MD14G1179300.v1.1

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
27197528 .. 27199505
1978 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1179300.v1.1.491

Sequence Viewer

Length: 162 bp
ATGTCCCAAGTTTTTAAGGTTTATACAGAAAGTGACACTGCTAAAGCTTATGCCGGGAGCAGGACTTACGCAGCAGTTAACGAAGTATGGACTCAGGAGAACACAGCTGCTTTAATGGTCATGTTATGTGGGCTTGTCGGCATCCCACTTCCAATGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

54

Amino Acids

5.79

Weight (kDa)

4.75

Isoelectric Point (pI)

26.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019752)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 60
AluBI AGCT 2 cut(s) 47, 107
AluI AGCT 2 cut(s) 47, 107
ApeKI GCWGC 2 cut(s) 71, 107
AsuC2I CCSGG 1 cut(s) 55
BbvI GCAGC 2 cut(s) 83, 94
BcnI CCSGG 1 cut(s) 55
BisI GCNGC 2 cut(s) 72, 108
BlsI GCNGC 2 cut(s) 73, 109
Bme1390I CCNGG 1 cut(s) 55
BmrFI CCNGG 1 cut(s) 55
BmsI GCATC 1 cut(s) 150
BpuMI CCSGG 1 cut(s) 55
Bsc4I CCNNNNNNNGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 60
BseMII CTCAG 1 cut(s) 107
BseXI GCAGC 2 cut(s) 83, 94
BsiSI CCGG 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 60
BspCNI CTCAG 1 cut(s) 106
BstDEI CTNAG 1 cut(s) 93
BstF5I GGATG 1 cut(s) 141
BstSCI CCNGG 1 cut(s) 53
BstV1I GCAGC 2 cut(s) 83, 94
BtsCI GGATG 1 cut(s) 141
BtsI GCAGTG 1 cut(s) 36
BtsIMutI CAGTG 1 cut(s) 36
CviAII CATG 1 cut(s) 121
CviJI RGCY 3 cut(s) 47, 107, 133
CviKI_1 RGCY 3 cut(s) 47, 107, 133
DdeI CTNAG 1 cut(s) 93
FaeI CATG 1 cut(s) 124
FaiI YATR 5 cut(s) 24, 51, 88, 122, 127
FatI CATG 1 cut(s) 120
Fnu4HI GCNGC 2 cut(s) 72, 108
FokI GGATG 1 cut(s) 128
Fsp4HI GCNGC 2 cut(s) 72, 108
GluI GCNGC 2 cut(s) 72, 108
HapII CCGG 1 cut(s) 54
Hin1II CATG 1 cut(s) 124
HincII GTYRAC 1 cut(s) 79
HindII GTYRAC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 45
HinfI GANTC 1 cut(s) 91
HpaI GTTAAC 1 cut(s) 79
HpaII CCGG 1 cut(s) 54
Hpy166II GTNNAC 1 cut(s) 79
Hpy188III TCNNGA 1 cut(s) 95
Hpy8I GTNNAC 1 cut(s) 79
HpyF3I CTNAG 1 cut(s) 93
Hsp92II CATG 1 cut(s) 124
KspAI GTTAAC 1 cut(s) 79
LmnI GCTCC 1 cut(s) 57
LpnPI CCDG 3 cut(s) 46, 67, 80
Lsp1109I GCAGC 2 cut(s) 83, 94
LweI GCATC 1 cut(s) 150
MaeIII GTNAC 1 cut(s) 32
MlyI GAGTC 1 cut(s) 85
MseI TTAA 3 cut(s) 15, 78, 113
MspA1I CMGCKG 1 cut(s) 107
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 1 cut(s) 55
NciI CCSGG 1 cut(s) 55
NlaIII CATG 1 cut(s) 124
NmuCI GTSAC 1 cut(s) 32
PkrI GCNGC 2 cut(s) 73, 109
PleI GAGTC 1 cut(s) 85
PpsI GAGTC 1 cut(s) 85
PvuII CAGCTG 1 cut(s) 107
SaqAI TTAA 3 cut(s) 15, 78, 113
SatI GCNGC 2 cut(s) 72, 108
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 1 cut(s) 55
SetI ASST 3 cut(s) 21, 49, 109
SfaNI GCATC 1 cut(s) 150
SgeI CNNG 7 cut(s) 20, 66, 67, 73, 107, 133, 146
StyD4I CCNGG 1 cut(s) 53
Tru1I TTAA 3 cut(s) 15, 78, 113
Tru9I TTAA 3 cut(s) 15, 78, 113
TscAI CASTG 1 cut(s) 43
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 2 cut(s) 71, 107
Tsp45I GTSAC 1 cut(s) 32
TspRI CASTG 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.