Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008550

Physical Location & Seq

Genomic Coordinates Forward (+)

14638513 .. 14641395

Gene Structure 2883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G014820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGAAAACCCGACCCTGACCGGTTTGTTGAAGAAGGTCGCCTCGGAATTCCCTAACCGCCGCGCTATTTCCGTTTCCGGCAAATTCGACTTGACCCATGCCCGATTACAGGAGCTCGTCGAGCACGCCGCCTCTCAATTACTCGCCGCCGGCATCGGTCCTCACGACACCGTCGCTCTCACCTTCCCCAACACCATTGAGTTTGTGGTGATGTTCTTGGCGGTGATACGGTGCCGAGCCACCGCCGCGCCGCTGAACGCGGCGTACACGGCGGAGGAGTTCGAGTTCTACCTCTCCGACTCCGAGTCGAAGCTTCTGATCACGGCGGAGAAGCCAATTCAGTCGGCTCTGACCGCCGCCTCCAAGCTCAGCATCCCTTACGTCACGGCGTCGCTGCCCGACTCCGCCGCACATATTTCTCTGTCTTCAACCACCACCGCCGGCAAGCCGAGTTGCGACTCGGTTTCGGAACTCGTTAACGACCCGTCCGACGTGGCACTCTTCCTCCACACGTCGGGGACCACGAGCCGGCCCAAGGGGGTTCCCCTGACCCAGCTCAATCTGGCCTCGTCGGTTCGGAACATCCGGTCGGTCTATAAACTCACCGAGTCGGACTCGACGGTGATCGTCCTGCCGTTGTTTCACGTGCACGGGTTAATCGCCGGGTTACTGAGTTCACTCACCGCCGGAGCGGCCGCGACGCTCCCCGCCGCCGGCCGATTCTCCGCTTCGACGTTTTGGTCAGACATGCTCGCATACAACGCCACGTGGTACACTGCGGTGCCCACCATCCACCAGATCATTCTCGACCGTCACGCCAACAAACCCGAACCGGCCTATCCGAAGCTCCGGTTTATCCGGAGCTGCAGCGCGTCGCTGGCACCGTCAATTTTGACGCGTTTGGAGGAGTCGTTCCGCGCGCCGGTGCTGGAGGCTTACGCGATGACGGAGGCGACCCATTTGATGTGTTCGAACCCGTTACCCGAAGACGGCGAGCACAAACCAGGGTCCGTCGGGATACCCGTGGGCCAGGAATTGGCCATCTTGAACGAGAACGGCGTCCTTCAGCCAAATGACGTCAGCGGCGAGGTGTGCATTAGGGGACCTAATGTGACAAAAGGGTATAAGAACAACCCGGAAGCAAACAAAGCGGCTTTCACATTCGGGTGGTTCCACACAGGAGATGTTGGGTTTTTGGACTCTGATGGGTACTTGCACCTTGTGGGTCGGATCAAGGAGCTCATTAACCGTGGAGGGGAGAAGATATCACCAATTGAAGTAGACGCAGTGCTCTTGTCACATCCCGAAATTGCTCAGGCAGTTTGTTTCGGAGTGCCTGATGATAAATATGGTGAAGAGATTAACTGTGCTATAATCCCAAGAGAAGGCTCAAGCATAGACGACGAAGAAGTGCTGCGTTTTTGCAAGAAGAATCTTGCAGCTTTCAAGGTGCCCAAGAGAGTGTTCATCACTGACTCGGTTCCGAAAACTGCAACAGGGAAGATCCAACGTCGCATTGTGGCAGAGCATTTCCTTGCTCAAATCTCCACTGCTAAGGTTCCCAAGTTTGGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00630 ko01100 map00630 map01100

Pfam Domains

Protein Families

AMP-binding AMP-binding_C Pkinase

Protein Analysis

525

Amino Acids

56.5

Weight (kDa)

6.22

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	11 - 375	5e-82	AMP-binding enzyme
AMP-binding_C	PF13193	426 - 501	6.7e-18	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48990
fragaria_vesca	FvH4_5g02080 FvH4_5g02080 FvH4_5g02080 FvH4_5g02080 FvH4_5g02080
malus_domestica	MD06G1079100.v1.1 MD14G1102200.v1.1
prunus_persica	Prupe.5G097700_v2.0.a1 Prupe.5G097700_v2.0.a1 Prupe.5G097700_v2.0.a1
pyrus_communis	pycom06g07620 pycom14g09880
rosa_chinensis	RchiOBHm_Chr7g0198211
rosa_laevigata	RLG00000003884
rosa_multiflora	Rmu_sc0011520.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257930
rosa_rugosa	Rorug07G0046000
rosa_samantha	Rh7AG169500 Rh7BG172700 Rh7CG179200 Rh7DG172000
rosa_wichuraiana	Rw7G014820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	739
AatII	GACGTC	1 cut(s)	1080
AccB1I	GGYRCC	4 cut(s)	231, 781, 880, 1450
AccB7I	CCANNNNNTGG	1 cut(s)	1036
AccBSI	CCGCTC	1 cut(s)	692
AccI	GTMKAC	1 cut(s)	1281
AccII	CGCG	9 cut(s)	63, 248, 260, 698, 872, 898, 918, 920, 941
AccIII	TCCGGA	1 cut(s)	858
AclWI	GGATC	2 cut(s)	1238, 1498
AcoI	YGGCCR	3 cut(s)	693, 715, 1038
AcsI	RAATTY	2 cut(s)	47, 83
AcuI	CTGAAG	1 cut(s)	1049
AcvI	CACGTG	2 cut(s)	646, 768
AcyI	GRCGYC	3 cut(s)	389, 1059, 1077
AdeI	CACNNNGTG	1 cut(s)	1222
AfaI	GTAC	3 cut(s)	266, 773, 1211
AflIII	ACRYGT	2 cut(s)	510, 896
AgeI	ACCGGT	1 cut(s)	20
AgsI	TTSAA	5 cut(s)	31, 429, 1048, 1277, 1447
AhdI	GACNNNNNGTC	1 cut(s)	304
AjiI	CACGTC	2 cut(s)	493, 513
AjnI	CCWGG	2 cut(s)	1003, 1029
AjuI	GAANNNNNNNTTGG	2 cut(s)	1448, 1480
AleI	CACNNNNGTG	1 cut(s)	779
AloI	GAACNNNNNNTCC	4 cut(s)	269, 301, 896, 928
AluBI	AGCT	8 cut(s)	115, 313, 367, 556, 847, 864, 1240, 1442
AluI	AGCT	8 cut(s)	115, 313, 367, 556, 847, 864, 1240, 1442
Alw21I	GWGCWC	6 cut(s)	117, 126, 651, 999, 1242, 1293
Alw44I	GTGCAC	1 cut(s)	647
AlwI	GGATC	2 cut(s)	1238, 1498
Aor13HI	TCCGGA	1 cut(s)	858
AoxI	GGCC	7 cut(s)	530, 564, 693, 715, 834, 1027, 1038
ApaLI	GTGCAC	1 cut(s)	647
ApeKI	GCWGC	5 cut(s)	394, 864, 867, 1414, 1439
ApoI	RAATTY	2 cut(s)	47, 83
AsiGI	ACCGGT	1 cut(s)	20
AspLEI	GCGC	5 cut(s)	65, 250, 872, 920, 922
AspS9I	GGNCC	6 cut(s)	158, 519, 531, 1008, 1027, 1103
AsuC2I	CCSGG	2 cut(s)	664, 1136
AsuHPI	GGTGA	8 cut(s)	172, 220, 235, 595, 634, 673, 1260, 1364
AsuII	TTCGAA	1 cut(s)	971
AvaII	GGWCC	4 cut(s)	158, 519, 1008, 1103
BaeGI	GKGCMC	3 cut(s)	651, 786, 1455
BalI	TGGCCA	1 cut(s)	1040
BanI	GGYRCC	4 cut(s)	231, 781, 880, 1450
BanII	GRGCYC	2 cut(s)	117, 1242
BauI	CACGAG	1 cut(s)	523
BbrPI	CACGTG	2 cut(s)	646, 768
BbsI	GAAGAC	2 cut(s)	417, 993
Bbv12I	GWGCWC	6 cut(s)	117, 126, 651, 999, 1242, 1293
BbvI	GCAGC	5 cut(s)	381, 851, 879, 1401, 1451
BccI	CCATC	3 cut(s)	797, 1049, 1199
BceAI	ACGGC	6 cut(s)	285, 339, 402, 619, 1006, 1072
BciT130I	CCWGG	2 cut(s)	1005, 1031
BciVI	GTATCC	1 cut(s)	1011
BclI	TGATCA	1 cut(s)	318
BcnI	CCSGG	2 cut(s)	664, 1136
BfmI	CTRYAG	1 cut(s)	865
BfuI	GTATCC	1 cut(s)	1011
BglI	GCCNNNNNGGC	1 cut(s)	692
BlpI	GCTNAGC	1 cut(s)	368
Bme1390I	CCNGG	4 cut(s)	664, 1005, 1031, 1136
Bme18I	GGWCC	4 cut(s)	158, 519, 1008, 1103
BmeRI	GACNNNNNGTC	1 cut(s)	304
BmgBI	CACGTC	2 cut(s)	493, 513
BmgT120I	GGNCC	6 cut(s)	158, 519, 531, 1008, 1027, 1103
BmrFI	CCNGG	4 cut(s)	664, 1005, 1031, 1136
BmsI	GCATC	2 cut(s)	162, 381
BpiI	GAAGAC	2 cut(s)	417, 993
BplI	GAGNNNNNCTC	2 cut(s)	599, 631
BpmI	CTGGAG	1 cut(s)	950
Bpu10I	CCTNAGC	2 cut(s)	1314, 1554
Bpu1102I	GCTNAGC	1 cut(s)	368
Bpu14I	TTCGAA	1 cut(s)	971
BpuEI	CTTGAG	1 cut(s)	1375
BpuMI	CCSGG	2 cut(s)	664, 1136
BsaAI	YACGTR	2 cut(s)	646, 768
BsaHI	GRCGYC	3 cut(s)	389, 1059, 1077
BsaJI	CCNNGG	5 cut(s)	42, 534, 1004, 1023, 1249
BsaWI	WCCGGW	4 cut(s)	20, 585, 849, 858
BsaXI	ACNNNNNCTCC	6 cut(s)	269, 299, 489, 519, 896, 926
Bse118I	RCCGGY	7 cut(s)	20, 149, 440, 528, 713, 832, 922
BseAI	TCCGGA	1 cut(s)	858
BseBI	CCWGG	2 cut(s)	1005, 1031
BseDI	CCNNGG	5 cut(s)	42, 534, 1004, 1023, 1249
BseGI	GGATG	4 cut(s)	372, 582, 789, 1300
BseMII	CTCAG	3 cut(s)	382, 662, 1328
BsePI	GCGCGC	1 cut(s)	918
BseRI	GAGGAG	2 cut(s)	290, 920
BseSI	GKGCMC	3 cut(s)	651, 786, 1455
BseX3I	CGGCCG	2 cut(s)	693, 715
BseXI	GCAGC	5 cut(s)	381, 851, 879, 1401, 1451
BseYI	CCCAGC	1 cut(s)	552
Bsh1236I	CGCG	9 cut(s)	63, 248, 260, 698, 872, 898, 918, 920, 941
Bsh1285I	CGRYCG	4 cut(s)	590, 696, 718, 811
BshFI	GGCC	7 cut(s)	532, 566, 695, 717, 836, 1029, 1040
BshNI	GGYRCC	4 cut(s)	231, 781, 880, 1450
BshTI	ACCGGT	1 cut(s)	20
BsiEI	CGRYCG	4 cut(s)	590, 696, 718, 811
BsiHKAI	GWGCWC	6 cut(s)	117, 126, 651, 999, 1242, 1293
BslFI	GGGAC	2 cut(s)	532, 1116
BsmFI	GGGAC	2 cut(s)	532, 1116
BsnI	GGCC	7 cut(s)	532, 566, 695, 717, 836, 1029, 1040
Bsp119I	TTCGAA	1 cut(s)	971
Bsp1286I	GDGCHC	8 cut(s)	117, 126, 651, 786, 999, 1242, 1293, 1455
Bsp13I	TCCGGA	1 cut(s)	858
Bsp143I	GATC	5 cut(s)	318, 624, 798, 1230, 1503
Bsp1720I	GCTNAGC	1 cut(s)	368
BspANI	GGCC	7 cut(s)	532, 566, 695, 717, 836, 1029, 1040
BspCNI	CTCAG	3 cut(s)	381, 663, 1327
BspEI	TCCGGA	1 cut(s)	858
BspFNI	CGCG	9 cut(s)	63, 248, 260, 698, 872, 898, 918, 920, 941
BspMAI	CTGCAG	1 cut(s)	869
BspPI	GGATC	2 cut(s)	1238, 1498
BspT104I	TTCGAA	1 cut(s)	971
BspT107I	GGYRCC	4 cut(s)	231, 781, 880, 1450
BsrBI	CCGCTC	1 cut(s)	692
BsrFI	RCCGGY	7 cut(s)	20, 149, 440, 528, 713, 832, 922
BssAI	RCCGGY	7 cut(s)	20, 149, 440, 528, 713, 832, 922
BssECI	CCNNGG	5 cut(s)	42, 534, 1004, 1023, 1249
BssHII	GCGCGC	1 cut(s)	918
BssMI	GATC	5 cut(s)	318, 624, 798, 1230, 1503
BssNI	GRCGYC	3 cut(s)	389, 1059, 1077
BssSI	CACGAG	1 cut(s)	523
BssT1I	CCWWGG	1 cut(s)	534
Bst2BI	CACGAG	1 cut(s)	523
Bst2UI	CCWGG	2 cut(s)	1005, 1031
Bst4CI	ACNGT	7 cut(s)	172, 231, 622, 812, 885, 1250, 1367
Bst6I	CTCTTC	2 cut(s)	506, 1350
BstACI	GRCGYC	3 cut(s)	389, 1059, 1077
BstBAI	YACGTR	2 cut(s)	646, 768
BstBI	TTCGAA	1 cut(s)	971
BstDEI	CTNAG	4 cut(s)	368, 671, 1314, 1554
BstDSI	CCRYGG	2 cut(s)	1023, 1249
BstF5I	GGATG	4 cut(s)	372, 582, 789, 1300
BstFNI	CGCG	9 cut(s)	63, 248, 260, 698, 872, 898, 918, 920, 941
BstHHI	GCGC	5 cut(s)	65, 250, 872, 920, 922
BstKTI	GATC	5 cut(s)	321, 627, 801, 1233, 1506
BstMBI	GATC	5 cut(s)	318, 624, 798, 1230, 1503
BstMCI	CGRYCG	4 cut(s)	590, 696, 718, 811
BstMWI	GCNNNNNNNGC	9 cut(s)	121, 245, 269, 353, 692, 761, 878, 1092, 1148
BstNI	CCWGG	2 cut(s)	1005, 1031
BstNSI	RCATGY	1 cut(s)	751
BstSCI	CCNGG	4 cut(s)	662, 1003, 1029, 1134
BstSFI	CTRYAG	1 cut(s)	865
BstSLI	GKGCMC	3 cut(s)	651, 786, 1455
BstUI	CGCG	9 cut(s)	63, 248, 260, 698, 872, 898, 918, 920, 941
BstV1I	GCAGC	5 cut(s)	381, 851, 879, 1401, 1451
BstV2I	GAAGAC	2 cut(s)	417, 993
BstX2I	RGATCY	1 cut(s)	1503
BstYI	RGATCY	1 cut(s)	1503
BstZI	CGGCCG	2 cut(s)	693, 715
BsuI	GTATCC	1 cut(s)	1011
BsuRI	GGCC	7 cut(s)	532, 566, 695, 717, 836, 1029, 1040
BtgI	CCRYGG	2 cut(s)	1023, 1249
BtgZI	GCGATG	1 cut(s)	956
BtrI	CACGTC	2 cut(s)	493, 513
BtsCI	GGATG	4 cut(s)	372, 582, 789, 1300
BtsI	GCAGTG	3 cut(s)	774, 1293, 1548
BtsIMutI	CAGTG	4 cut(s)	774, 1293, 1470, 1548
CciNI	GCGGCCGC	1 cut(s)	693
CfoI	GCGC	5 cut(s)	65, 250, 872, 920, 922
Cfr10I	RCCGGY	7 cut(s)	20, 149, 440, 528, 713, 832, 922
Cfr13I	GGNCC	6 cut(s)	158, 519, 531, 1008, 1027, 1103
CseI	GACGC	6 cut(s)	378, 709, 861, 904, 1048, 1292
Csp6I	GTAC	3 cut(s)	265, 772, 1210
CspAI	ACCGGT	1 cut(s)	20
CviAII	CATG	2 cut(s)	98, 748
CviQI	GTAC	3 cut(s)	265, 772, 1210
DdeI	CTNAG	4 cut(s)	368, 671, 1314, 1554
DpnI	GATC	5 cut(s)	320, 626, 800, 1232, 1505
DpnII	GATC	5 cut(s)	318, 624, 798, 1230, 1503
DraIII	CACNNNGTG	1 cut(s)	1222
DrdI	GACNNNNNNGTC	1 cut(s)	739
DriI	GACNNNNNGTC	1 cut(s)	304
DseDI	GACNNNNNNGTC	1 cut(s)	739
EaeI	YGGCCR	3 cut(s)	693, 715, 1038
EagI	CGGCCG	2 cut(s)	693, 715
Eam1104I	CTCTTC	2 cut(s)	506, 1350
Eam1105I	GACNNNNNGTC	1 cut(s)	304
EarI	CTCTTC	2 cut(s)	506, 1350
EciI	GGCGGA	3 cut(s)	287, 341, 394
Ecl136II	GAGCTC	2 cut(s)	115, 1240
EclXI	CGGCCG	2 cut(s)	693, 715
Eco130I	CCWWGG	1 cut(s)	534
Eco24I	GRGCYC	2 cut(s)	117, 1242
Eco32I	GATATC	1 cut(s)	1266
Eco47I	GGWCC	4 cut(s)	158, 519, 1008, 1103
Eco52I	CGGCCG	2 cut(s)	693, 715
Eco53kI	GAGCTC	2 cut(s)	115, 1240
Eco57I	CTGAAG	1 cut(s)	1049
Eco72I	CACGTG	2 cut(s)	646, 768
EcoICRI	GAGCTC	2 cut(s)	115, 1240
EcoO109I	RGGNCCY	1 cut(s)	1103
EcoRI	GAATTC	1 cut(s)	47
EcoRII	CCWGG	2 cut(s)	1003, 1029
EcoRV	GATATC	1 cut(s)	1266
EcoT14I	CCWWGG	1 cut(s)	534
EcoT38I	GRGCYC	2 cut(s)	117, 1242
ErhI	CCWWGG	1 cut(s)	534
FaeI	CATG	2 cut(s)	101, 751
FaiI	YATR	9 cut(s)	99, 414, 597, 749, 757, 1125, 1350, 1373, 1397
FaqI	GGGAC	2 cut(s)	532, 1116
FatI	CATG	2 cut(s)	97, 747
FauI	CCCGC	1 cut(s)	715
FbaI	TGATCA	1 cut(s)	318
FblI	GTMKAC	1 cut(s)	1281
FokI	GGATG	4 cut(s)	359, 569, 776, 1287
FriOI	GRGCYC	2 cut(s)	117, 1242
GlaI	GCGC	5 cut(s)	64, 249, 871, 919, 921
GsaI	CCCAGC	1 cut(s)	556
GsuI	CTGGAG	1 cut(s)	950
HaeIII	GGCC	7 cut(s)	532, 566, 695, 717, 836, 1029, 1040
HgaI	GACGC	6 cut(s)	378, 709, 861, 904, 1048, 1292
HhaI	GCGC	5 cut(s)	65, 250, 872, 920, 922
Hin1I	GRCGYC	3 cut(s)	389, 1059, 1077
Hin1II	CATG	2 cut(s)	101, 751
Hin6I	GCGC	5 cut(s)	63, 248, 870, 918, 920
HinP1I	GCGC	5 cut(s)	63, 248, 870, 918, 920
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HindIII	AAGCTT	1 cut(s)	311
HpaI	GTTAAC	1 cut(s)	478
HphI	GGTGA	8 cut(s)	172, 220, 235, 595, 634, 673, 1260, 1364
Hpy166II	GTNNAC	6 cut(s)	267, 478, 649, 677, 774, 1282
Hpy188III	TCNNGA	6 cut(s)	164, 806, 859, 1015, 1045, 1304
Hpy8I	GTNNAC	6 cut(s)	267, 478, 649, 677, 774, 1282
HpyAV	CCTTC	4 cut(s)	28, 193, 1073, 1379
HpyCH4III	ACNGT	7 cut(s)	172, 231, 622, 812, 885, 1250, 1367
HpyCH4IV	ACGT	8 cut(s)	381, 492, 512, 645, 734, 767, 1077, 1510
HpyCH4V	TGCA	7 cut(s)	649, 867, 1095, 1216, 1425, 1439, 1493
HpyF10VI	GCNNNNNNNGC	9 cut(s)	121, 245, 269, 353, 692, 761, 878, 1092, 1148
HpyF3I	CTNAG	4 cut(s)	368, 671, 1314, 1554
HpySE526I	ACGT	8 cut(s)	381, 492, 512, 645, 734, 767, 1077, 1510
Hsp92I	GRCGYC	3 cut(s)	389, 1059, 1077
Hsp92II	CATG	2 cut(s)	101, 751
HspAI	GCGC	5 cut(s)	63, 248, 870, 918, 920
Kpn2I	TCCGGA	1 cut(s)	858
KroI	GCCGGC	4 cut(s)	149, 440, 528, 713
KroNI	GCCGGC	4 cut(s)	151, 442, 530, 715
Ksp22I	TGATCA	1 cut(s)	318
KspAI	GTTAAC	1 cut(s)	478
Kzo9I	GATC	5 cut(s)	318, 624, 798, 1230, 1503
LmnI	GCTCC	6 cut(s)	112, 689, 708, 852, 861, 1237
Lsp1109I	GCAGC	5 cut(s)	381, 851, 879, 1401, 1451
LweI	GCATC	2 cut(s)	162, 381
MaeII	ACGT	8 cut(s)	381, 492, 512, 645, 734, 767, 1077, 1510
MaeIII	GTNAC	6 cut(s)	382, 666, 812, 978, 1111, 1296
MalI	GATC	5 cut(s)	320, 626, 800, 1232, 1505
MbiI	CCGCTC	1 cut(s)	692
MboI	GATC	5 cut(s)	318, 624, 798, 1230, 1503
MboII	GAAGA	9 cut(s)	43, 417, 493, 998, 1273, 1367, 1418, 1441, 1513
MfeI	CAATTG	1 cut(s)	1272
MflI	RGATCY	1 cut(s)	1503
MhlI	GDGCHC	8 cut(s)	117, 126, 651, 786, 999, 1242, 1293, 1455
MlsI	TGGCCA	1 cut(s)	1040
MluCI	AATT	8 cut(s)	47, 83, 137, 336, 888, 1034, 1272, 1308
MluI	ACGCGT	1 cut(s)	896
MluNI	TGGCCA	1 cut(s)	1040
MlyI	GAGTC	9 cut(s)	293, 314, 395, 452, 608, 617, 917, 1193, 1469
MmeI	TCCRAC	5 cut(s)	321, 513, 591, 1208, 1531
Mox20I	TGGCCA	1 cut(s)	1040
MroI	TCCGGA	1 cut(s)	858
MroNI	GCCGGC	4 cut(s)	149, 440, 528, 713
MscI	TGGCCA	1 cut(s)	1040
MseI	TTAA	5 cut(s)	477, 656, 1245, 1362, 1576
MslI	CAYNNNNRTG	2 cut(s)	779, 1165
Msp20I	TGGCCA	1 cut(s)	1040
MspA1I	CMGCKG	2 cut(s)	253, 1083
MspR9I	CCNGG	4 cut(s)	664, 1005, 1031, 1136
MunI	CAATTG	1 cut(s)	1272
MvaI	CCWGG	2 cut(s)	1005, 1031
MvnI	CGCG	9 cut(s)	63, 248, 260, 698, 872, 898, 918, 920, 941
MwoI	GCNNNNNNNGC	9 cut(s)	121, 245, 269, 353, 692, 761, 878, 1092, 1148
NaeI	GCCGGC	4 cut(s)	151, 442, 530, 715
NciI	CCSGG	2 cut(s)	664, 1136
NdeII	GATC	5 cut(s)	318, 624, 798, 1230, 1503
NgoMIV	GCCGGC	4 cut(s)	149, 440, 528, 713
NlaIII	CATG	2 cut(s)	101, 751
NmeAIII	GCCGAG	2 cut(s)	260, 474
NmuCI	GTSAC	4 cut(s)	382, 812, 1111, 1296
NotI	GCGGCCGC	1 cut(s)	693
NspI	RCATGY	1 cut(s)	751
NspV	TTCGAA	1 cut(s)	971
OliI	CACNNNNGTG	1 cut(s)	779
PauI	GCGCGC	1 cut(s)	918
PcsI	WCGNNNNNNNCGW	7 cut(s)	162, 486, 521, 881, 1020, 1056, 1083
PdiI	GCCGGC	4 cut(s)	151, 442, 530, 715
PfeI	GAWTC	2 cut(s)	720, 1432
PflFI	GACNNNGTC	1 cut(s)	170
PflMI	CCANNNNNTGG	1 cut(s)	1036
PinAI	ACCGGT	1 cut(s)	20
PleI	GAGTC	9 cut(s)	293, 313, 395, 452, 608, 616, 916, 1193, 1469
PmaCI	CACGTG	2 cut(s)	646, 768
PmlI	CACGTG	2 cut(s)	646, 768
PpsI	GAGTC	9 cut(s)	293, 313, 395, 452, 608, 616, 916, 1193, 1469
Ppu21I	YACGTR	2 cut(s)	646, 768
PpuMI	RGGWCCY	1 cut(s)	1103
Psp124BI	GAGCTC	2 cut(s)	117, 1242
Psp5II	RGGWCCY	1 cut(s)	1103
Psp6I	CCWGG	2 cut(s)	1003, 1029
PspCI	CACGTG	2 cut(s)	646, 768
PspFI	CCCAGC	1 cut(s)	552
PspGI	CCWGG	2 cut(s)	1003, 1029
PspPI	GGNCC	6 cut(s)	158, 519, 531, 1008, 1027, 1103
PspPPI	RGGWCCY	1 cut(s)	1103
PsrI	GAACNNNNNNTAC	2 cut(s)	248, 280
PstI	CTGCAG	1 cut(s)	869
PsuI	RGATCY	1 cut(s)	1503
PsyI	GACNNNGTC	1 cut(s)	170
PteI	GCGCGC	1 cut(s)	918
RsaI	GTAC	3 cut(s)	266, 773, 1211
RsaNI	GTAC	3 cut(s)	265, 772, 1210
RseI	CAYNNNNRTG	2 cut(s)	779, 1165
SacI	GAGCTC	2 cut(s)	117, 1242
SaqAI	TTAA	5 cut(s)	477, 656, 1245, 1362, 1576
Sau3AI	GATC	5 cut(s)	318, 624, 798, 1230, 1503
Sau96I	GGNCC	6 cut(s)	158, 519, 531, 1008, 1027, 1103
SchI	GAGTC	9 cut(s)	293, 314, 395, 452, 608, 617, 917, 1193, 1469
ScrFI	CCNGG	4 cut(s)	664, 1005, 1031, 1136
SduI	GDGCHC	8 cut(s)	117, 126, 651, 786, 999, 1242, 1293, 1455
SfaNI	GCATC	2 cut(s)	162, 381
SfcI	CTRYAG	1 cut(s)	865
SfuI	TTCGAA	1 cut(s)	971
SgrAI	CRCCGGYG	1 cut(s)	922
SinI	GGWCC	4 cut(s)	158, 519, 1008, 1103
SmiMI	CAYNNNNRTG	2 cut(s)	779, 1165
SmlI	CTYRAG	1 cut(s)	1390
SmoI	CTYRAG	1 cut(s)	1390
Sse9I	AATT	8 cut(s)	47, 83, 137, 336, 888, 1034, 1272, 1308
SstI	GAGCTC	2 cut(s)	117, 1242
StyD4I	CCNGG	4 cut(s)	662, 1003, 1029, 1134
StyI	CCWWGG	1 cut(s)	534
TaaI	ACNGT	7 cut(s)	172, 231, 622, 812, 885, 1250, 1367
TaiI	ACGT	8 cut(s)	384, 495, 515, 648, 737, 770, 1080, 1513
TaqI	TCGA	8 cut(s)	87, 120, 282, 308, 617, 731, 807, 971
TaqII	GACCGA	2 cut(s)	146, 580
TasI	AATT	8 cut(s)	47, 83, 137, 336, 888, 1034, 1272, 1308
TfiI	GAWTC	2 cut(s)	720, 1432
Tru1I	TTAA	5 cut(s)	477, 656, 1245, 1362, 1576
Tru9I	TTAA	5 cut(s)	477, 656, 1245, 1362, 1576
TscAI	CASTG	4 cut(s)	781, 1293, 1477, 1555
TseFI	GTSAC	4 cut(s)	382, 812, 1111, 1296
TseI	GCWGC	5 cut(s)	394, 864, 867, 1414, 1439
Tsp45I	GTSAC	4 cut(s)	382, 812, 1111, 1296
TspDTI	ATGAA	1 cut(s)	1456
TspGWI	ACGGA	3 cut(s)	61, 962, 1000
TspRI	CASTG	4 cut(s)	781, 1293, 1477, 1555
Tth111I	GACNNNGTC	1 cut(s)	170
Van91I	CCANNNNNTGG	1 cut(s)	1036
VneI	GTGCAC	1 cut(s)	647
VpaK11BI	GGWCC	4 cut(s)	158, 519, 1008, 1103
XapI	RAATTY	2 cut(s)	47, 83
XceI	RCATGY	1 cut(s)	751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	202
XmiI	GTMKAC	1 cut(s)	1281
ZraI	GACGTC	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.