MD15G1153000.v1.1

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
11324783 .. 11332514
7732 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1153000.v1.1.491

Sequence Viewer

Length: 4200 bp
ATGGCGTTGCTGCGCAAACTGTTCTATCGGAAGCCGCCTGATGGACTCTTCGAGATCTGCGAGCGAGTTTACGTTTTTGATTGCTGCTTCACTACCGATGCGTGGAAGGAAGAAAACTATAAGGTTTACATAGGTGGGATAGTTGGTCAACTCCAAGATCACTTGCCAGATGCTTCATTCTTGGTGTTCAATTTCCATGATGGTGTGGCACAAAGCCAGATGGCCAGCATTTTGTCCGAGTATGACATGACCATTATGGATTACCCGCGGCACTTTGAAGGTTGTCCGGTGCTCACACTAGAGCTGATCCATCACTTTCTGAGATCAAGTGAAAGTTGGTTATCGCTCGGACAGAATAATGTGCTGTTGATGCACTGCGAACGTGGAGGTTGGCCTGTTTTGGCTTTCATGCTGTCTGCACTCTTGATTTACCATAAACAATATAGTGGCGAGCAGAGGACGTTGGACATGGTTTACAGGCAGGCTCCTTCTGAGCTTTTGCATTTGTTATCACCTCTAAATCCAATCCCTTCTCAACTGAGGTATCTCCAGTATGTGACGAGGAGAAATGTAGCCTTGGAATGGCCTCCTCTGGATCGAGCGCTTACCTTGGAGTGCGTCATTTTCAGATTTGTTCCTAACTTTGATGGGCAGGGTGGTTGCCGTCCTATTTTCCGCATATATGGACAGGACCCTTTTCTTGCTAATGATAAAACTCCAAAAGTCTTATTCTCAACCCCAAAGAAAGGAAAACCCATACGGGCTTACAAGCAGGTAGAATGTGAACTGGTTAAAATTGACATTAATTGCCATATTCAAGGTGATGTTGTGGTCGAATGTATTAGCCTACATGATGACTTGGAACGTGAGGAGATGATGTTCCGTGTCATGTTCAATACGGCTTTTATTAGGTCTAACATTTTGATGCTCAACCGTGATGAAATTGACATGCTGTGGGATGCTAAGGAACAATTTCCAAAGGACTTCAGAGTAGAGATCCTTTTTTCAGAGATGGATGCTGTCACATCCATCATCCTGGGTGGCATGTCATGCTTTGAGGACAAGGAGGGCCTTCCGATGGAAGCATTTGCTCAAGTTCAAGAGATCTTTAACTACGTGGATTGGTTAGACCCCAAGTCAGATGCCACACTTAATGTGCTACAAGCAGCATCAAATATTATCCAAGAAAAATTAAACAGTGATTCTCCACGGAGTACTGGGAACGACTCGCAGGAAACAAGTCCAGGAAAGACCCCGAAGAAAAAGAACCTTCTCTTCTCTGATGACATGCAATCTGTGGCCTCACCGAGGCAATCTCAAGATACCAGTGTGAGTAAACAGCAAGCTAAACCCCAAGACATCCCAGCTACACCTCAGCCACCCAATCAAGGTGATTCAGTATCCCAGCATATTCCCCAACCTTCTCATTCAACCACAATGGGAGCATTTGCTCAAGTTCAAGAGATCTTTAACCATGCCACCTCACATATGCAGTCCCCAGATTCCACTGTGAGTAAACAGGAAGCTAAACCTTCAAAGACCGCACTTCAGCCACCCGATAAACATGATTCTGTGAGCCAGAAGATGCCCCAACCTTCTAAGTCAACCCCAATGGAAGCTAAATCTCAAGACATTCATACTGCACTTCAGCCAACCAATAAGCAGGATGCAGTGAGCCAGAAGATACCCCAACCTTCTCAGTCAACCCTGATGGACACTAAACCTCAAGACATCCATACTGCGACTAAACAAGAAGCCAAACCTCAAGATGTTTGTAGTGCGATTAAACAGGAAGCCAACCCTCAAGACATTCATGCTGCAATTCAGGTACCCAATAAATGTGATTCAGTGAGCCAGCAGAGGCCCGAAGCTTCTCAGTCAACACCAATGGAAGCAGCTAAACCTCAAGACAATCCTACTGTGAAGAAACACGAAGCTAAACCTCAAGACATTCCTACTGCGAAGAAACAGGAAGCTAAACCTCAAGACATTCCTTCTGCGAAGAAACAGGAAGCTAAACCTCAAGACATTCCTACGGCCACGAAACAGGAAGCTAAACCTCAAGACATTCCTACTGTGAAGAAACAGGAAGCTAAACCTCAAGACATTCCTACTACACTTCAGCCATCCGATAAACTCGATTCGGTAAGCCAGAAGCTGCCGCAACCTTCTCAGTCATCCCCGATGGAAGCATTCAGTCAAGTTCAAGAGATCTTTAGCCATGCAGCCTCACCGGTGCAGTATCCAGATACCACTATGAGTAAACAGGAAGGTAAACCTCAAGATATTCATGCTGTGGAAGTTAGAAGTGCTCCAGTTGCACCATTATCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCGCCACCTTCCAAGAGTACTTGTGCTAAAACAACTCTTCCTTCTCCTCCCAAACCGCAACTTCTGCCGCCTGATGTTTTAGTTTCAAAACCTGAAGACCCATCACTTTCTGAAGAGACTAAAAACTATTCATCGGATGGAGCCCAACAATCAACCACTAGTCATCCAGCTGCCACTGGGATGCCAACCTCAAGTACCATTTCTGGCAAGGTGTTACCTAAAGCACCACCCACTCCGCGTTCTGAGGTTTCTTCATCAACCCGGCCTCCTCCAACTCCTCCAACTCCCCCACCACCTCCTCCAACACCGCCTTTGAAAGAGAACCTTTTTGACGGCTCCAGACCTCCGCCGCCTCCACCTCCTCCTCTTCACTCAGGGCAAGCTGGAGGCACTACAATCTCATCCCCAGTTCCACCACCACCTACTGCTCCCACTTCTTCCGCCAAACATGGAGCTCCTTCTGCCCCTCCTCCTCCACCTCCTATTGGTAAAGGAGGTTCTAAGCCGGGTAACCCTCCCCCACCACCTATTAGTTCCCCTGGTGGTGCAAAAGGACGCCTACTACGTACCATAAGTTCAAAAAATAATAATTCAAAAAAACTGAAGCCGTTGCACTGGTTAAAATTGTCAAGAGCGGTTCAGGGAAGCTTATGGGCTGAGGCACAAAAATCTGATGAAGAGGCCAAGGCTCCTGAGATTGACATGTCAGAGCTTGAGACTCTTTTCTCAGTGGCCGCTCCGGCCCAGGATAAGGGTAGGAAGTCAGCCGCACATGGTTCGGTTGCCCCTAAATCTGAAAAAGTACAACTGATTGACCACAGGCGAGCGTACAACTGTGAAATCATGCTTTCAAAGGTGAAGGTTCCGTTGAACGAGTTAATGGATTCGGTACTTGCCCTGGAAGATACAGCATTAGATGTTGACCAGGTAGAGAACCTCATAAAGTTTTGCCCAACAAAAGAGGAGATGGAACTACTTAAGGGCTACACTGGAGAAAAGGAGAAGTTAGGAAAATGTGAACAGTTCCTCTTAGAGTTGATGAAAGTACCTCGAGTAGAATCTAAGCTCAGAGTTTTCTCATTCAAAATACAGTTCTCTTCCCAGGTCTCTGATCTTAGAAATAGCCTGAATGTAGTGAACTCTGCAGCAGAAGAGATCAGGAATTCTGGCAAATTGAAAAGAATCATGCAGACGATTCTTTCATTAGGAAACGCTTTGAACCAGGGGACAGCTCGGGGCTCTGCTATTGGATTTAGGTTGGATAGCCTTCTTAAACTGATTGAGACTCGCGCACGGAACAACAAGATGACTCTCATGCACTATCTTTGTAAGGTACTCGTTGACCAACTACCGGAGGTTCTAGATTTCTCTAAAGACCTGGGCAACTTAGAACCTGCATCAAGGATACAATTGAAATTTTTGGCGGAGGAAATGCAAGCTCTAAGTAAAGGATTGGAGAAAGTTGTACAGGAATTATCCACCTCTGAAAATGACGGTCCGATATCAGAAAAATTCCGTAAGATTCTAAAGGAGTTCCTCCGTTTCGCTGAAGGTGAAGTGAGGACTTTGGCCTCACTGTATTCTACCGTAGGTAGAAATGTAGACGCATTGATCCTTTATTTCGGAGAAGATCCCGCTAAGTGCCCTTTTGAACAAGTTGTTACAACCTTGCTCAACTTTGTCAGAATGTTCAACAAAGCCCATGATGAAAACTGCAAGCAAAGTGAGAACGAAATGAAGAAAGCGGCAGAAAGTGAGAAGCTTAAGATGGGCGCTTCGAAGGAATCCGAACGATTGTTGCGTACTCCGATCCAGAGCAGCAACGTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1400

Amino Acids

154.56

Weight (kDa)

6.78

Isoelectric Point (pI)

59.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 199 - 337 3.8e-40 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 982 - 1354 1.2e-120 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 14
Acc36I ACCTGC 2 cut(s) 763, 3769
Acc65I GGTACC 1 cut(s) 1828
AccB1I GGYRCC 1 cut(s) 1828
AccBSI CCGCTC 2 cut(s) 3002, 3104
AccI GTMKAC 1 cut(s) 3969
AccII CGCG 3 cut(s) 268, 2605, 3657
AclWI GGATC 6 cut(s) 301, 603, 991, 3973, 3992, 4171
AcoI YGGCCR 3 cut(s) 222, 2037, 3099
AcsI RAATTY 3 cut(s) 3529, 3782, 3878
AcuI CTGAAG 8 cut(s) 970, 1532, 1631, 2105, 2481, 2499, 2990, 3936
AcyI GRCGYC 1 cut(s) 2923
AfeI AGCGCT 1 cut(s) 603
AflII CTTAAG 2 cut(s) 3344, 4130
AflIII ACRYGT 1 cut(s) 3069
AgeI ACCGGT 1 cut(s) 2233
AhdI GACNNNNNGTC 1 cut(s) 1135
AhlI ACTAGT 1 cut(s) 2525
AjnI CCWGG 9 cut(s) 1035, 1243, 2905, 3111, 3264, 3291, 3468, 3588, 3744
AloI GAACNNNNNNTCC 2 cut(s) 863, 895
Alw21I GWGCWC 3 cut(s) 294, 2314, 2824
Alw26I GTCTC 4 cut(s) 2477, 3077, 3478, 3644
AlwI GGATC 6 cut(s) 301, 603, 991, 3973, 3992, 4171
AlwNI CAGNNNCTG 1 cut(s) 2158
Ama87I CYCGRG 2 cut(s) 3417, 3600
Aor51HI AGCGCT 1 cut(s) 603
ApoI RAATTY 3 cut(s) 3529, 3782, 3878
AseI ATTAAT 1 cut(s) 804
AsiGI ACCGGT 1 cut(s) 2233
Asp700I GAANNNNTTC 1 cut(s) 972
Asp718I GGTACC 1 cut(s) 1828
AspLEI GCGC 4 cut(s) 15, 604, 3659, 4142
AspS9I GGNCC 5 cut(s) 691, 1069, 1863, 3109, 3863
AsuC2I CCSGG 2 cut(s) 2629, 2874
AsuHPI GGTGA 8 cut(s) 504, 833, 1296, 1403, 2223, 2322, 3235, 3932
AsuII TTCGAA 1 cut(s) 4145
AvaI CYCGRG 2 cut(s) 3417, 3600
AvaII GGWCC 2 cut(s) 691, 3863
BaeGI GKGCMC 1 cut(s) 4013
BaeI ACNNNNGTAYC 4 cut(s) 527, 560, 1314, 1347
BalI TGGCCA 1 cut(s) 224
BanI GGYRCC 1 cut(s) 1828
BanII GRGCYC 3 cut(s) 2512, 2824, 3608
BbsI GAAGAC 1 cut(s) 2469
Bbv12I GWGCWC 3 cut(s) 294, 2314, 2824
BbvCI CCTCAGC 2 cut(s) 1374, 3024
BbvI GCAGC 8 cut(s) 71, 1178, 1804, 1907, 2145, 2237, 2524, 3524
BceAI ACGGC 5 cut(s) 648, 915, 2052, 2716, 2959
BcgI CGANNNNNNTGC 2 cut(s) 3126, 3160
BciT130I CCWGG 9 cut(s) 1037, 1245, 2907, 3113, 3266, 3293, 3470, 3590, 3746
BciVI GTATCC 3 cut(s) 1411, 2253, 3765
BcnI CCSGG 2 cut(s) 2629, 2874
BcoDI GTCTC 4 cut(s) 2477, 3077, 3478, 3644
BcuI ACTAGT 1 cut(s) 2525
BfaI CTAG 3 cut(s) 299, 2526, 3728
BfmI CTRYAG 1 cut(s) 3510
BfoI RGCGCY 2 cut(s) 605, 4143
BfrI CTTAAG 2 cut(s) 3344, 4130
BfuAI ACCTGC 2 cut(s) 763, 3769
BfuI GTATCC 3 cut(s) 1411, 2253, 3765
BglI GCCNNNNNGGC 1 cut(s) 3107
BglII AGATCT 4 cut(s) 54, 1104, 1464, 2211
BmcAI AGTACT 2 cut(s) 1216, 2386
Bme18I GGWCC 2 cut(s) 691, 3863
BmeRI GACNNNNNGTC 1 cut(s) 1135
BmeT110I CYCGRG 2 cut(s) 3417, 3600
BmgT120I GGNCC 5 cut(s) 691, 1069, 1863, 3109, 3863
BmiI GGNNCC 7 cut(s) 486, 693, 1830, 2509, 2704, 3057, 3231
BmrI ACTGGG 3 cut(s) 1227, 2553, 2768
BmuI ACTGGG 3 cut(s) 1227, 2553, 2768
BpiI GAAGAC 1 cut(s) 2469
BplI GAGNNNNNCTC 2 cut(s) 1300, 1332
BpmI CTGGAG 5 cut(s) 533, 2298, 2689, 2772, 3378
Bpu10I CCTNAGC 3 cut(s) 963, 1374, 3024
Bpu14I TTCGAA 1 cut(s) 4145
BpuMI CCSGG 2 cut(s) 2629, 2874
BsaAI YACGTR 2 cut(s) 1117, 2933
BsaHI GRCGYC 1 cut(s) 2923
BsaI GGTCTC 1 cut(s) 3478
BsaWI WCCGGW 3 cut(s) 286, 2233, 3718
BsaXI ACNNNNNCTCC 4 cut(s) 863, 893, 2617, 2647
Bse118I RCCGGY 1 cut(s) 2233
Bse1I ACTGG 9 cut(s) 550, 792, 1222, 1326, 2315, 2548, 2774, 2987, 3361
BseBI CCWGG 9 cut(s) 1037, 1245, 2907, 3113, 3266, 3293, 3470, 3590, 3746
BseNI ACTGG 9 cut(s) 550, 792, 1222, 1326, 2315, 2548, 2774, 2987, 3361
BseSI GKGCMC 1 cut(s) 4013
BseXI GCAGC 8 cut(s) 71, 1178, 1804, 1907, 2145, 2237, 2524, 3524
BseYI CCCAGC 2 cut(s) 1363, 1404
BsgI GTGCAG 3 cut(s) 402, 1626, 2258
Bsh1236I CGCG 3 cut(s) 268, 2605, 3657
BshNI GGYRCC 1 cut(s) 1828
BshTI ACCGGT 1 cut(s) 2233
BsiHKAI GWGCWC 3 cut(s) 294, 2314, 2824
BsiHKCI CYCGRG 2 cut(s) 3417, 3600
BsiSI CCGG 6 cut(s) 287, 2234, 2629, 2873, 3107, 3719
BslFI GGGAC 2 cut(s) 1480, 3607
BsmAI GTCTC 4 cut(s) 2477, 3077, 3478, 3644
BsmFI GGGAC 2 cut(s) 1480, 3607
BsmI GAATGC 1 cut(s) 2192
Bso31I GGTCTC 1 cut(s) 3478
BsoBI CYCGRG 2 cut(s) 3417, 3600
Bsp119I TTCGAA 1 cut(s) 4145
Bsp1286I GDGCHC 6 cut(s) 294, 2314, 2512, 2824, 3608, 4013
Bsp1407I TGTACA 1 cut(s) 3832
BspFNI CGCG 3 cut(s) 268, 2605, 3657
BspLI GGNNCC 7 cut(s) 486, 693, 1830, 2509, 2704, 3057, 3231
BspMAI CTGCAG 1 cut(s) 3514
BspMI ACCTGC 2 cut(s) 763, 3769
BspPI GGATC 6 cut(s) 301, 603, 991, 3973, 3992, 4171
BspT104I TTCGAA 1 cut(s) 4145
BspT107I GGYRCC 1 cut(s) 1828
BspTI CTTAAG 2 cut(s) 3344, 4130
BspTNI GGTCTC 1 cut(s) 3478
BsrBI CCGCTC 2 cut(s) 3002, 3104
BsrFI RCCGGY 1 cut(s) 2233
BsrGI TGTACA 1 cut(s) 3832
BsrI ACTGG 9 cut(s) 550, 792, 1222, 1326, 2315, 2548, 2774, 2987, 3361
BssAI RCCGGY 1 cut(s) 2233
BssNI GRCGYC 1 cut(s) 2923
BssT1I CCWWGG 3 cut(s) 576, 609, 3051
Bst2UI CCWGG 9 cut(s) 1037, 1245, 2907, 3113, 3266, 3293, 3470, 3590, 3746
Bst6I CTCTTC 8 cut(s) 53, 1280, 2409, 2475, 2739, 3039, 3469, 3513
BstACI GRCGYC 1 cut(s) 2923
BstAFI CTTAAG 2 cut(s) 3344, 4130
BstAPI GCANNNNNTGC 2 cut(s) 1050, 2431
BstAUI TGTACA 1 cut(s) 3832
BstBAI YACGTR 2 cut(s) 1117, 2933
BstBI TTCGAA 1 cut(s) 4145
BstDSI CCRYGG 2 cut(s) 266, 1208
BstEII GGTNACC 1 cut(s) 2876
BstENI CCTNNNNNAGG 1 cut(s) 1306
BstFNI CGCG 3 cut(s) 268, 2605, 3657
BstH2I RGCGCY 2 cut(s) 605, 4143
BstHHI GCGC 4 cut(s) 15, 604, 3659, 4142
BstMAI GTCTC 4 cut(s) 2477, 3077, 3478, 3644
BstMWI GCNNNNNNNGC 6 cut(s) 370, 1050, 2318, 2431, 2828, 3107
BstNI CCWGG 9 cut(s) 1037, 1245, 2907, 3113, 3266, 3293, 3470, 3590, 3746
BstNSI RCATGY 4 cut(s) 952, 1048, 1291, 3073
BstPI GGTNACC 1 cut(s) 2876
BstSFI CTRYAG 1 cut(s) 3510
BstSLI GKGCMC 1 cut(s) 4013
BstSNI TACGTA 1 cut(s) 2933
BstUI CGCG 3 cut(s) 268, 2605, 3657
BstV1I GCAGC 8 cut(s) 71, 1178, 1804, 1907, 2145, 2237, 2524, 3524
BstV2I GAAGAC 1 cut(s) 2469
BstX2I RGATCY 6 cut(s) 54, 996, 1104, 1464, 2211, 3997
BstXI CCANNNNNNTGG 1 cut(s) 1036
BstYI RGATCY 6 cut(s) 54, 996, 1104, 1464, 2211, 3997
BsuI GTATCC 3 cut(s) 1411, 2253, 3765
BtgI CCRYGG 2 cut(s) 266, 1208
BtsI GCAGTG 2 cut(s) 373, 1677
BveI ACCTGC 2 cut(s) 763, 3769
CaiI CAGNNNCTG 1 cut(s) 2158
CfoI GCGC 4 cut(s) 15, 604, 3659, 4142
Cfr10I RCCGGY 1 cut(s) 2233
Cfr13I GGNCC 5 cut(s) 691, 1069, 1863, 3109, 3863
Cfr42I CCGCGG 1 cut(s) 269
CpoI CGGWCCG 1 cut(s) 3863
CseI GACGC 3 cut(s) 607, 2931, 3980
CsiI ACCWGGT 1 cut(s) 3291
CspAI ACCGGT 1 cut(s) 2233
CspI CGGWCCG 1 cut(s) 3863
DriI GACNNNNNGTC 1 cut(s) 1135
EaeI YGGCCR 3 cut(s) 222, 2037, 3099
Eam1104I CTCTTC 8 cut(s) 53, 1280, 2409, 2475, 2739, 3039, 3469, 3513
Eam1105I GACNNNNNGTC 1 cut(s) 1135
EarI CTCTTC 8 cut(s) 53, 1280, 2409, 2475, 2739, 3039, 3469, 3513
EciI GGCGGA 3 cut(s) 2703, 2797, 3806
Ecl136II GAGCTC 1 cut(s) 2822
Eco105I TACGTA 1 cut(s) 2933
Eco130I CCWWGG 3 cut(s) 576, 609, 3051
Eco24I GRGCYC 3 cut(s) 2512, 2824, 3608
Eco31I GGTCTC 1 cut(s) 3478
Eco32I GATATC 1 cut(s) 3870
Eco47I GGWCC 2 cut(s) 691, 3863
Eco47III AGCGCT 1 cut(s) 603
Eco53kI GAGCTC 1 cut(s) 2822
Eco57I CTGAAG 8 cut(s) 970, 1532, 1631, 2105, 2481, 2499, 2990, 3936
Eco88I CYCGRG 2 cut(s) 3417, 3600
Eco91I GGTNACC 1 cut(s) 2876
EcoICRI GAGCTC 1 cut(s) 2822
EcoNI CCTNNNNNAGG 1 cut(s) 1306
EcoO109I RGGNCCY 2 cut(s) 691, 1069
EcoO65I GGTNACC 1 cut(s) 2876
EcoRI GAATTC 1 cut(s) 3529
EcoRII CCWGG 9 cut(s) 1035, 1243, 2905, 3111, 3264, 3291, 3468, 3588, 3744
EcoRV GATATC 1 cut(s) 3870
EcoT14I CCWWGG 3 cut(s) 576, 609, 3051
EcoT38I GRGCYC 3 cut(s) 2512, 2824, 3608
ErhI CCWWGG 3 cut(s) 576, 609, 3051
FalI AAGNNNNNCTT 2 cut(s) 2676, 2708
FaqI GGGAC 2 cut(s) 1480, 3607
FauI CCCGC 2 cut(s) 273, 4009
FauNDI CATATG 1 cut(s) 1488
FblI GTMKAC 1 cut(s) 3969
FriOI GRGCYC 3 cut(s) 2512, 2824, 3608
FspBI CTAG 3 cut(s) 299, 2526, 3728
FspI TGCGCA 1 cut(s) 14
GlaI GCGC 4 cut(s) 14, 603, 3658, 4141
GsaI CCCAGC 2 cut(s) 1367, 1408
GsuI CTGGAG 5 cut(s) 533, 2298, 2689, 2772, 3378
HaeII RGCGCY 2 cut(s) 605, 4143
HapII CCGG 6 cut(s) 287, 2234, 2629, 2873, 3107, 3719
HgaI GACGC 3 cut(s) 607, 2931, 3980
HhaI GCGC 4 cut(s) 15, 604, 3659, 4142
Hin1I GRCGYC 1 cut(s) 2923
Hin6I GCGC 4 cut(s) 13, 602, 3657, 4140
HinP1I GCGC 4 cut(s) 13, 602, 3657, 4140
HincII GTYRAC 6 cut(s) 149, 1605, 1704, 1881, 3289, 3709
HindII GTYRAC 6 cut(s) 149, 1605, 1704, 1881, 3289, 3709
HindIII AAGCTT 3 cut(s) 1869, 3013, 4127
HpaII CCGG 6 cut(s) 287, 2234, 2629, 2873, 3107, 3719
HphI GGTGA 8 cut(s) 504, 833, 1296, 1403, 2223, 2322, 3235, 3932
HpyCH4IV ACGT 7 cut(s) 72, 382, 461, 865, 1116, 2932, 4191
HpyF10VI GCNNNNNNNGC 6 cut(s) 370, 1050, 2318, 2431, 2828, 3107
HpySE526I ACGT 7 cut(s) 72, 382, 461, 865, 1116, 2932, 4191
Hsp92I GRCGYC 1 cut(s) 2923
HspAI GCGC 4 cut(s) 13, 602, 3657, 4140
KpnI GGTACC 1 cut(s) 1832
KspI CCGCGG 1 cut(s) 269
Lsp1109I GCAGC 8 cut(s) 71, 1178, 1804, 1907, 2145, 2237, 2524, 3524
MabI ACCWGGT 1 cut(s) 3291
MaeI CTAG 3 cut(s) 299, 2526, 3728
MaeII ACGT 7 cut(s) 72, 382, 461, 865, 1116, 2932, 4191
MaeIII GTNAC 5 cut(s) 556, 1021, 2580, 2876, 4027
MbiI CCGCTC 2 cut(s) 3002, 3104
MfeI CAATTG 1 cut(s) 3776
MflI RGATCY 6 cut(s) 54, 996, 1104, 1464, 2211, 3997
MhlI GDGCHC 6 cut(s) 294, 2314, 2512, 2824, 3608, 4013
MlsI TGGCCA 1 cut(s) 224
MluNI TGGCCA 1 cut(s) 224
MlyI GAGTC 5 cut(s) 39, 1220, 3079, 3646, 3670
MmeI TCCRAC 5 cut(s) 444, 2663, 2672, 2693, 3606
Mox20I TGGCCA 1 cut(s) 224
MroXI GAANNNNTTC 1 cut(s) 972
MscI TGGCCA 1 cut(s) 224
MslI CAYNNNNRTG 3 cut(s) 201, 923, 2546
Msp20I TGGCCA 1 cut(s) 224
MspA1I CMGCKG 2 cut(s) 268, 2537
MspCI CTTAAG 2 cut(s) 3344, 4130
MspI CCGG 6 cut(s) 287, 2234, 2629, 2873, 3107, 3719
MunI CAATTG 1 cut(s) 3776
Mva1269I GAATGC 1 cut(s) 2192
MvaI CCWGG 9 cut(s) 1037, 1245, 2907, 3113, 3266, 3293, 3470, 3590, 3746
MvnI CGCG 3 cut(s) 268, 2605, 3657
MwoI GCNNNNNNNGC 6 cut(s) 370, 1050, 2318, 2431, 2828, 3107
NciI CCSGG 2 cut(s) 2629, 2874
NdeI CATATG 1 cut(s) 1488
NlaIV GGNNCC 7 cut(s) 486, 693, 1830, 2509, 2704, 3057, 3231
NmuCI GTSAC 2 cut(s) 556, 1021
NsbI TGCGCA 1 cut(s) 14
NspI RCATGY 4 cut(s) 952, 1048, 1291, 3073
NspV TTCGAA 1 cut(s) 4145
PaeR7I CTCGAG 1 cut(s) 3417
PciI ACATGT 1 cut(s) 3069
PcsI WCGNNNNNNNCGW 3 cut(s) 57, 2929, 4165
PctI GAATGC 1 cut(s) 2192
PdmI GAANNNNTTC 1 cut(s) 972
PfoI TCCNGGA 1 cut(s) 1243
PinAI ACCGGT 1 cut(s) 2233
PleI GAGTC 5 cut(s) 39, 1220, 3079, 3646, 3670
PpsI GAGTC 5 cut(s) 39, 1220, 3079, 3646, 3670
Ppu21I YACGTR 2 cut(s) 1117, 2933
PpuMI RGGWCCY 1 cut(s) 691
PscI ACATGT 1 cut(s) 3069
PshBI ATTAAT 1 cut(s) 804
Psp124BI GAGCTC 1 cut(s) 2824
Psp5II RGGWCCY 1 cut(s) 691
Psp6I CCWGG 9 cut(s) 1035, 1243, 2905, 3111, 3264, 3291, 3468, 3588, 3744
PspEI GGTNACC 1 cut(s) 2876
PspFI CCCAGC 2 cut(s) 1363, 1404
PspGI CCWGG 9 cut(s) 1035, 1243, 2905, 3111, 3264, 3291, 3468, 3588, 3744
PspN4I GGNNCC 7 cut(s) 486, 693, 1830, 2509, 2704, 3057, 3231
PspPI GGNCC 5 cut(s) 691, 1069, 1863, 3109, 3863
PspPPI RGGWCCY 1 cut(s) 691
PspXI VCTCGAGB 1 cut(s) 3417
PsrI GAACNNNNNNTAC 4 cut(s) 2848, 2880, 2926, 2958
PstI CTGCAG 1 cut(s) 3514
PstNI CAGNNNCTG 1 cut(s) 2158
PsuI RGATCY 6 cut(s) 54, 996, 1104, 1464, 2211, 3997
PvuII CAGCTG 1 cut(s) 2537
RseI CAYNNNNRTG 3 cut(s) 201, 923, 2546
Rsr2I CGGWCCG 1 cut(s) 3863
RsrII CGGWCCG 1 cut(s) 3863
SacI GAGCTC 1 cut(s) 2824
SacII CCGCGG 1 cut(s) 269
Sau96I GGNCC 5 cut(s) 691, 1069, 1863, 3109, 3863
ScaI AGTACT 2 cut(s) 1216, 2386
SchI GAGTC 5 cut(s) 39, 1220, 3079, 3646, 3670
SduI GDGCHC 6 cut(s) 294, 2314, 2512, 2824, 3608, 4013
SexAI ACCWGGT 1 cut(s) 3291
SfcI CTRYAG 1 cut(s) 3510
SfiI GGCCNNNNNGGCC 1 cut(s) 3107
Sfr274I CTCGAG 1 cut(s) 3417
Sfr303I CCGCGG 1 cut(s) 269
SfuI TTCGAA 1 cut(s) 4145
SgrAI CRCCGGYG 1 cut(s) 2233
SgrBI CCGCGG 1 cut(s) 269
SinI GGWCC 2 cut(s) 691, 3863
SlaI CTCGAG 1 cut(s) 3417
SmiMI CAYNNNNRTG 3 cut(s) 201, 923, 2546
SnaBI TACGTA 1 cut(s) 2933
SpeI ACTAGT 1 cut(s) 2525
SspI AATATT 1 cut(s) 1177
SspMI CTAG 3 cut(s) 299, 2526, 3728
SstI GAGCTC 1 cut(s) 2824
StyI CCWWGG 3 cut(s) 576, 609, 3051
TaiI ACGT 7 cut(s) 75, 385, 464, 868, 1119, 2935, 4194
TaqI TCGA 6 cut(s) 51, 598, 834, 2139, 3418, 4145
TatI WGTACW 4 cut(s) 1214, 2384, 3169, 3832
TauI GCSGC 8 cut(s) 37, 271, 2164, 2437, 2719, 3104, 3137, 4115
TseFI GTSAC 2 cut(s) 556, 1021
Tsp45I GTSAC 2 cut(s) 556, 1021
TspGWI ACGGA 6 cut(s) 872, 1225, 3222, 3676, 3872, 3896
Vha464I CTTAAG 2 cut(s) 3344, 4130
VpaK11BI GGWCC 2 cut(s) 691, 3863
VspI ATTAAT 1 cut(s) 804
XagI CCTNNNNNAGG 1 cut(s) 1306
XapI RAATTY 3 cut(s) 3529, 3782, 3878
XbaI TCTAGA 1 cut(s) 3727
XceI RCATGY 4 cut(s) 952, 1048, 1291, 3073
XhoI CTCGAG 1 cut(s) 3417
XmiI GTMKAC 1 cut(s) 3969
XmnI GAANNNNTTC 1 cut(s) 972
XspI CTAG 3 cut(s) 299, 2526, 3728
ZrmI AGTACT 2 cut(s) 1216, 2386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.