Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0011171

Physical Location & Seq

Genomic Coordinates Forward (+)

96495 .. 99160

Gene Structure 2666 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g00070.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGCATATCGAAAAGCTATATATTTATGTGCTCCCAGGCTCGTTCGCTTTGGGACGCCAACTTAAATCAAGCCAACTCAAGTACGCCTACGTACTTGTGCCCTTCCCCAACCATCGCACGCAACAAAATTATCGAAAAAAGGATAAAATACAAACATTCTACTTTGCAATGTCTCTCAGCAGCATAGTGCCAAAACCAGCAGAATATGGCGGCAGCGACAGTACTTCTGCTACTGCTGTTGAAGGTTCGCCGGAGATGCCTGCTGGAACCCAGAACAAGGCAGCGCCCGCCACCCAAGTTAATTCGCAAGCTTTCCTACAACTGACGTTGTACCCTATAACTTTAAAGTTTGAGGAGGTGTTTTACAAAGTGAAAGTGGACCAGAAAGGGAGTAGGGATAGCAGCAGATCTAGAGAAAAAAGTATACTGAGTGGGATAACAGGTATGGTATGTCCGGGAGAGATACTAGCCATGTTAGGGCCATCTGGAAGTGGGAAGACGACCCTCCTTACTGCCCTGGGAGGGCGCCTCAATCATCAGAATAACAGCAAGTTCATGTCAGGCAAGATCAGCTACAACGGCCAGTCATTCTGCGGCGCCATCAAACGACGAACGGGATTCGTTGCCCAAGACGACGTTCTGTACCCGCATCTCACCGTGACTGAGACTCTTGTGTTCACGGCTATGCTGAGGCTGCCCAACAGCCTAAGCCGGGACGAGAAAGTGCAGCACGTGGAGCACGTTATCAGCGAGCTGGGCTTGACTCGGTGCCGGAGCAGCATGATAGGGGGCCCACTGTTTAGAGGGATATCAGGGGGTGAGAAGAAGAGGGTGAGTATAGGTCAAGAGATGCTGATTAACCCGAGCTTACTTTTGCTGGATGAGCCCACCTCAGGGTTGGACTCCACTACAGCTCAGCGGATCCTGACCACACTCAAAAGGCTTGCTAGTGGGGGCCGAACCCTTGTCACCACCATCCACCAGCCCTCCAGCCGCATCTACCACATGTTTGATAAGCTCGTCCTGCTTTCCGAGGGCTCACCCATTTATTATGGCCCTGCTTCTGCGGCCCTAGATTATTTTTCCTCCATCGGTTTCTCCACGTCCTTGCCTAGTGTTAATCCTGCTGATCTTTTGCTGGATCTTGCTAACGGAATCGCCCCTGATTCCAAACATGCATGTGAGCAGCGCGAGAATACGAACACGGAACAGGAGCAACAGATGGTGAGAAAAGCTCTCATTTCTGCCTACGATAAGAACATTTATGCAAAGTTGAAAGATGAGCTCTGTGCTGGTTTGGAGGTCAACAACTACAACAATTACATGAAAGAAGCTGCTTCTGCAAAGCAATATTGGTGTACAAGCTGGTGGCACCAGTTCAAGGTGCTGCTTCAGAGGGGGTTAAGGGAGCGAAGGTACGAAGCCTTCAACAGGCTAAGGATTTTCCAAGTAATAAGTGTGGCCACGCTTGGTGGACTCCTCTGGTGGCGCACACCCACTTCTCACATTGAAGACCGTATCGCTTTGCTCTTCTTCTTCTCAGTGTTCTGGGGGTTCTACCCACTGTACAATGCAGTGTTCACATTTCCCCAGGAGAGAAGGATGCTGATAAAAGAACGATCATCGGGAATGTACCGGCTTTCATCGTACTTCCTTGCAAGAACAGTTGGAGACCTGCCGCTGGAGCTGGCACTGCCAACGGCATTTGTGTTGATAATCTATTGGATGGGAGGGCTTAAACCGGACCCCTTTACATTCATCCTGTCCCTGCTCGTGGTTCTGTACAACGTGCTGGTCTCCCAAAGCCTAGGGTTAGCCATTGGTGCCATTCTGATGGACATAAAGCAAGCCACCACTTTGGCCTCGGTTACAACACTTGTCTTCCTCATCGCCGGGGGTTACTACATTCAACAGATTCCCCCCTTCATCGTGTGGCTCAAGTACTTGAGTTATAGCTACTACTGTTACAAGCTTCTTCTTGGGGTCCAATACGATGAGGATGACTTTTATGAGTGCTCCAAGGGTGTCTTGTGCCGAGTCGGAGATTTGCCCGCCATCAAATCCATGGGCGGTCTCGAACACTTGTGGCTCGATGTCTCCATTCTCGCCTTAATGTTACTGGGTTACCGCCTTCTTGCTTATCTTGCACTCCATCGAGTGCGCTTGAGGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

725

Amino Acids

81.25

Weight (kDa)

9.32

Isoelectric Point (pI)

48.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31770
fragaria_vesca	FvH4_2g37300 FvH4_2g37300 FvH4_2g37300 FvH4_2g37300
malus_domestica	MD08G1001300.v1.1 MD15G1000600.v1.1
prunus_persica	Prupe.1G353300_v2.0.a1
pyrus_communis	pycom08g00070
rosa_chinensis	RchiOBHm_Chr6g0304401
rosa_laevigata	RLG00000010982
rosa_multiflora	Rmu_ssc0000218.1_g000046
rosa_roxburghii	Rroxscaffold_7G00163770
rosa_rugosa	Rorug06G0331100 Rorug06G0331200
rosa_samantha	Rh6AG444100 Rh6BG458300 Rh6CG456900 Rh6DG443600
rosa_wichuraiana	Rw6G038550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1683
AccB1I	GGYRCC	5 cut(s)	525, 596, 768, 1371, 1823
AccI	GTMKAC	1 cut(s)	424
AccII	CGCG	1 cut(s)	1191
AclWI	GGATC	3 cut(s)	916, 929, 1149
AcoI	YGGCCR	2 cut(s)	580, 1461
AcuI	CTGAAG	1 cut(s)	1376
AcvI	CACGTG	1 cut(s)	733
AcyI	GRCGYC	3 cut(s)	55, 526, 597
AflIII	ACRYGT	1 cut(s)	1005
AgsI	TTSAA	6 cut(s)	242, 1276, 1381, 1429, 1511, 1910
AjiI	CACGTC	1 cut(s)	1104
AjnI	CCWGG	3 cut(s)	34, 516, 1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	621, 653
Alw21I	GWGCWC	4 cut(s)	33, 741, 1287, 2018
Alw26I	GTCTC	6 cut(s)	177, 659, 1665, 1801, 2078, 2101
AlwI	GGATC	3 cut(s)	916, 929, 1149
Ama87I	CYCGRG	1 cut(s)	862
AoxI	GGCC	8 cut(s)	479, 580, 790, 955, 1054, 1068, 1461, 1860
ApaI	GGGCCC	1 cut(s)	794
AspA2I	CCTAGG	1 cut(s)	1807
AspLEI	GCGC	6 cut(s)	286, 528, 599, 1191, 1491, 2163
AspS9I	GGNCC	9 cut(s)	379, 479, 790, 791, 955, 1055, 1069, 1744, 1984
AsuC2I	CCSGG	3 cut(s)	456, 713, 1894
AsuHPI	GGTGA	6 cut(s)	646, 830, 844, 961, 1032, 1237
AvaI	CYCGRG	1 cut(s)	862
AvaII	GGWCC	3 cut(s)	379, 1744, 1984
AvrII	CCTAGG	1 cut(s)	1807
AxyI	CCTNAGG	1 cut(s)	892
BaeGI	GKGCMC	2 cut(s)	102, 794
BalI	TGGCCA	1 cut(s)	1463
BamHI	GGATCC	1 cut(s)	921
BanI	GGYRCC	5 cut(s)	525, 596, 768, 1371, 1823
BanII	GRGCYC	4 cut(s)	794, 888, 1040, 1287
BarI	GAAGNNNNNNTAC	2 cut(s)	1409, 1441
BauI	CACGAG	1 cut(s)	1772
BbrPI	CACGTG	1 cut(s)	733
BbsI	GAAGAC	3 cut(s)	503, 1518, 1873
Bbv12I	GWGCWC	4 cut(s)	33, 741, 1287, 2018
BbvCI	CCTCAGC	1 cut(s)	689
BceAI	ACGGC	3 cut(s)	595, 696, 1716
BciT130I	CCWGG	3 cut(s)	36, 518, 1592
BcnI	CCSGG	3 cut(s)	456, 713, 1894
BcoDI	GTCTC	6 cut(s)	177, 659, 1665, 1801, 2078, 2101
BfaI	CTAG	6 cut(s)	411, 467, 948, 1073, 1113, 1808
BfmI	CTRYAG	1 cut(s)	909
BfoI	RGCGCY	3 cut(s)	287, 529, 600
BfuAI	ACCTGC	1 cut(s)	1683
BglII	AGATCT	1 cut(s)	407
BlnI	CCTAGG	1 cut(s)	1807
BlpI	GCTNAGC	1 cut(s)	915
BmcAI	AGTACT	2 cut(s)	223, 1943
Bme1390I	CCNGG	6 cut(s)	36, 456, 518, 713, 1592, 1894
Bme18I	GGWCC	3 cut(s)	379, 1744, 1984
BmeT110I	CYCGRG	1 cut(s)	862
BmgBI	CACGTC	1 cut(s)	1104
BmgT120I	GGNCC	9 cut(s)	379, 479, 790, 791, 955, 1055, 1069, 1744, 1984
BmrFI	CCNGG	6 cut(s)	36, 456, 518, 713, 1592, 1894
BmrI	ACTGGG	1 cut(s)	2129
BmsI	GCATC	5 cut(s)	246, 658, 840, 1005, 1593
BmuI	ACTGGG	1 cut(s)	2129
BpiI	GAAGAC	3 cut(s)	503, 1518, 1873
BplI	GAGNNNNNCTC	6 cut(s)	513, 545, 875, 907, 1219, 1251
BpmI	CTGGAG	2 cut(s)	973, 1703
Bpu10I	CCTNAGC	3 cut(s)	689, 707, 1436
Bpu1102I	GCTNAGC	1 cut(s)	915
BpuEI	CTTGAG	3 cut(s)	62, 1922, 1966
BpuMI	CCSGG	3 cut(s)	456, 713, 1894
BsaAI	YACGTR	2 cut(s)	91, 733
BsaHI	GRCGYC	3 cut(s)	55, 526, 597
BsaI	GGTCTC	3 cut(s)	1665, 1801, 2078
BsaWI	WCCGGW	1 cut(s)	1741
BsaXI	ACNNNNNCTCC	4 cut(s)	971, 1001, 1400, 1430
Bse118I	RCCGGY	1 cut(s)	1635
Bse1I	ACTGG	3 cut(s)	583, 1375, 2124
Bse21I	CCTNAGG	1 cut(s)	892
Bse3DI	GCAATG	1 cut(s)	174
BseBI	CCWGG	3 cut(s)	36, 518, 1592
BseGI	GGATG	6 cut(s)	886, 975, 1608, 1731, 1758, 2005
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	7 cut(s)	190, 419, 654, 680, 906, 929, 1554
BseNI	ACTGG	3 cut(s)	583, 1375, 2124
BseRI	GAGGAG	2 cut(s)	368, 1469
BseSI	GKGCMC	2 cut(s)	102, 794
BseYI	CCCAGC	1 cut(s)	754
BsgI	GTGCAG	1 cut(s)	746
Bsh1236I	CGCG	1 cut(s)	1191
BshFI	GGCC	8 cut(s)	481, 582, 792, 957, 1056, 1070, 1463, 1862
BshNI	GGYRCC	5 cut(s)	525, 596, 768, 1371, 1823
BsiHKAI	GWGCWC	4 cut(s)	33, 741, 1287, 2018
BsiHKCI	CYCGRG	1 cut(s)	862
BsiSI	CCGG	7 cut(s)	251, 455, 712, 772, 1636, 1742, 1893
BslFI	GGGAC	3 cut(s)	66, 728, 1750
BsmAI	GTCTC	6 cut(s)	177, 659, 1665, 1801, 2078, 2101
BsmFI	GGGAC	3 cut(s)	66, 728, 1750
BsnI	GGCC	8 cut(s)	481, 582, 792, 957, 1056, 1070, 1463, 1862
Bso31I	GGTCTC	3 cut(s)	1665, 1801, 2078
BsoBI	CYCGRG	1 cut(s)	862
Bsp120I	GGGCCC	1 cut(s)	790
Bsp1286I	GDGCHC	8 cut(s)	33, 102, 741, 794, 888, 1040, 1287, 2018
Bsp1407I	TGTACA	3 cut(s)	1358, 1566, 1782
Bsp143I	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
Bsp1720I	GCTNAGC	1 cut(s)	915
Bsp19I	CCATGG	1 cut(s)	2064
BspANI	GGCC	8 cut(s)	481, 582, 792, 957, 1056, 1070, 1463, 1862
BspCNI	CTCAG	7 cut(s)	189, 420, 655, 681, 905, 928, 1553
BspFNI	CGCG	1 cut(s)	1191
BspMI	ACCTGC	1 cut(s)	1683
BspPI	GGATC	3 cut(s)	916, 929, 1149
BspQI	GCTCTTC	1 cut(s)	1535
BspT107I	GGYRCC	5 cut(s)	525, 596, 768, 1371, 1823
BspTNI	GGTCTC	3 cut(s)	1665, 1801, 2078
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	1 cut(s)	1635
BsrGI	TGTACA	3 cut(s)	1358, 1566, 1782
BsrI	ACTGG	3 cut(s)	583, 1375, 2124
BssAI	RCCGGY	1 cut(s)	1635
BssMI	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
BssNAI	GTATAC	1 cut(s)	425
BssNI	GRCGYC	3 cut(s)	55, 526, 597
BssSI	CACGAG	1 cut(s)	1772
BssT1I	CCWWGG	3 cut(s)	1807, 2019, 2064
Bst1107I	GTATAC	1 cut(s)	425
Bst2BI	CACGAG	1 cut(s)	1772
Bst2UI	CCWGG	3 cut(s)	36, 518, 1592
Bst4CI	ACNGT	7 cut(s)	221, 658, 798, 1517, 1566, 1666, 1964
Bst6I	CTCTTC	2 cut(s)	821, 1535
BstACI	GRCGYC	3 cut(s)	55, 526, 597
BstAUI	TGTACA	3 cut(s)	1358, 1566, 1782
BstBAI	YACGTR	2 cut(s)	91, 733
BstC8I	GCNNGC	9 cut(s)	119, 261, 288, 309, 752, 945, 1689, 1848, 2052
BstDEI	CTNAG	9 cut(s)	176, 428, 663, 689, 707, 892, 915, 1436, 1540
BstDSI	CCRYGG	1 cut(s)	2064
BstEII	GGTNACC	1 cut(s)	2123
BstENI	CCTNNNNNAGG	1 cut(s)	1429
BstF5I	GGATG	6 cut(s)	886, 975, 1608, 1731, 1758, 2005
BstFNI	CGCG	1 cut(s)	1191
BstH2I	RGCGCY	3 cut(s)	287, 529, 600
BstHHI	GCGC	6 cut(s)	286, 528, 599, 1191, 1491, 2163
BstKTI	GATC	6 cut(s)	410, 570, 924, 1132, 1144, 1622
BstMAI	GTCTC	6 cut(s)	177, 659, 1665, 1801, 2078, 2101
BstMBI	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
BstNI	CCWGG	3 cut(s)	36, 518, 1592
BstNSI	RCATGY	3 cut(s)	1009, 1178, 1182
BstPI	GGTNACC	1 cut(s)	2123
BstSCI	CCNGG	6 cut(s)	34, 454, 516, 711, 1590, 1892
BstSFI	CTRYAG	1 cut(s)	909
BstSLI	GKGCMC	2 cut(s)	102, 794
BstSNI	TACGTA	1 cut(s)	91
BstUI	CGCG	1 cut(s)	1191
BstV2I	GAAGAC	3 cut(s)	503, 1518, 1873
BstX2I	RGATCY	3 cut(s)	407, 921, 1141
BstXI	CCANNNNNNTGG	2 cut(s)	1834, 1858
BstYI	RGATCY	3 cut(s)	407, 921, 1141
BstZ17I	GTATAC	1 cut(s)	425
Bsu36I	CCTNAGG	1 cut(s)	892
BsuRI	GGCC	8 cut(s)	481, 582, 792, 957, 1056, 1070, 1463, 1862
BtgI	CCRYGG	1 cut(s)	2064
BtgZI	GCGATG	2 cut(s)	98, 1873
BtrI	CACGTC	1 cut(s)	1104
BtsCI	GGATG	6 cut(s)	886, 975, 1608, 1731, 1758, 2005
BtsI	GCAGTG	2 cut(s)	1581, 1691
BtsIMutI	CAGTG	5 cut(s)	794, 1548, 1562, 1581, 1691
BveI	ACCTGC	1 cut(s)	1683
Cac8I	GCNNGC	9 cut(s)	119, 261, 288, 309, 752, 945, 1689, 1848, 2052
CfoI	GCGC	6 cut(s)	286, 528, 599, 1191, 1491, 2163
Cfr10I	RCCGGY	1 cut(s)	1635
Cfr13I	GGNCC	9 cut(s)	379, 479, 790, 791, 955, 1055, 1069, 1744, 1984
CseI	GACGC	1 cut(s)	63
CviAII	CATG	8 cut(s)	472, 556, 781, 1006, 1175, 1179, 1324, 2065
DdeI	CTNAG	9 cut(s)	176, 428, 663, 689, 707, 892, 915, 1436, 1540
DinI	GGCGCC	2 cut(s)	527, 598
DpnI	GATC	6 cut(s)	409, 569, 923, 1131, 1143, 1621
DpnII	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
DraI	TTTAAA	1 cut(s)	345
EaeI	YGGCCR	2 cut(s)	580, 1461
Eam1104I	CTCTTC	2 cut(s)	821, 1535
EarI	CTCTTC	2 cut(s)	821, 1535
Ecl136II	GAGCTC	1 cut(s)	1285
Eco105I	TACGTA	1 cut(s)	91
Eco130I	CCWWGG	3 cut(s)	1807, 2019, 2064
Eco24I	GRGCYC	4 cut(s)	794, 888, 1040, 1287
Eco31I	GGTCTC	3 cut(s)	1665, 1801, 2078
Eco32I	GATATC	1 cut(s)	810
Eco47I	GGWCC	3 cut(s)	379, 1744, 1984
Eco53kI	GAGCTC	1 cut(s)	1285
Eco57I	CTGAAG	1 cut(s)	1376
Eco72I	CACGTG	1 cut(s)	733
Eco81I	CCTNAGG	1 cut(s)	892
Eco88I	CYCGRG	1 cut(s)	862
Eco91I	GGTNACC	1 cut(s)	2123
EcoICRI	GAGCTC	1 cut(s)	1285
EcoNI	CCTNNNNNAGG	1 cut(s)	1429
EcoO109I	RGGNCCY	1 cut(s)	790
EcoO65I	GGTNACC	1 cut(s)	2123
EcoRII	CCWGG	3 cut(s)	34, 516, 1590
EcoRV	GATATC	1 cut(s)	810
EcoT14I	CCWWGG	3 cut(s)	1807, 2019, 2064
EcoT22I	ATGCAT	2 cut(s)	6, 1180
EcoT38I	GRGCYC	4 cut(s)	794, 888, 1040, 1287
EgeI	GGCGCC	2 cut(s)	527, 598
EheI	GGCGCC	2 cut(s)	527, 598
ErhI	CCWWGG	3 cut(s)	1807, 2019, 2064
FaeI	CATG	8 cut(s)	475, 559, 784, 1009, 1178, 1182, 1327, 2068
FalI	AAGNNNNNCTT	2 cut(s)	2012, 2044
FaqI	GGGAC	3 cut(s)	66, 728, 1750
FatI	CATG	8 cut(s)	471, 555, 780, 1005, 1174, 1178, 1323, 2064
FauI	CCCGC	3 cut(s)	295, 654, 2059
FblI	GTMKAC	1 cut(s)	424
FokI	GGATG	6 cut(s)	893, 962, 1615, 1738, 1745, 2012
FriOI	GRGCYC	4 cut(s)	794, 888, 1040, 1287
FspBI	CTAG	6 cut(s)	411, 467, 948, 1073, 1113, 1808
GlaI	GCGC	6 cut(s)	285, 527, 598, 1190, 1490, 2162
GsaI	CCCAGC	1 cut(s)	758
GsuI	CTGGAG	2 cut(s)	973, 1703
HaeII	RGCGCY	3 cut(s)	287, 529, 600
HaeIII	GGCC	8 cut(s)	481, 582, 792, 957, 1056, 1070, 1463, 1862
HapII	CCGG	7 cut(s)	251, 455, 712, 772, 1636, 1742, 1893
HgaI	GACGC	1 cut(s)	63
HhaI	GCGC	6 cut(s)	286, 528, 599, 1191, 1491, 2163
Hin1I	GRCGYC	3 cut(s)	55, 526, 597
Hin1II	CATG	8 cut(s)	475, 559, 784, 1009, 1178, 1182, 1327, 2068
Hin6I	GCGC	6 cut(s)	284, 526, 597, 1189, 1489, 2161
HinP1I	GCGC	6 cut(s)	284, 526, 597, 1189, 1489, 2161
HincII	GTYRAC	1 cut(s)	1306
HindII	GTYRAC	1 cut(s)	1306
HindIII	AAGCTT	2 cut(s)	309, 1970
HinfI	GANTC	9 cut(s)	618, 667, 763, 902, 1155, 1166, 1476, 1915, 2037
HpaII	CCGG	7 cut(s)	251, 455, 712, 772, 1636, 1742, 1893
HphI	GGTGA	6 cut(s)	646, 830, 844, 961, 1032, 1237
Hpy166II	GTNNAC	7 cut(s)	379, 425, 678, 1306, 1359, 1475, 1581
Hpy188I	TCNGA	5 cut(s)	540, 1033, 1395, 1833, 2042
Hpy188III	TCNNGA	6 cut(s)	411, 486, 845, 925, 1626, 2075
Hpy8I	GTNNAC	7 cut(s)	379, 425, 678, 1306, 1359, 1475, 1581
Hpy99I	CGWCG	2 cut(s)	612, 638
HpyAV	CCTTC	7 cut(s)	112, 236, 1407, 1435, 1593, 1933, 2141
HpyCH4III	ACNGT	7 cut(s)	221, 658, 798, 1517, 1566, 1666, 1964
HpyCH4IV	ACGT	7 cut(s)	90, 326, 636, 732, 741, 1103, 1788
HpyCH4V	TGCA	9 cut(s)	4, 167, 727, 1178, 1268, 1343, 1574, 1658, 2147
HpyF3I	CTNAG	9 cut(s)	176, 428, 663, 689, 707, 892, 915, 1436, 1540
HpySE526I	ACGT	7 cut(s)	90, 326, 636, 732, 741, 1103, 1788
Hsp92I	GRCGYC	3 cut(s)	55, 526, 597
Hsp92II	CATG	8 cut(s)	475, 559, 784, 1009, 1178, 1182, 1327, 2068
HspAI	GCGC	6 cut(s)	284, 526, 597, 1189, 1489, 2161
KasI	GGCGCC	2 cut(s)	525, 596
Kzo9I	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
LguI	GCTCTTC	1 cut(s)	1535
LmnI	GCTCC	7 cut(s)	36, 736, 774, 1213, 1408, 1684, 2021
LweI	GCATC	5 cut(s)	246, 658, 840, 1005, 1593
MaeI	CTAG	6 cut(s)	411, 467, 948, 1073, 1113, 1808
MaeII	ACGT	7 cut(s)	90, 326, 636, 732, 741, 1103, 1788
MaeIII	GTNAC	7 cut(s)	658, 967, 1867, 1898, 1964, 2115, 2123
MalI	GATC	6 cut(s)	409, 569, 923, 1131, 1143, 1621
MboI	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
MboII	GAAGA	9 cut(s)	508, 835, 838, 1522, 1523, 1525, 1528, 1873, 1967
MflI	RGATCY	3 cut(s)	407, 921, 1141
MhlI	GDGCHC	8 cut(s)	33, 102, 741, 794, 888, 1040, 1287, 2018
MlsI	TGGCCA	1 cut(s)	1463
MluCI	AATT	3 cut(s)	127, 301, 1318
MluNI	TGGCCA	1 cut(s)	1463
Mly113I	GGCGCC	2 cut(s)	526, 597
MlyI	GAGTC	5 cut(s)	661, 757, 896, 1470, 2046
MmeI	TCCRAC	3 cut(s)	879, 1648, 2020
Mox20I	TGGCCA	1 cut(s)	1463
Mph1103I	ATGCAT	2 cut(s)	6, 1180
MscI	TGGCCA	1 cut(s)	1463
MseI	TTAA	8 cut(s)	63, 300, 344, 858, 1119, 1403, 1737, 2111
MslI	CAYNNNNRTG	3 cut(s)	683, 1179, 1832
Msp20I	TGGCCA	1 cut(s)	1463
MspA1I	CMGCKG	2 cut(s)	919, 1681
MspI	CCGG	7 cut(s)	251, 455, 712, 772, 1636, 1742, 1893
MspR9I	CCNGG	6 cut(s)	36, 456, 518, 713, 1592, 1894
MvaI	CCWGG	3 cut(s)	36, 518, 1592
MvnI	CGCG	1 cut(s)	1191
NarI	GGCGCC	2 cut(s)	526, 597
NciI	CCSGG	3 cut(s)	456, 713, 1894
NcoI	CCATGG	1 cut(s)	2064
NdeII	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
NlaIII	CATG	8 cut(s)	475, 559, 784, 1009, 1178, 1182, 1327, 2068
NmeAIII	GCCGAG	1 cut(s)	2060
NmuCI	GTSAC	2 cut(s)	658, 967
NsiI	ATGCAT	2 cut(s)	6, 1180
NspI	RCATGY	3 cut(s)	1009, 1178, 1182
PasI	CCCWGGG	1 cut(s)	517
PciI	ACATGT	1 cut(s)	1005
PciSI	GCTCTTC	1 cut(s)	1535
PcsI	WCGNNNNNNNCGW	2 cut(s)	738, 747
PfeI	GAWTC	4 cut(s)	618, 1155, 1166, 1915
PfoI	TCCNGGA	1 cut(s)	454
PleI	GAGTC	5 cut(s)	661, 757, 896, 1470, 2045
PluTI	GGCGCC	2 cut(s)	529, 600
PmaCI	CACGTG	1 cut(s)	733
PmlI	CACGTG	1 cut(s)	733
PpsI	GAGTC	5 cut(s)	661, 757, 896, 1470, 2045
Ppu21I	YACGTR	2 cut(s)	91, 733
PscI	ACATGT	1 cut(s)	1005
Psp124BI	GAGCTC	1 cut(s)	1287
Psp6I	CCWGG	3 cut(s)	34, 516, 1590
PspCI	CACGTG	1 cut(s)	733
PspEI	GGTNACC	1 cut(s)	2123
PspFI	CCCAGC	1 cut(s)	754
PspGI	CCWGG	3 cut(s)	34, 516, 1590
PspOMI	GGGCCC	1 cut(s)	790
PspPI	GGNCC	9 cut(s)	379, 479, 790, 791, 955, 1055, 1069, 1744, 1984
PsuI	RGATCY	3 cut(s)	407, 921, 1141
RseI	CAYNNNNRTG	3 cut(s)	683, 1179, 1832
SacI	GAGCTC	1 cut(s)	1287
SapI	GCTCTTC	1 cut(s)	1535
SaqAI	TTAA	8 cut(s)	63, 300, 344, 858, 1119, 1403, 1737, 2111
Sau3AI	GATC	6 cut(s)	407, 567, 921, 1129, 1141, 1619
Sau96I	GGNCC	9 cut(s)	379, 479, 790, 791, 955, 1055, 1069, 1744, 1984
ScaI	AGTACT	2 cut(s)	223, 1943
SchI	GAGTC	5 cut(s)	661, 757, 896, 1470, 2046
ScrFI	CCNGG	6 cut(s)	36, 456, 518, 713, 1592, 1894
SduI	GDGCHC	8 cut(s)	33, 102, 741, 794, 888, 1040, 1287, 2018
SfaNI	GCATC	5 cut(s)	246, 658, 840, 1005, 1593
SfcI	CTRYAG	1 cut(s)	909
SfoI	GGCGCC	2 cut(s)	527, 598
SinI	GGWCC	3 cut(s)	379, 1744, 1984
SmiMI	CAYNNNNRTG	3 cut(s)	683, 1179, 1832
SmlI	CTYRAG	4 cut(s)	77, 1937, 1945, 2164
SmoI	CTYRAG	4 cut(s)	77, 1937, 1945, 2164
SnaBI	TACGTA	1 cut(s)	91
Sse9I	AATT	3 cut(s)	127, 301, 1318
SspDI	GGCGCC	2 cut(s)	525, 596
SspI	AATATT	1 cut(s)	1352
SspMI	CTAG	6 cut(s)	411, 467, 948, 1073, 1113, 1808
SstI	GAGCTC	1 cut(s)	1287
StyD4I	CCNGG	6 cut(s)	34, 454, 516, 711, 1590, 1892
StyI	CCWWGG	3 cut(s)	1807, 2019, 2064
TaaI	ACNGT	7 cut(s)	221, 658, 798, 1517, 1566, 1666, 1964
TaiI	ACGT	7 cut(s)	93, 329, 639, 735, 744, 1106, 1791
TaqI	TCGA	5 cut(s)	9, 133, 2076, 2091, 2155
TasI	AATT	3 cut(s)	127, 301, 1318
TatI	WGTACW	5 cut(s)	221, 1358, 1566, 1782, 1941
TauI	GCSGC	5 cut(s)	213, 597, 996, 1070, 1681
TfiI	GAWTC	4 cut(s)	618, 1155, 1166, 1915
Tru1I	TTAA	8 cut(s)	63, 300, 344, 858, 1119, 1403, 1737, 2111
Tru9I	TTAA	8 cut(s)	63, 300, 344, 858, 1119, 1403, 1737, 2111
TscAI	CASTG	5 cut(s)	801, 1548, 1569, 1581, 1698
TseFI	GTSAC	2 cut(s)	658, 967
Tsp45I	GTSAC	2 cut(s)	658, 967
TspDTI	ATGAA	5 cut(s)	544, 1340, 1632, 1747, 1915
TspGWI	ACGGA	2 cut(s)	1167, 1220
TspRI	CASTG	5 cut(s)	801, 1548, 1569, 1581, 1698
VpaK11BI	GGWCC	3 cut(s)	379, 1744, 1984
XagI	CCTNNNNNAGG	1 cut(s)	1429
XbaI	TCTAGA	1 cut(s)	410
XceI	RCATGY	3 cut(s)	1009, 1178, 1182
XcmI	CCANNNNNNNNNTGG	2 cut(s)	895, 2062
XmaJI	CCTAGG	1 cut(s)	1807
XmiI	GTMKAC	1 cut(s)	424
XspI	CTAG	6 cut(s)	411, 467, 948, 1073, 1113, 1808
ZrmI	AGTACT	2 cut(s)	223, 1943
Zsp2I	ATGCAT	2 cut(s)	6, 1180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.