) 581, 1091
AlwI GGATC 3 cut(s) 475, 624, 935
AlwNI CAGNNNCTG 1 cut(s) 1069
Ama87I CYCGRG 1 cut(s) 578
AoxI GGCC 6 cut(s) 37, 165, 262, 708, 1031, 1090
ApeKI GCWGC 7 cut(s) 6, 9, 299, 302, 566, 989, 998
ApoI RAATTY 1 cut(s) 438
Asp700I GAANNNNTTC 1 cut(s) 597
AspLEI GCGC 1 cut(s) 715
AspS9I GGNCC 4 cut(s) 38, 230, 521, 1091
AsuC2I CCSGG 1 cut(s) 266
AsuHPI GGTGA 1 cut(s) 608
AvaI CYCGRG 1 cut(s) 578
AvaII GGWCC 2 cut(s) 230, 521
BanII GRGCYC 1 cut(s) 157
Bbv12I GWGCWC 1 cut(s) 157
BbvI GCAGC 5 cut(s) 286, 289, 578, 1001, 1010
BccI CCATC 2 cut(s) 193, 403
BceAI ACGGC 1 cut(s) 723
BciT130I CCWGG 1 cut(s) 519
BcnI CCSGG 1 cut(s) 266
BcoDI GTCTC 2 cut(s) 581, 1091
BfaI CTAG 2 cut(s) 729, 827
BfmI CTRYAG 2 cut(s) 1061, 1086
BfuAI ACCTGC 2 cut(s) 52, 1093
BglI GCCNNNNNGGC 1 cut(s) 874
BisI GCNGC 8 cut(s) 7, 10, 300, 303, 567, 711, 990, 999
BlsI GCNGC 8 cut(s) 8, 11, 301, 304, 568, 712, 991, 1000
Bme1390I CCNGG 2 cut(s) 266, 519
Bme18I GGWCC 2 cut(s) 230, 521
BmeT110I CYCGRG 1 cut(s) 578
BmgBI CACGTC 1 cut(s) 625
BmgT120I GGNCC 4 cut(s) 38, 230, 521, 1091
BmiI GGNNCC 1 cut(s) 133
BmrFI CCNGG 2 cut(s) 266, 519
BplI GAGNNNNNCTC 2 cut(s) 329, 361
BpuEI CTTGAG 2 cut(s) 318, 368
BpuMI CCSGG 1 cut(s) 266
BsaI GGTCTC 1 cut(s) 581
BsaJI CCNNGG 2 cut(s) 125, 462
Bsc4I CCNNNNNNNGG 5 cut(s) 71, 74, 75, 595, 970
Bse1I ACTGG 1 cut(s) 524
Bse3DI GCAATG 2 cut(s) 115, 643
BseBI CCWGG 1 cut(s) 519
BseDI CCNNGG 2 cut(s) 125, 462
BseGI GGATG 1 cut(s) 205
BseLI CCNNNNNNNGG 5 cut(s) 71, 74, 75, 595, 970
BseMI GCAATG 2 cut(s) 115, 643
BseMII CTCAG 4 cut(s) 275, 753, 803, 902
BseNI ACTGG 1 cut(s) 524
BseRI GAGGAG 7 cut(s) 38, 105, 108, 111, 114, 117, 132
BseX3I CGGCCG 1 cut(s) 708
BseXI GCAGC 5 cut(s) 286, 289, 578, 1001, 1010
BsgI GTGCAG 1 cut(s) 585
Bsh1236I CGCG 2 cut(s) 713, 715
Bsh1285I CGRYCG 2 cut(s) 711, 1047
BshFI GGCC 6 cut(s) 39, 167, 264, 710, 1033, 1092
BsiEI CGRYCG 2 cut(s) 711, 1047
BsiHKAI GWGCWC 1 cut(s) 157
BsiHKCI CYCGRG 1 cut(s) 578
BsiSI CCGG 2 cut(s) 265, 341
BslI CCNNNNNNNGG 5 cut(s) 71, 74, 75, 595, 970
BsmAI GTCTC 2 cut(s) 581, 1091
BsmI GAATGC 1 cut(s) 721
BsnI GGCC 6 cut(s) 39, 167, 264, 710, 1033, 1092
Bso31I GGTCTC 1 cut(s) 581
BsoBI CYCGRG 1 cut(s) 578
Bsp1286I GDGCHC 1 cut(s) 157
Bsp143I GATC 4 cut(s) 467, 629, 940, 1044
Bsp19I CCATGG 1 cut(s) 462
BspACI CCGC 7 cut(s) 12, 20, 60, 65, 150, 674, 711
BspANI GGCC 6 cut(s) 39, 167, 264, 710, 1033, 1092
BspCNI CTCAG 4 cut(s) 276, 754, 802, 903
BspFNI CGCG 2 cut(s) 713, 715
BspLI GGNNCC 1 cut(s) 133
BspMAI CTGCAG 1 cut(s) 1090
BspMI ACCTGC 2 cut(s) 52, 1093
BspPI GGATC 3 cut(s) 475, 624, 935
BspTNI GGTCTC 1 cut(s) 581
BsrDI GCAATG 2 cut(s) 115, 643
BsrI ACTGG 1 cut(s) 524
BssECI CCNNGG 2 cut(s) 125, 462
BssMI GATC 4 cut(s) 467, 629, 940, 1044
BssT1I CCWWGG 2 cut(s) 125, 462
Bst2UI CCWGG 1 cut(s) 519
Bst4CI ACNGT 4 cut(s) 142, 373, 620, 809
BstAPI GCANNNNNTGC 1 cut(s) 1085
BstC8I GCNNGC 1 cut(s) 1090
BstDEI CTNAG 7 cut(s) 284, 530, 762, 789, 911, 981, 1107
BstDSI CCRYGG 1 cut(s) 462
BstF5I GGATG 1 cut(s) 205
BstFNI CGCG 2 cut(s) 713, 715
BstHHI GCGC 1 cut(s) 715
BstKTI GATC 4 cut(s) 470, 632, 943, 1047
BstMAI GTCTC 2 cut(s) 581, 1091
BstMBI GATC 4 cut(s) 467, 629, 940, 1044
BstMCI CGRYCG 2 cut(s) 711, 1047
BstMWI GCNNNNNNNGC 7 cut(s) 563, 671, 874, 986, 995, 998, 1085
BstNI CCWGG 1 cut(s) 519
BstSCI CCNGG 2 cut(s) 264, 517
BstSFI CTRYAG 2 cut(s) 1061, 1086
BstUI CGCG 2 cut(s) 713, 715
BstV1I GCAGC 5 cut(s) 286, 289, 578, 1001, 1010
BstX2I RGATCY 2 cut(s) 467, 629
BstYI RGATCY 2 cut(s) 467, 629
BstZI CGGCCG 1 cut(s) 708
BsuRI GGCC 6 cut(s) 39, 167, 264, 710, 1033, 1092
BtgI CCRYGG 1 cut(s) 462
BtgZI GCGATG 1 cut(s) 785
BtrI CACGTC 1 cut(s) 625
BtsCI GGATG 1 cut(s) 205
BtsI GCAGTG 2 cut(s) 938, 1067
BtsIMutI CAGTG 3 cut(s) 378, 938, 1067
BveI ACCTGC 2 cut(s) 52, 1093
Cac8I GCNNGC 1 cut(s) 1090
CaiI CAGNNNCTG 1 cut(s) 1069
CfoI GCGC 1 cut(s) 715
Cfr13I GGNCC 4 cut(s) 38, 230, 521, 1091
CseI GACGC 1 cut(s) 434
CsiI ACCWGGT 1 cut(s) 517
Csp6I GTAC 3 cut(s) 327, 359, 503
CviAII CATG 9 cut(s) 275, 389, 463, 476, 488, 590, 659, 755, 1039
CviQI GTAC 3 cut(s) 327, 359, 503
DdeI CTNAG 7 cut(s) 284, 530, 762, 789, 911, 981, 1107
DpnI GATC 4 cut(s) 469, 631, 942, 1046
DpnII GATC 4 cut(s) 467, 629, 940, 1044
DraIII CACNNNGTG 1 cut(s) 1007
EaeI YGGCCR 2 cut(s) 262, 708
EagI CGGCCG 1 cut(s) 708
Ecl136II GAGCTC 1 cut(s) 155
EclXI CGGCCG 1 cut(s) 708
Eco130I CCWWGG 2 cut(s) 125, 462
Eco147I AGGCCT 1 cut(s) 167
Eco24I GRGCYC 1 cut(s) 157
Eco31I GGTCTC 1 cut(s) 581
Eco47I GGWCC 2 cut(s) 230, 521
Eco52I CGGCCG 1 cut(s) 708
Eco53kI GAGCTC 1 cut(s) 155
Eco57I CTGAAG 1 cut(s) 1012
Eco88I CYCGRG 1 cut(s) 578
EcoICRI GAGCTC 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 517
EcoT14I CCWWGG 2 cut(s) 125, 462
EcoT38I GRGCYC 1 cut(s) 157
ErhI CCWWGG 2 cut(s) 125, 462
FaeI CATG 9 cut(s) 278, 392, 466, 479, 491, 593, 662, 758, 1042
FatI CATG 9 cut(s) 274, 388, 462, 475, 487, 589, 658, 754, 1038
FauI CCCGC 2 cut(s) 5, 72
FauNDI CATATG 1 cut(s) 85
FblI GTMKAC 1 cut(s) 855
Fnu4HI GCNGC 8 cut(s) 7, 10, 300, 303, 567, 711, 990, 999
FokI GGATG 1 cut(s) 212
FriOI GRGCYC 1 cut(s) 157
Fsp4HI GCNGC 8 cut(s) 7, 10, 300, 303, 567, 711, 990, 999
FspBI CTAG 2 cut(s) 729, 827
GlaI GCGC 1 cut(s) 714
GluI GCNGC 8 cut(s) 7, 10, 300, 303, 567, 711, 990, 999
HaeIII GGCC 6 cut(s) 39, 167, 264, 710, 1033, 1092
HapII CCGG 2 cut(s) 265, 341
HgaI GACGC 1 cut(s) 434
HhaI GCGC 1 cut(s) 715
Hin1II CATG 9 cut(s) 278, 392, 466, 479, 491, 593, 662, 758, 1042
Hin6I GCGC 1 cut(s) 713
HinP1I GCGC 1 cut(s) 713
HincII GTYRAC 1 cut(s) 216
HindII GTYRAC 1 cut(s) 216
HinfI GANTC 3 cut(s) 344, 381, 538
HpaI GTTAAC 1 cut(s) 216
HpaII CCGG 2 cut(s) 265, 341
HphI GGTGA 1 cut(s) 608
Hpy166II GTNNAC 4 cut(s) 216, 616, 805, 856
Hpy188I TCNGA 5 cut(s) 234, 349, 543, 703, 792
Hpy188III TCNNGA 4 cut(s) 335, 378, 578, 761
Hpy8I GTNNAC 4 cut(s) 216, 616, 805, 856
HpyAV CCTTC 5 cut(s) 157, 229, 245, 615, 1048
HpyCH4III ACNGT 4 cut(s) 142, 373, 620, 809
HpyCH4IV ACGT 2 cut(s) 624, 743
HpyCH4V TGCA 6 cut(s) 278, 458, 487, 566, 721, 1088
HpyF10VI GCNNNNNNNGC 7 cut(s) 563, 671, 874, 986, 995, 998, 1085
HpyF3I CTNAG 7 cut(s) 284, 530, 762, 789, 911, 981, 1107
HpySE526I ACGT 2 cut(s) 624, 743
Hsp92II CATG 9 cut(s) 278, 392, 466, 479, 491, 593, 662, 758, 1042
HspAI GCGC 1 cut(s) 713
KspAI GTTAAC 1 cut(s) 216
Kzo9I GATC 4 cut(s) 467, 629, 940, 1044
LmnI GCTCC 3 cut(s) 152, 160, 763
Lsp1109I GCAGC 5 cut(s) 286, 289, 578, 1001, 1010
MabI ACCWGGT 1 cut(s) 517
MaeI CTAG 2 cut(s) 729, 827
MaeII ACGT 2 cut(s) 624, 743
MaeIII GTNAC 3 cut(s) 221, 620, 889
MalI GATC 4 cut(s) 469, 631, 942, 1046
MboI GATC 4 cut(s) 467, 629, 940, 1044
MboII GAAGA 2 cut(s) 504, 855
MfeI CAATTG 2 cut(s) 609, 975
MflI RGATCY 2 cut(s) 467, 629
MhlI GDGCHC 1 cut(s) 157
MluCI AATT 9 cut(s) 362, 438, 546, 552, 609, 669, 682, 783, 975
MlyI GAGTC 2 cut(s) 338, 375
MmeI TCCRAC 1 cut(s) 515
MroXI GAANNNNTTC 1 cut(s) 597
MseI TTAA 3 cut(s) 144, 215, 549
MspI CCGG 2 cut(s) 265, 341
MspR9I CCNGG 2 cut(s) 266, 519
MunI CAATTG 2 cut(s) 609, 975
Mva1269I GAATGC 1 cut(s) 721
MvaI CCWGG 1 cut(s) 519
MvnI CGCG 2 cut(s) 713, 715
MwoI GCNNNNNNNGC 7 cut(s) 563, 671, 874, 986, 995, 998, 1085
NciI CCSGG 1 cut(s) 266
NcoI CCATGG 1 cut(s) 462
NdeI CATATG 1 cut(s) 85
NdeII GATC 4 cut(s) 467, 629, 940, 1044
NlaIII CATG 9 cut(s) 278, 392, 466, 479, 491, 593, 662, 758, 1042
NlaIV GGNNCC 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 620
PaeR7I CTCGAG 1 cut(s) 578
PaqCI CACCTGC 1 cut(s) 52
PceI AGGCCT 1 cut(s) 167
PctI GAATGC 1 cut(s) 721
PdmI GAANNNNTTC 1 cut(s) 597
PfeI GAWTC 1 cut(s) 538
PkrI GCNGC 8 cut(s) 8, 11, 301, 304, 568, 712, 991, 1000
Ple19I CGATCG 1 cut(s) 1047
PleI GAGTC 2 cut(s) 338, 375
PpsI GAGTC 2 cut(s) 338, 375
Psp124BI GAGCTC 1 cut(s) 157
Psp1406I AACGTT 1 cut(s) 743
Psp6I CCWGG 1 cut(s) 517
PspGI CCWGG 1 cut(s) 517
PspN4I GGNNCC 1 cut(s) 133
PspPI GGNCC 4 cut(s) 38, 230, 521, 1091
PstI CTGCAG 1 cut(s) 1090
PstNI CAGNNNCTG 1 cut(s) 1069
PsuI RGATCY 2 cut(s) 467, 629
PvuI CGATCG 1 cut(s) 1047
RsaI GTAC 3 cut(s) 328, 360, 504
RsaNI GTAC 3 cut(s) 327, 359, 503
SacI GAGCTC 1 cut(s) 157
SaqAI TTAA 3 cut(s) 144, 215, 549
SatI GCNGC 8 cut(s) 7, 10, 300, 303, 567, 711, 990, 999
Sau3AI GATC 4 cut(s) 467, 629, 940, 1044
Sau96I GGNCC 4 cut(s) 38, 230, 521, 1091
SbfI CCTGCAGG 1 cut(s) 1090
SchI GAGTC 2 cut(s) 338, 375
ScrFI CCNGG 2 cut(s) 266, 519
SdaI CCTGCAGG 1 cut(s) 1090
SduI GDGCHC 1 cut(s) 157
SexAI ACCWGGT 1 cut(s) 517
SfcI CTRYAG 2 cut(s) 1061, 1086
Sfr274I CTCGAG 1 cut(s) 578
SinI GGWCC 2 cut(s) 230, 521
SlaI CTCGAG 1 cut(s) 578
SmlI CTYRAG 3 cut(s) 333, 383, 578
SmoI CTYRAG 3 cut(s) 333, 383, 578
Sse8387I CCTGCAGG 1 cut(s) 1090
Sse9I AATT 9 cut(s) 362, 438, 546, 552, 609, 669, 682, 783, 975
SseBI AGGCCT 1 cut(s) 167
SsiI CCGC 7 cut(s) 12, 20, 60, 65, 150, 674, 711
SspMI CTAG 2 cut(s) 729, 827
SstI GAGCTC 1 cut(s) 157
StuI AGGCCT 1 cut(s) 167
StyD4I CCNGG 2 cut(s) 264, 517
StyI CCWWGG 2 cut(s) 125, 462
TaaI ACNGT 4 cut(s) 142, 373, 620, 809
TaiI ACGT 2 cut(s) 627, 746
TaqI TCGA 2 cut(s) 579, 725
TasI AATT 9 cut(s) 362, 438, 546, 552, 609, 669, 682, 783, 975
TatI WGTACW 2 cut(s) 358, 502
TauI GCSGC 1 cut(s) 713
TfiI GAWTC 1 cut(s) 538
Tru1I TTAA 3 cut(s) 144, 215, 549
Tru9I TTAA 3 cut(s) 144, 215, 549
TscAI CASTG 3 cut(s) 378, 938, 1074
TseFI GTSAC 1 cut(s) 620
TseI GCWGC 7 cut(s) 6, 9, 299, 302, 566, 989, 998
Tsp45I GTSAC 1 cut(s) 620
TspDTI ATGAA 3 cut(s) 216, 606, 1032
TspRI CASTG 3 cut(s) 378, 938, 1074
VpaK11BI GGWCC 2 cut(s) 230, 521
XapI RAATTY 1 cut(s) 438
XcmI CCANNNNNNNNNTGG 1 cut(s) 531
XhoI CTCGAG 1 cut(s) 578
XmiI GTMKAC 1 cut(s) 855
XmnI GAANNNNTTC 1 cut(s) 597
XspI CTAG 2 cut(s) 729, 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.