RLG00000024951

Belongs to the formin-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0009514
Physical Location & Seq
Reverse (-)
40718306 .. 40719307
1002 bp
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UTR
Exon/CDS
Intron
RLM00000024951

Sequence Viewer

Length: 348 bp
ATGGCGCTGTTGCGCAAATTGTTCTATCGCAAACCGCCGGATGGACTGTTCGAGATCTGTGAGCGAGTATACGTTTTTGATTGCTGCTTCACTACCGATGCTTGGAAGGAGGAAAACTATAAGGTTTACATAGGTGGGGCAGTTGGTCAACTACAAGAGCACTTACCTGATGCTTCATTCTTGGTCTTCAATTTTCATGATGGTATGGCACAGAGCCAGATGGCCGGCATCTTGTCTGAGTATGATATGACCATAATGGATTACCCTCGGCACTTTGAAGGTTGTCCTGTCCTGACGATGGAGTTGATCCATCACTTTCAAAGTGCTGCTTTAGGATTAATATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FH2 PTEN_C2

Protein Analysis

116

Amino Acids

13.28

Weight (kDa)

5.0

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 14
AccI GTMKAC 1 cut(s) 69
AciI CCGC 1 cut(s) 35
AclWI GGATC 1 cut(s) 301
AcoI YGGCCR 1 cut(s) 222
AfiI CCNNNNNNNGG 3 cut(s) 41, 102, 298
AgsI TTSAA 3 cut(s) 190, 278, 320
AloI GAACNNNNNNTCC 2 cut(s) 32, 64
Alw21I GWGCWC 1 cut(s) 162
AlwI GGATC 1 cut(s) 301
AoxI GGCC 1 cut(s) 222
ApeKI GCWGC 2 cut(s) 84, 326
AseI ATTAAT 1 cut(s) 338
AspLEI GCGC 2 cut(s) 7, 15
BbsI GAAGAC 1 cut(s) 178
Bbv12I GWGCWC 1 cut(s) 162
BbvI GCAGC 2 cut(s) 71, 313
BccI CCATC 5 cut(s) 35, 194, 214, 292, 318
BfoI RGCGCY 1 cut(s) 8
BglII AGATCT 1 cut(s) 54
BisI GCNGC 2 cut(s) 85, 327
BlsI GCNGC 2 cut(s) 86, 328
BmsI GCATC 3 cut(s) 88, 160, 237
BpiI GAAGAC 1 cut(s) 178
BsaJI CCNNGG 1 cut(s) 266
Bsc4I CCNNNNNNNGG 3 cut(s) 41, 102, 298
Bse118I RCCGGY 1 cut(s) 224
BseDI CCNNGG 1 cut(s) 266
BseGI GGATG 1 cut(s) 46
BseLI CCNNNNNNNGG 3 cut(s) 41, 102, 298
BseMII CTCAG 1 cut(s) 228
BseXI GCAGC 2 cut(s) 71, 313
BshFI GGCC 1 cut(s) 224
BsiHKAI GWGCWC 1 cut(s) 162
BsiSI CCGG 2 cut(s) 38, 225
BslI CCNNNNNNNGG 3 cut(s) 41, 102, 298
BsnI GGCC 1 cut(s) 224
Bsp1286I GDGCHC 1 cut(s) 162
Bsp143I GATC 2 cut(s) 54, 306
BspACI CCGC 1 cut(s) 35
BspANI GGCC 1 cut(s) 224
BspCNI CTCAG 1 cut(s) 229
BspHI TCATGA 1 cut(s) 196
BspPI GGATC 1 cut(s) 301
BsrFI RCCGGY 1 cut(s) 224
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 1 cut(s) 266
BssMI GATC 2 cut(s) 54, 306
BssNAI GTATAC 1 cut(s) 70
Bst1107I GTATAC 1 cut(s) 70
Bst4CI ACNGT 1 cut(s) 48
BstC8I GCNNGC 1 cut(s) 226
BstDEI CTNAG 1 cut(s) 237
BstF5I GGATG 1 cut(s) 46
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 15
BstKTI GATC 2 cut(s) 57, 309
BstMBI GATC 2 cut(s) 54, 306
BstV1I GCAGC 2 cut(s) 71, 313
BstV2I GAAGAC 1 cut(s) 178
BstX2I RGATCY 1 cut(s) 54
BstYI RGATCY 1 cut(s) 54
BstZ17I GTATAC 1 cut(s) 70
BsuRI GGCC 1 cut(s) 224
BtsCI GGATG 1 cut(s) 46
Cac8I GCNNGC 1 cut(s) 226
CciI TCATGA 1 cut(s) 196
CfoI GCGC 2 cut(s) 7, 15
Cfr10I RCCGGY 1 cut(s) 224
CviAII CATG 1 cut(s) 197
CviJI RGCY 2 cut(s) 216, 224
CviKI_1 RGCY 2 cut(s) 216, 224
DdeI CTNAG 1 cut(s) 237
DpnI GATC 2 cut(s) 56, 308
DpnII GATC 2 cut(s) 54, 306
EaeI YGGCCR 1 cut(s) 222
FaeI CATG 1 cut(s) 200
FaiI YATR 8 cut(s) 70, 120, 131, 198, 206, 243, 248, 254
FalI AAGNNNNNCTT 2 cut(s) 313, 345
FatI CATG 1 cut(s) 196
FblI GTMKAC 1 cut(s) 69
Fnu4HI GCNGC 2 cut(s) 85, 327
FokI GGATG 1 cut(s) 53
Fsp4HI GCNGC 2 cut(s) 85, 327
FspI TGCGCA 1 cut(s) 14
GlaI GCGC 2 cut(s) 6, 14
GluI GCNGC 2 cut(s) 85, 327
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 1 cut(s) 224
HapII CCGG 2 cut(s) 38, 225
HhaI GCGC 2 cut(s) 7, 15
Hin1II CATG 1 cut(s) 200
Hin6I GCGC 2 cut(s) 5, 13
HinP1I GCGC 2 cut(s) 5, 13
HincII GTYRAC 1 cut(s) 149
HindII GTYRAC 1 cut(s) 149
HpaII CCGG 2 cut(s) 38, 225
Hpy166II GTNNAC 3 cut(s) 70, 127, 149
Hpy188I TCNGA 1 cut(s) 238
Hpy188III TCNNGA 3 cut(s) 52, 197, 292
Hpy8I GTNNAC 3 cut(s) 70, 127, 149
HpyAV CCTTC 2 cut(s) 100, 272
HpyCH4III ACNGT 1 cut(s) 48
HpyCH4IV ACGT 1 cut(s) 72
HpyF3I CTNAG 1 cut(s) 237
HpySE526I ACGT 1 cut(s) 72
Hsp92II CATG 1 cut(s) 200
HspAI GCGC 2 cut(s) 5, 13
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Kzo9I GATC 2 cut(s) 54, 306
LpnPI CCDG 6 cut(s) 51, 180, 230, 238, 300, 305
Lsp1109I GCAGC 2 cut(s) 71, 313
LweI GCATC 3 cut(s) 88, 160, 237
MaeII ACGT 1 cut(s) 72
MalI GATC 2 cut(s) 56, 308
MboI GATC 2 cut(s) 54, 306
MboII GAAGA 1 cut(s) 178
MflI RGATCY 1 cut(s) 54
MhlI GDGCHC 1 cut(s) 162
MluCI AATT 2 cut(s) 17, 190
MnlI CCTC 2 cut(s) 103, 276
MroNI GCCGGC 1 cut(s) 224
MseI TTAA 1 cut(s) 338
MspI CCGG 2 cut(s) 38, 225
NaeI GCCGGC 1 cut(s) 226
NdeII GATC 2 cut(s) 54, 306
NgoMIV GCCGGC 1 cut(s) 224
NlaIII CATG 1 cut(s) 200
NmeAIII GCCGAG 1 cut(s) 247
NsbI TGCGCA 1 cut(s) 14
PagI TCATGA 1 cut(s) 196
PdiI GCCGGC 1 cut(s) 226
PkrI GCNGC 2 cut(s) 86, 328
PshBI ATTAAT 1 cut(s) 338
PsuI RGATCY 1 cut(s) 54
SaqAI TTAA 1 cut(s) 338
SatI GCNGC 2 cut(s) 85, 327
Sau3AI GATC 2 cut(s) 54, 306
SduI GDGCHC 1 cut(s) 162
SetI ASST 5 cut(s) 75, 126, 136, 169, 283
SfaNI GCATC 3 cut(s) 88, 160, 237
Sse9I AATT 2 cut(s) 17, 190
SsiI CCGC 1 cut(s) 35
SspI AATATT 1 cut(s) 342
TaaI ACNGT 1 cut(s) 48
TaiI ACGT 1 cut(s) 75
TaqI TCGA 1 cut(s) 51
TasI AATT 2 cut(s) 17, 190
Tru1I TTAA 1 cut(s) 338
Tru9I TTAA 1 cut(s) 338
TseI GCWGC 2 cut(s) 84, 326
TspDTI ATGAA 2 cut(s) 165, 185
VspI ATTAAT 1 cut(s) 338
XmiI GTMKAC 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.