RLG00000024145

Sulfite exporter TauE/SafE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0012993
Physical Location & Seq
Reverse (-)
32438986 .. 32441444
2459 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024145

Sequence Viewer

Length: 1389 bp
ATGGCCACGAAAGCCTTCCTTCTCTATCTTCTCTCTACTTTCTCGGTTGCTATTCTCTCTGTGCTATTCTTCACTCACCAGAATGATCACATCTCTTACCAAACCCGCCTTTCTTCTCTCAATTCCAATCTCTTGCACTTGGGAGCCACGGAGACAGTGTGGCCGGATTTGGCGTTTAACTGGAGACTTGTGCTGGCCACAGTGATTGGTTTTCTGGGATCGGCGTGTGGAACTGTGGGAGGGGTAGGAGGGGGTGGTATATTTGTCCCTATGCTTACCTTGATTGTTGGTTTTGATACAAAGTCGGCTGCTGCTATTTCCAAATGTATGATAATGGGGGCTTCTGCATCATCAGTGTGGTACAACTTGAGAGTGCCCCATCCTACAAAGGAAGTACCGATAATAGATTATGATCTGGCACTTCTCTTTCAGCCCATGCTCATGCTTGGGATCACACTTGGTGTGGCTCTCAGTGTGGTCTTCCCCTACTGGCTCATCACTGTTCTCATCATTATTCTCTTCTTGGGCACTTCATCAAGGTCTGCTTACAAAGGGGTTGAGATGTGGAAGGAAGAGACTATGTTAAAGAGGGAATTGGCAAACCAACATGAAGCTCGAGTTGACTCTCGTGGCGAACTTCTAATTGATACAGAATATCAGCAGTTAAATCCCAGAGAAGAAAAGTCAATGATGCAAATATTATGTTTCAACCTCAGGTGGAAAAGGGTGATGGTGCTAGTAATTCTTTGGGGGGCTTTTCTACTTGTTCAACTCTTCAAGAATGATTTAGCTACTTGCAGTACATGGTATTGGGTTCTCTTCTGCTTACAGTTTCCTATAGCATTTGGCGTTTTTGGATATGAAGCACGCAAGTTGTACAAAGATCACGAGAAAAGAATGGGCACAGGGAATTTAGAATCAATTTGTGAGGCTTCAATTGCATGGACTCCAATCCACATAGCATTTTGTGCACTCTCTGGTATCTTGGGAGGCACTGTTGGGGGTCTGCTTGGATCTGGTGGAGGATTTATTCTTGGCCCTCTCCTACTAGAAATAGGTGTTATCCCACAGGTTGCTAGTGCAACAGCTACATTTGTGATGATGTTTTCAGCATCCTTATCGGTGGTGGAGTTCTACCTCCTCAAGCGATTTCCTATTCCATATGCTTTGTACCTTACTAGTGTTTCTATCTTGGCCGGCTTTTGGGGACAGTTTCTTGTAAGGAAAATAGTTACATTTCTCAAGAGAGCATCAATCATAGTATTCGTCCTCTCAGGTGTCATCTTTGCTAGTGCCATCACTATGGGTGTCACTGGCATCACGTCGAGCCTCCAAATGATAGAAGATGGCGATTTTATGGGTTTCTTGGACTTCTGTAGCAGTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

463

Amino Acids

50.91

Weight (kDa)

7.58

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 68 - 183 1.4e-12 Sulfite exporter TauE/SafE
TauE PF01925 248 - 427 2.8e-10 Sulfite exporter TauE/SafE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012993)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36630
fragaria_vesca FvH4_6g17410
malus_domestica MD12G1100900.v1.1 MD14G1095200.v1.1
prunus_persica Prupe.7G121400_v2.0.a1 Prupe.7G121400_v2.0.a1
pyrus_communis pycom12g09930
rosa_chinensis RchiOBHm_Chr3g0471661
rosa_laevigata RLG00000024145
rosa_multiflora Rmu_sc0005631.1_g000013
rosa_roxburghii Rroxscaffold_6G00409680
rosa_rugosa Rorug03G0118600
rosa_samantha Rh3AG169900 Rh3BG195600 Rh3CG186300 Rh3CG195400 Rh3DG179400
rosa_wichuraiana Rw0G008980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 106
AclWI GGATC 3 cut(s) 226, 458, 1021
AcoI YGGCCR 4 cut(s) 3, 161, 195, 1194
AcsI RAATTY 1 cut(s) 910
AdeI CACNNNGTG 1 cut(s) 461
AfaI GTAC 5 cut(s) 362, 396, 802, 878, 1172
AfiI CCNNNNNNNGG 1 cut(s) 1203
AgsI TTSAA 4 cut(s) 709, 770, 778, 936
AhlI ACTAGT 1 cut(s) 1178
AjiI CACGTC 1 cut(s) 1323
AluBI AGCT 3 cut(s) 614, 791, 1088
AluI AGCT 3 cut(s) 614, 791, 1088
Alw21I GWGCWC 1 cut(s) 973
Alw26I GTCTC 3 cut(s) 146, 178, 569
Alw44I GTGCAC 1 cut(s) 969
AlwI GGATC 3 cut(s) 226, 458, 1021
Ama87I CYCGRG 1 cut(s) 615
AoxI GGCC 5 cut(s) 3, 161, 195, 1036, 1194
ApaLI GTGCAC 1 cut(s) 969
ApeKI GCWGC 2 cut(s) 308, 311
ApoI RAATTY 1 cut(s) 910
Asp700I GAANNNNTTC 1 cut(s) 14
AspS9I GGNCC 1 cut(s) 1037
AsuHPI GGTGA 2 cut(s) 68, 739
AvaI CYCGRG 1 cut(s) 615
AxyI CCTNAGG 1 cut(s) 713
BaeGI GKGCMC 4 cut(s) 378, 530, 905, 973
BalI TGGCCA 2 cut(s) 5, 197
BauI CACGAG 2 cut(s) 627, 887
BbsI GAAGAC 1 cut(s) 472
Bbv12I GWGCWC 1 cut(s) 973
BbvI GCAGC 2 cut(s) 295, 298
BccI CCATC 4 cut(s) 387, 724, 1304, 1340
BcgI CGANNNNNNTGC 2 cut(s) 1101, 1135
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 3 cut(s) 146, 178, 569
BcuI ACTAGT 1 cut(s) 1178
BfaI CTAG 5 cut(s) 737, 1049, 1077, 1179, 1290
BfmI CTRYAG 2 cut(s) 837, 1375
BisI GCNGC 2 cut(s) 309, 312
BlsI GCNGC 2 cut(s) 310, 313
BmeT110I CYCGRG 1 cut(s) 615
BmgBI CACGTC 1 cut(s) 1323
BmgT120I GGNCC 1 cut(s) 1037
BmiI GGNNCC 1 cut(s) 145
BmsI GCATC 5 cut(s) 356, 681, 1121, 1259, 1326
BpiI GAAGAC 1 cut(s) 472
BpmI CTGGAG 1 cut(s) 202
BpuEI CTTGAG 3 cut(s) 388, 1127, 1226
BsaBI GATNNNNATC 1 cut(s) 411
BsaJI CCNNGG 1 cut(s) 147
BsaXI ACNNNNNCTCC 4 cut(s) 143, 173, 981, 1011
Bsc4I CCNNNNNNNGG 1 cut(s) 1203
Bse118I RCCGGY 1 cut(s) 1196
Bse1I ACTGG 3 cut(s) 185, 494, 1318
Bse21I CCTNAGG 1 cut(s) 713
Bse8I GATNNNNATC 1 cut(s) 411
BseDI CCNNGG 1 cut(s) 147
BseGI GGATG 2 cut(s) 379, 1112
BseJI GATNNNNATC 1 cut(s) 411
BseLI CCNNNNNNNGG 1 cut(s) 1203
BseMII CTCAG 3 cut(s) 484, 727, 1287
BseNI ACTGG 3 cut(s) 185, 494, 1318
BseRI GAGGAG 1 cut(s) 1130
BseSI GKGCMC 4 cut(s) 378, 530, 905, 973
BseXI GCAGC 2 cut(s) 295, 298
BshFI GGCC 5 cut(s) 5, 163, 197, 1038, 1196
BsiHKAI GWGCWC 1 cut(s) 973
BsiHKCI CYCGRG 1 cut(s) 615
BsiSI CCGG 2 cut(s) 164, 1197
BslFI GGGAC 2 cut(s) 251, 1221
BslI CCNNNNNNNGG 1 cut(s) 1203
BsmAI GTCTC 3 cut(s) 146, 178, 569
BsmFI GGGAC 2 cut(s) 251, 1221
BsnI GGCC 5 cut(s) 5, 163, 197, 1038, 1196
BsoBI CYCGRG 1 cut(s) 615
Bsp1286I GDGCHC 4 cut(s) 378, 530, 905, 973
Bsp1407I TGTACA 1 cut(s) 876
Bsp143I GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
BspACI CCGC 1 cut(s) 106
BspANI GGCC 5 cut(s) 5, 163, 197, 1038, 1196
BspCNI CTCAG 3 cut(s) 483, 726, 1286
BspLI GGNNCC 1 cut(s) 145
BspPI GGATC 3 cut(s) 226, 458, 1021
BsrFI RCCGGY 1 cut(s) 1196
BsrGI TGTACA 1 cut(s) 876
BsrI ACTGG 3 cut(s) 185, 494, 1318
BssAI RCCGGY 1 cut(s) 1196
BssECI CCNNGG 1 cut(s) 147
BssMI GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
BssSI CACGAG 2 cut(s) 627, 887
Bst2BI CACGAG 2 cut(s) 627, 887
Bst4CI ACNGT 7 cut(s) 157, 202, 235, 502, 831, 997, 1212
Bst6I CTCTTC 4 cut(s) 524, 567, 779, 824
BstAPI GCANNNNNTGC 1 cut(s) 968
BstAUI TGTACA 1 cut(s) 876
BstC8I GCNNGC 3 cut(s) 195, 868, 1198
BstDEI CTNAG 3 cut(s) 470, 713, 1273
BstDSI CCRYGG 1 cut(s) 147
BstF5I GGATG 2 cut(s) 379, 1112
BstKTI GATC 6 cut(s) 88, 221, 415, 453, 886, 1016
BstMAI GTCTC 3 cut(s) 146, 178, 569
BstMBI GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
BstMWI GCNNNNNNNGC 3 cut(s) 11, 938, 968
BstSFI CTRYAG 2 cut(s) 837, 1375
BstSLI GKGCMC 4 cut(s) 378, 530, 905, 973
BstV1I GCAGC 2 cut(s) 295, 298
BstV2I GAAGAC 1 cut(s) 472
BstX2I RGATCY 1 cut(s) 1013
BstXI CCANNNNNNTGG 1 cut(s) 1303
BstYI RGATCY 1 cut(s) 1013
Bsu36I CCTNAGG 1 cut(s) 713
BsuRI GGCC 5 cut(s) 5, 163, 197, 1038, 1196
BtgI CCRYGG 1 cut(s) 147
BtrI CACGTC 1 cut(s) 1323
BtsCI GGATG 2 cut(s) 379, 1112
BtsIMutI CAGTG 7 cut(s) 162, 207, 360, 478, 498, 993, 1311
Cac8I GCNNGC 3 cut(s) 195, 868, 1198
Cfr10I RCCGGY 1 cut(s) 1196
Cfr13I GGNCC 1 cut(s) 1037
Csp6I GTAC 5 cut(s) 361, 395, 801, 877, 1171
CspCI CAANNNNNGTGG 2 cut(s) 187, 222
CviAII CATG 5 cut(s) 436, 442, 608, 804, 942
CviQI GTAC 5 cut(s) 361, 395, 801, 877, 1171
DdeI CTNAG 3 cut(s) 470, 713, 1273
DpnI GATC 6 cut(s) 87, 220, 414, 452, 885, 1015
DpnII GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
DraIII CACNNNGTG 1 cut(s) 461
EaeI YGGCCR 4 cut(s) 3, 161, 195, 1194
Eam1104I CTCTTC 4 cut(s) 524, 567, 779, 824
EarI CTCTTC 4 cut(s) 524, 567, 779, 824
Eco81I CCTNAGG 1 cut(s) 713
Eco88I CYCGRG 1 cut(s) 615
FaeI CATG 5 cut(s) 439, 445, 611, 807, 945
FalI AAGNNNNNCTT 3 cut(s) 35, 529, 561
FaqI GGGAC 2 cut(s) 251, 1221
FatI CATG 5 cut(s) 435, 441, 607, 803, 941
FauI CCCGC 1 cut(s) 113
FauNDI CATATG 1 cut(s) 1162
FbaI TGATCA 1 cut(s) 85
Fnu4HI GCNGC 2 cut(s) 309, 312
FokI GGATG 2 cut(s) 366, 1099
Fsp4HI GCNGC 2 cut(s) 309, 312
FspBI CTAG 5 cut(s) 737, 1049, 1077, 1179, 1290
GluI GCNGC 2 cut(s) 309, 312
GsuI CTGGAG 1 cut(s) 202
HaeIII GGCC 5 cut(s) 5, 163, 197, 1038, 1196
HapII CCGG 2 cut(s) 164, 1197
Hin1II CATG 5 cut(s) 439, 445, 611, 807, 945
HincII GTYRAC 1 cut(s) 622
HindII GTYRAC 1 cut(s) 622
HinfI GANTC 3 cut(s) 623, 917, 946
HpaII CCGG 2 cut(s) 164, 1197
HphI GGTGA 2 cut(s) 68, 739
Hpy166II GTNNAC 2 cut(s) 622, 971
Hpy188III TCNNGA 3 cut(s) 778, 887, 1243
Hpy8I GTNNAC 2 cut(s) 622, 971
Hpy99I CGWCG 1 cut(s) 1327
HpyAV CCTTC 3 cut(s) 25, 29, 562
HpyCH4III ACNGT 7 cut(s) 157, 202, 235, 502, 831, 997, 1212
HpyCH4IV ACGT 1 cut(s) 1322
HpyCH4V TGCA 7 cut(s) 136, 347, 694, 798, 941, 971, 1082
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 938, 968
HpyF3I CTNAG 3 cut(s) 470, 713, 1273
HpySE526I ACGT 1 cut(s) 1322
Hsp92II CATG 5 cut(s) 439, 445, 611, 807, 945
KroI GCCGGC 1 cut(s) 1196
KroNI GCCGGC 1 cut(s) 1198
Ksp22I TGATCA 1 cut(s) 85
Kzo9I GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
LmnI GCTCC 1 cut(s) 143
Lsp1109I GCAGC 2 cut(s) 295, 298
LweI GCATC 5 cut(s) 356, 681, 1121, 1259, 1326
MaeI CTAG 5 cut(s) 737, 1049, 1077, 1179, 1290
MaeII ACGT 1 cut(s) 1322
MaeIII GTNAC 2 cut(s) 1231, 1309
MalI GATC 6 cut(s) 87, 220, 414, 452, 885, 1015
MboI GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
MfeI CAATTG 1 cut(s) 936
MflI RGATCY 1 cut(s) 1013
MhlI GDGCHC 4 cut(s) 378, 530, 905, 973
MlsI TGGCCA 2 cut(s) 5, 197
MluCI AATT 7 cut(s) 121, 593, 642, 741, 910, 921, 936
MluNI TGGCCA 2 cut(s) 5, 197
MlyI GAGTC 2 cut(s) 617, 940
Mox20I TGGCCA 2 cut(s) 5, 197
MroNI GCCGGC 1 cut(s) 1196
MroXI GAANNNNTTC 1 cut(s) 14
MscI TGGCCA 2 cut(s) 5, 197
MseI TTAA 3 cut(s) 177, 584, 665
MslI CAYNNNNRTG 4 cut(s) 81, 355, 440, 1301
Msp20I TGGCCA 2 cut(s) 5, 197
MspI CCGG 2 cut(s) 164, 1197
MunI CAATTG 1 cut(s) 936
MwoI GCNNNNNNNGC 3 cut(s) 11, 938, 968
NaeI GCCGGC 1 cut(s) 1198
NdeI CATATG 1 cut(s) 1162
NdeII GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
NgoMIV GCCGGC 1 cut(s) 1196
NlaIII CATG 5 cut(s) 439, 445, 611, 807, 945
NlaIV GGNNCC 1 cut(s) 145
NmuCI GTSAC 1 cut(s) 1309
PaeR7I CTCGAG 1 cut(s) 615
PdiI GCCGGC 1 cut(s) 1198
PdmI GAANNNNTTC 1 cut(s) 14
PfeI GAWTC 1 cut(s) 917
PkrI GCNGC 2 cut(s) 310, 313
PleI GAGTC 2 cut(s) 617, 940
PpsI GAGTC 2 cut(s) 617, 940
PspN4I GGNNCC 1 cut(s) 145
PspPI GGNCC 1 cut(s) 1037
PspXI VCTCGAGB 1 cut(s) 615
PsuI RGATCY 1 cut(s) 1013
RsaI GTAC 5 cut(s) 362, 396, 802, 878, 1172
RsaNI GTAC 5 cut(s) 361, 395, 801, 877, 1171
RseI CAYNNNNRTG 4 cut(s) 81, 355, 440, 1301
SaqAI TTAA 3 cut(s) 177, 584, 665
SatI GCNGC 2 cut(s) 309, 312
Sau3AI GATC 6 cut(s) 85, 218, 412, 450, 883, 1013
Sau96I GGNCC 1 cut(s) 1037
SchI GAGTC 2 cut(s) 617, 940
SduI GDGCHC 4 cut(s) 378, 530, 905, 973
SfaNI GCATC 5 cut(s) 356, 681, 1121, 1259, 1326
SfcI CTRYAG 2 cut(s) 837, 1375
Sfr274I CTCGAG 1 cut(s) 615
SlaI CTCGAG 1 cut(s) 615
SmiMI CAYNNNNRTG 4 cut(s) 81, 355, 440, 1301
SmlI CTYRAG 4 cut(s) 367, 615, 1142, 1241
SmoI CTYRAG 4 cut(s) 367, 615, 1142, 1241
SpeI ACTAGT 1 cut(s) 1178
Sse9I AATT 7 cut(s) 121, 593, 642, 741, 910, 921, 936
SsiI CCGC 1 cut(s) 106
SspI AATATT 1 cut(s) 699
SspMI CTAG 5 cut(s) 737, 1049, 1077, 1179, 1290
TaaI ACNGT 7 cut(s) 157, 202, 235, 502, 831, 997, 1212
TaiI ACGT 1 cut(s) 1325
TaqI TCGA 2 cut(s) 616, 1325
TasI AATT 7 cut(s) 121, 593, 642, 741, 910, 921, 936
TatI WGTACW 2 cut(s) 800, 876
TfiI GAWTC 1 cut(s) 917
Tru1I TTAA 3 cut(s) 177, 584, 665
Tru9I TTAA 3 cut(s) 177, 584, 665
TscAI CASTG 7 cut(s) 162, 207, 360, 478, 505, 1000, 1318
TseFI GTSAC 1 cut(s) 1309
TseI GCWGC 2 cut(s) 308, 311
Tsp45I GTSAC 1 cut(s) 1309
TspDTI ATGAA 3 cut(s) 522, 624, 876
TspGWI ACGGA 1 cut(s) 164
TspRI CASTG 7 cut(s) 162, 207, 360, 478, 505, 1000, 1318
VneI GTGCAC 1 cut(s) 969
XapI RAATTY 1 cut(s) 910
XhoI CTCGAG 1 cut(s) 615
XmnI GAANNNNTTC 1 cut(s) 14
XspI CTAG 5 cut(s) 737, 1049, 1077, 1179, 1290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.