MD14G1151100.v1.1

Belongs to the DHHC palmitoyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
24420889 .. 24424212
3324 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1151100.v1.1.491

Sequence Viewer

Length: 1359 bp
ATGAATTCGGAGCCGAATCACCACCTTCGGCACTCCCCTACCGGCGGCGCTGCCTCTGGTGGGCCGGAGCTGGTCAGGACTTACAAGACCTGGAAAGGCAGCAATATATTTTTCCTTGGTGGAAGGCTTATATTTGGACCCGATGTCAGTTCTCTTCCGTTAACAGTATCTCTCCTTACTGTGCCTGTTGCAGTTTTCTGCATCTTTGTAGGAAGAAAACTAATTGATCACTTGGGAATTTCAGTAATTATTGCTGTTTGTATATGGACGCTACTTGTTTTGGTTTTTCTTCTACTAACCTCAGGAAGAGATCCTGGTATAGTACCTCGTAATCTTAACCCTCCAGAGCCAGAGGATTATGATGCGAGTATAGAGGGTGGGTCTAGTGAATCACAACAGCCACGTTTTCCACGCATGAAGGAAGTAGTTATCAATGGTATTATTGTGAAGATCAAGTTTTGCGACACCTGCATGCTTTACAGACCTCCTCGTTGTTCTCACTGTTCCATATGCAATAACTGCGTGCAGCGATTCGACCATCACTGCCCTTGGGTTGGCCAATGTATTGGATTGCGGAACTACAGGTTCTTCTTCATGTTTGTCTTCTCTGCAACTCTTCTTTGCTTATATGTACAAGGGTTTTGCTGGGTCTACGTTGTGAGGATCATGCATGGCGAGGATATATCAATTTGGAAGGCGCTAATTAAGACTCCCGCCTCCATTGGGCTCATTATTTACAGTTTCATTGCCTTTTGGTTTGTCGGCGGTCTTACTATGTTCCACTCATATCTCATCAGTACAAACCAGTCTACTTATGAAAACTTTAGATACCGGTATGATGGACGAGAGAACCCATTCAACAAAGGGACAATTAAGAACTTCATGGAGGTATTCTGCACAAGAATTTCTCCATCCAAGAACAATTTAAGGGCAAAAGTTCCAAGAGATCCTGAAGTTCTTCCTATACCAGTCGGCGCCAATTTTGTTAGTCCTGTCATAGGGAAAGGCATGAGTGACATAGAGATGGGGAGGAAGCCATTATGGAATGACGCTTCAGGAGAGATGCGGGATTATGAAGGACAATTTAGCAACGATGATGGAGTAAACAAGGACCCCCAAGTGAGCGAGGCTGATAGGTCCCAAGATTTAAGCAGGAGTCTCCGAACAGAGAGCACAGAGAGACATGTTGCCTCGCAACCTAGACGGTCTAGTTGGGGGAGGCGGAGTGGAAGTTTAGATATAGCGCCCGAAGTGCTTGCTTTTGCAGCTGGAGTTGGCGATTCAAGGCGGGTCACTGATGAAAAAGGAATCAACGGCAAGTTGACAACAGAAATTGGACAATCCCGTACAAGTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

453

Amino Acids

50.61

Weight (kDa)

8.82

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 151 - 276 2.5e-37 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012726)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 476
Acc36I ACCTGC 1 cut(s) 476
AccB1I GGYRCC 1 cut(s) 974
AccI GTMKAC 2 cut(s) 651, 809
AciI CCGC 7 cut(s) 45, 574, 714, 765, 1066, 1222, 1288
AclWI GGATC 3 cut(s) 305, 671, 941
AcoI YGGCCR 1 cut(s) 556
AcsI RAATTY 3 cut(s) 4, 237, 903
AcuI CTGAAG 2 cut(s) 972, 1038
AcyI GRCGYC 1 cut(s) 975
AfaI GTAC 4 cut(s) 324, 633, 799, 1348
AfiI CCNNNNNNNGG 5 cut(s) 44, 60, 554, 723, 998
AflIII ACRYGT 1 cut(s) 1183
AgeI ACCGGT 1 cut(s) 831
AgsI TTSAA 2 cut(s) 859, 1284
AhdI GACNNNNNGTC 1 cut(s) 143
AjnI CCWGG 2 cut(s) 89, 313
AluBI AGCT 2 cut(s) 70, 1268
AluI AGCT 2 cut(s) 70, 1268
Alw21I GWGCWC 1 cut(s) 1175
Alw26I GTCTC 2 cut(s) 1163, 1174
AlwI GGATC 3 cut(s) 305, 671, 941
AoxI GGCC 2 cut(s) 62, 556
ApeKI GCWGC 4 cut(s) 50, 99, 526, 1265
ApoI RAATTY 3 cut(s) 4, 237, 903
AsiGI ACCGGT 1 cut(s) 831
Asp700I GAANNNNTTC 2 cut(s) 854, 957
AspLEI GCGC 4 cut(s) 50, 700, 977, 1246
AspS9I GGNCC 4 cut(s) 62, 137, 1111, 1137
AsuHPI GGTGA 1 cut(s) 11
AvaII GGWCC 3 cut(s) 137, 1111, 1137
AxyI CCTNAGG 1 cut(s) 301
BalI TGGCCA 1 cut(s) 558
BanI GGYRCC 1 cut(s) 974
BanII GRGCYC 1 cut(s) 729
BbsI GAAGAC 1 cut(s) 595
Bbv12I GWGCWC 1 cut(s) 1175
BbvI GCAGC 4 cut(s) 37, 111, 538, 1277
BccI CCATC 5 cut(s) 546, 833, 919, 1018, 1091
BceAI ACGGC 1 cut(s) 1330
BcgI CGANNNNNNTGC 2 cut(s) 1238, 1272
BciT130I CCWGG 2 cut(s) 91, 315
BclI TGATCA 1 cut(s) 226
BcoDI GTCTC 2 cut(s) 1163, 1174
BfaI CTAG 3 cut(s) 384, 1200, 1209
BfmI CTRYAG 1 cut(s) 580
BfoI RGCGCY 4 cut(s) 51, 701, 978, 1247
BfuAI ACCTGC 1 cut(s) 476
BisI GCNGC 5 cut(s) 46, 51, 100, 527, 1266
BlsI GCNGC 5 cut(s) 47, 52, 101, 528, 1267
Bme1390I CCNGG 2 cut(s) 91, 315
Bme18I GGWCC 3 cut(s) 137, 1111, 1137
BmeRI GACNNNNNGTC 1 cut(s) 143
BmgT120I GGNCC 4 cut(s) 62, 137, 1111, 1137
BmiI GGNNCC 5 cut(s) 12, 139, 976, 1113, 1139
BmrFI CCNGG 2 cut(s) 91, 315
BmsI GCATC 3 cut(s) 210, 352, 1053
BpiI GAAGAC 1 cut(s) 595
BpmI CTGGAG 2 cut(s) 327, 1290
BsaHI GRCGYC 1 cut(s) 975
BsaJI CCNNGG 2 cut(s) 115, 548
BsaWI WCCGGW 1 cut(s) 831
BsaXI ACNNNNNCTCC 4 cut(s) 1210, 1216, 1240, 1246
Bsc4I CCNNNNNNNGG 5 cut(s) 44, 60, 554, 723, 998
Bse118I RCCGGY 2 cut(s) 41, 831
Bse1I ACTGG 2 cut(s) 805, 968
Bse21I CCTNAGG 1 cut(s) 301
Bse3DI GCAATG 1 cut(s) 744
BseBI CCWGG 2 cut(s) 91, 315
BseDI CCNNGG 2 cut(s) 115, 548
BseGI GGATG 1 cut(s) 911
BseLI CCNNNNNNNGG 5 cut(s) 44, 60, 554, 723, 998
BseMI GCAATG 1 cut(s) 744
BseMII CTCAG 1 cut(s) 315
BseNI ACTGG 2 cut(s) 805, 968
BseRI GAGGAG 1 cut(s) 477
BseXI GCAGC 4 cut(s) 37, 111, 538, 1277
BseYI CCCAGC 1 cut(s) 645
BsgI GTGCAG 2 cut(s) 545, 880
BshFI GGCC 2 cut(s) 64, 558
BshNI GGYRCC 1 cut(s) 974
BshTI ACCGGT 1 cut(s) 831
BsiHKAI GWGCWC 1 cut(s) 1175
BsiSI CCGG 3 cut(s) 42, 65, 832
BslFI GGGAC 2 cut(s) 880, 1123
BslI CCNNNNNNNGG 5 cut(s) 44, 60, 554, 723, 998
BsmAI GTCTC 2 cut(s) 1163, 1174
BsmFI GGGAC 2 cut(s) 880, 1123
BsnI GGCC 2 cut(s) 64, 558
Bsp1286I GDGCHC 2 cut(s) 729, 1175
Bsp1407I TGTACA 1 cut(s) 631
Bsp143I GATC 5 cut(s) 226, 310, 450, 663, 946
BspACI CCGC 7 cut(s) 45, 574, 714, 765, 1066, 1222, 1288
BspANI GGCC 2 cut(s) 64, 558
BspCNI CTCAG 1 cut(s) 314
BspLI GGNNCC 5 cut(s) 12, 139, 976, 1113, 1139
BspMI ACCTGC 1 cut(s) 476
BspPI GGATC 3 cut(s) 305, 671, 941
BspT107I GGYRCC 1 cut(s) 974
BsrDI GCAATG 1 cut(s) 744
BsrFI RCCGGY 2 cut(s) 41, 831
BsrGI TGTACA 1 cut(s) 631
BsrI ACTGG 2 cut(s) 805, 968
BssAI RCCGGY 2 cut(s) 41, 831
BssECI CCNNGG 2 cut(s) 115, 548
BssMI GATC 5 cut(s) 226, 310, 450, 663, 946
BssNI GRCGYC 1 cut(s) 975
BssT1I CCWWGG 2 cut(s) 115, 548
Bst2UI CCWGG 2 cut(s) 91, 315
Bst4CI ACNGT 5 cut(s) 166, 181, 503, 740, 1206
Bst6I CTCTTC 3 cut(s) 159, 301, 621
BstACI GRCGYC 1 cut(s) 975
BstAPI GCANNNNNTGC 1 cut(s) 519
BstAUI TGTACA 1 cut(s) 631
BstC8I GCNNGC 3 cut(s) 473, 524, 1257
BstDEI CTNAG 1 cut(s) 301
BstENI CCTNNNNNAGG 1 cut(s) 996
BstF5I GGATG 1 cut(s) 911
BstH2I RGCGCY 4 cut(s) 51, 701, 978, 1247
BstHHI GCGC 4 cut(s) 50, 700, 977, 1246
BstKTI GATC 5 cut(s) 229, 313, 453, 666, 949
BstMAI GTCTC 2 cut(s) 1163, 1174
BstMBI GATC 5 cut(s) 226, 310, 450, 663, 946
BstMWI GCNNNNNNNGC 4 cut(s) 468, 519, 1252, 1265
BstNI CCWGG 2 cut(s) 91, 315
BstNSI RCATGY 2 cut(s) 475, 1187
BstSCI CCNGG 2 cut(s) 89, 313
BstSFI CTRYAG 1 cut(s) 580
BstV1I GCAGC 4 cut(s) 37, 111, 538, 1277
BstV2I GAAGAC 1 cut(s) 595
BstX2I RGATCY 2 cut(s) 310, 946
BstXI CCANNNNNNTGG 1 cut(s) 566
BstYI RGATCY 2 cut(s) 310, 946
Bsu36I CCTNAGG 1 cut(s) 301
BsuRI GGCC 2 cut(s) 64, 558
BtsCI GGATG 1 cut(s) 911
BtsI GCAGTG 1 cut(s) 541
BtsIMutI CAGTG 3 cut(s) 499, 541, 1293
BveI ACCTGC 1 cut(s) 476
Cac8I GCNNGC 3 cut(s) 473, 524, 1257
CfoI GCGC 4 cut(s) 50, 700, 977, 1246
Cfr10I RCCGGY 2 cut(s) 41, 831
Cfr13I GGNCC 4 cut(s) 62, 137, 1111, 1137
CseI GACGC 2 cut(s) 277, 1058
Csp6I GTAC 4 cut(s) 323, 632, 798, 1347
CspAI ACCGGT 1 cut(s) 831
CviAII CATG 8 cut(s) 415, 472, 595, 667, 671, 883, 1009, 1184
CviQI GTAC 4 cut(s) 323, 632, 798, 1347
DdeI CTNAG 1 cut(s) 301
DinI GGCGCC 1 cut(s) 976
DpnI GATC 5 cut(s) 228, 312, 452, 665, 948
DpnII GATC 5 cut(s) 226, 310, 450, 663, 946
DriI GACNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 556
Eam1104I CTCTTC 3 cut(s) 159, 301, 621
Eam1105I GACNNNNNGTC 1 cut(s) 143
EarI CTCTTC 3 cut(s) 159, 301, 621
EciI GGCGGA 1 cut(s) 1237
Eco130I CCWWGG 2 cut(s) 115, 548
Eco24I GRGCYC 1 cut(s) 729
Eco47I GGWCC 3 cut(s) 137, 1111, 1137
Eco57I CTGAAG 2 cut(s) 972, 1038
Eco81I CCTNAGG 1 cut(s) 301
EcoNI CCTNNNNNAGG 1 cut(s) 996
EcoO109I RGGNCCY 2 cut(s) 1111, 1137
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 2 cut(s) 89, 313
EcoT14I CCWWGG 2 cut(s) 115, 548
EcoT22I ATGCAT 1 cut(s) 672
EcoT38I GRGCYC 1 cut(s) 729
EgeI GGCGCC 1 cut(s) 976
EheI GGCGCC 1 cut(s) 976
ErhI CCWWGG 2 cut(s) 115, 548
FaeI CATG 8 cut(s) 418, 475, 598, 670, 674, 886, 1012, 1187
FaqI GGGAC 2 cut(s) 880, 1123
FatI CATG 8 cut(s) 414, 471, 594, 666, 670, 882, 1008, 1183
FauI CCCGC 3 cut(s) 721, 1059, 1281
FauNDI CATATG 1 cut(s) 509
FbaI TGATCA 1 cut(s) 226
FblI GTMKAC 2 cut(s) 651, 809
Fnu4HI GCNGC 5 cut(s) 46, 51, 100, 527, 1266
FokI GGATG 1 cut(s) 898
FriOI GRGCYC 1 cut(s) 729
Fsp4HI GCNGC 5 cut(s) 46, 51, 100, 527, 1266
FspBI CTAG 3 cut(s) 384, 1200, 1209
GlaI GCGC 4 cut(s) 49, 699, 976, 1245
GluI GCNGC 5 cut(s) 46, 51, 100, 527, 1266
GsaI CCCAGC 1 cut(s) 649
GsuI CTGGAG 2 cut(s) 327, 1290
HaeII RGCGCY 4 cut(s) 51, 701, 978, 1247
HaeIII GGCC 2 cut(s) 64, 558
HapII CCGG 3 cut(s) 42, 65, 832
HgaI GACGC 2 cut(s) 277, 1058
HhaI GCGC 4 cut(s) 50, 700, 977, 1246
Hin1I GRCGYC 1 cut(s) 975
Hin1II CATG 8 cut(s) 418, 475, 598, 670, 674, 886, 1012, 1187
Hin6I GCGC 4 cut(s) 48, 698, 975, 1244
HinP1I GCGC 4 cut(s) 48, 698, 975, 1244
HincII GTYRAC 2 cut(s) 162, 1323
HindII GTYRAC 2 cut(s) 162, 1323
HinfI GANTC 7 cut(s) 16, 389, 531, 709, 1156, 1280, 1308
HpaI GTTAAC 1 cut(s) 162
HpaII CCGG 3 cut(s) 42, 65, 832
HphI GGTGA 1 cut(s) 11
Hpy166II GTNNAC 5 cut(s) 162, 652, 810, 1105, 1323
Hpy188I TCNGA 2 cut(s) 10, 1163
Hpy188III TCNNGA 5 cut(s) 76, 303, 344, 950, 1056
Hpy8I GTNNAC 5 cut(s) 162, 652, 810, 1105, 1323
HpyAV CCTTC 5 cut(s) 35, 117, 412, 688, 1070
HpyCH4III ACNGT 5 cut(s) 166, 181, 503, 740, 1206
HpyCH4IV ACGT 2 cut(s) 403, 654
HpyCH4V TGCA 9 cut(s) 191, 201, 471, 513, 526, 611, 670, 897, 1265
HpyF10VI GCNNNNNNNGC 4 cut(s) 468, 519, 1252, 1265
HpyF3I CTNAG 1 cut(s) 301
HpySE526I ACGT 2 cut(s) 403, 654
Hsp92I GRCGYC 1 cut(s) 975
Hsp92II CATG 8 cut(s) 418, 475, 598, 670, 674, 886, 1012, 1187
HspAI GCGC 4 cut(s) 48, 698, 975, 1244
KasI GGCGCC 1 cut(s) 974
Ksp22I TGATCA 1 cut(s) 226
KspAI GTTAAC 1 cut(s) 162
Kzo9I GATC 5 cut(s) 226, 310, 450, 663, 946
LmnI GCTCC 2 cut(s) 10, 67
Lsp1109I GCAGC 4 cut(s) 37, 111, 538, 1277
LweI GCATC 3 cut(s) 210, 352, 1053
MaeI CTAG 3 cut(s) 384, 1200, 1209
MaeII ACGT 2 cut(s) 403, 654
MaeIII GTNAC 2 cut(s) 1013, 1291
MalI GATC 5 cut(s) 228, 312, 452, 665, 948
MboI GATC 5 cut(s) 226, 310, 450, 663, 946
MflI RGATCY 2 cut(s) 310, 946
MhlI GDGCHC 2 cut(s) 729, 1175
MlsI TGGCCA 1 cut(s) 558
MluNI TGGCCA 1 cut(s) 558
Mly113I GGCGCC 1 cut(s) 975
MlyI GAGTC 2 cut(s) 703, 1165
Mox20I TGGCCA 1 cut(s) 558
Mph1103I ATGCAT 1 cut(s) 672
MroXI GAANNNNTTC 2 cut(s) 854, 957
MscI TGGCCA 1 cut(s) 558
MseI TTAA 6 cut(s) 161, 336, 705, 873, 926, 1148
MslI CAYNNNNRTG 2 cut(s) 470, 1022
Msp20I TGGCCA 1 cut(s) 558
MspA1I CMGCKG 1 cut(s) 1268
MspI CCGG 3 cut(s) 42, 65, 832
MspR9I CCNGG 2 cut(s) 91, 315
MvaI CCWGG 2 cut(s) 91, 315
MwoI GCNNNNNNNGC 4 cut(s) 468, 519, 1252, 1265
NarI GGCGCC 1 cut(s) 975
NdeI CATATG 1 cut(s) 509
NdeII GATC 5 cut(s) 226, 310, 450, 663, 946
NlaIII CATG 8 cut(s) 418, 475, 598, 670, 674, 886, 1012, 1187
NlaIV GGNNCC 5 cut(s) 12, 139, 976, 1113, 1139
NmuCI GTSAC 2 cut(s) 1013, 1291
NsiI ATGCAT 1 cut(s) 672
NspI RCATGY 2 cut(s) 475, 1187
PaeI GCATGC 1 cut(s) 475
PaqCI CACCTGC 1 cut(s) 476
PciI ACATGT 1 cut(s) 1183
PdmI GAANNNNTTC 2 cut(s) 854, 957
PfeI GAWTC 5 cut(s) 16, 389, 531, 1280, 1308
PinAI ACCGGT 1 cut(s) 831
PkrI GCNGC 5 cut(s) 47, 52, 101, 528, 1267
PleI GAGTC 2 cut(s) 703, 1164
PluTI GGCGCC 1 cut(s) 978
PpsI GAGTC 2 cut(s) 703, 1164
PpuMI RGGWCCY 2 cut(s) 1111, 1137
PscI ACATGT 1 cut(s) 1183
Psp5II RGGWCCY 2 cut(s) 1111, 1137
Psp6I CCWGG 2 cut(s) 89, 313
PspFI CCCAGC 1 cut(s) 645
PspGI CCWGG 2 cut(s) 89, 313
PspN4I GGNNCC 5 cut(s) 12, 139, 976, 1113, 1139
PspPI GGNCC 4 cut(s) 62, 137, 1111, 1137
PspPPI RGGWCCY 2 cut(s) 1111, 1137
PsuI RGATCY 2 cut(s) 310, 946
PvuII CAGCTG 1 cut(s) 1268
RsaI GTAC 4 cut(s) 324, 633, 799, 1348
RsaNI GTAC 4 cut(s) 323, 632, 798, 1347
RseI CAYNNNNRTG 2 cut(s) 470, 1022
SaqAI TTAA 6 cut(s) 161, 336, 705, 873, 926, 1148
SatI GCNGC 5 cut(s) 46, 51, 100, 527, 1266
Sau3AI GATC 5 cut(s) 226, 310, 450, 663, 946
Sau96I GGNCC 4 cut(s) 62, 137, 1111, 1137
SchI GAGTC 2 cut(s) 703, 1165
ScrFI CCNGG 2 cut(s) 91, 315
SduI GDGCHC 2 cut(s) 729, 1175
SfaNI GCATC 3 cut(s) 210, 352, 1053
SfcI CTRYAG 1 cut(s) 580
SfoI GGCGCC 1 cut(s) 976
SinI GGWCC 3 cut(s) 137, 1111, 1137
SmiMI CAYNNNNRTG 2 cut(s) 470, 1022
SphI GCATGC 1 cut(s) 475
SsiI CCGC 7 cut(s) 45, 574, 714, 765, 1066, 1222, 1288
SspDI GGCGCC 1 cut(s) 974
SspMI CTAG 3 cut(s) 384, 1200, 1209
StyD4I CCNGG 2 cut(s) 89, 313
StyI CCWWGG 2 cut(s) 115, 548
TaaI ACNGT 5 cut(s) 166, 181, 503, 740, 1206
TaiI ACGT 2 cut(s) 406, 657
TaqI TCGA 1 cut(s) 534
TatI WGTACW 2 cut(s) 631, 797
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 5 cut(s) 16, 389, 531, 1280, 1308
Tru1I TTAA 6 cut(s) 161, 336, 705, 873, 926, 1148
Tru9I TTAA 6 cut(s) 161, 336, 705, 873, 926, 1148
TscAI CASTG 3 cut(s) 506, 548, 1300
TseFI GTSAC 2 cut(s) 1013, 1291
TseI GCWGC 4 cut(s) 50, 99, 526, 1265
Tsp45I GTSAC 2 cut(s) 1013, 1291
TspDTI ATGAA 8 cut(s) 17, 431, 583, 733, 831, 871, 1089, 1314
TspGWI ACGGA 1 cut(s) 147
TspRI CASTG 3 cut(s) 506, 548, 1300
VpaK11BI GGWCC 3 cut(s) 137, 1111, 1137
XagI CCTNNNNNAGG 1 cut(s) 996
XapI RAATTY 3 cut(s) 4, 237, 903
XceI RCATGY 2 cut(s) 475, 1187
XmiI GTMKAC 2 cut(s) 651, 809
XmnI GAANNNNTTC 2 cut(s) 854, 957
XspI CTAG 3 cut(s) 384, 1200, 1209
Zsp2I ATGCAT 1 cut(s) 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.