Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0016533

Physical Location & Seq

Genomic Coordinates Reverse (-)

29270799 .. 29273429

Gene Structure 2631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1205200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGCCTCGGCCTTTCTTCTCCCTATCCCTTCCTTTCCTTCTCCTATTCACGTCAACCTTCAACTTCGCCAACTTTGTTTCGGCCAAAGGTCACGAATCTTCTTCTTCTTCTCCTCCTCCTCCTCCTACTGCCACATTCTCTCCCTCCGATAACTTTCTCATCGATTGTGGCTCGTCCCAACAAACCAAGCTTGACGATGGCAGGACATTCAAATCAGACCGTGACACGGCTAGTCTTTTGTCCACAACCGAAGATGTCCAAACTTCAGTTGATTCAATCACTGCCAATGCCTCTTCCTCTATACCACCTTCCTCTCAACCTTTGTATCGCACTGCGCGAATCTTCTCCGAAAAATCCACCTACTCTTTCTACATTAACAAACCGGGGCAGCATTGGATCAGGCTTTACTTCTATCCACTTCCACACAACACGTATAATCTGACGAGAGCGGTTTTTTCAGTGAACGCGGATAAGTATGTTCTCTTGCATGACTTCTCCGTGACAGACAATATGACGTTGGTGTTTAAAGAGTACATTCTCAATGTCACGGAAAACAGATTTTCGCTACATTTCGATCCCAAGAAGAAATCGTGTGCGTTTGTTAATGCTATTGAGGTTGTCTCTGCCCCTGACACTATGTTCAACAATTCAGCTACATCCGTTTCTCCGGTTGGAGACTTCAACAGCTTGGCTAATTACGCTTTTCAAGTTCGTTACCGTGTAAACATTGGAGGGCAGTTGATATCTCCAGGAAACGACACATTGTCAAGGACTTGGGAGCCTGATAGTGCATACAATGTATTTCCACAAGGAGCTAAAAACGCGTCTGTGGCTACGAAAGCCATCAAGTATCCACAGAGTGGCGCTTCTCCATTGATTGCCCCGAATTGGGTTTACTCAACTGCTCAACACATGCGAGACTCTGCTACAAGCCAGCAGAATTTCAACCTCACTTGGAAGTTGAATGTCGAAGAAGAGTTTTCGTATTTGATTAGGCTGCATTTTGCTGACATTGTGAGTAAAACCCTTAACGATTTATACTTCAATTTCTACATCAACGGGATGATGGCCGCGTCCAACCTTGACCTTTCCTCACTCACCGGCGCGCTCTCCACTGCGTATTACAAAGATTTCGTGCTCAATGCCACGGCGGTGTCAAGTGAAAATAGTACCATCAGAATTCAGGTTGGTCCCGGAACTACTGGGTCAGGCTCTCAGGATGCACTTCTTAATGGATTGGAGATATTAAAGATGACCAACGTTGCGGATAGCCTGGATGGTCTTTTCGGGGTTGATGGATCGTACAAGGGGCCAGGAAGAGTAAGCACCGTGAAGAAGATAGTTGCCGGCGTTGGTTTGGCAATGGGAGTGACAGCAATGTTGTTAGTTGTTGTGGTTGTTGTCCGGTGGCGCAAAAGACCTCAAGGCTGGGAAAAGCGAAACAGCTTTTCGTCGTGGTTGCTTCCTCTCCATTCGAGCCAGTCTAGCTTCTTCTCCAGCAAGAACAGCTCTCGCAAATCAAGCGTCTTTGGGTCGCGCAAGAGCAAAAGCGGTTACTCAGGCTACTTCTCATCCTATGGAAGGTCCTTCACCTTCGCTCAGTTACAAAATGCAACACAAAACTTTGATGACAAGGTAGTGATTGGCGTTGGTGGGTTTGGAAAAGTGTACCTTGGGGAGTTGGAAGATGGCACAAAGCTCGCGATCAAACGAGGAAATCCAAATTCGGAGCAAGGCATTAACGAATTCAGAACAGAAATGGACATGCTTTCCAAGCTGCGCCATCGCCACCTTGTTTCGCTGATCGGATTTTGTGATGAGAATAATGAAATGATCCTTGTGTATGAGTACATGGCGAATGGACCGCTTCGCGACCACCTCTATGGCTCGAACCAGCCTCCACTGTCATGGAAACAAAGGCTTGAGGTTTGCATTGGTGCTGCTCGCGGTTTACATTACCTGCACACTGGTGCCGCACAAGGTATCATACATCGTGACGTAAAGACAACAAACATTCTCCTCGATGAGAATTTCGTAGCAAAAGTTTCAGATTTTGGCTTGTCAAAAGCTGCGCCTACGCTGGAACAAACCCATGTCAGCACAGCCGTCAAGGGTAGTTTTGGTTATCTTGATCCGGAGTACTTCAGAAGGCAACAGCTAACTGAGAAATCCGATGTCTATTCTTTTGGTGTGGTGCTTTTCGAGGCGCTATGCGCAAGGCCTGTCATAAACCCGGCCCTGCCAAGAGAGCAGGTGAGCTTGGCTGAGTGGGCAATGCAGTGGCACAGGAAAGGCATGATCGAAAAGATAATTGATCCTTATATCGCTAGCTCAGTTGACTCTGGTTCGCTGAAAAAGTTTGTAGAAGCTGCAGAGAAATGCCTTGCTGAATACGGTGTAGATAGGCCTAACATGGGAGATGTGTTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCCGCCTCGCAGATTGATCTGCCGGAAGATAAAACTTCCAGTCTCATTTCTTTGGACAAAGCAAGCGAAAACGGATCAAAGGAAGGCTCTGCTGTCGGAGTGAGTGATGATTCTGGAGTGACAATTGGTTCTCCTGCGTTTGCTAAAAAAGGGAACATTCAGGGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009705 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0051049 GO:0051924 GO:0055082 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097272 GO:0097275 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Malectin_like Pkinase_Tyr zf-C3HC4_2

Protein Analysis

877

Amino Acids

96.5

Weight (kDa)

7.63

Isoelectric Point (pI)

37.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	53 - 192	6.3e-08	Malectin domain
Malectin_like	PF12819	54 - 417	1.9e-31	Malectin-like domain
Malectin	PF11721	240 - 386	1.3e-08	Malectin domain
Pkinase	PF00069	544 - 750	6.2e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	547 - 741	2.2e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61350
fragaria_vesca	FvH4_5g14520
malus_domestica	MD14G1205200.v1.1
prunus_persica	Prupe.5G198600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0182131
rosa_laevigata	RLG00000005148
rosa_multiflora	Rmu_co8484825.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271480
rosa_rugosa	Rorug06G0445800
rosa_samantha	Rh7AG048600 Rh7BG048400 Rh7CG049900 Rh7DG047800
rosa_wichuraiana	Rw7G003970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2242
Acc16I	TGCGCA	1 cut(s)	2215
Acc36I	ACCTGC	2 cut(s)	1968, 2242
AccB1I	GGYRCC	1 cut(s)	1970
AccB7I	CCANNNNNTGG	1 cut(s)	860
AccBSI	CCGCTC	1 cut(s)	449
AccII	CGCG	9 cut(s)	337, 467, 824, 1073, 1106, 1537, 1703, 1872, 1947
AccIII	TCCGGA	1 cut(s)	2134
AclI	AACGTT	1 cut(s)	1260
AclWI	GGATC	7 cut(s)	404, 569, 1306, 1828, 2126, 2309, 2542
AcoI	YGGCCR	2 cut(s)	81, 1068
AcsI	RAATTY	5 cut(s)	940, 1179, 1723, 1745, 2029
AcuI	CTGAAG	2 cut(s)	249, 2128
AdeI	CACNNNGTG	1 cut(s)	860
AfaI	GTAC	6 cut(s)	533, 1171, 1304, 1670, 1850, 2141
AfiI	CCNNNNNNNGG	6 cut(s)	226, 860, 888, 889, 1581, 2414
AflIII	ACRYGT	2 cut(s)	429, 822
AhdI	GACNNNNNGTC	1 cut(s)	763
AjiI	CACGTC	1 cut(s)	51
AjnI	CCWGG	3 cut(s)	748, 1272, 1312
AleI	CACNNNNGTG	2 cut(s)	1151, 1968
Alw21I	GWGCWC	1 cut(s)	1140
Alw26I	GTCTC	4 cut(s)	625, 669, 912, 2507
AlwI	GGATC	7 cut(s)	404, 569, 1306, 1828, 2126, 2309, 2542
Aor13HI	TCCGGA	1 cut(s)	2134
AoxI	GGCC	8 cut(s)	8, 81, 1068, 1310, 2219, 2235, 2405, 2460
ApeKI	GCWGC	7 cut(s)	388, 997, 1777, 1940, 2069, 2369, 2449
ApoI	RAATTY	5 cut(s)	940, 1179, 1723, 1745, 2029
ArsI	GACNNNNNNTTYG	2 cut(s)	1509, 1541
AspS9I	GGNCC	5 cut(s)	1190, 1310, 1584, 1862, 2236
AsuC2I	CCSGG	3 cut(s)	384, 1194, 2234
AsuHPI	GGTGA	3 cut(s)	1090, 1582, 2266
AsuNHI	GCTAGC	1 cut(s)	2327
AvaII	GGWCC	3 cut(s)	1190, 1584, 1862
BaeI	ACNNNNGTAYC	2 cut(s)	308, 341
BanI	GGYRCC	1 cut(s)	1970
Bbv12I	GWGCWC	1 cut(s)	1140
BbvI	GCAGC	7 cut(s)	400, 984, 1764, 1927, 2056, 2356, 2461
BccI	CCATC	8 cut(s)	191, 851, 1060, 1181, 1271, 1289, 1682, 1791
BceAI	ACGGC	3 cut(s)	243, 1164, 2090
BcgI	CGANNNNNNTGC	2 cut(s)	1681, 1715
BciT130I	CCWGG	3 cut(s)	750, 1274, 1314
BciVI	GTATCC	1 cut(s)	861
BcnI	CCSGG	3 cut(s)	384, 1194, 2234
BcoDI	GTCTC	4 cut(s)	625, 669, 912, 2507
BfaI	CTAG	3 cut(s)	231, 1485, 2328
BfmI	CTRYAG	1 cut(s)	2370
BfoI	RGCGCY	2 cut(s)	867, 2210
BfuAI	ACCTGC	2 cut(s)	1968, 2242
BfuI	GTATCC	1 cut(s)	861
BmcAI	AGTACT	1 cut(s)	2141
Bme1390I	CCNGG	6 cut(s)	384, 750, 1194, 1274, 1314, 2234
Bme18I	GGWCC	3 cut(s)	1190, 1584, 1862
BmeRI	GACNNNNNGTC	1 cut(s)	763
BmgBI	CACGTC	1 cut(s)	51
BmgT120I	GGNCC	5 cut(s)	1190, 1310, 1584, 1862, 2236
BmiI	GGNNCC	4 cut(s)	780, 1192, 1311, 1972
BmrFI	CCNGG	6 cut(s)	384, 750, 1194, 1274, 1314, 2234
BmrI	ACTGGG	1 cut(s)	1212
BmsI	GCATC	1 cut(s)	1210
BmtI	GCTAGC	1 cut(s)	2331
BmuI	ACTGGG	1 cut(s)	1212
BplI	GAGNNNNNCTC	4 cut(s)	605, 637, 2450, 2482
BpmI	CTGGAG	3 cut(s)	732, 1480, 2595
BpuEI	CTTGAG	2 cut(s)	1407, 1943
BpuMI	CCSGG	3 cut(s)	384, 1194, 2234
Bsa29I	ATCGAT	1 cut(s)	162
BsaAI	YACGTR	1 cut(s)	432
BsaJI	CCNNGG	4 cut(s)	5, 383, 1146, 1672
BsaWI	WCCGGW	3 cut(s)	667, 1404, 2134
BsaXI	ACNNNNNCTCC	2 cut(s)	124, 154
Bsc4I	CCNNNNNNNGG	6 cut(s)	226, 860, 888, 889, 1581, 2414
Bse118I	RCCGGY	2 cut(s)	1100, 1346
Bse1I	ACTGG	4 cut(s)	1207, 1480, 1972, 2499
Bse3DI	GCAATG	3 cut(s)	1368, 1383, 2280
BseAI	TCCGGA	1 cut(s)	2134
BseBI	CCWGG	3 cut(s)	750, 1274, 1314
BseCI	ATCGAT	1 cut(s)	162
BseDI	CCNNGG	4 cut(s)	5, 383, 1146, 1672
BseGI	GGATG	5 cut(s)	656, 1068, 1225, 1282, 1571
BseLI	CCNNNNNNNGG	6 cut(s)	226, 860, 888, 889, 1581, 2414
BseMI	GCAATG	3 cut(s)	1368, 1383, 2280
BseMII	CTCAG	6 cut(s)	1229, 1572, 1613, 2154, 2256, 2346
BseNI	ACTGG	4 cut(s)	1207, 1480, 1972, 2499
BsePI	GCGCGC	1 cut(s)	1104
BseRI	GAGGAG	5 cut(s)	102, 105, 108, 111, 2009
BseXI	GCAGC	7 cut(s)	400, 984, 1764, 1927, 2056, 2356, 2461
BseYI	CCCAGC	1 cut(s)	1428
BsgI	GTGCAG	1 cut(s)	1946
Bsh1236I	CGCG	9 cut(s)	337, 467, 824, 1073, 1106, 1537, 1703, 1872, 1947
BshFI	GGCC	8 cut(s)	10, 83, 1070, 1312, 2221, 2237, 2407, 2462
BshNI	GGYRCC	1 cut(s)	1970
BshVI	ATCGAT	1 cut(s)	162
BsiHKAI	GWGCWC	1 cut(s)	1140
BsiSI	CCGG	9 cut(s)	383, 668, 1101, 1194, 1347, 1405, 2135, 2234, 2483
BslFI	GGGAC	2 cut(s)	160, 1176
BslI	CCNNNNNNNGG	6 cut(s)	226, 860, 888, 889, 1581, 2414
BsmAI	GTCTC	4 cut(s)	625, 669, 912, 2507
BsmFI	GGGAC	2 cut(s)	160, 1176
BsnI	GGCC	8 cut(s)	10, 83, 1070, 1312, 2221, 2237, 2407, 2462
Bsp1286I	GDGCHC	1 cut(s)	1140
Bsp13I	TCCGGA	1 cut(s)	2134
Bsp68I	TCGCGA	2 cut(s)	1703, 1872
BspANI	GGCC	8 cut(s)	10, 83, 1070, 1312, 2221, 2237, 2407, 2462
BspCNI	CTCAG	6 cut(s)	1228, 1571, 1612, 2155, 2257, 2345
BspDI	ATCGAT	1 cut(s)	162
BspEI	TCCGGA	1 cut(s)	2134
BspFNI	CGCG	9 cut(s)	337, 467, 824, 1073, 1106, 1537, 1703, 1872, 1947
BspLI	GGNNCC	4 cut(s)	780, 1192, 1311, 1972
BspMAI	CTGCAG	1 cut(s)	2374
BspMI	ACCTGC	2 cut(s)	1968, 2242
BspOI	GCTAGC	1 cut(s)	2331
BspPI	GGATC	7 cut(s)	404, 569, 1306, 1828, 2126, 2309, 2542
BspT107I	GGYRCC	1 cut(s)	1970
BsrBI	CCGCTC	1 cut(s)	449
BsrDI	GCAATG	3 cut(s)	1368, 1383, 2280
BsrFI	RCCGGY	2 cut(s)	1100, 1346
BsrI	ACTGG	4 cut(s)	1207, 1480, 1972, 2499
BssAI	RCCGGY	2 cut(s)	1100, 1346
BssECI	CCNNGG	4 cut(s)	5, 383, 1146, 1672
BssHII	GCGCGC	1 cut(s)	1104
BssT1I	CCWWGG	1 cut(s)	1672
Bst2UI	CCWGG	3 cut(s)	750, 1274, 1314
Bst4CI	ACNGT	5 cut(s)	221, 719, 1330, 1905, 2396
Bst6I	CTCTTC	3 cut(s)	298, 969, 1312
BstBAI	YACGTR	1 cut(s)	432
BstC8I	GCNNGC	7 cut(s)	935, 1106, 1348, 1701, 1945, 2329, 2524
BstDEI	CTNAG	6 cut(s)	1215, 1558, 1599, 2163, 2265, 2332
BstDSI	CCRYGG	1 cut(s)	1146
BstENI	CCTNNNNNAGG	1 cut(s)	1579
BstF5I	GGATG	5 cut(s)	656, 1068, 1225, 1282, 1571
BstFNI	CGCG	9 cut(s)	337, 467, 824, 1073, 1106, 1537, 1703, 1872, 1947
BstH2I	RGCGCY	2 cut(s)	867, 2210
BstMAI	GTCTC	4 cut(s)	625, 669, 912, 2507
BstNI	CCWGG	3 cut(s)	750, 1274, 1314
BstNSI	RCATGY	2 cut(s)	916, 1768
BstSCI	CCNGG	6 cut(s)	382, 748, 1192, 1272, 1312, 2232
BstSFI	CTRYAG	1 cut(s)	2370
BstUI	CGCG	9 cut(s)	337, 467, 824, 1073, 1106, 1537, 1703, 1872, 1947
BstV1I	GCAGC	7 cut(s)	400, 984, 1764, 1927, 2056, 2356, 2461
BstXI	CCANNNNNNTGG	2 cut(s)	1883, 1908
Bsu15I	ATCGAT	1 cut(s)	162
BsuI	GTATCC	1 cut(s)	861
BsuRI	GGCC	8 cut(s)	10, 83, 1070, 1312, 2221, 2237, 2407, 2462
BsuTUI	ATCGAT	1 cut(s)	162
BtgI	CCRYGG	1 cut(s)	1146
BtgZI	GCGATG	1 cut(s)	1769
BtrI	CACGTC	1 cut(s)	51
BtsCI	GGATG	5 cut(s)	656, 1068, 1225, 1282, 1571
BtsI	GCAGTG	4 cut(s)	279, 330, 1113, 2285
BtsIMutI	CAGTG	7 cut(s)	279, 330, 465, 1113, 1901, 1965, 2285
BtuMI	TCGCGA	2 cut(s)	1703, 1872
BveI	ACCTGC	2 cut(s)	1968, 2242
Cac8I	GCNNGC	7 cut(s)	935, 1106, 1348, 1701, 1945, 2329, 2524
Cfr10I	RCCGGY	2 cut(s)	1100, 1346
Cfr13I	GGNCC	5 cut(s)	1190, 1310, 1584, 1862, 2236
ClaI	ATCGAT	1 cut(s)	162
CseI	GACGC	3 cut(s)	813, 1062, 1513
Csp6I	GTAC	6 cut(s)	532, 1170, 1303, 1669, 1849, 2140
CviAII	CATG	8 cut(s)	488, 913, 1765, 1852, 1908, 2093, 2296, 2413
CviQI	GTAC	6 cut(s)	532, 1170, 1303, 1669, 1849, 2140
DdeI	CTNAG	6 cut(s)	1215, 1558, 1599, 2163, 2265, 2332
DraI	TTTAAA	1 cut(s)	526
DraIII	CACNNNGTG	1 cut(s)	860
DriI	GACNNNNNGTC	1 cut(s)	763
EaeI	YGGCCR	2 cut(s)	81, 1068
Eam1104I	CTCTTC	3 cut(s)	298, 969, 1312
Eam1105I	GACNNNNNGTC	1 cut(s)	763
EarI	CTCTTC	3 cut(s)	298, 969, 1312
Eco130I	CCWWGG	1 cut(s)	1672
Eco147I	AGGCCT	2 cut(s)	2221, 2407
Eco32I	GATATC	1 cut(s)	744
Eco47I	GGWCC	3 cut(s)	1190, 1584, 1862
Eco57I	CTGAAG	2 cut(s)	249, 2128
EcoNI	CCTNNNNNAGG	1 cut(s)	1579
EcoO109I	RGGNCCY	1 cut(s)	1584
EcoRI	GAATTC	2 cut(s)	1179, 1745
EcoRII	CCWGG	3 cut(s)	748, 1272, 1312
EcoRV	GATATC	1 cut(s)	744
EcoT14I	CCWWGG	1 cut(s)	1672
ErhI	CCWWGG	1 cut(s)	1672
FaeI	CATG	8 cut(s)	491, 916, 1768, 1855, 1911, 2096, 2299, 2416
FalI	AAGNNNNNCTT	2 cut(s)	1656, 1688
FaqI	GGGAC	2 cut(s)	160, 1176
FatI	CATG	8 cut(s)	487, 912, 1764, 1851, 1907, 2092, 2295, 2412
FokI	GGATG	5 cut(s)	643, 1075, 1232, 1289, 1558
FspBI	CTAG	3 cut(s)	231, 1485, 2328
FspI	TGCGCA	1 cut(s)	2215
GsaI	CCCAGC	1 cut(s)	1432
GsuI	CTGGAG	3 cut(s)	732, 1480, 2595
HaeII	RGCGCY	2 cut(s)	867, 2210
HaeIII	GGCC	8 cut(s)	10, 83, 1070, 1312, 2221, 2237, 2407, 2462
HapII	CCGG	9 cut(s)	383, 668, 1101, 1194, 1347, 1405, 2135, 2234, 2483
HgaI	GACGC	3 cut(s)	813, 1062, 1513
Hin1II	CATG	8 cut(s)	491, 916, 1768, 1855, 1911, 2096, 2299, 2416
HincII	GTYRAC	2 cut(s)	54, 2338
HindII	GTYRAC	2 cut(s)	54, 2338
HindIII	AAGCTT	1 cut(s)	188
HinfI	GANTC	6 cut(s)	95, 272, 339, 920, 2339, 2570
HpaII	CCGG	9 cut(s)	383, 668, 1101, 1194, 1347, 1405, 2135, 2234, 2483
HphI	GGTGA	3 cut(s)	1090, 1582, 2266
Hpy166II	GTNNAC	8 cut(s)	54, 243, 463, 724, 895, 1669, 1952, 2338
Hpy188III	TCNNGA	9 cut(s)	92, 1217, 1702, 1871, 1994, 2129, 2135, 2456, 2574
Hpy8I	GTNNAC	8 cut(s)	54, 243, 463, 724, 895, 1669, 1952, 2338
Hpy99I	CGWCG	1 cut(s)	1456
HpyAV	CCTTC	9 cut(s)	38, 47, 67, 318, 1575, 1597, 1603, 2142, 2537
HpyCH4III	ACNGT	5 cut(s)	221, 719, 1330, 1905, 2396
HpyCH4IV	ACGT	5 cut(s)	50, 431, 515, 1260, 1998
HpyF3I	CTNAG	6 cut(s)	1215, 1558, 1599, 2163, 2265, 2332
HpySE526I	ACGT	5 cut(s)	50, 431, 515, 1260, 1998
Hsp92II	CATG	8 cut(s)	491, 916, 1768, 1855, 1911, 2096, 2299, 2416
Kpn2I	TCCGGA	1 cut(s)	2134
KroI	GCCGGC	1 cut(s)	1346
KroNI	GCCGGC	1 cut(s)	1348
LmnI	GCTCC	3 cut(s)	778, 812, 1729
Lsp1109I	GCAGC	7 cut(s)	400, 984, 1764, 1927, 2056, 2356, 2461
LweI	GCATC	1 cut(s)	1210
MaeI	CTAG	3 cut(s)	231, 1485, 2328
MaeII	ACGT	5 cut(s)	50, 431, 515, 1260, 1998
MbiI	CCGCTC	1 cut(s)	449
MfeI	CAATTG	1 cut(s)	2583
MhlI	GDGCHC	1 cut(s)	1140
MluI	ACGCGT	1 cut(s)	822
MlyI	GAGTC	2 cut(s)	914, 2333
MmeI	TCCRAC	4 cut(s)	652, 1101, 1662, 2536
MroI	TCCGGA	1 cut(s)	2134
MroNI	GCCGGC	1 cut(s)	1346
MseI	TTAA	7 cut(s)	375, 525, 603, 1029, 1230, 1247, 1740
MslI	CAYNNNNRTG	4 cut(s)	1151, 1881, 1906, 1968
MspI	CCGG	9 cut(s)	383, 668, 1101, 1194, 1347, 1405, 2135, 2234, 2483
MspR9I	CCNGG	6 cut(s)	384, 750, 1194, 1274, 1314, 2234
MunI	CAATTG	1 cut(s)	2583
MvaI	CCWGG	3 cut(s)	750, 1274, 1314
MvnI	CGCG	9 cut(s)	337, 467, 824, 1073, 1106, 1537, 1703, 1872, 1947
NaeI	GCCGGC	1 cut(s)	1348
NciI	CCSGG	3 cut(s)	384, 1194, 2234
NgoMIV	GCCGGC	1 cut(s)	1346
NheI	GCTAGC	1 cut(s)	2327
NlaIII	CATG	8 cut(s)	491, 916, 1768, 1855, 1911, 2096, 2299, 2416
NlaIV	GGNNCC	4 cut(s)	780, 1192, 1311, 1972
NmuCI	GTSAC	7 cut(s)	89, 221, 499, 544, 1369, 1994, 2578
NruI	TCGCGA	2 cut(s)	1703, 1872
NsbI	TGCGCA	1 cut(s)	2215
NspI	RCATGY	2 cut(s)	916, 1768
OliI	CACNNNNGTG	2 cut(s)	1151, 1968
PaqCI	CACCTGC	1 cut(s)	2242
PauI	GCGCGC	1 cut(s)	1104
PceI	AGGCCT	2 cut(s)	2221, 2407
PcsI	WCGNNNNNNNCGW	1 cut(s)	334
PdiI	GCCGGC	1 cut(s)	1348
PfeI	GAWTC	4 cut(s)	95, 272, 339, 2570
PflMI	CCANNNNNTGG	1 cut(s)	860
PfoI	TCCNGGA	2 cut(s)	748, 1192
PleI	GAGTC	2 cut(s)	914, 2333
PpsI	GAGTC	2 cut(s)	914, 2333
Ppu21I	YACGTR	1 cut(s)	432
PpuMI	RGGWCCY	1 cut(s)	1584
Psp1406I	AACGTT	1 cut(s)	1260
Psp5II	RGGWCCY	1 cut(s)	1584
Psp6I	CCWGG	3 cut(s)	748, 1272, 1312
PspFI	CCCAGC	1 cut(s)	1428
PspGI	CCWGG	3 cut(s)	748, 1272, 1312
PspN4I	GGNNCC	4 cut(s)	780, 1192, 1311, 1972
PspPI	GGNCC	5 cut(s)	1190, 1310, 1584, 1862, 2236
PspPPI	RGGWCCY	1 cut(s)	1584
PstI	CTGCAG	1 cut(s)	2374
PteI	GCGCGC	1 cut(s)	1104
RruI	TCGCGA	2 cut(s)	1703, 1872
RsaI	GTAC	6 cut(s)	533, 1171, 1304, 1670, 1850, 2141
RsaNI	GTAC	6 cut(s)	532, 1170, 1303, 1669, 1849, 2140
RseI	CAYNNNNRTG	4 cut(s)	1151, 1881, 1906, 1968
SaqAI	TTAA	7 cut(s)	375, 525, 603, 1029, 1230, 1247, 1740
Sau96I	GGNCC	5 cut(s)	1190, 1310, 1584, 1862, 2236
ScaI	AGTACT	1 cut(s)	2141
SchI	GAGTC	2 cut(s)	914, 2333
ScrFI	CCNGG	6 cut(s)	384, 750, 1194, 1274, 1314, 2234
SduI	GDGCHC	1 cut(s)	1140
SfaNI	GCATC	1 cut(s)	1210
SfcI	CTRYAG	1 cut(s)	2370
SgrAI	CRCCGGYG	1 cut(s)	1100
SinI	GGWCC	3 cut(s)	1190, 1584, 1862
SmiMI	CAYNNNNRTG	4 cut(s)	1151, 1881, 1906, 1968
SmlI	CTYRAG	2 cut(s)	1422, 1922
SmoI	CTYRAG	2 cut(s)	1422, 1922
SseBI	AGGCCT	2 cut(s)	2221, 2407
SspMI	CTAG	3 cut(s)	231, 1485, 2328
StuI	AGGCCT	2 cut(s)	2221, 2407
StyD4I	CCNGG	6 cut(s)	382, 748, 1192, 1272, 1312, 2232
StyI	CCWWGG	1 cut(s)	1672
TaaI	ACNGT	5 cut(s)	221, 719, 1330, 1905, 2396
TaiI	ACGT	5 cut(s)	53, 434, 518, 1263, 2001
TaqI	TCGA	8 cut(s)	162, 573, 969, 1475, 1889, 2022, 2202, 2301
TatI	WGTACW	3 cut(s)	531, 1848, 2139
TauI	GCSGC	3 cut(s)	1073, 1976, 2465
TfiI	GAWTC	4 cut(s)	95, 272, 339, 2570
Tru1I	TTAA	7 cut(s)	375, 525, 603, 1029, 1230, 1247, 1740
Tru9I	TTAA	7 cut(s)	375, 525, 603, 1029, 1230, 1247, 1740
TscAI	CASTG	7 cut(s)	286, 337, 465, 1120, 1908, 1972, 2285
TseFI	GTSAC	7 cut(s)	89, 221, 499, 544, 1369, 1994, 2578
TseI	GCWGC	7 cut(s)	388, 997, 1777, 1940, 2069, 2369, 2449
Tsp45I	GTSAC	7 cut(s)	89, 221, 499, 544, 1369, 1994, 2578
TspDTI	ATGAA	1 cut(s)	1842
TspGWI	ACGGA	4 cut(s)	487, 563, 649, 2547
TspRI	CASTG	7 cut(s)	286, 337, 465, 1120, 1908, 1972, 2285
Van91I	CCANNNNNTGG	1 cut(s)	860
VpaK11BI	GGWCC	3 cut(s)	1190, 1584, 1862
XagI	CCTNNNNNAGG	1 cut(s)	1579
XapI	RAATTY	5 cut(s)	940, 1179, 1723, 1745, 2029
XceI	RCATGY	2 cut(s)	916, 1768
XspI	CTAG	3 cut(s)	231, 1485, 2328
ZrmI	AGTACT	1 cut(s)	2141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.