Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0008550

Physical Location & Seq

Genomic Coordinates Reverse (-)

15722720 .. 15725285

Gene Structure 2566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1102200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGAAAGTCCGACTCTAACCGGATTGCTGAAGCAGGTGGCGTCGGGGTTCCCGAACCACCGCGCCCTTTCCGTTTCCGGAAAGTTCGACTTGACCCATGCGCGCTTGCAGGAGCTGGTCGACCACGCCGCCTCCCTCTTAATCGCCTCCGGCATCGCCCCAAATGACACCGTCGCACTCACCTTCCCCAACACCGTCGAGTTTGTTGTGATGTTTTTGGCGGTGATTCGGTGCCGAGCGACAGCGGCGCCGCTGAACGCGGTGTACACGGCGGAGGAGTTCGAGTTCTACCTCTCCGACTCGGAATCGAAGCTCCTGATCACGCCGGAAAAACCGATTCATGCGGCCCAAGCGGCGGCTTCCAAGCTCAACATCCCTCACGTCACCGCCAACCTTTCTGACGCCGCCAGCCACGTCACACTCTCTTCCGCCGCCGAGGGGAGCCCCGACTCGGTCTCGCAACTCGTCAACGAGCCCTCCGACGTGGCGCTCTTCCTTCACACGTCGGGGACTACGAGCCGGCCCAAGGGAGTGCCCTTGACGCAGCTCAATTTGGCCTCCTCGGTCCAGAACATCAAATCGGTCTACAAACTCACTGAGTCGGACTCGACGGTTATCGTCCTCCCTCTGTTTCACGTGCACGGATTAATTGCCGGGTTACTTAGTTCATTTTCCGCAGGAGCCGCCGCGACTCTCCCAGCCGCTGGCCGATTCTCCGCCTCGACGTTTTGGTCCGACATGGTCACATACAACGCCACGTGGTACACCGCGGTCCCCACCATCCACCAAATCATCCTCGACCGCCACAGCAGCAAACCCGAACCGCAATACCCGAAGCTCCGGTTTATCCGGACCTGCAGCGCCTCGCTGGCTCCGTCGATATTGGCGCGGCTTGAAGAATCGTTCGGCGCTCCGGTCTTGGAGGCTTACGCGATGACAGAGGCGTCCCATTTGATGTGTTCAAATCCGTTGCCGGAAGACGGGGCCCACAAGCCCGGGTCGGTGGGTCGACCCGTGGGTCAGGAGCTTGCGATTTTGGACGAAAACGGTTCGGCTCAGCCGGAGGGGGTGAACGGCGAGGTTTGCATCAGAGGACCCAATGTGACTAAAGGGTATAAGAACAACCCGGAAGCGAACAAAGCGGCTTTCTTGTTCGGGTGGTTTCATACGGGGGATATCGGAGTTTTGGACTCCGATGGGTATTTGAGCCTCGTGGGTCGGATTAAGGAGCTGATTAATCGCGGAGGGGAAAAGATATCGCCGATTGAAGTCGATGCAGTACTTTTGTCACATCCAGAGGTCGCCCAAGGCGTTGCATTTGGAGTTCCTGATGATAAATATGGCGAAGAGATTAATTGTGCCATAATCCCAAGAGAAGGCTCAAGCTTGGAAGAGGAAGAAGTGATGCGACATTGCAAGAAGAATCTGGCTTCATTCAAAGTACCCAAGAAGGTGTTCATCACCGAGTCTCTTCCGAAAACCGCAACCGGAAAAATCCAACGCCGGATCGTGGCAGAGCACTTCCTTGCTCAAATCTCCACCGCCAAAGTTCCCAAATTTGGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00630 ko01100 map00630 map01100

Pfam Domains

Protein Families

AMP-binding AMP-binding_C Pkinase

Protein Analysis

523

Amino Acids

55.81

Weight (kDa)

6.03

Isoelectric Point (pI)

34.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	11 - 372	1.1e-82	AMP-binding enzyme
AMP-binding_C	PF13193	423 - 498	5.4e-18	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48990
fragaria_vesca	FvH4_5g02080 FvH4_5g02080 FvH4_5g02080 FvH4_5g02080 FvH4_5g02080
malus_domestica	MD06G1079100.v1.1 MD14G1102200.v1.1
prunus_persica	Prupe.5G097700_v2.0.a1 Prupe.5G097700_v2.0.a1 Prupe.5G097700_v2.0.a1
pyrus_communis	pycom06g07620 pycom14g09880
rosa_chinensis	RchiOBHm_Chr7g0198211
rosa_laevigata	RLG00000003884
rosa_multiflora	Rmu_sc0011520.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257930
rosa_rugosa	Rorug07G0046000
rosa_samantha	Rh7AG169500 Rh7BG172700 Rh7CG179200 Rh7DG172000
rosa_wichuraiana	Rw7G014820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	25
AasI	GACNNNNNNGTC	3 cut(s)	730, 943, 1017
Acc36I	ACCTGC	2 cut(s)	25, 863
AccB1I	GGYRCC	2 cut(s)	231, 247
AccB7I	CCANNNNNTGG	1 cut(s)	704
AccI	GTMKAC	3 cut(s)	120, 585, 1009
AccII	CGCG	8 cut(s)	63, 103, 260, 689, 770, 889, 932, 1242
AccIII	TCCGGA	2 cut(s)	77, 849
AclWI	GGATC	1 cut(s)	1514
AcoI	YGGCCR	1 cut(s)	706
AcsI	RAATTY	1 cut(s)	1556
AcuI	CTGAAG	1 cut(s)	50
AcvI	CACGTG	2 cut(s)	637, 759
AcyI	GRCGYC	4 cut(s)	41, 248, 402, 944
AfaI	GTAC	4 cut(s)	266, 764, 1281, 1443
AfiI	CCNNNNNNNGG	9 cut(s)	355, 438, 451, 526, 704, 980, 1376, 1510, 1559
AflIII	ACRYGT	1 cut(s)	501
AgsI	TTSAA	4 cut(s)	896, 963, 1268, 1438
AjiI	CACGTC	4 cut(s)	382, 415, 484, 504
AjuI	GAANNNNNNNTTGG	2 cut(s)	1439, 1471
AloI	GAACNNNNNNTCC	2 cut(s)	269, 301
AluBI	AGCT	8 cut(s)	115, 313, 367, 547, 838, 1027, 1231, 1386
AluI	AGCT	8 cut(s)	115, 313, 367, 547, 838, 1027, 1231, 1386
Alw21I	GWGCWC	2 cut(s)	642, 1521
Alw26I	GTCTC	2 cut(s)	460, 1473
Alw44I	GTGCAC	1 cut(s)	638
AlwI	GGATC	1 cut(s)	1514
AlwNI	CAGNNNCTG	2 cut(s)	115, 704
Ama87I	CYCGRG	1 cut(s)	995
Aor13HI	TCCGGA	2 cut(s)	77, 849
AoxI	GGCC	5 cut(s)	345, 521, 555, 706, 984
ApaI	GGGCCC	1 cut(s)	988
ApaLI	GTGCAC	1 cut(s)	638
ApeKI	GCWGC	3 cut(s)	544, 810, 858
ApoI	RAATTY	1 cut(s)	1556
AseI	ATTAAT	3 cut(s)	647, 1236, 1353
Asp700I	GAANNNNTTC	1 cut(s)	1454
AspLEI	GCGC	8 cut(s)	65, 103, 105, 250, 490, 863, 889, 911
AspS9I	GGNCC	9 cut(s)	346, 522, 565, 732, 772, 852, 984, 985, 1094
AsuC2I	CCSGG	4 cut(s)	655, 996, 997, 1127
AsuHPI	GGTGA	5 cut(s)	172, 235, 376, 1081, 1453
AvaI	CYCGRG	1 cut(s)	995
AvaII	GGWCC	5 cut(s)	565, 732, 772, 852, 1094
BaeGI	GKGCMC	3 cut(s)	537, 642, 988
BanI	GGYRCC	2 cut(s)	231, 247
BanII	GRGCYC	3 cut(s)	446, 477, 988
BauI	CACGAG	1 cut(s)	1211
BbrPI	CACGTG	2 cut(s)	637, 759
BbsI	GAAGAC	1 cut(s)	984
Bbv12I	GWGCWC	2 cut(s)	642, 1521
BbvI	GCAGC	3 cut(s)	556, 822, 870
BccI	CCATC	2 cut(s)	788, 1190
BceAI	ACGGC	2 cut(s)	285, 1090
BclI	TGATCA	1 cut(s)	318
BcnI	CCSGG	4 cut(s)	655, 996, 997, 1127
BcoDI	GTCTC	2 cut(s)	460, 1473
BfmI	CTRYAG	1 cut(s)	856
BfoI	RGCGCY	4 cut(s)	251, 491, 864, 912
BfuAI	ACCTGC	2 cut(s)	25, 863
BglI	GCCNNNNNGGC	2 cut(s)	353, 869
BlpI	GCTNAGC	1 cut(s)	1056
BmcAI	AGTACT	1 cut(s)	1281
Bme1390I	CCNGG	4 cut(s)	655, 996, 997, 1127
Bme18I	GGWCC	5 cut(s)	565, 732, 772, 852, 1094
BmeT110I	CYCGRG	1 cut(s)	995
BmgBI	CACGTC	4 cut(s)	382, 415, 484, 504
BmgT120I	GGNCC	9 cut(s)	346, 522, 565, 732, 772, 852, 984, 985, 1094
BmrFI	CCNGG	4 cut(s)	655, 996, 997, 1127
BmsI	GCATC	4 cut(s)	162, 1095, 1264, 1395
BpiI	GAAGAC	1 cut(s)	984
BplI	GAGNNNNNCTC	2 cut(s)	590, 622
Bpu1102I	GCTNAGC	1 cut(s)	1056
BpuEI	CTTGAG	1 cut(s)	1366
BpuMI	CCSGG	4 cut(s)	655, 996, 997, 1127
BsaAI	YACGTR	2 cut(s)	637, 759
BsaHI	GRCGYC	4 cut(s)	41, 248, 402, 944
BsaI	GGTCTC	1 cut(s)	460
BsaJI	CCNNGG	7 cut(s)	435, 525, 561, 768, 995, 1014, 1306
BsaWI	WCCGGW	6 cut(s)	20, 77, 840, 849, 913, 1487
BsaXI	ACNNNNNCTCC	6 cut(s)	116, 146, 269, 299, 461, 491
Bsc4I	CCNNNNNNNGG	9 cut(s)	355, 438, 451, 526, 704, 980, 1376, 1510, 1559
Bse118I	RCCGGY	1 cut(s)	519
Bse3DI	GCAATG	1 cut(s)	1411
BseAI	TCCGGA	2 cut(s)	77, 849
BseDI	CCNNGG	7 cut(s)	435, 525, 561, 768, 995, 1014, 1306
BseGI	GGATG	4 cut(s)	372, 780, 792, 1291
BseLI	CCNNNNNNNGG	9 cut(s)	355, 438, 451, 526, 704, 980, 1376, 1510, 1559
BseMI	GCAATG	1 cut(s)	1411
BseMII	CTCAG	2 cut(s)	588, 1070
BsePI	GCGCGC	1 cut(s)	101
BseRI	GAGGAG	2 cut(s)	290, 550
BseSI	GKGCMC	3 cut(s)	537, 642, 988
BseXI	GCAGC	3 cut(s)	556, 822, 870
BseYI	CCCAGC	1 cut(s)	697
Bsh1236I	CGCG	8 cut(s)	63, 103, 260, 689, 770, 889, 932, 1242
Bsh1285I	CGRYCG	1 cut(s)	802
BshFI	GGCC	5 cut(s)	347, 523, 557, 708, 986
BshNI	GGYRCC	2 cut(s)	231, 247
BsiEI	CGRYCG	1 cut(s)	802
BsiHKAI	GWGCWC	2 cut(s)	642, 1521
BsiHKCI	CYCGRG	1 cut(s)	995
BslFI	GGGAC	3 cut(s)	523, 758, 931
BslI	CCNNNNNNNGG	9 cut(s)	355, 438, 451, 526, 704, 980, 1376, 1510, 1559
BsmAI	GTCTC	2 cut(s)	460, 1473
BsmFI	GGGAC	3 cut(s)	523, 758, 931
BsnI	GGCC	5 cut(s)	347, 523, 557, 708, 986
Bso31I	GGTCTC	1 cut(s)	460
BsoBI	CYCGRG	1 cut(s)	995
Bsp120I	GGGCCC	1 cut(s)	984
Bsp1286I	GDGCHC	6 cut(s)	446, 477, 537, 642, 988, 1521
Bsp13I	TCCGGA	2 cut(s)	77, 849
Bsp1407I	TGTACA	1 cut(s)	264
Bsp143I	GATC	2 cut(s)	318, 1506
Bsp1720I	GCTNAGC	1 cut(s)	1056
BspANI	GGCC	5 cut(s)	347, 523, 557, 708, 986
BspCNI	CTCAG	2 cut(s)	589, 1069
BspEI	TCCGGA	2 cut(s)	77, 849
BspFNI	CGCG	8 cut(s)	63, 103, 260, 689, 770, 889, 932, 1242
BspMAI	CTGCAG	1 cut(s)	860
BspMI	ACCTGC	2 cut(s)	25, 863
BspPI	GGATC	1 cut(s)	1514
BspQI	GCTCTTC	1 cut(s)	497
BspT107I	GGYRCC	2 cut(s)	231, 247
BspTNI	GGTCTC	1 cut(s)	460
BsrDI	GCAATG	1 cut(s)	1411
BsrFI	RCCGGY	1 cut(s)	519
BsrGI	TGTACA	1 cut(s)	264
BssAI	RCCGGY	1 cut(s)	519
BssECI	CCNNGG	7 cut(s)	435, 525, 561, 768, 995, 1014, 1306
BssHII	GCGCGC	1 cut(s)	101
BssMI	GATC	2 cut(s)	318, 1506
BssNI	GRCGYC	4 cut(s)	41, 248, 402, 944
BssSI	CACGAG	1 cut(s)	1211
BssT1I	CCWWGG	2 cut(s)	525, 1306
Bst2BI	CACGAG	1 cut(s)	1211
Bst4CI	ACNGT	4 cut(s)	172, 196, 613, 1049
Bst6I	CTCTTC	5 cut(s)	430, 497, 1341, 1386, 1476
BstACI	GRCGYC	4 cut(s)	41, 248, 402, 944
BstAUI	TGTACA	1 cut(s)	264
BstBAI	YACGTR	2 cut(s)	637, 759
BstC8I	GCNNGC	7 cut(s)	103, 107, 409, 521, 706, 870, 1029
BstDEI	CTNAG	3 cut(s)	597, 662, 1056
BstDSI	CCRYGG	2 cut(s)	768, 1014
BstF5I	GGATG	4 cut(s)	372, 780, 792, 1291
BstFNI	CGCG	8 cut(s)	63, 103, 260, 689, 770, 889, 932, 1242
BstH2I	RGCGCY	4 cut(s)	251, 491, 864, 912
BstHHI	GCGC	8 cut(s)	65, 103, 105, 250, 490, 863, 889, 911
BstKTI	GATC	2 cut(s)	321, 1509
BstMAI	GTCTC	2 cut(s)	460, 1473
BstMBI	GATC	2 cut(s)	318, 1506
BstMCI	CGRYCG	1 cut(s)	802
BstMWI	GCNNNNNNNGC	9 cut(s)	245, 350, 353, 541, 683, 810, 869, 1083, 1139
BstSCI	CCNGG	4 cut(s)	653, 994, 995, 1125
BstSFI	CTRYAG	1 cut(s)	856
BstSLI	GKGCMC	3 cut(s)	537, 642, 988
BstUI	CGCG	8 cut(s)	63, 103, 260, 689, 770, 889, 932, 1242
BstV1I	GCAGC	3 cut(s)	556, 822, 870
BstV2I	GAAGAC	1 cut(s)	984
BsuRI	GGCC	5 cut(s)	347, 523, 557, 708, 986
BtgI	CCRYGG	2 cut(s)	768, 1014
BtgZI	GCGATG	2 cut(s)	139, 947
BtrI	CACGTC	4 cut(s)	382, 415, 484, 504
BtsCI	GGATG	4 cut(s)	372, 780, 792, 1291
BtsIMutI	CAGTG	1 cut(s)	594
BveI	ACCTGC	2 cut(s)	25, 863
Cac8I	GCNNGC	7 cut(s)	103, 107, 409, 521, 706, 870, 1029
CaiI	CAGNNNCTG	2 cut(s)	115, 704
CfoI	GCGC	8 cut(s)	65, 103, 105, 250, 490, 863, 889, 911
Cfr10I	RCCGGY	1 cut(s)	519
Cfr13I	GGNCC	9 cut(s)	346, 522, 565, 732, 772, 852, 984, 985, 1094
Cfr42I	CCGCGG	1 cut(s)	771
Cfr9I	CCCGGG	1 cut(s)	995
CseI	GACGC	4 cut(s)	30, 410, 550, 933
Csp6I	GTAC	4 cut(s)	265, 763, 1280, 1442
CviAII	CATG	3 cut(s)	98, 341, 739
CviQI	GTAC	4 cut(s)	265, 763, 1280, 1442
DdeI	CTNAG	3 cut(s)	597, 662, 1056
DinI	GGCGCC	1 cut(s)	249
DpnI	GATC	2 cut(s)	320, 1508
DpnII	GATC	2 cut(s)	318, 1506
DrdI	GACNNNNNNGTC	3 cut(s)	730, 943, 1017
DseDI	GACNNNNNNGTC	3 cut(s)	730, 943, 1017
EaeI	YGGCCR	1 cut(s)	706
Eam1104I	CTCTTC	5 cut(s)	430, 497, 1341, 1386, 1476
EarI	CTCTTC	5 cut(s)	430, 497, 1341, 1386, 1476
EciI	GGCGGA	3 cut(s)	287, 418, 706
Eco130I	CCWWGG	2 cut(s)	525, 1306
Eco24I	GRGCYC	3 cut(s)	446, 477, 988
Eco31I	GGTCTC	1 cut(s)	460
Eco32I	GATATC	2 cut(s)	1177, 1257
Eco47I	GGWCC	5 cut(s)	565, 732, 772, 852, 1094
Eco57I	CTGAAG	1 cut(s)	50
Eco72I	CACGTG	2 cut(s)	637, 759
Eco88I	CYCGRG	1 cut(s)	995
EcoO109I	RGGNCCY	2 cut(s)	984, 1094
EcoRV	GATATC	2 cut(s)	1177, 1257
EcoT14I	CCWWGG	2 cut(s)	525, 1306
EcoT38I	GRGCYC	3 cut(s)	446, 477, 988
EgeI	GGCGCC	1 cut(s)	249
EheI	GGCGCC	1 cut(s)	249
ErhI	CCWWGG	2 cut(s)	525, 1306
FaeI	CATG	3 cut(s)	101, 344, 742
FaiI	YATR	8 cut(s)	99, 342, 740, 748, 1116, 1167, 1341, 1364
FalI	AAGNNNNNCTT	2 cut(s)	74, 106
FaqI	GGGAC	3 cut(s)	523, 758, 931
FatI	CATG	3 cut(s)	97, 340, 738
FbaI	TGATCA	1 cut(s)	318
FblI	GTMKAC	3 cut(s)	120, 585, 1009
FokI	GGATG	4 cut(s)	359, 767, 779, 1278
FriOI	GRGCYC	3 cut(s)	446, 477, 988
GlaI	GCGC	8 cut(s)	64, 102, 104, 249, 489, 862, 888, 910
GsaI	CCCAGC	1 cut(s)	701
HaeII	RGCGCY	4 cut(s)	251, 491, 864, 912
HaeIII	GGCC	5 cut(s)	347, 523, 557, 708, 986
HgaI	GACGC	4 cut(s)	30, 410, 550, 933
HhaI	GCGC	8 cut(s)	65, 103, 105, 250, 490, 863, 889, 911
Hin1I	GRCGYC	4 cut(s)	41, 248, 402, 944
Hin1II	CATG	3 cut(s)	101, 344, 742
Hin6I	GCGC	8 cut(s)	63, 101, 103, 248, 488, 861, 887, 909
HinP1I	GCGC	8 cut(s)	63, 101, 103, 248, 488, 861, 887, 909
HincII	GTYRAC	3 cut(s)	121, 469, 1010
HindII	GTYRAC	3 cut(s)	121, 469, 1010
HindIII	AAGCTT	1 cut(s)	1384
HphI	GGTGA	5 cut(s)	172, 235, 376, 1081, 1453
Hpy166II	GTNNAC	9 cut(s)	121, 265, 267, 469, 586, 640, 765, 1010, 1072
Hpy188III	TCNNGA	8 cut(s)	52, 78, 316, 568, 850, 1022, 1295, 1328
Hpy8I	GTNNAC	9 cut(s)	121, 265, 267, 469, 586, 640, 765, 1010, 1072
Hpy99I	CGWCG	8 cut(s)	46, 176, 200, 485, 508, 613, 727, 880
HpyAV	CCTTC	4 cut(s)	193, 506, 1370, 1444
HpyCH4III	ACNGT	4 cut(s)	172, 196, 613, 1049
HpyCH4IV	ACGT	7 cut(s)	381, 414, 483, 503, 636, 725, 758
HpyCH4V	TGCA	7 cut(s)	109, 640, 858, 1086, 1277, 1316, 1416
HpyF10VI	GCNNNNNNNGC	9 cut(s)	245, 350, 353, 541, 683, 810, 869, 1083, 1139
HpyF3I	CTNAG	3 cut(s)	597, 662, 1056
HpySE526I	ACGT	7 cut(s)	381, 414, 483, 503, 636, 725, 758
Hsp92I	GRCGYC	4 cut(s)	41, 248, 402, 944
Hsp92II	CATG	3 cut(s)	101, 344, 742
HspAI	GCGC	8 cut(s)	63, 101, 103, 248, 488, 861, 887, 909
KasI	GGCGCC	1 cut(s)	247
Kpn2I	TCCGGA	2 cut(s)	77, 849
KroI	GCCGGC	1 cut(s)	519
KroNI	GCCGGC	1 cut(s)	521
Ksp22I	TGATCA	1 cut(s)	318
KspI	CCGCGG	1 cut(s)	771
Kzo9I	GATC	2 cut(s)	318, 1506
LguI	GCTCTTC	1 cut(s)	497
LmnI	GCTCC	9 cut(s)	112, 318, 441, 680, 843, 877, 916, 1024, 1228
Lsp1109I	GCAGC	3 cut(s)	556, 822, 870
LweI	GCATC	4 cut(s)	162, 1095, 1264, 1395
MaeII	ACGT	7 cut(s)	381, 414, 483, 503, 636, 725, 758
MaeIII	GTNAC	6 cut(s)	382, 415, 657, 742, 1102, 1287
MalI	GATC	2 cut(s)	320, 1508
MboI	GATC	2 cut(s)	318, 1506
MboII	GAAGA	9 cut(s)	417, 484, 908, 989, 1358, 1403, 1409, 1432, 1463
MhlI	GDGCHC	6 cut(s)	446, 477, 537, 642, 988, 1521
MluCI	AATT	4 cut(s)	550, 648, 1354, 1556
Mly113I	GGCGCC	1 cut(s)	248
MlyI	GAGTC	8 cut(s)	7, 293, 443, 599, 608, 685, 1184, 1475
MmeI	TCCRAC	7 cut(s)	35, 321, 504, 582, 759, 1199, 1522
MroI	TCCGGA	2 cut(s)	77, 849
MroNI	GCCGGC	1 cut(s)	519
MroXI	GAANNNNTTC	1 cut(s)	1454
MseI	TTAA	6 cut(s)	140, 647, 1224, 1236, 1353, 1567
MspA1I	CMGCKG	4 cut(s)	245, 253, 704, 770
MspR9I	CCNGG	4 cut(s)	655, 996, 997, 1127
MvnI	CGCG	8 cut(s)	63, 103, 260, 689, 770, 889, 932, 1242
MwoI	GCNNNNNNNGC	9 cut(s)	245, 350, 353, 541, 683, 810, 869, 1083, 1139
NaeI	GCCGGC	1 cut(s)	521
NarI	GGCGCC	1 cut(s)	248
NciI	CCSGG	4 cut(s)	655, 996, 997, 1127
NdeII	GATC	2 cut(s)	318, 1506
NgoMIV	GCCGGC	1 cut(s)	519
NlaIII	CATG	3 cut(s)	101, 344, 742
NmeAIII	GCCGAG	2 cut(s)	260, 460
NmuCI	GTSAC	5 cut(s)	382, 415, 742, 1102, 1287
PaqCI	CACCTGC	1 cut(s)	25
PauI	GCGCGC	1 cut(s)	101
PciSI	GCTCTTC	1 cut(s)	497
PcsI	WCGNNNNNNNCGW	5 cut(s)	50, 477, 512, 872, 1308
PdiI	GCCGGC	1 cut(s)	521
PdmI	GAANNNNTTC	1 cut(s)	1454
PfeI	GAWTC	6 cut(s)	226, 305, 337, 711, 899, 1423
PflFI	GACNNNGTC	3 cut(s)	170, 452, 740
PflMI	CCANNNNNTGG	1 cut(s)	704
PleI	GAGTC	8 cut(s)	7, 293, 443, 599, 607, 685, 1184, 1474
PluTI	GGCGCC	1 cut(s)	251
PmaCI	CACGTG	2 cut(s)	637, 759
PmlI	CACGTG	2 cut(s)	637, 759
PpsI	GAGTC	8 cut(s)	7, 293, 443, 599, 607, 685, 1184, 1474
Ppu21I	YACGTR	2 cut(s)	637, 759
PpuMI	RGGWCCY	1 cut(s)	1094
PshBI	ATTAAT	3 cut(s)	647, 1236, 1353
Psp5II	RGGWCCY	1 cut(s)	1094
PspCI	CACGTG	2 cut(s)	637, 759
PspFI	CCCAGC	1 cut(s)	697
PspOMI	GGGCCC	1 cut(s)	984
PspPI	GGNCC	9 cut(s)	346, 522, 565, 732, 772, 852, 984, 985, 1094
PspPPI	RGGWCCY	1 cut(s)	1094
PsrI	GAACNNNNNNTAC	2 cut(s)	248, 280
PstI	CTGCAG	1 cut(s)	860
PstNI	CAGNNNCTG	2 cut(s)	115, 704
PsyI	GACNNNGTC	3 cut(s)	170, 452, 740
PteI	GCGCGC	1 cut(s)	101
RsaI	GTAC	4 cut(s)	266, 764, 1281, 1443
RsaNI	GTAC	4 cut(s)	265, 763, 1280, 1442
SacII	CCGCGG	1 cut(s)	771
SalI	GTCGAC	2 cut(s)	119, 1008
SapI	GCTCTTC	1 cut(s)	497
SaqAI	TTAA	6 cut(s)	140, 647, 1224, 1236, 1353, 1567
Sau3AI	GATC	2 cut(s)	318, 1506
Sau96I	GGNCC	9 cut(s)	346, 522, 565, 732, 772, 852, 984, 985, 1094
ScaI	AGTACT	1 cut(s)	1281
SchI	GAGTC	8 cut(s)	7, 293, 443, 599, 608, 685, 1184, 1475
ScrFI	CCNGG	4 cut(s)	655, 996, 997, 1127
SduI	GDGCHC	6 cut(s)	446, 477, 537, 642, 988, 1521
SfaNI	GCATC	4 cut(s)	162, 1095, 1264, 1395
SfcI	CTRYAG	1 cut(s)	856
SfoI	GGCGCC	1 cut(s)	249
Sfr303I	CCGCGG	1 cut(s)	771
SgrBI	CCGCGG	1 cut(s)	771
SinI	GGWCC	5 cut(s)	565, 732, 772, 852, 1094
SmaI	CCCGGG	1 cut(s)	997
SmlI	CTYRAG	1 cut(s)	1381
SmoI	CTYRAG	1 cut(s)	1381
Sse9I	AATT	4 cut(s)	550, 648, 1354, 1556
SspDI	GGCGCC	1 cut(s)	247
StyD4I	CCNGG	4 cut(s)	653, 994, 995, 1125
StyI	CCWWGG	2 cut(s)	525, 1306
TaaI	ACNGT	4 cut(s)	172, 196, 613, 1049
TaiI	ACGT	7 cut(s)	384, 417, 486, 506, 639, 728, 761
TaqII	GACCGA	3 cut(s)	442, 553, 571
TasI	AATT	4 cut(s)	550, 648, 1354, 1556
TatI	WGTACW	2 cut(s)	264, 1279
TfiI	GAWTC	6 cut(s)	226, 305, 337, 711, 899, 1423
Tru1I	TTAA	6 cut(s)	140, 647, 1224, 1236, 1353, 1567
Tru9I	TTAA	6 cut(s)	140, 647, 1224, 1236, 1353, 1567
TscAI	CASTG	1 cut(s)	601
TseFI	GTSAC	5 cut(s)	382, 415, 742, 1102, 1287
TseI	GCWGC	3 cut(s)	544, 810, 858
Tsp45I	GTSAC	5 cut(s)	382, 415, 742, 1102, 1287
TspDTI	ATGAA	5 cut(s)	329, 657, 1154, 1422, 1447
TspGWI	ACGGA	4 cut(s)	61, 657, 864, 957
TspMI	CCCGGG	1 cut(s)	995
TspRI	CASTG	1 cut(s)	601
Tth111I	GACNNNGTC	3 cut(s)	170, 452, 740
Van91I	CCANNNNNTGG	1 cut(s)	704
VneI	GTGCAC	1 cut(s)	638
VpaK11BI	GGWCC	5 cut(s)	565, 732, 772, 852, 1094
VspI	ATTAAT	3 cut(s)	647, 1236, 1353
XapI	RAATTY	1 cut(s)	1556
XmaI	CCCGGG	1 cut(s)	995
XmiI	GTMKAC	3 cut(s)	120, 585, 1009
XmnI	GAANNNNTTC	1 cut(s)	1454
ZrmI	AGTACT	1 cut(s)	1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.