MD14G1095200.v1.1

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0012993
Physical Location & Seq
Reverse (-)
14340010 .. 14342417
2408 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1095200.v1.1.491

Sequence Viewer

Length: 816 bp
ATGGCCACAAAAACCCTAGTGCTCTATCTCCTTTCGAGTTTCTCTCTCGCTATTCTCTCTGTGTTTTTCACTCACCAATATGATTACTACTCTCCCCAAATCTGCCTTTCCAGTTATCTCAGTTCCAATCTCTCCCACCTCTCCACCACCAATAAAACATGGCATGAATTGAAGTTCAGTTTGAGGCTTGTGCTAGTGATTGGATTTCTGGGGTCAGCATGTGGGACTGTGGGAGGAGTAGGAGGGGGGGGAATATTTGTTCCTATGCTTACTTTGATTGTTGGATTTGATACCAAGTCTACTGCTGCTGCTCTCTCTAAATGTATGATAATGGGGGCATCAGCATCATCAGTGTGGTACAATCTGAGAGTGCCTCATCCAACAAATGAAGTGCCAATTATAGACTATGAATTGGCCCTTCTCTTTCAGCCCATGCTCATGCTTGGCATTACCTTCGGTGTTTCTCTCAGTGTTGTCTTCCCGTACTGGCTCATCACTGTCCTCATCATTATTCTCTTCCTGGGGACTTCATCAAGGCCTTGTTTTAAAGGGGCTCAGATATGGAAGGAAGAGACTATTTTAAAGAAAGAGTATGCAAGGGAGCAAGAAGCTACAGTGAGCTCTCAGAGCAAACATCTAATTAATGAAGAGTATGAGTCATTACTTCCAAGAGAAGAGAAATCAATGATGCAAATACTAATGTTCAATCTTAGATGGAAAAAGGTGTTGGTGCTGGTAGCTGTATGGGTTATTTTCCTTCTTCTTCAAATCCTCAAGGCAAGTAATCCTCCTCTCCCTGATTGGAGAAGGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

272

Amino Acids

30.46

Weight (kDa)

8.97

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 65 - 177 2.3e-09 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012993)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36630
fragaria_vesca FvH4_6g17410
malus_domestica MD12G1100900.v1.1 MD14G1095200.v1.1
prunus_persica Prupe.7G121400_v2.0.a1 Prupe.7G121400_v2.0.a1
pyrus_communis pycom12g09930
rosa_chinensis RchiOBHm_Chr3g0471661
rosa_laevigata RLG00000024145
rosa_multiflora Rmu_sc0005631.1_g000013
rosa_roxburghii Rroxscaffold_6G00409680
rosa_rugosa Rorug03G0118600
rosa_samantha Rh3AG169900 Rh3BG195600 Rh3CG186300 Rh3CG195400 Rh3DG179400
rosa_wichuraiana Rw0G008980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 299
AcoI YGGCCR 1 cut(s) 3
AfaI GTAC 2 cut(s) 359, 485
AgsI TTSAA 3 cut(s) 172, 706, 767
AjnI CCWGG 1 cut(s) 519
AjuI GAANNNNNNNTTGG 2 cut(s) 710, 742
AloI GAACNNNNNNTCC 2 cut(s) 243, 275
AluBI AGCT 3 cut(s) 611, 621, 740
AluI AGCT 3 cut(s) 611, 621, 740
Alw21I GWGCWC 2 cut(s) 24, 623
Alw26I GTCTC 1 cut(s) 566
AoxI GGCC 3 cut(s) 3, 414, 536
ApeKI GCWGC 2 cut(s) 305, 308
AseI ATTAAT 1 cut(s) 642
AspS9I GGNCC 1 cut(s) 415
AsuHPI GGTGA 1 cut(s) 65
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 556, 623
BbsI GAAGAC 1 cut(s) 469
Bbv12I GWGCWC 2 cut(s) 24, 623
BbvI GCAGC 2 cut(s) 292, 295
BccI CCATC 1 cut(s) 708
BcgI CGANNNNNNTGC 2 cut(s) 436, 470
BciT130I CCWGG 1 cut(s) 521
BcoDI GTCTC 1 cut(s) 566
BfaI CTAG 2 cut(s) 17, 194
BfmI CTRYAG 1 cut(s) 612
BisI GCNGC 2 cut(s) 306, 309
BlsI GCNGC 2 cut(s) 307, 310
Bme1390I CCNGG 1 cut(s) 521
BmgT120I GGNCC 1 cut(s) 415
BmrFI CCNGG 1 cut(s) 521
BmsI GCATC 3 cut(s) 347, 353, 678
BpiI GAAGAC 1 cut(s) 469
BplI GAGNNNNNCTC 4 cut(s) 28, 60, 358, 390
BpuEI CTTGAG 1 cut(s) 758
BsaJI CCNNGG 1 cut(s) 520
Bse1I ACTGG 2 cut(s) 111, 491
BseBI CCWGG 1 cut(s) 521
BseDI CCNNGG 1 cut(s) 520
BseGI GGATG 1 cut(s) 376
BseMII CTCAG 5 cut(s) 133, 356, 481, 569, 638
BseNI ACTGG 2 cut(s) 111, 491
BseRI GAGGAG 2 cut(s) 249, 780
BseXI GCAGC 2 cut(s) 292, 295
BshFI GGCC 3 cut(s) 5, 416, 538
BsiHKAI GWGCWC 2 cut(s) 24, 623
BslFI GGGAC 2 cut(s) 238, 538
BsmAI GTCTC 1 cut(s) 566
BsmFI GGGAC 2 cut(s) 238, 538
BsnI GGCC 3 cut(s) 5, 416, 538
Bsp1286I GDGCHC 3 cut(s) 24, 556, 623
BspANI GGCC 3 cut(s) 5, 416, 538
BspCNI CTCAG 5 cut(s) 132, 357, 480, 568, 637
BsrI ACTGG 2 cut(s) 111, 491
BssECI CCNNGG 1 cut(s) 520
Bst2UI CCWGG 1 cut(s) 521
Bst4CI ACNGT 3 cut(s) 229, 499, 616
Bst6I CTCTTC 4 cut(s) 521, 564, 642, 669
BstDEI CTNAG 7 cut(s) 119, 365, 467, 555, 624, 710, 813
BstF5I GGATG 1 cut(s) 376
BstMAI GTCTC 1 cut(s) 566
BstMWI GCNNNNNNNGC 1 cut(s) 627
BstNI CCWGG 1 cut(s) 521
BstNSI RCATGY 1 cut(s) 222
BstSCI CCNGG 1 cut(s) 519
BstSFI CTRYAG 1 cut(s) 612
BstV1I GCAGC 2 cut(s) 292, 295
BstV2I GAAGAC 1 cut(s) 469
BsuRI GGCC 3 cut(s) 5, 416, 538
BtsCI GGATG 1 cut(s) 376
BtsIMutI CAGTG 4 cut(s) 357, 475, 495, 621
Cfr13I GGNCC 1 cut(s) 415
Csp6I GTAC 2 cut(s) 358, 484
CviAII CATG 5 cut(s) 159, 164, 219, 433, 439
CviQI GTAC 2 cut(s) 358, 484
DdeI CTNAG 7 cut(s) 119, 365, 467, 555, 624, 710, 813
DraI TTTAAA 2 cut(s) 547, 582
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 521, 564, 642, 669
EarI CTCTTC 4 cut(s) 521, 564, 642, 669
Ecl136II GAGCTC 1 cut(s) 621
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 2 cut(s) 556, 623
Eco53kI GAGCTC 1 cut(s) 621
EcoICRI GAGCTC 1 cut(s) 621
EcoRII CCWGG 1 cut(s) 519
EcoT38I GRGCYC 2 cut(s) 556, 623
FaeI CATG 5 cut(s) 162, 167, 222, 436, 442
FaqI GGGAC 2 cut(s) 238, 538
FatI CATG 5 cut(s) 158, 163, 218, 432, 438
FblI GTMKAC 1 cut(s) 299
Fnu4HI GCNGC 2 cut(s) 306, 309
FokI GGATG 1 cut(s) 363
FriOI GRGCYC 2 cut(s) 556, 623
Fsp4HI GCNGC 2 cut(s) 306, 309
FspBI CTAG 2 cut(s) 17, 194
GluI GCNGC 2 cut(s) 306, 309
HaeIII GGCC 3 cut(s) 5, 416, 538
Hin1II CATG 5 cut(s) 162, 167, 222, 436, 442
HinfI GANTC 1 cut(s) 656
HphI GGTGA 1 cut(s) 65
Hpy166II GTNNAC 1 cut(s) 300
Hpy188I TCNGA 3 cut(s) 366, 558, 627
Hpy8I GTNNAC 1 cut(s) 300
HpyAV CCTTC 5 cut(s) 428, 463, 559, 767, 801
HpyCH4III ACNGT 3 cut(s) 229, 499, 616
HpyCH4V TGCA 2 cut(s) 596, 691
HpyF10VI GCNNNNNNNGC 1 cut(s) 627
HpyF3I CTNAG 7 cut(s) 119, 365, 467, 555, 624, 710, 813
Hsp92II CATG 5 cut(s) 162, 167, 222, 436, 442
LmnI GCTCC 1 cut(s) 601
LpnPI CCDG 7 cut(s) 124, 194, 472, 506, 533, 719, 810
Lsp1109I GCAGC 2 cut(s) 292, 295
LweI GCATC 3 cut(s) 347, 353, 678
MaeI CTAG 2 cut(s) 17, 194
MboII GAAGA 7 cut(s) 469, 508, 581, 659, 686, 752, 755
MhlI GDGCHC 3 cut(s) 24, 556, 623
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 167, 396, 410, 639
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 665
MmeI TCCRAC 2 cut(s) 262, 404
MnlI CCTC 9 cut(s) 149, 177, 227, 236, 384, 512, 782, 798, 801
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 546, 581, 642
MslI CAYNNNNRTG 3 cut(s) 78, 352, 437
Msp20I TGGCCA 1 cut(s) 5
MspR9I CCNGG 1 cut(s) 521
MvaI CCWGG 1 cut(s) 521
MwoI GCNNNNNNNGC 1 cut(s) 627
NlaIII CATG 5 cut(s) 162, 167, 222, 436, 442
NspI RCATGY 1 cut(s) 222
PceI AGGCCT 1 cut(s) 538
PkrI GCNGC 2 cut(s) 307, 310
PleI GAGTC 1 cut(s) 664
PpsI GAGTC 1 cut(s) 664
PshBI ATTAAT 1 cut(s) 642
Psp124BI GAGCTC 1 cut(s) 623
Psp6I CCWGG 1 cut(s) 519
PspGI CCWGG 1 cut(s) 519
PspPI GGNCC 1 cut(s) 415
RsaI GTAC 2 cut(s) 359, 485
RsaNI GTAC 2 cut(s) 358, 484
RseI CAYNNNNRTG 3 cut(s) 78, 352, 437
SacI GAGCTC 1 cut(s) 623
SaqAI TTAA 3 cut(s) 546, 581, 642
SatI GCNGC 2 cut(s) 306, 309
Sau96I GGNCC 1 cut(s) 415
SchI GAGTC 1 cut(s) 665
ScrFI CCNGG 1 cut(s) 521
SduI GDGCHC 3 cut(s) 24, 556, 623
SetI ASST 6 cut(s) 141, 455, 613, 623, 726, 742
SfaNI GCATC 3 cut(s) 347, 353, 678
SfcI CTRYAG 1 cut(s) 612
SmiMI CAYNNNNRTG 3 cut(s) 78, 352, 437
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
Sse9I AATT 4 cut(s) 167, 396, 410, 639
SseBI AGGCCT 1 cut(s) 538
SspI AATATT 1 cut(s) 255
SspMI CTAG 2 cut(s) 17, 194
SstI GAGCTC 1 cut(s) 623
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 1 cut(s) 519
TaaI ACNGT 3 cut(s) 229, 499, 616
TaqI TCGA 1 cut(s) 35
TasI AATT 4 cut(s) 167, 396, 410, 639
Tru1I TTAA 3 cut(s) 546, 581, 642
Tru9I TTAA 3 cut(s) 546, 581, 642
TscAI CASTG 4 cut(s) 357, 475, 502, 621
TseI GCWGC 2 cut(s) 305, 308
TspDTI ATGAA 5 cut(s) 180, 402, 423, 519, 660
TspRI CASTG 4 cut(s) 357, 475, 502, 621
VspI ATTAAT 1 cut(s) 642
XceI RCATGY 1 cut(s) 222
XmiI GTMKAC 1 cut(s) 299
XspI CTAG 2 cut(s) 17, 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.