Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0011171

Physical Location & Seq

Genomic Coordinates Forward (+)

39515 .. 42267

Gene Structure 2753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1000600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGTCTCTCAGCAGCATAGTGCCAAAACCAGCAGAATATGGCGGCAGCGACAGTAGTTGTACTACTACTGTGGAAGTTTCGCCGGAGATGCCTGCTGGAACCCAGAACAAGGCCGCGCCCGCTACCCAAGTTAATTCACAAGCTTTCCTACAACTAACGTTGTATCCTATAACTTTAAAGTTTGAGGAGGTGTTTTACAAAGTGAAAGTGGAGCAGAAAGGGAGTAGAGGTAGGAGCAGATCTAGAGAAAAGAGTATACTGAGTGGGATAACAGGTATGGTATGTCCAGGAGAGATATTGGCTATGTTAGGGCCATCCGGAAGTGGGAAGACGACCCTTCTTACTTCCCTGGGAGGGCGCCTCAATCATCAGAATAACGTTAAGTTCATGTCAGGAAAGATCAGCTACAACGGCCAGCCATTCTGCGGCGCCATCAAAAGACGAACGGGATTCGTTGCCCAGGACGACGTTCTGTACCCGCATCTCACGGTGACTGAGACTCTTGTGTTCACGGCTCTCCTGAGGCTGCCCAACAGCCTGAGCCGGGACGAGAAAGTGCAGCACGTGGAGCAGGTGATCAGCGAGCTGGGATTGACTCAGTGCCGGAGCAGCATGATAGGGGGGCCACTGTTTAGAGGGATCTCAGGGGGAGAGAAGAAGAGGGTGAGTATAGGTCAAGAGATGCTGATTAACCCGAGCTTACTTTTATTGGATGAGCCCACCTCAGGGTTGGACTCCACTACAGCTCAGCGGATCCTGATCACACTCAAAAGGCTTGCGAGTGGGGGCCGAACCCTTGTCACCACCATCCACCAGCCCTCCAGCCGCATCTACCACATGTTTGATAAGCTCGTCCTGCTTTCCGAGGGCTCCCCCATTTATTATGGCCCTGCTTCTGCGGCCCTCAATTATTTTTCCTCCATCGGTTTCTCCACGTCCTTGCCTAGTGTGAATCCTGCTGATCTTTTGCTGGATCTTGCTAACGGAATCGCCCCTGATTCCCAACATGCATCTGAGCAGTGGGAGAACACGAACGCGGAACAAGAGCAGAAAATGGTGAGAAAAGCTCTCATTTCTGCCTACGATAAGAACATTTACGCAAAGTTGAAAGATGAGCTCTGTGCTGGTTTGGAGGTCAATAACTACGACAATTACATGAAAGGAGCTGCTTCTGCAAAGCAATATTGGTGTACAAGCTGGTGGCACCAGTTCAAGGTGCTGTTTCAGAGGGGGTTAAGGGAGAGAAGGTATGAAGCCTTCAACAGGCTACGGATTTTCCAAGTAGTAAGTGTGGCCACGCTTGGTGGACTCCTCTGGTGGCGTACACCCACGTCTCACATTGAAGACCGTATCGCTTTGCTCTTCTTCTTCTCCGTATTTTGGGGGTTCTACCCACTGTACAATGCAGTGTTCACATTTCCCCAGGAGAGAAGGATGCTGATAAAAGAACGATCCTCGGGAATGTACCAGCTTTCATCCTACTTCCTAGCAAGAACAGTTGGAGACCTGCCGCTGGAGCTGGCACTGCCAACAGCATTTGTGTTAATAATCTATTGGATGGGAGGGCTTAAACCGGACCCCTTCACGTTCATCCTGTCCCTGCTCGTGGTTCTGTACAGCGTGCTGGTCTCCCAAAGCCTAGGGTTAGCCATTGGTGCCATTCTGATGGACATAAAGCAAGCCACCACTTTGGCGTCGGTTACAACACTTGTCTTCCTCATCGCCGGGGGTTACTACATTCAACAGATTCCTCCCTTTATCGTGTGGCTGAAGTACTTAAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGGGTCCAATACGACGAGGACGACTTTTATGAGTGCTCCAAAGGAGTCTTGTGCCGAGTTGGAGATTTGCCTGCCGTCAAATCCATGGGTGGTCTCGACCACTTGTGGCTCGATGTCTCCATTCTCGGCTTAATGTTACTTGGCTACCGCCTTCTTGCTTATCTTGCACTCCATCGAGTGCGCTTGAGGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

669

Amino Acids

74.49

Weight (kDa)

9.1

Isoelectric Point (pI)

48.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	89 - 242	4.1e-25	ABC transporter
ABC2_membrane_7	PF19055	271 - 341	9.6e-10	ABC-2 type transporter
ABC2_membrane	PF01061	402 - 608	4.2e-43	ABC-2 type transporter
ABC2_membrane_3	PF12698	453 - 659	8.7e-10	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31770
fragaria_vesca	FvH4_2g37300 FvH4_2g37300 FvH4_2g37300 FvH4_2g37300
malus_domestica	MD08G1001300.v1.1 MD15G1000600.v1.1
prunus_persica	Prupe.1G353300_v2.0.a1
pyrus_communis	pycom08g00070
rosa_chinensis	RchiOBHm_Chr6g0304401
rosa_laevigata	RLG00000010982
rosa_multiflora	Rmu_ssc0000218.1_g000046
rosa_roxburghii	Rroxscaffold_7G00163770
rosa_rugosa	Rorug06G0331100 Rorug06G0331200
rosa_samantha	Rh6AG444100 Rh6BG458300 Rh6CG456900 Rh6DG443600
rosa_wichuraiana	Rw6G038550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	562
Acc36I	ACCTGC	2 cut(s)	562, 1515
AccB1I	GGYRCC	4 cut(s)	357, 428, 1203, 1655
AccI	GTMKAC	1 cut(s)	256
AccII	CGCG	2 cut(s)	116, 1037
AccIII	TCCGGA	1 cut(s)	317
AclI	AACGTT	2 cut(s)	158, 378
AclWI	GGATC	5 cut(s)	647, 748, 761, 981, 1446
AcoI	YGGCCR	2 cut(s)	412, 1293
AcuI	CTGAAG	1 cut(s)	1790
AcvI	CACGTG	1 cut(s)	565
AcyI	GRCGYC	3 cut(s)	358, 429, 1694
AfaI	GTAC	8 cut(s)	61, 476, 1192, 1324, 1400, 1466, 1616, 1775
AflII	CTTAAG	1 cut(s)	1777
AflIII	ACRYGT	1 cut(s)	837
AgsI	TTSAA	5 cut(s)	1108, 1213, 1261, 1343, 1742
AjiI	CACGTC	2 cut(s)	936, 1332
AjnI	CCWGG	4 cut(s)	286, 348, 459, 1422
Alw21I	GWGCWC	2 cut(s)	1119, 1850
Alw26I	GTCTC	7 cut(s)	9, 491, 1338, 1497, 1633, 1910, 1933
AlwI	GGATC	5 cut(s)	647, 748, 761, 981, 1446
Ama87I	CYCGRG	2 cut(s)	694, 1456
Aor13HI	TCCGGA	1 cut(s)	317
AoxI	GGCC	8 cut(s)	111, 311, 412, 623, 787, 886, 900, 1293
ApeKI	GCWGC	6 cut(s)	12, 45, 526, 559, 609, 1166
AspA2I	CCTAGG	1 cut(s)	1639
AspLEI	GCGC	4 cut(s)	118, 360, 431, 1995
AspS9I	GGNCC	7 cut(s)	311, 623, 787, 887, 901, 1576, 1816
AsuC2I	CCSGG	2 cut(s)	545, 1726
AsuHPI	GGTGA	5 cut(s)	502, 586, 676, 793, 1069
AvaI	CYCGRG	2 cut(s)	694, 1456
AvaII	GGWCC	2 cut(s)	1576, 1816
AvrII	CCTAGG	1 cut(s)	1639
AxyI	CCTNAGG	2 cut(s)	521, 724
BalI	TGGCCA	1 cut(s)	1295
BamHI	GGATCC	1 cut(s)	753
BanI	GGYRCC	4 cut(s)	357, 428, 1203, 1655
BanII	GRGCYC	3 cut(s)	720, 872, 1119
BarI	GAAGNNNNNNTAC	2 cut(s)	1241, 1273
BauI	CACGAG	1 cut(s)	1604
BbrPI	CACGTG	1 cut(s)	565
BbsI	GAAGAC	3 cut(s)	335, 1350, 1705
Bbv12I	GWGCWC	2 cut(s)	1119, 1850
BbvI	GCAGC	6 cut(s)	24, 57, 513, 571, 621, 1153
BccI	CCATC	7 cut(s)	322, 440, 815, 929, 1552, 1660, 1992
BceAI	ACGGC	3 cut(s)	427, 528, 1871
BciT130I	CCWGG	4 cut(s)	288, 350, 461, 1424
BciVI	GTATCC	1 cut(s)	174
BclI	TGATCA	2 cut(s)	576, 759
BcnI	CCSGG	2 cut(s)	545, 1726
BcoDI	GTCTC	7 cut(s)	9, 491, 1338, 1497, 1633, 1910, 1933
BfaI	CTAG	4 cut(s)	243, 945, 1487, 1640
BfmI	CTRYAG	2 cut(s)	741, 1783
BfoI	RGCGCY	2 cut(s)	361, 432
BfrI	CTTAAG	1 cut(s)	1777
BfuAI	ACCTGC	2 cut(s)	562, 1515
BfuI	GTATCC	1 cut(s)	174
BglII	AGATCT	1 cut(s)	239
BlnI	CCTAGG	1 cut(s)	1639
BlpI	GCTNAGC	1 cut(s)	747
BmcAI	AGTACT	1 cut(s)	1775
Bme1390I	CCNGG	6 cut(s)	288, 350, 461, 545, 1424, 1726
Bme18I	GGWCC	2 cut(s)	1576, 1816
BmeT110I	CYCGRG	2 cut(s)	694, 1456
BmgBI	CACGTC	2 cut(s)	936, 1332
BmgT120I	GGNCC	7 cut(s)	311, 623, 787, 887, 901, 1576, 1816
BmrFI	CCNGG	6 cut(s)	288, 350, 461, 545, 1424, 1726
BmsI	GCATC	6 cut(s)	78, 490, 672, 837, 1019, 1425
BpiI	GAAGAC	3 cut(s)	335, 1350, 1705
BplI	GAGNNNNNCTC	6 cut(s)	345, 377, 707, 739, 1051, 1083
BpmI	CTGGAG	2 cut(s)	805, 1535
Bpu10I	CCTNAGC	1 cut(s)	539
Bpu1102I	GCTNAGC	1 cut(s)	747
BpuMI	CCSGG	2 cut(s)	545, 1726
BsaAI	YACGTR	1 cut(s)	565
BsaBI	GATNNNNATC	1 cut(s)	758
BsaHI	GRCGYC	3 cut(s)	358, 429, 1694
BsaI	GGTCTC	3 cut(s)	1497, 1633, 1910
BsaJI	CCNNGG	9 cut(s)	348, 349, 459, 864, 1422, 1455, 1639, 1725, 1896
BsaWI	WCCGGW	2 cut(s)	317, 1573
BsaXI	ACNNNNNCTCC	6 cut(s)	214, 244, 803, 833, 1232, 1262
Bse1I	ACTGG	1 cut(s)	1207
Bse21I	CCTNAGG	2 cut(s)	521, 724
Bse8I	GATNNNNATC	1 cut(s)	758
BseAI	TCCGGA	1 cut(s)	317
BseBI	CCWGG	4 cut(s)	288, 350, 461, 1424
BseDI	CCNNGG	9 cut(s)	348, 349, 459, 864, 1422, 1455, 1639, 1725, 1896
BseGI	GGATG	7 cut(s)	314, 718, 807, 1440, 1475, 1563, 1590
BseJI	GATNNNNATC	1 cut(s)	758
BseNI	ACTGG	1 cut(s)	1207
BseRI	GAGGAG	2 cut(s)	200, 1301
BseXI	GCAGC	6 cut(s)	24, 57, 513, 571, 621, 1153
BseYI	CCCAGC	1 cut(s)	586
BsgI	GTGCAG	1 cut(s)	578
Bsh1236I	CGCG	2 cut(s)	116, 1037
BshFI	GGCC	8 cut(s)	113, 313, 414, 625, 789, 888, 902, 1295
BshNI	GGYRCC	4 cut(s)	357, 428, 1203, 1655
BsiHKAI	GWGCWC	2 cut(s)	1119, 1850
BsiHKCI	CYCGRG	2 cut(s)	694, 1456
BsiSI	CCGG	6 cut(s)	83, 318, 544, 604, 1574, 1725
BslFI	GGGAC	2 cut(s)	560, 1582
BsmAI	GTCTC	7 cut(s)	9, 491, 1338, 1497, 1633, 1910, 1933
BsmBI	CGTCTC	1 cut(s)	1338
BsmFI	GGGAC	2 cut(s)	560, 1582
BsnI	GGCC	8 cut(s)	113, 313, 414, 625, 789, 888, 902, 1295
Bso31I	GGTCTC	3 cut(s)	1497, 1633, 1910
BsoBI	CYCGRG	2 cut(s)	694, 1456
Bsp1286I	GDGCHC	4 cut(s)	720, 872, 1119, 1850
Bsp13I	TCCGGA	1 cut(s)	317
Bsp1407I	TGTACA	3 cut(s)	1190, 1398, 1614
Bsp143I	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
Bsp1720I	GCTNAGC	1 cut(s)	747
Bsp19I	CCATGG	1 cut(s)	1896
BspANI	GGCC	8 cut(s)	113, 313, 414, 625, 789, 888, 902, 1295
BspEI	TCCGGA	1 cut(s)	317
BspFNI	CGCG	2 cut(s)	116, 1037
BspMI	ACCTGC	2 cut(s)	562, 1515
BspPI	GGATC	5 cut(s)	647, 748, 761, 981, 1446
BspQI	GCTCTTC	1 cut(s)	1367
BspT107I	GGYRCC	4 cut(s)	357, 428, 1203, 1655
BspTI	CTTAAG	1 cut(s)	1777
BspTNI	GGTCTC	3 cut(s)	1497, 1633, 1910
BsrGI	TGTACA	3 cut(s)	1190, 1398, 1614
BsrI	ACTGG	1 cut(s)	1207
BssECI	CCNNGG	9 cut(s)	348, 349, 459, 864, 1422, 1455, 1639, 1725, 1896
BssMI	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
BssNAI	GTATAC	1 cut(s)	257
BssNI	GRCGYC	3 cut(s)	358, 429, 1694
BssSI	CACGAG	1 cut(s)	1604
BssT1I	CCWWGG	2 cut(s)	1639, 1896
Bst1107I	GTATAC	1 cut(s)	257
Bst2BI	CACGAG	1 cut(s)	1604
Bst2UI	CCWGG	4 cut(s)	288, 350, 461, 1424
Bst4CI	ACNGT	8 cut(s)	53, 70, 490, 630, 1349, 1398, 1498, 1796
Bst6I	CTCTTC	2 cut(s)	653, 1367
BstACI	GRCGYC	3 cut(s)	358, 429, 1694
BstAFI	CTTAAG	1 cut(s)	1777
BstAUI	TGTACA	3 cut(s)	1190, 1398, 1614
BstBAI	YACGTR	1 cut(s)	565
BstC8I	GCNNGC	9 cut(s)	93, 120, 416, 584, 777, 1521, 1622, 1680, 1884
BstDSI	CCRYGG	1 cut(s)	1896
BstENI	CCTNNNNNAGG	1 cut(s)	1261
BstF5I	GGATG	7 cut(s)	314, 718, 807, 1440, 1475, 1563, 1590
BstFNI	CGCG	2 cut(s)	116, 1037
BstH2I	RGCGCY	2 cut(s)	361, 432
BstHHI	GCGC	4 cut(s)	118, 360, 431, 1995
BstKTI	GATC	9 cut(s)	242, 402, 579, 642, 756, 762, 964, 976, 1454
BstMAI	GTCTC	7 cut(s)	9, 491, 1338, 1497, 1633, 1910, 1933
BstMBI	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
BstNI	CCWGG	4 cut(s)	288, 350, 461, 1424
BstNSI	RCATGY	2 cut(s)	841, 1010
BstSCI	CCNGG	6 cut(s)	286, 348, 459, 543, 1422, 1724
BstSFI	CTRYAG	2 cut(s)	741, 1783
BstUI	CGCG	2 cut(s)	116, 1037
BstV1I	GCAGC	6 cut(s)	24, 57, 513, 571, 621, 1153
BstV2I	GAAGAC	3 cut(s)	335, 1350, 1705
BstX2I	RGATCY	4 cut(s)	239, 639, 753, 973
BstXI	CCANNNNNNTGG	2 cut(s)	1666, 1690
BstYI	RGATCY	4 cut(s)	239, 639, 753, 973
BstZ17I	GTATAC	1 cut(s)	257
Bsu36I	CCTNAGG	2 cut(s)	521, 724
BsuI	GTATCC	1 cut(s)	174
BsuRI	GGCC	8 cut(s)	113, 313, 414, 625, 789, 888, 902, 1295
BtgI	CCRYGG	1 cut(s)	1896
BtgZI	GCGATG	1 cut(s)	1705
BtrI	CACGTC	2 cut(s)	936, 1332
BtsCI	GGATG	7 cut(s)	314, 718, 807, 1440, 1475, 1563, 1590
BtsI	GCAGTG	3 cut(s)	1025, 1413, 1523
BtsIMutI	CAGTG	6 cut(s)	605, 626, 1025, 1394, 1413, 1523
BveI	ACCTGC	2 cut(s)	562, 1515
Cac8I	GCNNGC	9 cut(s)	93, 120, 416, 584, 777, 1521, 1622, 1680, 1884
CfoI	GCGC	4 cut(s)	118, 360, 431, 1995
Cfr13I	GGNCC	7 cut(s)	311, 623, 787, 887, 901, 1576, 1816
CseI	GACGC	1 cut(s)	1683
Csp6I	GTAC	8 cut(s)	60, 475, 1191, 1323, 1399, 1465, 1615, 1774
CviAII	CATG	6 cut(s)	388, 613, 838, 1007, 1156, 1897
CviQI	GTAC	8 cut(s)	60, 475, 1191, 1323, 1399, 1465, 1615, 1774
DinI	GGCGCC	2 cut(s)	359, 430
DpnI	GATC	9 cut(s)	241, 401, 578, 641, 755, 761, 963, 975, 1453
DpnII	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
DraI	TTTAAA	1 cut(s)	177
EaeI	YGGCCR	2 cut(s)	412, 1293
Eam1104I	CTCTTC	2 cut(s)	653, 1367
EarI	CTCTTC	2 cut(s)	653, 1367
Ecl136II	GAGCTC	1 cut(s)	1117
Eco130I	CCWWGG	2 cut(s)	1639, 1896
Eco24I	GRGCYC	3 cut(s)	720, 872, 1119
Eco31I	GGTCTC	3 cut(s)	1497, 1633, 1910
Eco47I	GGWCC	2 cut(s)	1576, 1816
Eco53kI	GAGCTC	1 cut(s)	1117
Eco57I	CTGAAG	1 cut(s)	1790
Eco72I	CACGTG	1 cut(s)	565
Eco81I	CCTNAGG	2 cut(s)	521, 724
Eco88I	CYCGRG	2 cut(s)	694, 1456
EcoICRI	GAGCTC	1 cut(s)	1117
EcoNI	CCTNNNNNAGG	1 cut(s)	1261
EcoRII	CCWGG	4 cut(s)	286, 348, 459, 1422
EcoT14I	CCWWGG	2 cut(s)	1639, 1896
EcoT22I	ATGCAT	1 cut(s)	1012
EcoT38I	GRGCYC	3 cut(s)	720, 872, 1119
EgeI	GGCGCC	2 cut(s)	359, 430
EheI	GGCGCC	2 cut(s)	359, 430
ErhI	CCWWGG	2 cut(s)	1639, 1896
Esp3I	CGTCTC	1 cut(s)	1338
FaeI	CATG	6 cut(s)	391, 616, 841, 1010, 1159, 1900
FaqI	GGGAC	2 cut(s)	560, 1582
FatI	CATG	6 cut(s)	387, 612, 837, 1006, 1155, 1896
FauI	CCCGC	2 cut(s)	127, 486
FbaI	TGATCA	2 cut(s)	576, 759
FblI	GTMKAC	1 cut(s)	256
FokI	GGATG	7 cut(s)	301, 725, 794, 1447, 1462, 1570, 1577
FriOI	GRGCYC	3 cut(s)	720, 872, 1119
FspBI	CTAG	4 cut(s)	243, 945, 1487, 1640
GlaI	GCGC	4 cut(s)	117, 359, 430, 1994
GsaI	CCCAGC	1 cut(s)	590
GsuI	CTGGAG	2 cut(s)	805, 1535
HaeII	RGCGCY	2 cut(s)	361, 432
HaeIII	GGCC	8 cut(s)	113, 313, 414, 625, 789, 888, 902, 1295
HapII	CCGG	6 cut(s)	83, 318, 544, 604, 1574, 1725
HgaI	GACGC	1 cut(s)	1683
HhaI	GCGC	4 cut(s)	118, 360, 431, 1995
Hin1I	GRCGYC	3 cut(s)	358, 429, 1694
Hin1II	CATG	6 cut(s)	391, 616, 841, 1010, 1159, 1900
Hin6I	GCGC	4 cut(s)	116, 358, 429, 1993
HinP1I	GCGC	4 cut(s)	116, 358, 429, 1993
HindIII	AAGCTT	2 cut(s)	141, 1802
HpaII	CCGG	6 cut(s)	83, 318, 544, 604, 1574, 1725
HphI	GGTGA	5 cut(s)	502, 586, 676, 793, 1069
Hpy166II	GTNNAC	6 cut(s)	257, 510, 1191, 1307, 1325, 1413
Hpy188I	TCNGA	5 cut(s)	372, 865, 1015, 1227, 1665
Hpy188III	TCNNGA	8 cut(s)	243, 318, 393, 520, 677, 757, 1458, 1907
Hpy8I	GTNNAC	6 cut(s)	257, 510, 1191, 1307, 1325, 1413
Hpy99I	CGWCG	3 cut(s)	470, 1699, 1829
HpyAV	CCTTC	6 cut(s)	347, 1239, 1267, 1425, 1591, 1973
HpyCH4III	ACNGT	8 cut(s)	53, 70, 490, 630, 1349, 1398, 1498, 1796
HpyCH4IV	ACGT	7 cut(s)	158, 378, 468, 564, 935, 1331, 1586
HpyCH4V	TGCA	5 cut(s)	559, 1010, 1175, 1406, 1979
HpySE526I	ACGT	7 cut(s)	158, 378, 468, 564, 935, 1331, 1586
Hsp92I	GRCGYC	3 cut(s)	358, 429, 1694
Hsp92II	CATG	6 cut(s)	391, 616, 841, 1010, 1159, 1900
HspAI	GCGC	4 cut(s)	116, 358, 429, 1993
KasI	GGCGCC	2 cut(s)	357, 428
Kpn2I	TCCGGA	1 cut(s)	317
Ksp22I	TGATCA	2 cut(s)	576, 759
Kzo9I	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
LguI	GCTCTTC	1 cut(s)	1367
LmnI	GCTCC	8 cut(s)	211, 234, 568, 606, 875, 1163, 1516, 1853
Lsp1109I	GCAGC	6 cut(s)	24, 57, 513, 571, 621, 1153
LweI	GCATC	6 cut(s)	78, 490, 672, 837, 1019, 1425
MaeI	CTAG	4 cut(s)	243, 945, 1487, 1640
MaeII	ACGT	7 cut(s)	158, 378, 468, 564, 935, 1331, 1586
MaeIII	GTNAC	6 cut(s)	490, 799, 1699, 1730, 1796, 1947
MalI	GATC	9 cut(s)	241, 401, 578, 641, 755, 761, 963, 975, 1453
MboI	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
MboII	GAAGA	9 cut(s)	340, 667, 670, 1354, 1355, 1357, 1360, 1705, 1799
MflI	RGATCY	4 cut(s)	239, 639, 753, 973
MhlI	GDGCHC	4 cut(s)	720, 872, 1119, 1850
MlsI	TGGCCA	1 cut(s)	1295
MluCI	AATT	3 cut(s)	133, 907, 1150
MluNI	TGGCCA	1 cut(s)	1295
Mly113I	GGCGCC	2 cut(s)	358, 429
MlyI	GAGTC	5 cut(s)	493, 589, 728, 1302, 1866
MmeI	TCCRAC	3 cut(s)	711, 1480, 1852
Mox20I	TGGCCA	1 cut(s)	1295
Mph1103I	ATGCAT	1 cut(s)	1012
MroI	TCCGGA	1 cut(s)	317
MscI	TGGCCA	1 cut(s)	1295
MseI	TTAA	9 cut(s)	132, 176, 381, 690, 1235, 1544, 1569, 1778, 1943
MslI	CAYNNNNRTG	1 cut(s)	1664
Msp20I	TGGCCA	1 cut(s)	1295
MspA1I	CMGCKG	2 cut(s)	751, 1513
MspCI	CTTAAG	1 cut(s)	1777
MspI	CCGG	6 cut(s)	83, 318, 544, 604, 1574, 1725
MspR9I	CCNGG	6 cut(s)	288, 350, 461, 545, 1424, 1726
MvaI	CCWGG	4 cut(s)	288, 350, 461, 1424
MvnI	CGCG	2 cut(s)	116, 1037
NarI	GGCGCC	2 cut(s)	358, 429
NciI	CCSGG	2 cut(s)	545, 1726
NcoI	CCATGG	1 cut(s)	1896
NdeII	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
NlaIII	CATG	6 cut(s)	391, 616, 841, 1010, 1159, 1900
NmeAIII	GCCGAG	2 cut(s)	1892, 1917
NmuCI	GTSAC	2 cut(s)	490, 799
NsiI	ATGCAT	1 cut(s)	1012
NspI	RCATGY	2 cut(s)	841, 1010
PaqCI	CACCTGC	1 cut(s)	562
PasI	CCCWGGG	1 cut(s)	349
PciI	ACATGT	1 cut(s)	837
PciSI	GCTCTTC	1 cut(s)	1367
PcsI	WCGNNNNNNNCGW	1 cut(s)	1830
PfeI	GAWTC	5 cut(s)	450, 952, 987, 998, 1747
PfoI	TCCNGGA	1 cut(s)	286
PleI	GAGTC	5 cut(s)	493, 589, 728, 1302, 1865
PluTI	GGCGCC	2 cut(s)	361, 432
PmaCI	CACGTG	1 cut(s)	565
PmlI	CACGTG	1 cut(s)	565
PpsI	GAGTC	5 cut(s)	493, 589, 728, 1302, 1865
Ppu21I	YACGTR	1 cut(s)	565
PscI	ACATGT	1 cut(s)	837
Psp124BI	GAGCTC	1 cut(s)	1119
Psp1406I	AACGTT	2 cut(s)	158, 378
Psp6I	CCWGG	4 cut(s)	286, 348, 459, 1422
PspCI	CACGTG	1 cut(s)	565
PspFI	CCCAGC	1 cut(s)	586
PspGI	CCWGG	4 cut(s)	286, 348, 459, 1422
PspPI	GGNCC	7 cut(s)	311, 623, 787, 887, 901, 1576, 1816
PsuI	RGATCY	4 cut(s)	239, 639, 753, 973
RsaI	GTAC	8 cut(s)	61, 476, 1192, 1324, 1400, 1466, 1616, 1775
RsaNI	GTAC	8 cut(s)	60, 475, 1191, 1323, 1399, 1465, 1615, 1774
RseI	CAYNNNNRTG	1 cut(s)	1664
SacI	GAGCTC	1 cut(s)	1119
SapI	GCTCTTC	1 cut(s)	1367
SaqAI	TTAA	9 cut(s)	132, 176, 381, 690, 1235, 1544, 1569, 1778, 1943
Sau3AI	GATC	9 cut(s)	239, 399, 576, 639, 753, 759, 961, 973, 1451
Sau96I	GGNCC	7 cut(s)	311, 623, 787, 887, 901, 1576, 1816
ScaI	AGTACT	1 cut(s)	1775
SchI	GAGTC	5 cut(s)	493, 589, 728, 1302, 1866
ScrFI	CCNGG	6 cut(s)	288, 350, 461, 545, 1424, 1726
SduI	GDGCHC	4 cut(s)	720, 872, 1119, 1850
SfaNI	GCATC	6 cut(s)	78, 490, 672, 837, 1019, 1425
SfcI	CTRYAG	2 cut(s)	741, 1783
SfoI	GGCGCC	2 cut(s)	359, 430
SinI	GGWCC	2 cut(s)	1576, 1816
SmiMI	CAYNNNNRTG	1 cut(s)	1664
SmlI	CTYRAG	2 cut(s)	1777, 1996
SmoI	CTYRAG	2 cut(s)	1777, 1996
Sse9I	AATT	3 cut(s)	133, 907, 1150
SspDI	GGCGCC	2 cut(s)	357, 428
SspI	AATATT	1 cut(s)	1184
SspMI	CTAG	4 cut(s)	243, 945, 1487, 1640
SstI	GAGCTC	1 cut(s)	1119
StyD4I	CCNGG	6 cut(s)	286, 348, 459, 543, 1422, 1724
StyI	CCWWGG	2 cut(s)	1639, 1896
TaaI	ACNGT	8 cut(s)	53, 70, 490, 630, 1349, 1398, 1498, 1796
TaiI	ACGT	7 cut(s)	161, 381, 471, 567, 938, 1334, 1589
TaqI	TCGA	3 cut(s)	1908, 1923, 1987
TasI	AATT	3 cut(s)	133, 907, 1150
TatI	WGTACW	5 cut(s)	59, 1190, 1398, 1614, 1773
TauI	GCSGC	6 cut(s)	45, 116, 429, 828, 902, 1513
TfiI	GAWTC	5 cut(s)	450, 952, 987, 998, 1747
Tru1I	TTAA	9 cut(s)	132, 176, 381, 690, 1235, 1544, 1569, 1778, 1943
Tru9I	TTAA	9 cut(s)	132, 176, 381, 690, 1235, 1544, 1569, 1778, 1943
TscAI	CASTG	6 cut(s)	605, 633, 1025, 1401, 1413, 1530
TseFI	GTSAC	2 cut(s)	490, 799
TseI	GCWGC	6 cut(s)	12, 45, 526, 559, 609, 1166
Tsp45I	GTSAC	2 cut(s)	490, 799
TspDTI	ATGAA	5 cut(s)	376, 1172, 1266, 1464, 1579
TspGWI	ACGGA	3 cut(s)	999, 1285, 1363
TspRI	CASTG	6 cut(s)	605, 633, 1025, 1401, 1413, 1530
Vha464I	CTTAAG	1 cut(s)	1777
VpaK11BI	GGWCC	2 cut(s)	1576, 1816
XagI	CCTNNNNNAGG	1 cut(s)	1261
XbaI	TCTAGA	1 cut(s)	242
XceI	RCATGY	2 cut(s)	841, 1010
XcmI	CCANNNNNNNNNTGG	1 cut(s)	727
XmaJI	CCTAGG	1 cut(s)	1639
XmiI	GTMKAC	1 cut(s)	256
XspI	CTAG	4 cut(s)	243, 945, 1487, 1640
ZrmI	AGTACT	1 cut(s)	1775
Zsp2I	ATGCAT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.