RchiOBHm_Chr2g0085801

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
1076396 .. 1084368
7973 bp
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UTR
Exon/CDS
Intron
PRQ46133

Sequence Viewer

Length: 3552 bp
ATGGCGTTGTTGCGCAAATTGTTCTATCGCAAACCGCCGGATGGACTATTCGAGATCTGTGAGCGAGTATACGTTTTTGATTGCTGCTTCACTACCGATGCTTGGAAGGAGGAAAACTATAAGGTTTACATAGGTGGGGCAGTTGGTCAACTACAAGAGCACTTACCTGATGCTTCATTCTTGGTCTTCAATTTTCATGATGGTATGGCACAGAGCCAGATGGCCGGCATCTTGTCTGAGTATGATATGACCATAATGGATTACCCTCGGCACTTTGAAGGTTGTCCTGTCCTGACGATGGAGTTGATCCATCACTTTCTTAGATCAAGTGAAAGCTGGTTAGGACTTGGGCACAACAACGTGCTTTTGATGCATTGTGAGCGTGGAGGTTGGCCTGTTTTGGCCTTCATGCTGGCTGCACTCTTGATTTACAGGAAGCATTATACTGGTGAGCATAGGACGTTGGACATGGTTTACAGGCAGGCTCCCCTTGAGCTTTTGCATTTGCTATCAGCCTTAAATCCAATTCCTTCTCAACTTAGGTATCTACAGTATGTATCGAGGAGGAATGTAGCCTTAGAATGGCCTCCTCTGGATCGAGCACTTACCTTGGACTGCGTCATTTTTAGATTTATTCCTAATTTTGATGGGCAAGGAGGTTGCCGTCCTATATTTCGCATATATGGGCAAGACCCTTTTCTTGTTACTGATCGAACTTCCAAAGTCTTATACTCGACTCCAAAACGAAGCAAAACCATCCGGGCTTACAAGCAGGCAGAATGTGAACTGGTTAAAATTGACATTAATTGCCATATTCAAGGTGATGTTGTGCTTGAATGCATTTGCTTGCATGATGATATGGAACGTGAACAGATGATGTTCCGCGTCATGTTCAATACAGCTTTTATTAGGTCTAACATTTTGATGCTCAACCGTGATGAAATAGACATGTTGTGGGATGTAAAGGAACAATTTCCGAAGGACTTTAGAGTAGAGATCCTTTTCTCAGAGATGGATGCTGTCTCATCTATTATTCTTGGTGGTATGTCATGCTTTGAGGATAAGGAGGGACTTCCGATGGAAGCATTTGATCAAGTTCAAGAGATCTTTAGTTATGTTGATTGGTTAGATCCCAAAACAGATGCTGCATTGAATGTTCTTCAACAGTTAGGTGCATCGAATATCACCCATGAAAAGTTGGATACTGACTCTTCCCAGAATGATGGAAAAGAAAATATAATGCAGGAAACAATTCCTAAACACATATCAAATATAAAGACATCCTTGAATTTGGAAAACGATTCTAAGATTCTATCCTCCTTGGAGGTGCAGTCAGTGGCCTCACCAGATACAAGTGTCAATAAACAGGAAGCTAAACCTCAAGATGTTCAGCGACCCAATCAATGTGATTCAGTGAGCCAGCACATGCCACAACCTCCTCAGTCAGAGCCAATGAAGGCATTTGCTCAAGTTCAGGAGATCATTAGCCGATTGCCCTCAACTACGCAATCTCCAGATAGCACTGTGACTAAACCTGAAGCCAAAGAAGACATTCATACTGCACAGCAGCCACCTAACCAATCTGATTCAGTGTCCCAGCAGAGGCCCCAACCCCCTTTGTTAACACCAATGGAAGCATTCATTCAAGTTCAAGATATCTTCAGCCGTGTAGCCTCACCTAAAAAATCTCAAGATACCACTGTGAATAAACAGGAAGCTATACCTCAAGATACTTATACTGCATCTCAGCCACTTATTCCCCAACCTTCTAAGTCAATCCCAGTTTCCTCTGGAGCCCAAAGTGTTTCAGTTGCACCACCAACACCTCCACCAGCTTCTCCATTGCAACCTACTTCTGCTATTACAACTCCTCCTCCTCCTCCATCACCTCCACTCCAACCTCAACATACATCACTTCCAAAGCCCAAAGATGCACTTTCCAAAGATACTGAAACCCAACCATCTAGCCCTGGGAGGATACCACCCTCCTCTTCTCCAGTTTCTAAAGTTACTTCATCATCTCAGCCTCCTCCACTACCTCCTCCTCCTTCAACTCCTCCTCTGAAAGAGAACCTTGCTGCTAGTTCTAGACCTCCCCACCTCCACCACCTCCTCTTCCCTCAGGCCAAGCTGGAAGCACTGCAAATGCATCTCCAGTTCCAGTGTCACCAGCACCACCTAGTGCACCCCCTCCTCCTCCTCCTCCACTCTCAGGGAAATCTGGAGCCTGGAACTCCTCCACCACCACCAGTTGGTTCCGCCAGTAATGCAAAAGGCCGTCTATCACGTACCATAAGTTCTAAGGATAATCAAAAGAAACTGAAGCCATTACACTGGTTGAAACTATCAAGAGCAGTTCAGGGAAGTTTATGGGCTGAGGCCGAAAAATCCAGTGAGGACACGAAGGCTCCAGAGATTGACATGTCAGAGCTTGAGAATCTTTTCGCTGCGGCAGTTCCAACTTCAGATCAGGGCAAGAAAGGAACTACACCAGGTCCAGTTGCCCCTAAATCTGACAAAGTGCAATTGATTGACCACAGACGGGCGTACAATTGTGAAATCATGCTTTCAAAGGTGAAGGTTCCCTTGCATGAGTTAACGAATTCGGTGCTTGCCCTGGAAAATACAGCATTAGATCCTGACCAGGTCGAGAACTTAATAAAGTTTTGTCCAACTAAAGAGGAGATGGAGCTACTTAAGGGATATAAGGGAGAGAAGGAGAAGTTAGGAAAATGTGAACAGTTCTTGTTAGAGTTAATGAAAGTACCTCGAGTGGAATCTAAGCTCAGAGTTTTTTCGTTCAAAATACAATTCTCTTCCCAGGTTTCTGACCTTAGGAAAAGCCTGAATGTTGTAAACTCTGCAGTAGAAGAGATCAGAAATTCAGGCAAATTGAAAAGAGTTATGCAGACAATTCTTTCCTTAGGAAATGCTTTGAACCAGGGGACAGCTCGGGGCGCGGCTATCGGATTTAGATTGGATAGTCTTCTTAAACTCATTGACACTCGTGCAAGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTTCTTGCTGACCAACTACCAGCGGTTCTAGATTTCTCAAAGGACCTATCCAGCTTAGAGCCTGCATCAAAGATACAATTGAAATTTTTGGCAGAGGAAATGCAAGCAGTAAGTAAAGGACTGGAGAAAGTTGTACAGGAATTATCTACTTCTGAAAATGACGGTCCTATATCACAAAATTTCCGTAAGACCCTAAAGGAGTTCCTCCGTTCCGCTGAAGCCGAGGTGAGATCTTTGGCTTTACTATATTCTAGCGTGGGTAGAAATGTAGATGCATTGATTCTTTATTTTGGAGAAGATCCTGCAAAATGCCCGTTTGAACAAGTTATTTCAACCTTACTCAACTTTGTCAGAATGTTCATCAAGTCCCATGACGAAAATTGCAAGCAAAGTGAACTTGAAATGAAAAAAGCAGCAGAAAGTGAGAAGGTCAAGATGGGTGCTTCCAATCAGTCAGAACGGGTGTTGCGTACTCCAATCCATAATAGCAATGTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1183

Amino Acids

132.45

Weight (kDa)

6.44

Isoelectric Point (pI)

53.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 199 - 337 3.4e-40 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 768 - 1137 3.1e-119 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 14
AccB7I CCANNNNNTGG 1 cut(s) 2252
AccI GTMKAC 1 cut(s) 69
AccII CGCG 2 cut(s) 885, 2960
AciI CCGC 7 cut(s) 35, 883, 2259, 2450, 2960, 3074, 3264
AclWI GGATC 6 cut(s) 301, 603, 991, 1124, 2630, 3344
AcoI YGGCCR 1 cut(s) 222
AcsI RAATTY 5 cut(s) 1288, 2602, 2881, 3134, 3229
AcuI CTGAAG 5 cut(s) 1557, 1645, 2342, 2448, 3288
AdeI CACNNNGTG 1 cut(s) 2182
AfaI GTAC 5 cut(s) 2290, 2549, 2766, 3186, 3523
AfiI CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2212, 2252, 2542
AflII CTTAAG 1 cut(s) 2696
AflIII ACRYGT 2 cut(s) 948, 2421
AjnI CCWGG 7 cut(s) 1969, 2227, 2491, 2616, 2643, 2820, 2940
Alw21I GWGCWC 3 cut(s) 162, 604, 2187
Alw26I GTCTC 1 cut(s) 1027
Alw44I GTGCAC 1 cut(s) 2183
AlwI GGATC 6 cut(s) 301, 603, 991, 1124, 2630, 3344
AlwNI CAGNNNCTG 1 cut(s) 1145
Ama87I CYCGRG 2 cut(s) 2769, 2952
AoxI GGCC 9 cut(s) 222, 392, 402, 584, 1338, 1604, 2124, 2275, 2379
ApaLI GTGCAC 1 cut(s) 2183
ApeKI GCWGC 7 cut(s) 84, 416, 1145, 1567, 2078, 2447, 3464
ApoI RAATTY 5 cut(s) 1288, 2602, 2881, 3134, 3229
AseI ATTAAT 1 cut(s) 804
Asp700I GAANNNNTTC 4 cut(s) 972, 1251, 1551, 2441
AspLEI GCGC 2 cut(s) 15, 2960
AspS9I GGNCC 4 cut(s) 1605, 2495, 3094, 3215
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 9 cut(s) 461, 833, 1177, 1335, 1668, 1878, 2159, 2587, 3289
AvaI CYCGRG 2 cut(s) 2769, 2952
AvaII GGWCC 3 cut(s) 2495, 3094, 3215
AxyI CCTNAGG 3 cut(s) 2121, 2834, 2923
BaeGI GKGCMC 2 cut(s) 354, 2187
BaeI ACNNNNGTAYC 6 cut(s) 527, 560, 1341, 1374, 1686, 1719
BanII GRGCYC 1 cut(s) 1798
BauI CACGAG 1 cut(s) 3006
BbsI GAAGAC 3 cut(s) 178, 1554, 2978
Bbv12I GWGCWC 3 cut(s) 162, 604, 2187
BbvCI CCTCAGC 1 cut(s) 2376
BbvI GCAGC 7 cut(s) 71, 403, 1132, 1579, 2065, 2434, 3476
BceAI ACGGC 3 cut(s) 648, 1650, 2262
BcgI CGANNNNNNTGC 2 cut(s) 2590, 2624
BciT130I CCWGG 7 cut(s) 1971, 2229, 2493, 2618, 2645, 2822, 2942
BciVI GTATCC 2 cut(s) 1195, 1971
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 1 cut(s) 1027
BfaI CTAG 6 cut(s) 1965, 2082, 2088, 2180, 3080, 3303
BfmI CTRYAG 2 cut(s) 548, 2862
BfrI CTTAAG 1 cut(s) 2696
BfuI GTATCC 2 cut(s) 1195, 1971
BglII AGATCT 3 cut(s) 54, 1104, 3281
BisI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2079, 2448, 2451, 2961, 3465
BlsI GCNGC 9 cut(s) 86, 418, 1147, 1569, 2080, 2449, 2452, 2962, 3466
Bme1390I CCNGG 8 cut(s) 761, 1971, 2229, 2493, 2618, 2645, 2822, 2942
Bme18I GGWCC 3 cut(s) 2495, 3094, 3215
BmeT110I CYCGRG 2 cut(s) 2769, 2952
BmgT120I GGNCC 4 cut(s) 1605, 2495, 3094, 3215
BmiI GGNNCC 7 cut(s) 486, 1607, 1795, 2226, 2257, 2409, 2583
BmrFI CCNGG 8 cut(s) 761, 1971, 2229, 2493, 2618, 2645, 2822, 2942
BmrI ACTGGG 1 cut(s) 1775
BmuI ACTGGG 1 cut(s) 1775
BpiI GAAGAC 3 cut(s) 178, 1554, 2978
BpmI CTGGAG 7 cut(s) 1497, 1812, 1980, 2138, 2243, 2394, 3194
Bpu10I CCTNAGC 1 cut(s) 2376
BpuEI CTTGAG 6 cut(s) 512, 1365, 1452, 1674, 1710, 2453
BpuMI CCSGG 1 cut(s) 761
BsaAI YACGTR 1 cut(s) 2288
BsaJI CCNNGG 9 cut(s) 266, 609, 1320, 1969, 1970, 2616, 2820, 2941, 3273
Bsc4I CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2212, 2252, 2542
Bse118I RCCGGY 1 cut(s) 224
Bse21I CCTNAGG 3 cut(s) 2121, 2834, 2923
Bse3DI GCAATG 2 cut(s) 1841, 3547
BseBI CCWGG 7 cut(s) 1971, 2229, 2493, 2618, 2645, 2822, 2942
BseDI CCNNGG 9 cut(s) 266, 609, 1320, 1969, 1970, 2616, 2820, 2941, 3273
BseGI GGATG 5 cut(s) 46, 756, 964, 1021, 1280
BseLI CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2212, 2252, 2542
BseMI GCAATG 2 cut(s) 1841, 3547
BseMII CTCAG 9 cut(s) 228, 1020, 1454, 1760, 2036, 2135, 2225, 2367, 2800
BseSI GKGCMC 2 cut(s) 354, 2187
BseXI GCAGC 7 cut(s) 71, 403, 1132, 1579, 2065, 2434, 3476
BseYI CCCAGC 1 cut(s) 1596
BsgI GTGCAG 3 cut(s) 402, 1349, 1545
Bsh1236I CGCG 2 cut(s) 885, 2960
BshFI GGCC 9 cut(s) 224, 394, 404, 586, 1340, 1606, 2126, 2277, 2381
BsiHKAI GWGCWC 3 cut(s) 162, 604, 2187
BsiHKCI CYCGRG 2 cut(s) 2769, 2952
BsiSI CCGG 3 cut(s) 38, 225, 760
BslFI GGGAC 4 cut(s) 1083, 1579, 2959, 3403
BslI CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2212, 2252, 2542
BsmAI GTCTC 1 cut(s) 1027
BsmFI GGGAC 4 cut(s) 1083, 1579, 2959, 3403
BsmI GAATGC 2 cut(s) 842, 1637
BsnI GGCC 9 cut(s) 224, 394, 404, 586, 1340, 1606, 2126, 2277, 2381
BsoBI CYCGRG 2 cut(s) 2769, 2952
Bsp1286I GDGCHC 5 cut(s) 162, 354, 604, 1798, 2187
Bsp1407I TGTACA 1 cut(s) 3184
BspACI CCGC 7 cut(s) 35, 883, 2259, 2450, 2960, 3074, 3264
BspANI GGCC 9 cut(s) 224, 394, 404, 586, 1340, 1606, 2126, 2277, 2381
BspCNI CTCAG 9 cut(s) 229, 1019, 1453, 1759, 2035, 2134, 2224, 2368, 2799
BspFNI CGCG 2 cut(s) 885, 2960
BspHI TCATGA 1 cut(s) 196
BspLI GGNNCC 7 cut(s) 486, 1607, 1795, 2226, 2257, 2409, 2583
BspMAI CTGCAG 1 cut(s) 2866
BspPI GGATC 6 cut(s) 301, 603, 991, 1124, 2630, 3344
BspTI CTTAAG 1 cut(s) 2696
BsrDI GCAATG 2 cut(s) 1841, 3547
BsrFI RCCGGY 1 cut(s) 224
BsrGI TGTACA 1 cut(s) 3184
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 9 cut(s) 266, 609, 1320, 1969, 1970, 2616, 2820, 2941, 3273
BssNAI GTATAC 1 cut(s) 70
BssSI CACGAG 1 cut(s) 3006
BssT1I CCWWGG 2 cut(s) 609, 1320
Bst1107I GTATAC 1 cut(s) 70
Bst2BI CACGAG 1 cut(s) 3006
Bst2UI CCWGG 7 cut(s) 1971, 2229, 2493, 2618, 2645, 2822, 2942
Bst4CI ACNGT 7 cut(s) 552, 935, 1167, 1525, 1702, 2742, 3215
Bst6I CTCTTC 5 cut(s) 1216, 1996, 2120, 2821, 2865
BstAFI CTTAAG 1 cut(s) 2696
BstAUI TGTACA 1 cut(s) 3184
BstBAI YACGTR 1 cut(s) 2288
BstF5I GGATG 5 cut(s) 46, 756, 964, 1021, 1280
BstFNI CGCG 2 cut(s) 885, 2960
BstHHI GCGC 2 cut(s) 15, 2960
BstMAI GTCTC 1 cut(s) 1027
BstMWI GCNNNNNNNGC 4 cut(s) 370, 379, 2267, 2957
BstNI CCWGG 7 cut(s) 1971, 2229, 2493, 2618, 2645, 2822, 2942
BstNSI RCATGY 3 cut(s) 952, 1429, 2425
BstSCI CCNGG 8 cut(s) 759, 1969, 2227, 2491, 2616, 2643, 2820, 2940
BstSFI CTRYAG 2 cut(s) 548, 2862
BstSLI GKGCMC 2 cut(s) 354, 2187
BstUI CGCG 2 cut(s) 885, 2960
BstV1I GCAGC 7 cut(s) 71, 403, 1132, 1579, 2065, 2434, 3476
BstV2I GAAGAC 3 cut(s) 178, 1554, 2978
BstX2I RGATCY 7 cut(s) 54, 996, 1104, 1129, 2635, 3281, 3349
BstXI CCANNNNNNTGG 2 cut(s) 1223, 2334
BstYI RGATCY 7 cut(s) 54, 996, 1104, 1129, 2635, 3281, 3349
BstZ17I GTATAC 1 cut(s) 70
Bsu36I CCTNAGG 3 cut(s) 2121, 2834, 2923
BsuI GTATCC 2 cut(s) 1195, 1971
BsuRI GGCC 9 cut(s) 224, 394, 404, 586, 1340, 1606, 2126, 2277, 2381
BtsCI GGATG 5 cut(s) 46, 756, 964, 1021, 1280
BtsI GCAGTG 1 cut(s) 2138
BtsIMutI CAGTG 9 cut(s) 1341, 1419, 1521, 1596, 1698, 2138, 2168, 2332, 2398
CaiI CAGNNNCTG 1 cut(s) 1145
CciI TCATGA 1 cut(s) 196
CfoI GCGC 2 cut(s) 15, 2960
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 4 cut(s) 1605, 2495, 3094, 3215
CseI GACGC 2 cut(s) 607, 874
CsiI ACCWGGT 2 cut(s) 2491, 2643
Csp6I GTAC 5 cut(s) 2289, 2548, 2765, 3185, 3522
CviQI GTAC 5 cut(s) 2289, 2548, 2765, 3185, 3522
DraIII CACNNNGTG 1 cut(s) 2182
EaeI YGGCCR 1 cut(s) 222
Eam1104I CTCTTC 5 cut(s) 1216, 1996, 2120, 2821, 2865
EarI CTCTTC 5 cut(s) 1216, 1996, 2120, 2821, 2865
EciI GGCGGA 1 cut(s) 2248
Eco130I CCWWGG 2 cut(s) 609, 1320
Eco24I GRGCYC 1 cut(s) 1798
Eco32I GATATC 1 cut(s) 1657
Eco47I GGWCC 3 cut(s) 2495, 3094, 3215
Eco57I CTGAAG 5 cut(s) 1557, 1645, 2342, 2448, 3288
Eco81I CCTNAGG 3 cut(s) 2121, 2834, 2923
Eco88I CYCGRG 2 cut(s) 2769, 2952
EcoO109I RGGNCCY 2 cut(s) 1605, 3094
EcoRI GAATTC 1 cut(s) 2602
EcoRII CCWGG 7 cut(s) 1969, 2227, 2491, 2616, 2643, 2820, 2940
EcoRV GATATC 1 cut(s) 1657
EcoT14I CCWWGG 2 cut(s) 609, 1320
EcoT22I ATGCAT 5 cut(s) 375, 842, 2151, 3039, 3328
EcoT38I GRGCYC 1 cut(s) 1798
ErhI CCWWGG 2 cut(s) 609, 1320
FalI AAGNNNNNCTT 8 cut(s) 1268, 1300, 1920, 1952, 2058, 2090, 2570, 2602
FaqI GGGAC 4 cut(s) 1083, 1579, 2959, 3403
FbaI TGATCA 1 cut(s) 1090
FblI GTMKAC 1 cut(s) 69
Fnu4HI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2079, 2448, 2451, 2961, 3465
FokI GGATG 5 cut(s) 53, 743, 971, 1028, 1267
FriOI GRGCYC 1 cut(s) 1798
Fsp4HI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2079, 2448, 2451, 2961, 3465
FspBI CTAG 6 cut(s) 1965, 2082, 2088, 2180, 3080, 3303
FspI TGCGCA 1 cut(s) 14
GlaI GCGC 2 cut(s) 14, 2959
GluI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2079, 2448, 2451, 2961, 3465
GsaI CCCAGC 1 cut(s) 1600
GsuI CTGGAG 7 cut(s) 1497, 1812, 1980, 2138, 2243, 2394, 3194
HaeIII GGCC 9 cut(s) 224, 394, 404, 586, 1340, 1606, 2126, 2277, 2381
HapII CCGG 3 cut(s) 38, 225, 760
HgaI GACGC 2 cut(s) 607, 874
HhaI GCGC 2 cut(s) 15, 2960
Hin6I GCGC 2 cut(s) 13, 2958
HinP1I GCGC 2 cut(s) 13, 2958
HincII GTYRAC 3 cut(s) 149, 1623, 2598
HindII GTYRAC 3 cut(s) 149, 1623, 2598
HpaI GTTAAC 2 cut(s) 1623, 2598
HpaII CCGG 3 cut(s) 38, 225, 760
HphI GGTGA 9 cut(s) 461, 833, 1177, 1335, 1668, 1878, 2159, 2587, 3289
HpyCH4III ACNGT 7 cut(s) 552, 935, 1167, 1525, 1702, 2742, 3215
HpyCH4IV ACGT 5 cut(s) 72, 360, 461, 865, 2287
HpyF10VI GCNNNNNNNGC 4 cut(s) 370, 379, 2267, 2957
HpySE526I ACGT 5 cut(s) 72, 360, 461, 865, 2287
HspAI GCGC 2 cut(s) 13, 2958
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 1090
KspAI GTTAAC 2 cut(s) 1623, 2598
LmnI GCTCC 5 cut(s) 490, 1793, 2224, 2413, 2689
Lsp1109I GCAGC 7 cut(s) 71, 403, 1132, 1579, 2065, 2434, 3476
MabI ACCWGGT 2 cut(s) 2491, 2643
MaeI CTAG 6 cut(s) 1965, 2082, 2088, 2180, 3080, 3303
MaeII ACGT 5 cut(s) 72, 360, 461, 865, 2287
MaeIII GTNAC 4 cut(s) 703, 1525, 2008, 2165
MfeI CAATTG 3 cut(s) 2525, 2551, 3128
MflI RGATCY 7 cut(s) 54, 996, 1104, 1129, 2635, 3281, 3349
MhlI GDGCHC 5 cut(s) 162, 354, 604, 1798, 2187
MlyI GAGTC 3 cut(s) 730, 1202, 3022
MmeI TCCRAC 5 cut(s) 444, 1179, 1921, 2483, 2696
Mph1103I ATGCAT 5 cut(s) 375, 842, 2151, 3039, 3328
MroNI GCCGGC 1 cut(s) 224
MroXI GAANNNNTTC 4 cut(s) 972, 1251, 1551, 2441
MseI TTAA 9 cut(s) 518, 792, 804, 1622, 2597, 2657, 2697, 2756, 2991
MslI CAYNNNNRTG 1 cut(s) 923
MspA1I CMGCKG 2 cut(s) 3074, 3266
MspCI CTTAAG 1 cut(s) 2696
MspI CCGG 3 cut(s) 38, 225, 760
MspR9I CCNGG 8 cut(s) 761, 1971, 2229, 2493, 2618, 2645, 2822, 2942
MunI CAATTG 3 cut(s) 2525, 2551, 3128
Mva1269I GAATGC 2 cut(s) 842, 1637
MvaI CCWGG 7 cut(s) 1971, 2229, 2493, 2618, 2645, 2822, 2942
MvnI CGCG 2 cut(s) 885, 2960
MwoI GCNNNNNNNGC 4 cut(s) 370, 379, 2267, 2957
NaeI GCCGGC 1 cut(s) 226
NciI CCSGG 1 cut(s) 761
NgoMIV GCCGGC 1 cut(s) 224
NlaIV GGNNCC 7 cut(s) 486, 1607, 1795, 2226, 2257, 2409, 2583
NmeAIII GCCGAG 2 cut(s) 247, 3298
NmuCI GTSAC 2 cut(s) 1525, 2165
NsbI TGCGCA 1 cut(s) 14
NsiI ATGCAT 5 cut(s) 375, 842, 2151, 3039, 3328
NspI RCATGY 3 cut(s) 952, 1429, 2425
PaeR7I CTCGAG 1 cut(s) 2769
PagI TCATGA 1 cut(s) 196
PasI CCCWGGG 1 cut(s) 1970
PciI ACATGT 2 cut(s) 948, 2421
PcsI WCGNNNNNNNCGW 1 cut(s) 3517
PctI GAATGC 2 cut(s) 842, 1637
PdiI GCCGGC 1 cut(s) 226
PdmI GAANNNNTTC 4 cut(s) 972, 1251, 1551, 2441
PfeI GAWTC 7 cut(s) 1301, 1309, 1409, 1586, 2437, 2777, 3331
PflFI GACNNNGTC 2 cut(s) 617, 2645
PflMI CCANNNNNTGG 1 cut(s) 2252
PkrI GCNGC 9 cut(s) 86, 418, 1147, 1569, 2080, 2449, 2452, 2962, 3466
PleI GAGTC 3 cut(s) 730, 1202, 3022
PpsI GAGTC 3 cut(s) 730, 1202, 3022
Ppu21I YACGTR 1 cut(s) 2288
PpuMI RGGWCCY 1 cut(s) 3094
PscI ACATGT 2 cut(s) 948, 2421
PshBI ATTAAT 1 cut(s) 804
Psp5II RGGWCCY 1 cut(s) 3094
Psp6I CCWGG 7 cut(s) 1969, 2227, 2491, 2616, 2643, 2820, 2940
PspFI CCCAGC 1 cut(s) 1596
PspGI CCWGG 7 cut(s) 1969, 2227, 2491, 2616, 2643, 2820, 2940
PspN4I GGNNCC 7 cut(s) 486, 1607, 1795, 2226, 2257, 2409, 2583
PspPI GGNCC 4 cut(s) 1605, 2495, 3094, 3215
PspPPI RGGWCCY 1 cut(s) 3094
PspXI VCTCGAGB 1 cut(s) 2769
PsrI GAACNNNNNNTAC 2 cut(s) 2281, 2313
PstI CTGCAG 1 cut(s) 2866
PstNI CAGNNNCTG 1 cut(s) 1145
PsuI RGATCY 7 cut(s) 54, 996, 1104, 1129, 2635, 3281, 3349
PsyI GACNNNGTC 2 cut(s) 617, 2645
RsaI GTAC 5 cut(s) 2290, 2549, 2766, 3186, 3523
RsaNI GTAC 5 cut(s) 2289, 2548, 2765, 3185, 3522
RseI CAYNNNNRTG 1 cut(s) 923
SaqAI TTAA 9 cut(s) 518, 792, 804, 1622, 2597, 2657, 2697, 2756, 2991
SatI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2079, 2448, 2451, 2961, 3465
Sau96I GGNCC 4 cut(s) 1605, 2495, 3094, 3215
SchI GAGTC 3 cut(s) 730, 1202, 3022
ScrFI CCNGG 8 cut(s) 761, 1971, 2229, 2493, 2618, 2645, 2822, 2942
SduI GDGCHC 5 cut(s) 162, 354, 604, 1798, 2187
SexAI ACCWGGT 2 cut(s) 2491, 2643
SfcI CTRYAG 2 cut(s) 548, 2862
Sfr274I CTCGAG 1 cut(s) 2769
SinI GGWCC 3 cut(s) 2495, 3094, 3215
SlaI CTCGAG 1 cut(s) 2769
SmiMI CAYNNNNRTG 1 cut(s) 923
SmlI CTYRAG 8 cut(s) 491, 1380, 1467, 1689, 1725, 2432, 2696, 2769
SmoI CTYRAG 8 cut(s) 491, 1380, 1467, 1689, 1725, 2432, 2696, 2769
SsiI CCGC 7 cut(s) 35, 883, 2259, 2450, 2960, 3074, 3264
SspMI CTAG 6 cut(s) 1965, 2082, 2088, 2180, 3080, 3303
StyD4I CCNGG 8 cut(s) 759, 1969, 2227, 2491, 2616, 2643, 2820, 2940
StyI CCWWGG 2 cut(s) 609, 1320
TaaI ACNGT 7 cut(s) 552, 935, 1167, 1525, 1702, 2742, 3215
TaiI ACGT 5 cut(s) 75, 363, 464, 868, 2290
TaqI TCGA 8 cut(s) 51, 560, 598, 712, 734, 1178, 2649, 2770
TatI WGTACW 1 cut(s) 3184
TauI GCSGC 2 cut(s) 2453, 2963
TfiI GAWTC 7 cut(s) 1301, 1309, 1409, 1586, 2437, 2777, 3331
Tru1I TTAA 9 cut(s) 518, 792, 804, 1622, 2597, 2657, 2697, 2756, 2991
Tru9I TTAA 9 cut(s) 518, 792, 804, 1622, 2597, 2657, 2697, 2756, 2991
TscAI CASTG 9 cut(s) 1341, 1419, 1528, 1596, 1705, 2145, 2168, 2339, 2398
TseFI GTSAC 2 cut(s) 1525, 2165
TseI GCWGC 7 cut(s) 84, 416, 1145, 1567, 2078, 2447, 3464
Tsp45I GTSAC 2 cut(s) 1525, 2165
TspGWI ACGGA 2 cut(s) 3224, 3248
TspRI CASTG 9 cut(s) 1341, 1419, 1528, 1596, 1705, 2145, 2168, 2339, 2398
Tth111I GACNNNGTC 2 cut(s) 617, 2645
Van91I CCANNNNNTGG 1 cut(s) 2252
Vha464I CTTAAG 1 cut(s) 2696
VneI GTGCAC 1 cut(s) 2183
VpaK11BI GGWCC 3 cut(s) 2495, 3094, 3215
VspI ATTAAT 1 cut(s) 804
XapI RAATTY 5 cut(s) 1288, 2602, 2881, 3134, 3229
XbaI TCTAGA 2 cut(s) 2087, 3079
XceI RCATGY 3 cut(s) 952, 1429, 2425
XhoI CTCGAG 1 cut(s) 2769
XmiI GTMKAC 1 cut(s) 69
XmnI GAANNNNTTC 4 cut(s) 972, 1251, 1551, 2441
XspI CTAG 6 cut(s) 1965, 2082, 2088, 2180, 3080, 3303
Zsp2I ATGCAT 5 cut(s) 375, 842, 2151, 3039, 3328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.