Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0011171

Physical Location & Seq

Genomic Coordinates Forward (+)

5820296 .. 5822884

Gene Structure 2589 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010982

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGAAGGTCTGCCGCAGGCGGAGGTGTCTGAAATCCACAACAACAACAAGGCGGCCGTCCTTGCCTACCCCGCCGGGGCTGCACAAGTTAATGCACAGTCTTTCCTACAACTCGCCATGTACCCTATTACTCTAAAGTTTGAGGAGGTGTTTTACAAAGTGAAAATGGACCACAACGCTGGATTAGTACCGTGGCCGAGTAGTAGTAACAGGTCATCGTCTGAGAAAAGCATACTGAACGGAATATCAGGTGTGGTTTGCCCCGGAGAGATACTAGCCATGCTAGGTCCCTCCGGTAGTGGCAAAACAACTCTTCTCACAGCTCTCGGCGGCCGCCTCCACGGCAAGCTCTCCGGCAAAATCACCTACAACTCCCAGCCATTCTGCGGCGCCATCAAACGGAGAACCGGATTCGTCGCACAGGAGGACGTACTGTACCCTCACCTCACCGTAACCGAGACTCTCGTCTTCACCGCCCTGCTGCGGCTGCCCAACACCCTGACACGCGACGAGAAAGTGCAGCACGTAGAGCAAGTGATCAGCGAGCTCGGGCTGACCCGGTGCCGGAGCAGCATGATCGGGGGCCCCCTGTTTAGGGGAATATCTGGTGGAGAGAAGAAGAGGGTTAGTATTGGACAAGAGATGCTGATTAATCCAAGCTTGCTTTTGCTGGACGAGCCCACCTCGGGTTTGGACTCCACTACGGCTCAAAGAATTCTGACCACGGTGAAGAGGCTTGCAGGTGGGGGTCGGACCGTCGTCACCACAATCCATCAGCCCTCGAGCCGCCTCTACCACATGTTTGATAAACTGGTCTTGCTTTCCGAGGGCTACCCCATTTACTATGGCCCTGCTTCTGCTGCCCTCGAGTATTTTTCCTCTATTGGTTTCTCCACGTCCTTGCCTTATGTCAATCCAGCTGATCTCTTGCTCGATCTCGCTAACGGAATCGCCCCTGATTCGAAACCTGCCTCCGATCATCAACAACGTGAGAACATGGAACAGGATCAAAAGATGGTGAGAAAAGATCTCGTTTCTGCCTACGACAAAAACATTTACACAAGATTGAAAGCTGAGCTCTGTGGTGGTGGTTTGGAGGTCAACAATGTCTTCAATAATTACGTCAAAGAAGCTGCTTCTTCAAGACACGATCAACATCATGAACATTTTTGGTGTACAAGCTGGTGGCACCAGTTCAAGGTACTACTCCAGAGGGGACTAAGGGAACGAAGGTACGAAGCATTCAACAGGCTAAGAATTTTCCAAGTCCTAAGCGTCGCCACGCTCGGTGGACTCCTCTGGTGGCACACCCCTTCTTCCCATATCGAAGATCGAATTGCCTTGCTCTTCTTCTTCTCCGTCTTCTGGGGATTCTACCCCCTCTACAATGCAGTCTTTACATTCCCCCAAGAAAGAAGAATGCTAATAAAAGAAAGATCTTCCGGAATGTACCGCCTCTCGTCATATTTTCTGGCCAGAACAGTGGGTGATCTACCACTCGAGCTTGCACTCCCCACCGCATTTGTGCTGATAATCTACTGGATGGGTGGACTCAAACCCGACCCGTTCACCTTCATCCTTTCTCTTCTCGTTGTTCTCTACAACGTCCTCGTCTCCCAGAGCCTCGGGTTGGCTATCGGCGCCATTCTCATGGACATAAAGCAAGCCACCACTTTGGCTTCGGTTACGACACTTGTTTTCCTCATCGCCGGAGGCTACTACATTCAACAGATTCCTCCGTTCATAGTGTGGCTAAAGTACTTGAGCTATAGTTTCTACTGCTACAAGCTTCTTCTCGGGGTTCAATACCGGGAAGACGATTACTACGAGTGCTCGAAAGGTGTCTTGTGCCGAGTTGGAGACTTGCCTGCCGTCAAGTCAATGGGAGATCTTAACAACTTGTGGATAGAGGTCTCCATTCTCGCCCTGATGTTACTAGGTTACCGACTTATTGCTTATCTCGCTTTGCATCGAGTTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009965 GO:0010016 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071944 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

661

Amino Acids

73.89

Weight (kDa)

8.9

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	79 - 229	4.4e-26	ABC transporter
ABC2_membrane_7	PF19055	258 - 656	1.1e-11	ABC-2 type transporter
ABC2_membrane	PF01061	397 - 603	2.3e-43	ABC-2 type transporter
ABC2_membrane_3	PF12698	448 - 654	6e-10	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31770
fragaria_vesca	FvH4_2g37300 FvH4_2g37300 FvH4_2g37300 FvH4_2g37300
malus_domestica	MD08G1001300.v1.1 MD15G1000600.v1.1
prunus_persica	Prupe.1G353300_v2.0.a1
pyrus_communis	pycom08g00070
rosa_chinensis	RchiOBHm_Chr6g0304401
rosa_laevigata	RLG00000010982
rosa_multiflora	Rmu_ssc0000218.1_g000046
rosa_roxburghii	Rroxscaffold_7G00163770
rosa_rugosa	Rorug06G0331100 Rorug06G0331200
rosa_samantha	Rh6AG444100 Rh6BG458300 Rh6CG456900 Rh6DG443600
rosa_wichuraiana	Rw6G038550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	731
Acc36I	ACCTGC	2 cut(s)	731, 976
AccB1I	GGYRCC	4 cut(s)	389, 561, 1188, 1640
AccII	CGCG	1 cut(s)	507
AccIII	TCCGGA	1 cut(s)	1442
AclWI	GGATC	1 cut(s)	1014
AcoI	YGGCCR	4 cut(s)	54, 194, 331, 1473
AcsI	RAATTY	2 cut(s)	714, 1257
AcyI	GRCGYC	2 cut(s)	390, 1641
AfaI	GTAC	9 cut(s)	122, 189, 432, 437, 1177, 1203, 1235, 1451, 1760
AflIII	ACRYGT	1 cut(s)	798
AgsI	TTSAA	7 cut(s)	1069, 1114, 1143, 1198, 1246, 1727, 1805
AjiI	CACGTC	1 cut(s)	897
Alw21I	GWGCWC	3 cut(s)	549, 1080, 1835
Alw26I	GTCTC	4 cut(s)	452, 1618, 1854, 1918
AlwI	GGATC	1 cut(s)	1014
Ama87I	CYCGRG	7 cut(s)	548, 685, 781, 866, 1499, 1625, 1796
Aor13HI	TCCGGA	1 cut(s)	1442
AoxI	GGCC	6 cut(s)	54, 194, 331, 583, 847, 1473
ApaI	GGGCCC	1 cut(s)	587
ApeKI	GCWGC	7 cut(s)	80, 481, 487, 520, 570, 860, 1133
ApoI	RAATTY	2 cut(s)	714, 1257
AseI	ATTAAT	1 cut(s)	651
AspLEI	GCGC	2 cut(s)	392, 1643
AspS9I	GGNCC	6 cut(s)	169, 287, 583, 584, 753, 848
AsuC2I	CCSGG	4 cut(s)	76, 264, 559, 1811
AsuHPI	GGTGA	9 cut(s)	355, 434, 439, 463, 739, 754, 1030, 1499, 1561
AsuII	TTCGAA	1 cut(s)	962
AvaI	CYCGRG	7 cut(s)	548, 685, 781, 866, 1499, 1625, 1796
AvaII	GGWCC	3 cut(s)	169, 287, 753
BaeGI	GKGCMC	1 cut(s)	587
BalI	TGGCCA	1 cut(s)	1475
BanI	GGYRCC	4 cut(s)	389, 561, 1188, 1640
BanII	GRGCYC	4 cut(s)	549, 587, 681, 1080
BbsI	GAAGAC	4 cut(s)	460, 1102, 1354, 1821
Bbv12I	GWGCWC	3 cut(s)	549, 1080, 1835
BbvI	GCAGC	7 cut(s)	67, 468, 474, 532, 582, 847, 1120
BccI	CCATC	4 cut(s)	401, 780, 1009, 1537
BceAI	ACGGC	4 cut(s)	41, 358, 720, 1856
BcgI	CGANNNNNNTGC	3 cut(s)	559, 593, 1958
BclI	TGATCA	1 cut(s)	537
BcnI	CCSGG	4 cut(s)	76, 264, 559, 1811
BcoDI	GTCTC	4 cut(s)	452, 1618, 1854, 1918
BfaI	CTAG	4 cut(s)	275, 284, 1937, 1981
BfmI	CTRYAG	1 cut(s)	1768
BfoI	RGCGCY	2 cut(s)	393, 1644
BfuAI	ACCTGC	2 cut(s)	731, 976
BglI	GCCNNNNNGGC	1 cut(s)	342
BglII	AGATCT	3 cut(s)	1027, 1436, 1888
BlpI	GCTNAGC	1 cut(s)	1074
BmcAI	AGTACT	1 cut(s)	1760
Bme1390I	CCNGG	4 cut(s)	76, 264, 559, 1811
Bme18I	GGWCC	3 cut(s)	169, 287, 753
BmeT110I	CYCGRG	7 cut(s)	548, 685, 781, 866, 1499, 1625, 1796
BmgBI	CACGTC	1 cut(s)	897
BmgT120I	GGNCC	6 cut(s)	169, 287, 583, 584, 753, 848
BmiI	GGNNCC	8 cut(s)	289, 391, 563, 584, 585, 586, 1190, 1642
BmrFI	CCNGG	4 cut(s)	76, 264, 559, 1811
BmsI	GCATC	2 cut(s)	633, 1978
BoxI	GACNNNNGTC	2 cut(s)	464, 758
BpiI	GAAGAC	4 cut(s)	460, 1102, 1354, 1821
BplI	GAGNNNNNCTC	2 cut(s)	668, 700
BpmI	CTGGAG	1 cut(s)	1193
Bpu10I	CCTNAGC	1 cut(s)	1271
Bpu1102I	GCTNAGC	1 cut(s)	1074
Bpu14I	TTCGAA	1 cut(s)	962
BpuEI	CTTGAG	1 cut(s)	1783
BpuMI	CCSGG	4 cut(s)	76, 264, 559, 1811
BsaAI	YACGTR	1 cut(s)	526
BsaBI	GATNNNNATC	1 cut(s)	1155
BsaHI	GRCGYC	2 cut(s)	390, 1641
BsaI	GGTCTC	1 cut(s)	1918
BsaJI	CCNNGG	8 cut(s)	75, 191, 262, 340, 684, 723, 825, 1624
BsaWI	WCCGGW	3 cut(s)	293, 407, 1442
Bse1I	ACTGG	3 cut(s)	816, 1192, 1544
Bse8I	GATNNNNATC	1 cut(s)	1155
BseAI	TCCGGA	1 cut(s)	1442
BseDI	CCNNGG	8 cut(s)	75, 191, 262, 340, 684, 723, 825, 1624
BseGI	GGATG	2 cut(s)	1548, 1575
BseJI	GATNNNNATC	1 cut(s)	1155
BseMII	CTCAG	2 cut(s)	213, 1065
BseNI	ACTGG	3 cut(s)	816, 1192, 1544
BseRI	GAGGAG	2 cut(s)	158, 1286
BseSI	GKGCMC	1 cut(s)	587
BseX3I	CGGCCG	2 cut(s)	54, 331
BseXI	GCAGC	7 cut(s)	67, 468, 474, 532, 582, 847, 1120
BseYI	CCCAGC	1 cut(s)	375
BsgI	GTGCAG	2 cut(s)	66, 539
Bsh1236I	CGCG	1 cut(s)	507
Bsh1285I	CGRYCG	2 cut(s)	57, 334
BshFI	GGCC	6 cut(s)	56, 196, 333, 585, 849, 1475
BshNI	GGYRCC	4 cut(s)	389, 561, 1188, 1640
BsiEI	CGRYCG	2 cut(s)	57, 334
BsiHKAI	GWGCWC	3 cut(s)	549, 1080, 1835
BsiHKCI	CYCGRG	7 cut(s)	548, 685, 781, 866, 1499, 1625, 1796
BslFI	GGGAC	2 cut(s)	273, 1230
BsmAI	GTCTC	4 cut(s)	452, 1618, 1854, 1918
BsmBI	CGTCTC	1 cut(s)	1618
BsmFI	GGGAC	2 cut(s)	273, 1230
BsmI	GAATGC	2 cut(s)	1241, 1425
BsnI	GGCC	6 cut(s)	56, 196, 333, 585, 849, 1475
Bso31I	GGTCTC	1 cut(s)	1918
BsoBI	CYCGRG	7 cut(s)	548, 685, 781, 866, 1499, 1625, 1796
Bsp119I	TTCGAA	1 cut(s)	962
Bsp120I	GGGCCC	1 cut(s)	583
Bsp1286I	GDGCHC	5 cut(s)	549, 587, 681, 1080, 1835
Bsp13I	TCCGGA	1 cut(s)	1442
Bsp1407I	TGTACA	1 cut(s)	1175
Bsp1720I	GCTNAGC	1 cut(s)	1074
BspANI	GGCC	6 cut(s)	56, 196, 333, 585, 849, 1475
BspCNI	CTCAG	2 cut(s)	214, 1066
BspEI	TCCGGA	1 cut(s)	1442
BspFNI	CGCG	1 cut(s)	507
BspHI	TCATGA	1 cut(s)	1159
BspLI	GGNNCC	8 cut(s)	289, 391, 563, 584, 585, 586, 1190, 1642
BspMI	ACCTGC	2 cut(s)	731, 976
BspPI	GGATC	1 cut(s)	1014
BspQI	GCTCTTC	1 cut(s)	1352
BspT104I	TTCGAA	1 cut(s)	962
BspT107I	GGYRCC	4 cut(s)	389, 561, 1188, 1640
BspTNI	GGTCTC	1 cut(s)	1918
BsrGI	TGTACA	1 cut(s)	1175
BsrI	ACTGG	3 cut(s)	816, 1192, 1544
BssECI	CCNNGG	8 cut(s)	75, 191, 262, 340, 684, 723, 825, 1624
BssNI	GRCGYC	2 cut(s)	390, 1641
Bst4CI	ACNGT	7 cut(s)	99, 192, 435, 451, 727, 757, 1483
Bst6I	CTCTTC	5 cut(s)	318, 614, 725, 1352, 1590
BstACI	GRCGYC	2 cut(s)	390, 1641
BstAUI	TGTACA	1 cut(s)	1175
BstBAI	YACGTR	1 cut(s)	526
BstBI	TTCGAA	1 cut(s)	962
BstC8I	GCNNGC	8 cut(s)	18, 347, 545, 662, 738, 1506, 1665, 1869
BstDEI	CTNAG	5 cut(s)	222, 1074, 1220, 1253, 1271
BstDSI	CCRYGG	3 cut(s)	191, 340, 723
BstEII	GGTNACC	1 cut(s)	1940
BstF5I	GGATG	2 cut(s)	1548, 1575
BstFNI	CGCG	1 cut(s)	507
BstH2I	RGCGCY	2 cut(s)	393, 1644
BstHHI	GCGC	2 cut(s)	392, 1643
BstMAI	GTCTC	4 cut(s)	452, 1618, 1854, 1918
BstMCI	CGRYCG	2 cut(s)	57, 334
BstNSI	RCATGY	1 cut(s)	802
BstPAI	GACNNNNGTC	2 cut(s)	464, 758
BstPI	GGTNACC	1 cut(s)	1940
BstSCI	CCNGG	4 cut(s)	74, 262, 557, 1809
BstSFI	CTRYAG	1 cut(s)	1768
BstSLI	GKGCMC	1 cut(s)	587
BstUI	CGCG	1 cut(s)	507
BstV1I	GCAGC	7 cut(s)	67, 468, 474, 532, 582, 847, 1120
BstV2I	GAAGAC	4 cut(s)	460, 1102, 1354, 1821
BstX2I	RGATCY	3 cut(s)	1027, 1436, 1888
BstXI	CCANNNNNNTGG	4 cut(s)	179, 1483, 1651, 1675
BstYI	RGATCY	3 cut(s)	1027, 1436, 1888
BstZI	CGGCCG	2 cut(s)	54, 331
BsuRI	GGCC	6 cut(s)	56, 196, 333, 585, 849, 1475
BtgI	CCRYGG	3 cut(s)	191, 340, 723
BtgZI	GCGATG	1 cut(s)	1690
BtrI	CACGTC	1 cut(s)	897
BtsCI	GGATG	2 cut(s)	1548, 1575
BtsIMutI	CAGTG	1 cut(s)	1488
BveI	ACCTGC	2 cut(s)	731, 976
Cac8I	GCNNGC	8 cut(s)	18, 347, 545, 662, 738, 1506, 1665, 1869
CciI	TCATGA	1 cut(s)	1159
CciNI	GCGGCCGC	1 cut(s)	331
CfoI	GCGC	2 cut(s)	392, 1643
Cfr13I	GGNCC	6 cut(s)	169, 287, 583, 584, 753, 848
CpoI	CGGWCCG	1 cut(s)	753
CseI	GACGC	1 cut(s)	1264
Csp6I	GTAC	9 cut(s)	121, 188, 431, 436, 1176, 1202, 1234, 1450, 1759
CspCI	CAANNNNNGTGG	2 cut(s)	1504, 1539
CspI	CGGWCCG	1 cut(s)	753
CviAII	CATG	7 cut(s)	118, 280, 574, 799, 997, 1160, 1651
CviQI	GTAC	9 cut(s)	121, 188, 431, 436, 1176, 1202, 1234, 1450, 1759
DdeI	CTNAG	5 cut(s)	222, 1074, 1220, 1253, 1271
DinI	GGCGCC	2 cut(s)	391, 1642
EaeI	YGGCCR	4 cut(s)	54, 194, 331, 1473
EagI	CGGCCG	2 cut(s)	54, 331
Eam1104I	CTCTTC	5 cut(s)	318, 614, 725, 1352, 1590
EarI	CTCTTC	5 cut(s)	318, 614, 725, 1352, 1590
EciI	GGCGGA	1 cut(s)	35
Ecl136II	GAGCTC	2 cut(s)	547, 1078
EclXI	CGGCCG	2 cut(s)	54, 331
Eco24I	GRGCYC	4 cut(s)	549, 587, 681, 1080
Eco31I	GGTCTC	1 cut(s)	1918
Eco47I	GGWCC	3 cut(s)	169, 287, 753
Eco52I	CGGCCG	2 cut(s)	54, 331
Eco53kI	GAGCTC	2 cut(s)	547, 1078
Eco88I	CYCGRG	7 cut(s)	548, 685, 781, 866, 1499, 1625, 1796
Eco91I	GGTNACC	1 cut(s)	1940
EcoICRI	GAGCTC	2 cut(s)	547, 1078
EcoO109I	RGGNCCY	3 cut(s)	287, 583, 584
EcoO65I	GGTNACC	1 cut(s)	1940
EcoRI	GAATTC	1 cut(s)	714
EcoT38I	GRGCYC	4 cut(s)	549, 587, 681, 1080
EgeI	GGCGCC	2 cut(s)	391, 1642
EheI	GGCGCC	2 cut(s)	391, 1642
Esp3I	CGTCTC	1 cut(s)	1618
FaeI	CATG	7 cut(s)	121, 283, 577, 802, 1000, 1163, 1654
FaqI	GGGAC	2 cut(s)	273, 1230
FatI	CATG	7 cut(s)	117, 279, 573, 798, 996, 1159, 1650
FauI	CCCGC	1 cut(s)	79
FbaI	TGATCA	1 cut(s)	537
FokI	GGATG	2 cut(s)	1555, 1562
FriOI	GRGCYC	4 cut(s)	549, 587, 681, 1080
FspBI	CTAG	4 cut(s)	275, 284, 1937, 1981
GlaI	GCGC	2 cut(s)	391, 1642
GsaI	CCCAGC	1 cut(s)	379
GsuI	CTGGAG	1 cut(s)	1193
HaeII	RGCGCY	2 cut(s)	393, 1644
HaeIII	GGCC	6 cut(s)	56, 196, 333, 585, 849, 1475
HgaI	GACGC	1 cut(s)	1264
HhaI	GCGC	2 cut(s)	392, 1643
Hin1I	GRCGYC	2 cut(s)	390, 1641
Hin1II	CATG	7 cut(s)	121, 283, 577, 802, 1000, 1163, 1654
Hin6I	GCGC	2 cut(s)	390, 1641
HinP1I	GCGC	2 cut(s)	390, 1641
HincII	GTYRAC	1 cut(s)	1102
HindII	GTYRAC	1 cut(s)	1102
HindIII	AAGCTT	2 cut(s)	658, 1787
HinfI	GANTC	9 cut(s)	411, 460, 695, 948, 959, 1293, 1371, 1551, 1732
HphI	GGTGA	9 cut(s)	355, 434, 439, 463, 739, 754, 1030, 1499, 1561
Hpy166II	GTNNAC	5 cut(s)	1102, 1176, 1292, 1550, 1569
Hpy188I	TCNGA	6 cut(s)	31, 223, 720, 753, 826, 976
Hpy188III	TCNNGA	4 cut(s)	1143, 1160, 1210, 1443
Hpy8I	GTNNAC	5 cut(s)	1102, 1176, 1292, 1550, 1569
Hpy99I	CGWCG	4 cut(s)	419, 512, 761, 1280
HpyAV	CCTTC	3 cut(s)	1224, 1323, 1582
HpyCH4III	ACNGT	7 cut(s)	99, 192, 435, 451, 727, 757, 1483
HpyCH4IV	ACGT	6 cut(s)	429, 525, 896, 988, 1122, 1605
HpyCH4V	TGCA	7 cut(s)	83, 95, 520, 740, 1391, 1508, 1969
HpyF3I	CTNAG	5 cut(s)	222, 1074, 1220, 1253, 1271
HpySE526I	ACGT	6 cut(s)	429, 525, 896, 988, 1122, 1605
Hsp92I	GRCGYC	2 cut(s)	390, 1641
Hsp92II	CATG	7 cut(s)	121, 283, 577, 802, 1000, 1163, 1654
HspAI	GCGC	2 cut(s)	390, 1641
KasI	GGCGCC	2 cut(s)	389, 1640
Kpn2I	TCCGGA	1 cut(s)	1442
Ksp22I	TGATCA	1 cut(s)	537
LguI	GCTCTTC	1 cut(s)	1352
LmnI	GCTCC	1 cut(s)	567
Lsp1109I	GCAGC	7 cut(s)	67, 468, 474, 532, 582, 847, 1120
LweI	GCATC	2 cut(s)	633, 1978
MaeI	CTAG	4 cut(s)	275, 284, 1937, 1981
MaeII	ACGT	6 cut(s)	429, 525, 896, 988, 1122, 1605
MaeIII	GTNAC	6 cut(s)	206, 451, 760, 1684, 1932, 1940
MflI	RGATCY	3 cut(s)	1027, 1436, 1888
MhlI	GDGCHC	5 cut(s)	549, 587, 681, 1080, 1835
MlsI	TGGCCA	1 cut(s)	1475
MluCI	AATT	4 cut(s)	714, 1117, 1257, 1335
MluNI	TGGCCA	1 cut(s)	1475
Mly113I	GGCGCC	2 cut(s)	390, 1641
MlyI	GAGTC	4 cut(s)	454, 689, 1287, 1545
MmeI	TCCRAC	2 cut(s)	731, 1837
Mox20I	TGGCCA	1 cut(s)	1475
MroI	TCCGGA	1 cut(s)	1442
MscI	TGGCCA	1 cut(s)	1475
MseI	TTAA	3 cut(s)	90, 651, 1893
MslI	CAYNNNNRTG	1 cut(s)	1649
Msp20I	TGGCCA	1 cut(s)	1475
MspA1I	CMGCKG	1 cut(s)	920
MspR9I	CCNGG	4 cut(s)	76, 264, 559, 1811
Mva1269I	GAATGC	2 cut(s)	1241, 1425
MvnI	CGCG	1 cut(s)	507
NarI	GGCGCC	2 cut(s)	390, 1641
NciI	CCSGG	4 cut(s)	76, 264, 559, 1811
NlaIII	CATG	7 cut(s)	121, 283, 577, 802, 1000, 1163, 1654
NlaIV	GGNNCC	8 cut(s)	289, 391, 563, 584, 585, 586, 1190, 1642
NmeAIII	GCCGAG	3 cut(s)	222, 306, 1877
NmuCI	GTSAC	1 cut(s)	760
NotI	GCGGCCGC	1 cut(s)	331
NspI	RCATGY	1 cut(s)	802
NspV	TTCGAA	1 cut(s)	962
PaeR7I	CTCGAG	3 cut(s)	781, 866, 1499
PagI	TCATGA	1 cut(s)	1159
PaqCI	CACCTGC	1 cut(s)	731
PciI	ACATGT	1 cut(s)	798
PciSI	GCTCTTC	1 cut(s)	1352
PcsI	WCGNNNNNNNCGW	1 cut(s)	1824
PctI	GAATGC	2 cut(s)	1241, 1425
PfeI	GAWTC	5 cut(s)	411, 948, 959, 1371, 1732
PleI	GAGTC	4 cut(s)	454, 689, 1287, 1545
PluTI	GGCGCC	2 cut(s)	393, 1644
PpsI	GAGTC	4 cut(s)	454, 689, 1287, 1545
Ppu21I	YACGTR	1 cut(s)	526
PpuMI	RGGWCCY	1 cut(s)	287
PscI	ACATGT	1 cut(s)	798
PshAI	GACNNNNGTC	2 cut(s)	464, 758
PshBI	ATTAAT	1 cut(s)	651
Psp124BI	GAGCTC	2 cut(s)	549, 1080
Psp5II	RGGWCCY	1 cut(s)	287
PspEI	GGTNACC	1 cut(s)	1940
PspFI	CCCAGC	1 cut(s)	375
PspN4I	GGNNCC	8 cut(s)	289, 391, 563, 584, 585, 586, 1190, 1642
PspOMI	GGGCCC	1 cut(s)	583
PspPI	GGNCC	6 cut(s)	169, 287, 583, 584, 753, 848
PspPPI	RGGWCCY	1 cut(s)	287
PspXI	VCTCGAGB	3 cut(s)	781, 866, 1499
PsuI	RGATCY	3 cut(s)	1027, 1436, 1888
PvuII	CAGCTG	1 cut(s)	920
RsaI	GTAC	9 cut(s)	122, 189, 432, 437, 1177, 1203, 1235, 1451, 1760
RsaNI	GTAC	9 cut(s)	121, 188, 431, 436, 1176, 1202, 1234, 1450, 1759
RseI	CAYNNNNRTG	1 cut(s)	1649
Rsr2I	CGGWCCG	1 cut(s)	753
RsrII	CGGWCCG	1 cut(s)	753
SacI	GAGCTC	2 cut(s)	549, 1080
SapI	GCTCTTC	1 cut(s)	1352
SaqAI	TTAA	3 cut(s)	90, 651, 1893
Sau96I	GGNCC	6 cut(s)	169, 287, 583, 584, 753, 848
ScaI	AGTACT	1 cut(s)	1760
SchI	GAGTC	4 cut(s)	454, 689, 1287, 1545
ScrFI	CCNGG	4 cut(s)	76, 264, 559, 1811
SduI	GDGCHC	5 cut(s)	549, 587, 681, 1080, 1835
SfaNI	GCATC	2 cut(s)	633, 1978
SfcI	CTRYAG	1 cut(s)	1768
SfoI	GGCGCC	2 cut(s)	391, 1642
Sfr274I	CTCGAG	3 cut(s)	781, 866, 1499
SfuI	TTCGAA	1 cut(s)	962
SinI	GGWCC	3 cut(s)	169, 287, 753
SlaI	CTCGAG	3 cut(s)	781, 866, 1499
SmiMI	CAYNNNNRTG	1 cut(s)	1649
SmlI	CTYRAG	4 cut(s)	781, 866, 1499, 1762
SmoI	CTYRAG	4 cut(s)	781, 866, 1499, 1762
Sse9I	AATT	4 cut(s)	714, 1117, 1257, 1335
SspDI	GGCGCC	2 cut(s)	389, 1640
SspMI	CTAG	4 cut(s)	275, 284, 1937, 1981
SstI	GAGCTC	2 cut(s)	549, 1080
StyD4I	CCNGG	4 cut(s)	74, 262, 557, 1809
TaaI	ACNGT	7 cut(s)	99, 192, 435, 451, 727, 757, 1483
TaiI	ACGT	6 cut(s)	432, 528, 899, 991, 1125, 1608
TaqI	TCGA	9 cut(s)	782, 867, 933, 962, 1326, 1333, 1500, 1835, 1972
TasI	AATT	4 cut(s)	714, 1117, 1257, 1335
TatI	WGTACW	2 cut(s)	1175, 1758
TauI	GCSGC	7 cut(s)	16, 56, 333, 336, 390, 487, 789
TfiI	GAWTC	5 cut(s)	411, 948, 959, 1371, 1732
Tru1I	TTAA	3 cut(s)	90, 651, 1893
Tru9I	TTAA	3 cut(s)	90, 651, 1893
TscAI	CASTG	1 cut(s)	1488
TseFI	GTSAC	1 cut(s)	760
TseI	GCWGC	7 cut(s)	80, 481, 487, 520, 570, 860, 1133
Tsp45I	GTSAC	1 cut(s)	760
TspDTI	ATGAA	3 cut(s)	1176, 1564, 1732
TspGWI	ACGGA	5 cut(s)	255, 415, 960, 1348, 1728
TspRI	CASTG	1 cut(s)	1488
VpaK11BI	GGWCC	3 cut(s)	169, 287, 753
VspI	ATTAAT	1 cut(s)	651
XapI	RAATTY	2 cut(s)	714, 1257
XceI	RCATGY	1 cut(s)	802
XcmI	CCANNNNNNNNNTGG	1 cut(s)	688
XhoI	CTCGAG	3 cut(s)	781, 866, 1499
XspI	CTAG	4 cut(s)	275, 284, 1937, 1981
ZrmI	AGTACT	1 cut(s)	1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.