MD15G1140100.v1.1

MACPF domain-containing protein At4g24290-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0015525
Physical Location & Seq
Forward (+)
10304409 .. 10310026
5618 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1140100.v1.1.491

Sequence Viewer

Length: 1869 bp
ATGAGAAAGTGGGAGAAAAATACACAGGGAGAGATGAGCGGTCGGACGAGTGGGAAGAGAAGGGCGGCGGCGGAGGCGGAGCTTGCAATACAGTCGATAGGGTTGGGGTATGATTTGACCGTGGACTTGAAGCTCAAGTACTGCAAGAGGCAGCAGTCAGGGCTTGATAGTCGGTTGATCGTCATCGATGATGATCAAGTTCGAGAGATTGCGGTTCCAGGCGCAGGCGGCGTTTGCATACCCAATGTCCCAAAGTCCATCAAATGCGACAAAGGCGAGCGCATGCGGTTCGCCTCTGACGTCCTCTCCTTCCAACAGATGTCGGAGCAATTCAACCAGGAAGTGGGTGTGTCAGGTAAAATACCAACAGGGCAGTTCAATACAGCTTTTGAGTTTACAGGAGGATGGCAAAAGGACGCTGCCAACACCAAAACACTTGCTTTTGATGGAGTCTCCATCACCCTCTACAGCGTTGCTCTCGATAAATCCCAGGTTGCCTTGTGTGACCATATCAAACAAGCTGTCCCCTCCTCCTGGGATCCCGCCGCACTTGCTAGGTTTATCGACAAGTATGGCACACATGTCATCGTTGGGATCAAAATGGGTGGAAGGGATACCATATATGCCAAGCAGCAGCACTCCTCGCCTCTCCAACCTGCTGATGTTCAGAAAAAATTGAAGGACATGGCTGATAAAATATATATAGATGCAACTGCTCACTCTAGTCTCACTTCCGAAAAGTTGTATGAGAGAGATAAGTTAGTCAAGGAGTCAAGGGCTATCATGGATAATATCCCATCCAGTTCTTATGCATCTGTAGAGTTTCAGGATATTAAATTCATGTGCAAGCGGAAGGGTGGAAGCTTGTATAAAAATCTGCCCCACAATGATTGGTGTCAAACAGTTCAGACTGAACCTGATGTGATCTCAATGTCATTAGTTCCTATCCAATCCTTACTGAGTGGGATACATGGGAGTGGATTTTTGAGCCATGCTATTAATCTCTATCTTCGTTATAAACCGCCAATTGAAGAGCTGCATCAATTTTTGGAGTTTCAACTTCCAAGGCAGTGGGCACCGGTGTTTGGTGAGCTTGCTCTTGGTCCTCAGAGGCAGCAGCAAAGCGGTGCATCTTTACAGTTTAGCTTCATGGGTCCTAAGCTTTATGTTAACACAAATCCGGTTGATGTGGGTAAGAAGCCGGTGACTGGCCTCCGGTTGTATTTGGAGGGAAAAAGAAGCAACTGCTTGGCAATTCACCTGCAGCATCTCTCTACGCTGCCAAAGACCTTCCAGCTCCAGGATGCGGTGAATGGAAATATCTCTAAACTTTCATCAGACCGTAGATACTTCGAAAAGGTTCAATGGAAGAGCTTCTCTCATGTCTGCACAGCTCCTGTTGAGGCTAATGATGATTTGTCCGTCGTCACTGGCGCTCACTTTGAAGTTGGAGACTCTGGCCTGAAGAAAGTTTTATTTTTACGGCTTCATTTTTCTAAAGTAATAGGTGCGACTAATGTTAGACAGGCTGAGTGGGATGGTTCCCCTGGCTTGGCGCAGAAATCTGGATTAATTTCAACCCTTATTAGCACCCGTTTCTCGAGTGCTAAGAAGCAACCTCCTCAGCCTGCTGATGTGAACATAAACTCGGCTGTTTATCCTGGGGGCCCTCCAGTGCCAACACAGACACCTAAACTATTGAGGTTTGTGGACACGACGGAAATGACAAGAGGACCGCAGGATTCACCTGGGTATTGGGTTGTGTCGGGGGCAAGGCTTATCGCTGAGAATGGTAAAATATCTCTACGAGTCAAGTATTCTCTGCTGACCATGATTTTGCCTGATGAAGAGATGCAAGATAACTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MACPF

Protein Analysis

623

Amino Acids

68.86

Weight (kDa)

9.01

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MACPF PF01823 125 - 336 3.3e-36 MAC/Perforin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015525)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25760 FvH4_1g25760
malus_domestica MD15G1140100.v1.1
prunus_persica Prupe.4G285900_v2.0.a1
pyrus_communis pycom15g12660
rosa_chinensis RchiOBHm_Chr3g0484761
rosa_laevigata RLG00000023205
rosa_multiflora Rmu_sc0001689.1_g000010 Rmu_sc0006653.1_g000005
rosa_roxburghii Rroxscaffold_6G00397460
rosa_rugosa Rorug03G0213800
rosa_samantha Rh3AG264100 Rh3BG299100 Rh3CG296900 Rh3DG292700
rosa_wichuraiana Rw3G023550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1017
AarI CACCTGC 1 cut(s) 1269
AatII GACGTC 1 cut(s) 303
Acc36I ACCTGC 2 cut(s) 664, 1269
AccB1I GGYRCC 1 cut(s) 1075
AccB7I CCANNNNNTGG 1 cut(s) 343
AccBSI CCGCTC 1 cut(s) 39
AclWI GGATC 3 cut(s) 533, 546, 602
AcsI RAATTY 1 cut(s) 836
AcuI CTGAAG 1 cut(s) 1484
AcyI GRCGYC 1 cut(s) 300
AfaI GTAC 1 cut(s) 140
AfiI CCNNNNNNNGG 8 cut(s) 224, 343, 534, 1085, 1208, 1300, 1306, 1552
AflIII ACRYGT 1 cut(s) 580
AgeI ACCGGT 1 cut(s) 1078
AgsI TTSAA 9 cut(s) 130, 334, 379, 679, 1031, 1058, 1364, 1445, 1578
AjnI CCWGG 8 cut(s) 217, 336, 489, 533, 1299, 1546, 1660, 1747
Alw26I GTCTC 3 cut(s) 457, 731, 1446
AlwI GGATC 3 cut(s) 533, 546, 602
AlwNI CAGNNNCTG 1 cut(s) 1397
Ama87I CYCGRG 1 cut(s) 1600
AoxI GGCC 3 cut(s) 1210, 1459, 1666
ApaI GGGCCC 1 cut(s) 1670
ApeKI GCWGC 9 cut(s) 151, 419, 631, 634, 1036, 1114, 1117, 1264, 1279
ApoI RAATTY 1 cut(s) 836
ArsI GACNNNNNNTTYG 4 cut(s) 507, 539, 1819, 1851
AseI ATTAAT 2 cut(s) 999, 1571
AsiGI ACCGGT 1 cut(s) 1078
Asp700I GAANNNNTTC 2 cut(s) 1359, 1373
AspLEI GCGC 4 cut(s) 224, 282, 1436, 1558
AspS9I GGNCC 5 cut(s) 1103, 1154, 1666, 1667, 1733
AsuHPI GGTGA 6 cut(s) 451, 1100, 1216, 1250, 1321, 1737
AsuII TTCGAA 1 cut(s) 1353
AvaI CYCGRG 1 cut(s) 1600
AvaII GGWCC 3 cut(s) 1103, 1154, 1733
BaeGI GKGCMC 2 cut(s) 1078, 1670
BamHI GGATCC 1 cut(s) 538
BanI GGYRCC 1 cut(s) 1075
BanII GRGCYC 1 cut(s) 1670
BarI GAAGNNNNNNTAC 2 cut(s) 122, 154
BbvCI CCTCAGC 1 cut(s) 1623
BbvI GCAGC 9 cut(s) 163, 406, 643, 646, 1023, 1126, 1129, 1266, 1276
BccI CCATC 6 cut(s) 266, 399, 440, 464, 805, 1532
BceAI ACGGC 1 cut(s) 1499
BcgI CGANNNNNNTGC 4 cut(s) 75, 109, 271, 305
BciT130I CCWGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
BciVI GTATCC 2 cut(s) 607, 960
BclI TGATCA 1 cut(s) 193
BcoDI GTCTC 3 cut(s) 457, 731, 1446
BfaI CTAG 2 cut(s) 555, 723
BfmI CTRYAG 3 cut(s) 466, 816, 1262
BfoI RGCGCY 1 cut(s) 1437
BfuAI ACCTGC 2 cut(s) 664, 1269
BfuI GTATCC 2 cut(s) 607, 960
BmcAI AGTACT 1 cut(s) 140
Bme1390I CCNGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
Bme18I GGWCC 3 cut(s) 1103, 1154, 1733
BmeT110I CYCGRG 1 cut(s) 1600
BmgT120I GGNCC 5 cut(s) 1103, 1154, 1666, 1667, 1733
BmiI GGNNCC 7 cut(s) 216, 540, 1077, 1155, 1543, 1667, 1668
BmrFI CCNGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
BmsI GCATC 7 cut(s) 697, 821, 1048, 1139, 1276, 1294, 1842
BplI GAGNNNNNCTC 2 cut(s) 1363, 1395
BpmI CTGGAG 2 cut(s) 1283, 1656
Bpu10I CCTNAGC 2 cut(s) 1158, 1623
Bpu14I TTCGAA 1 cut(s) 1353
BpuEI CTTGAG 1 cut(s) 119
Bsa29I ATCGAT 1 cut(s) 186
BsaBI GATNNNNATC 2 cut(s) 182, 192
BsaHI GRCGYC 1 cut(s) 300
BsaJI CCNNGG 7 cut(s) 120, 489, 534, 1064, 1546, 1661, 1748
BsaWI WCCGGW 3 cut(s) 1078, 1180, 1215
BsaXI ACNNNNNCTCC 2 cut(s) 290, 320
Bsc4I CCNNNNNNNGG 8 cut(s) 224, 343, 534, 1085, 1208, 1300, 1306, 1552
Bse118I RCCGGY 2 cut(s) 1078, 1201
Bse1I ACTGG 4 cut(s) 801, 1213, 1435, 1673
Bse8I GATNNNNATC 2 cut(s) 182, 192
BseBI CCWGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
BseCI ATCGAT 1 cut(s) 186
BseDI CCNNGG 7 cut(s) 120, 489, 534, 1064, 1546, 1661, 1748
BseGI GGATG 4 cut(s) 410, 797, 1309, 1543
BseJI GATNNNNATC 2 cut(s) 182, 192
BseLI CCNNNNNNNGG 8 cut(s) 224, 343, 534, 1085, 1208, 1300, 1306, 1552
BseMII CTCAG 5 cut(s) 950, 1121, 1521, 1637, 1776
BseNI ACTGG 4 cut(s) 801, 1213, 1435, 1673
BseRI GAGGAG 3 cut(s) 520, 631, 1611
BseSI GKGCMC 2 cut(s) 1078, 1670
BseXI GCAGC 9 cut(s) 163, 406, 643, 646, 1023, 1126, 1129, 1266, 1276
BsgI GTGCAG 1 cut(s) 1372
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 3 cut(s) 1212, 1461, 1668
BshNI GGYRCC 1 cut(s) 1075
BshTI ACCGGT 1 cut(s) 1078
BshVI ATCGAT 1 cut(s) 186
BsiEI CGRYCG 1 cut(s) 43
BsiHKCI CYCGRG 1 cut(s) 1600
BsiSI CCGG 4 cut(s) 1079, 1181, 1202, 1216
BslFI GGGAC 2 cut(s) 233, 509
BslI CCNNNNNNNGG 8 cut(s) 224, 343, 534, 1085, 1208, 1300, 1306, 1552
BsmAI GTCTC 3 cut(s) 457, 731, 1446
BsmFI GGGAC 2 cut(s) 233, 509
BsnI GGCC 3 cut(s) 1212, 1461, 1668
BsoBI CYCGRG 1 cut(s) 1600
Bsp119I TTCGAA 1 cut(s) 1353
Bsp120I GGGCCC 1 cut(s) 1666
Bsp1286I GDGCHC 2 cut(s) 1078, 1670
Bsp143I GATC 5 cut(s) 177, 193, 538, 594, 924
BspANI GGCC 3 cut(s) 1212, 1461, 1668
BspCNI CTCAG 5 cut(s) 951, 1120, 1522, 1636, 1777
BspDI ATCGAT 1 cut(s) 186
BspLI GGNNCC 7 cut(s) 216, 540, 1077, 1155, 1543, 1667, 1668
BspMAI CTGCAG 1 cut(s) 1266
BspMI ACCTGC 2 cut(s) 664, 1269
BspPI GGATC 3 cut(s) 533, 546, 602
BspQI GCTCTTC 2 cut(s) 1026, 1364
BspT104I TTCGAA 1 cut(s) 1353
BspT107I GGYRCC 1 cut(s) 1075
BsrBI CCGCTC 1 cut(s) 39
BsrFI RCCGGY 2 cut(s) 1078, 1201
BsrI ACTGG 4 cut(s) 801, 1213, 1435, 1673
BssAI RCCGGY 2 cut(s) 1078, 1201
BssECI CCNNGG 7 cut(s) 120, 489, 534, 1064, 1546, 1661, 1748
BssMI GATC 5 cut(s) 177, 193, 538, 594, 924
BssNI GRCGYC 1 cut(s) 300
BssT1I CCWWGG 1 cut(s) 1064
Bst2UI CCWGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
Bst4CI ACNGT 5 cut(s) 93, 121, 904, 1140, 1343
Bst6I CTCTTC 4 cut(s) 50, 1026, 1364, 1842
BstACI GRCGYC 1 cut(s) 300
BstBI TTCGAA 1 cut(s) 1353
BstC8I GCNNGC 7 cut(s) 84, 226, 278, 284, 848, 1095, 1629
BstDEI CTNAG 7 cut(s) 959, 1107, 1158, 1530, 1608, 1623, 1785
BstDSI CCRYGG 1 cut(s) 120
BstF5I GGATG 4 cut(s) 410, 797, 1309, 1543
BstH2I RGCGCY 1 cut(s) 1437
BstHHI GCGC 4 cut(s) 224, 282, 1436, 1558
BstKTI GATC 5 cut(s) 180, 196, 541, 597, 927
BstMAI GTCTC 3 cut(s) 457, 731, 1446
BstMBI GATC 5 cut(s) 177, 193, 538, 594, 924
BstMCI CGRYCG 1 cut(s) 43
BstMWI GCNNNNNNNGC 8 cut(s) 74, 83, 160, 228, 234, 273, 551, 643
BstNI CCWGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
BstNSI RCATGY 2 cut(s) 286, 584
BstSCI CCNGG 8 cut(s) 217, 336, 489, 533, 1299, 1546, 1660, 1747
BstSFI CTRYAG 3 cut(s) 466, 816, 1262
BstSLI GKGCMC 2 cut(s) 1078, 1670
BstV1I GCAGC 9 cut(s) 163, 406, 643, 646, 1023, 1126, 1129, 1266, 1276
BstX2I RGATCY 1 cut(s) 538
BstXI CCANNNNNNTGG 1 cut(s) 1071
BstYI RGATCY 1 cut(s) 538
Bsu15I ATCGAT 1 cut(s) 186
BsuI GTATCC 2 cut(s) 607, 960
BsuRI GGCC 3 cut(s) 1212, 1461, 1668
BsuTUI ATCGAT 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 120
BtsCI GGATG 4 cut(s) 410, 797, 1309, 1543
BtsI GCAGTG 1 cut(s) 1076
BtsIMutI CAGTG 3 cut(s) 1076, 1428, 1680
BveI ACCTGC 2 cut(s) 664, 1269
Cac8I GCNNGC 7 cut(s) 84, 226, 278, 284, 848, 1095, 1629
CaiI CAGNNNCTG 1 cut(s) 1397
CfoI GCGC 4 cut(s) 224, 282, 1436, 1558
Cfr10I RCCGGY 2 cut(s) 1078, 1201
Cfr13I GGNCC 5 cut(s) 1103, 1154, 1666, 1667, 1733
ClaI ATCGAT 1 cut(s) 186
CseI GACGC 1 cut(s) 425
Csp6I GTAC 1 cut(s) 139
CspAI ACCGGT 1 cut(s) 1078
CspCI CAANNNNNGTGG 4 cut(s) 586, 621, 872, 907
CviQI GTAC 1 cut(s) 139
DdeI CTNAG 7 cut(s) 959, 1107, 1158, 1530, 1608, 1623, 1785
DpnI GATC 5 cut(s) 179, 195, 540, 596, 926
DpnII GATC 5 cut(s) 177, 193, 538, 594, 924
Eam1104I CTCTTC 4 cut(s) 50, 1026, 1364, 1842
EarI CTCTTC 4 cut(s) 50, 1026, 1364, 1842
EciI GGCGGA 2 cut(s) 86, 92
Eco130I CCWWGG 1 cut(s) 1064
Eco24I GRGCYC 1 cut(s) 1670
Eco47I GGWCC 3 cut(s) 1103, 1154, 1733
Eco57I CTGAAG 1 cut(s) 1484
Eco88I CYCGRG 1 cut(s) 1600
EcoO109I RGGNCCY 3 cut(s) 1154, 1666, 1667
EcoRII CCWGG 8 cut(s) 217, 336, 489, 533, 1299, 1546, 1660, 1747
EcoT14I CCWWGG 1 cut(s) 1064
EcoT22I ATGCAT 1 cut(s) 814
EcoT38I GRGCYC 1 cut(s) 1670
ErhI CCWWGG 1 cut(s) 1064
FaqI GGGAC 2 cut(s) 233, 509
FauI CCCGC 1 cut(s) 550
FbaI TGATCA 1 cut(s) 193
FokI GGATG 4 cut(s) 417, 784, 1316, 1550
FriOI GRGCYC 1 cut(s) 1670
FspBI CTAG 2 cut(s) 555, 723
GlaI GCGC 4 cut(s) 223, 281, 1435, 1557
GsuI CTGGAG 2 cut(s) 1283, 1656
HaeII RGCGCY 1 cut(s) 1437
HaeIII GGCC 3 cut(s) 1212, 1461, 1668
HapII CCGG 4 cut(s) 1079, 1181, 1202, 1216
HgaI GACGC 1 cut(s) 425
HhaI GCGC 4 cut(s) 224, 282, 1436, 1558
Hin1I GRCGYC 1 cut(s) 300
Hin6I GCGC 4 cut(s) 222, 280, 1434, 1556
HinP1I GCGC 4 cut(s) 222, 280, 1434, 1556
HincII GTYRAC 1 cut(s) 1171
HindII GTYRAC 1 cut(s) 1171
HindIII AAGCTT 2 cut(s) 862, 1160
HinfI GANTC 5 cut(s) 450, 770, 1454, 1742, 1809
HpaI GTTAAC 1 cut(s) 1171
HpaII CCGG 4 cut(s) 1079, 1181, 1202, 1216
HphI GGTGA 6 cut(s) 451, 1100, 1216, 1250, 1321, 1737
Hpy166II GTNNAC 5 cut(s) 124, 396, 1171, 1639, 1711
Hpy188I TCNGA 8 cut(s) 45, 298, 325, 669, 736, 909, 1110, 1339
Hpy188III TCNNGA 5 cut(s) 203, 479, 827, 1566, 1600
Hpy8I GTNNAC 5 cut(s) 124, 396, 1171, 1639, 1711
Hpy99I CGWCG 2 cut(s) 1427, 1720
HpyAV CCTTC 6 cut(s) 54, 319, 603, 673, 847, 1300
HpyCH4III ACNGT 5 cut(s) 93, 121, 904, 1140, 1343
HpyCH4IV ACGT 1 cut(s) 300
HpyF10VI GCNNNNNNNGC 8 cut(s) 74, 83, 160, 228, 234, 273, 551, 643
HpyF3I CTNAG 7 cut(s) 959, 1107, 1158, 1530, 1608, 1623, 1785
HpySE526I ACGT 1 cut(s) 300
Hsp92I GRCGYC 1 cut(s) 300
HspAI GCGC 4 cut(s) 222, 280, 1434, 1556
Ksp22I TGATCA 1 cut(s) 193
KspAI GTTAAC 1 cut(s) 1171
Kzo9I GATC 5 cut(s) 177, 193, 538, 594, 924
LguI GCTCTTC 2 cut(s) 1026, 1364
LmnI GCTCC 4 cut(s) 79, 325, 1302, 1399
Lsp1109I GCAGC 9 cut(s) 163, 406, 643, 646, 1023, 1126, 1129, 1266, 1276
LweI GCATC 7 cut(s) 697, 821, 1048, 1139, 1276, 1294, 1842
MaeI CTAG 2 cut(s) 555, 723
MaeII ACGT 1 cut(s) 300
MaeIII GTNAC 3 cut(s) 503, 1204, 1426
MalI GATC 5 cut(s) 179, 195, 540, 596, 926
MbiI CCGCTC 1 cut(s) 39
MboI GATC 5 cut(s) 177, 193, 538, 594, 924
MboII GAAGA 6 cut(s) 67, 1001, 1043, 1381, 1477, 1859
MfeI CAATTG 1 cut(s) 1026
MflI RGATCY 1 cut(s) 538
MhlI GDGCHC 2 cut(s) 1078, 1670
MluCI AATT 7 cut(s) 329, 674, 836, 1026, 1043, 1254, 1572
MlyI GAGTC 4 cut(s) 459, 779, 1448, 1818
MmeI TCCRAC 5 cut(s) 23, 303, 337, 676, 1429
Mph1103I ATGCAT 1 cut(s) 814
MroXI GAANNNNTTC 2 cut(s) 1359, 1373
MseI TTAA 4 cut(s) 834, 999, 1170, 1571
MslI CAYNNNNRTG 1 cut(s) 975
MspI CCGG 4 cut(s) 1079, 1181, 1202, 1216
MspR9I CCNGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
MunI CAATTG 1 cut(s) 1026
MvaI CCWGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
MwoI GCNNNNNNNGC 8 cut(s) 74, 83, 160, 228, 234, 273, 551, 643
NdeII GATC 5 cut(s) 177, 193, 538, 594, 924
NlaIV GGNNCC 7 cut(s) 216, 540, 1077, 1155, 1543, 1667, 1668
NmeAIII GCCGAG 1 cut(s) 1628
NmuCI GTSAC 3 cut(s) 503, 1204, 1426
NsiI ATGCAT 1 cut(s) 814
NspI RCATGY 2 cut(s) 286, 584
NspV TTCGAA 1 cut(s) 1353
PaeI GCATGC 1 cut(s) 286
PaeR7I CTCGAG 1 cut(s) 1600
PaqCI CACCTGC 1 cut(s) 1269
PciI ACATGT 1 cut(s) 580
PciSI GCTCTTC 2 cut(s) 1026, 1364
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PdmI GAANNNNTTC 2 cut(s) 1359, 1373
PfeI GAWTC 1 cut(s) 1742
PflMI CCANNNNNTGG 1 cut(s) 343
PfoI TCCNGGA 1 cut(s) 1299
PinAI ACCGGT 1 cut(s) 1078
PleI GAGTC 4 cut(s) 458, 778, 1448, 1817
PpsI GAGTC 4 cut(s) 458, 778, 1448, 1817
PpuMI RGGWCCY 1 cut(s) 1154
PscI ACATGT 1 cut(s) 580
PshBI ATTAAT 2 cut(s) 999, 1571
PsiI TTATAA 1 cut(s) 1017
Psp5II RGGWCCY 1 cut(s) 1154
Psp6I CCWGG 8 cut(s) 217, 336, 489, 533, 1299, 1546, 1660, 1747
PspGI CCWGG 8 cut(s) 217, 336, 489, 533, 1299, 1546, 1660, 1747
PspN4I GGNNCC 7 cut(s) 216, 540, 1077, 1155, 1543, 1667, 1668
PspOMI GGGCCC 1 cut(s) 1666
PspPI GGNCC 5 cut(s) 1103, 1154, 1666, 1667, 1733
PspPPI RGGWCCY 1 cut(s) 1154
PstI CTGCAG 1 cut(s) 1266
PstNI CAGNNNCTG 1 cut(s) 1397
PsuI RGATCY 1 cut(s) 538
RsaI GTAC 1 cut(s) 140
RsaNI GTAC 1 cut(s) 139
RseI CAYNNNNRTG 1 cut(s) 975
SapI GCTCTTC 2 cut(s) 1026, 1364
SaqAI TTAA 4 cut(s) 834, 999, 1170, 1571
Sau3AI GATC 5 cut(s) 177, 193, 538, 594, 924
Sau96I GGNCC 5 cut(s) 1103, 1154, 1666, 1667, 1733
ScaI AGTACT 1 cut(s) 140
SchI GAGTC 4 cut(s) 459, 779, 1448, 1818
ScrFI CCNGG 8 cut(s) 219, 338, 491, 535, 1301, 1548, 1662, 1749
SduI GDGCHC 2 cut(s) 1078, 1670
SfaNI GCATC 7 cut(s) 697, 821, 1048, 1139, 1276, 1294, 1842
SfcI CTRYAG 3 cut(s) 466, 816, 1262
Sfr274I CTCGAG 1 cut(s) 1600
SfuI TTCGAA 1 cut(s) 1353
SgrAI CRCCGGYG 1 cut(s) 1078
SinI GGWCC 3 cut(s) 1103, 1154, 1733
SlaI CTCGAG 1 cut(s) 1600
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 2 cut(s) 134, 1600
SmoI CTYRAG 2 cut(s) 134, 1600
SphI GCATGC 1 cut(s) 286
Sse9I AATT 7 cut(s) 329, 674, 836, 1026, 1043, 1254, 1572
SspMI CTAG 2 cut(s) 555, 723
StyD4I CCNGG 8 cut(s) 217, 336, 489, 533, 1299, 1546, 1660, 1747
StyI CCWWGG 1 cut(s) 1064
TaaI ACNGT 5 cut(s) 93, 121, 904, 1140, 1343
TaiI ACGT 1 cut(s) 303
TaqI TCGA 7 cut(s) 95, 186, 202, 480, 564, 1353, 1601
TasI AATT 7 cut(s) 329, 674, 836, 1026, 1043, 1254, 1572
TatI WGTACW 1 cut(s) 138
TauI GCSGC 4 cut(s) 68, 71, 231, 548
TfiI GAWTC 1 cut(s) 1742
Tru1I TTAA 4 cut(s) 834, 999, 1170, 1571
Tru9I TTAA 4 cut(s) 834, 999, 1170, 1571
TscAI CASTG 3 cut(s) 1076, 1435, 1680
TseFI GTSAC 3 cut(s) 503, 1204, 1426
TseI GCWGC 9 cut(s) 151, 419, 631, 634, 1036, 1114, 1117, 1264, 1279
Tsp45I GTSAC 3 cut(s) 503, 1204, 1426
TspDTI ATGAA 5 cut(s) 829, 1138, 1323, 1478, 1860
TspGWI ACGGA 2 cut(s) 1411, 1733
TspRI CASTG 3 cut(s) 1076, 1435, 1680
Van91I CCANNNNNTGG 1 cut(s) 343
VpaK11BI GGWCC 3 cut(s) 1103, 1154, 1733
VspI ATTAAT 2 cut(s) 999, 1571
XapI RAATTY 1 cut(s) 836
XceI RCATGY 2 cut(s) 286, 584
XhoI CTCGAG 1 cut(s) 1600
XmnI GAANNNNTTC 2 cut(s) 1359, 1373
XspI CTAG 2 cut(s) 555, 723
ZraI GACGTC 1 cut(s) 301
ZrmI AGTACT 1 cut(s) 140
Zsp2I ATGCAT 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.