Rroxscaffold_2G00155040

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
91458251 .. 91466755
8505 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00155040.1

Sequence Viewer

Length: 3504 bp
ATGGCGTTGTTGCGCAAATTGTTCTATCGCAAACCGCCGGATGGACTGTTCGAGATCTGTGAGCGAGTATACGTTTTTGATTGCTGCTTCACTACCGATGCTTGGAAGGAGGAAAACTATAAGGTTTACATAGCTGGGGCGGTTGGTCAACTACAAGAGCACTTACCTGATGCTTCATTCTTGGTCTTCAATTTTCATGATGGTATGGCACAGAGCCAGATGGCCGGCATCTTGTCTGAGTATGATATGACCATAATGGATTACCCTCGGCACTTTGAAGGTTGTCCTGTCCTGACGATGGAGTTGATCCATCACTTTCTTAGATCAAGTGAAAGCTGGTTAGGACTTGGGCACAACAACGTGCTTTTGATGCATTGTGAGCGTGGAGGTTGGCCTGTTTTGGCCTTCATGCTGGCTGCACTCTTGATTTACAGGAAGCATTATACTGGTGAGCATAGGACGTTGGACATGGTTTACAGGCAGGCTCCCCTTGAGCTTTTGCATTTGCTATCAGCCTTAAATCCAATTCCTTCTCAACTTAGGTATCTACAGTATGTATCGAGGAGGAATGTAGCCTTAGAATGGCCTCCTCTGGATCGAGCACTTACCTTGGACTGCGTCATTTTTAGATTTATTCCTAATTTTGATGGGCAAGGAGGTTGCCGTCCTATATTTCGAATATATGGGCAAGACCCTTTTCTTGTTACTGATCGAACTTCCAAAGTCTTATACTCAACTCCAAAACGAAGCAAAACCATCCGGGCTTACAAGCAGGCAGAATGTGAACTGGTTAAAATTGACATTAATTGCCATATTCAAGGTGATGTTGTTCTTGAATGCATTAGCTTGCATAATGATATGGAACGTGAACAGATGATGTTCCGCGTCATGTTCAATACAGCTTTTATTAGGTCTAACATTTTGATGCTCAACCGTGATGAAATAGACATGTTGTGGGATGTAAAGGAACAATTTCCAAAGGACTTTAGAGTAGAGATCCTTTTCTCAGAGATGGATGCTGTCTCATCTATTATTCTTGGTGGTATGTCATGCTTTGAGGATAAGGAGGGACTTCCAATGGAAGCATTTGATCAAGTTCAAGAGATCTTTAGCTATGTTGATTGGTTAGATCCCAAAACAGATGCTGCATTGAATGTTCTTCAACAGTTAGGTGCATCGAATATCACCCATGAAAAGTTGGATACTGATTCTTCCCAGAATGATGGAAAAGAAAATATAATGCAGGAAAAAATACCTAAACAGATACCAAATATAAAGACATCCTTGAATTTGGAAAACGATTCTAAGATTCTATCCTCCTCGGAGGTGCAGTCAGTGGCCTCACCAGATACAAGTGTCAGTAAACAGGAAGCCAAACCTCAAGACGTTCAGCGACCCAATCAATGTGATTCAGTGAGCCAGCACATGCCACAACCTCCTCAATCAGAGCCAATGAAGGCATTTGCTCAAGTTCAGGAGATCATTAGCCAAGTGCCCTCAACTACGCAATCTCCAGATAGCACTGTGACTAAACCTGAAGCCAAACAAACCATTCATACTGCACAGCAGCCACCTAACCAATCTGATTCAGTGTCCCAGCAGAGGCCCCAACCTCCTATGTTAACGCCAATAGAAGCATTCATTCAAGTTCAAGATATCTTCAGCCGTGTAGCCTCACCTAAAAAATCTCAAGATTCCACTTTGAATAAACAGGAAGCTATACCTCAAGATACTTATACTGCATCTCAGCCACATATTCCCCAACCTTCTAAGTCAATCCCAGTTTCCTCTGGAGCCCAAAGTGTTTCAGTTGCACCACCAACACCTCCACCAGCTTCTCCATTGCAACCTACTTCTGCTATTACAACTCCTCCTCCTCCTCCATCACCTCCACTTCAACCTCAACATGCATCACTTCCAAAGCCCAAAGATGCACTTTCCAAAGATACTGAAACCCAACCATCTAGCCCTGGGAGGATACCCCCTCCTCTCCTCCAGTTTCTGAAACCTCCCCCACCTCCACCACCTCCTCTTCACTCAGGGCAAGCTGGAAGCACTGCAAATGCATCTCCAGTTCCAGTGCCACCAGCACCACCTAGTGCACCCCCTCCTCCTCCTCCTCCACTCTCAGGGAAATCTGGAGGAGGTTCCAAGCCTGGAACTCCTCCACCACCACCAGTTGGTTCCGCCAGTAATGCAAAAGGCCGTCTATCACGTACCATAAGTTCTAAGGATAATCAAAAGAAACTGAAGCCATTACACTGGTTGAAACTATCAAGAGCAGTTCAGGGAAGTTTATGGGCTGAGGCTGAAAAATCCAGTGAAGACACGAAGGCTCCAGAGATTGACATGTCAGAGCTTGAGAATCTTTTCGCAGCGGCAGTTCCAACTTCAGATCAGGGCAAGAAAGGAACTACACCAGGTCCAGTTGCCCCTAAATCTGACAAAGTGCAATTGATTGACCACAGACGGGCGTACAATTGTGAAATCATGCTTTCAAAGGTGAAGGTTCCCTTGCATGAGTTAACGAATTCGGTGCTTGCCCTGGAAAATACAGCATTAGATCCTGACCAGGTCGAGAACTTAATAAAGTTTTGTCCAACTAAAGAGGAGATGGAGCTACTTAAGGGATATAAGGGAGAGAAGGAGAAGTTAGGAAAATGTGAACAGTTCTTGTTAGAGTTAATGAAAGTACCTCGAGTGGAATCTAAGCTCAGAGTTTTTTCGTTCAAAATACAATTCTCTTCCCAGGTTTCTGACCTTAGGAAAAGCCTGAATGTTGTAAACTCTGCAGCAGAAGAGGCAAGTTATTCATTTTTGTCCCTTCAAACCACTCATGGCAAATTGAAGAGAGTTATGCAGACAATTCTTTCCTTAGGAAATGCTTTGAACCAGGGGACAGCTCGGGGGGCTGCTATCGGATTTAGATTGGATAGTCTTCTTAAACTCATTGACACTCGTGCAAGGAACAACAAGATGACTCTCATGCATTATCTCTGTAAGGTTCTTGCTGACCAACTACCAGAGGTTCTAGATTTCTCAAAGGACCTATCCAGCTTAGAGCCTGCATCAAAGATACAATTGAAATTTTTGGCAGAGGAAATGCAAGCAGTAAGTAAAGGACTGGAGAAAGTTGTACAGGAATTATCTACTTCTGAAAATGACGGTCCTATATCAAAAAATTTCCGTAAGACCCTAAAGGAGTTCCTCCGTTCTGCTGAAGCCGAGGTGAGATCTTTGGCTTTACTATATTCTAGCGTGGGTAGAAATGTGGATGCATTGATTCTTTATTTTGGAGAAGATCCTTCAAAATGCCCGTTTGAACAAGTTATTTCAACCTTACTCAACTTTGTCAGAATGTTCATCAAGTCCCATGACGAAAATTGCAAGCAAAGTGAGCTTGAAATGAAACAAGCAGCAGAAAGTGAGAAGGTCAAGATGGGTGCTTCCAATCAGTCAGAACGGGTGTTACGTACTCCAATCCATAATAGCAATGTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1167

Amino Acids

129.83

Weight (kDa)

6.53

Isoelectric Point (pI)

54.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 199 - 337 5.4e-41 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 744 - 1121 1.5e-112 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 14
AccB7I CCANNNNNTGG 1 cut(s) 2180
AccI GTMKAC 1 cut(s) 69
AccII CGCG 1 cut(s) 885
AciI CCGC 5 cut(s) 35, 140, 883, 2187, 2378
AclWI GGATC 6 cut(s) 301, 603, 991, 1124, 2558, 3296
AcoI YGGCCR 1 cut(s) 222
AcsI RAATTY 4 cut(s) 1288, 2530, 3086, 3181
AcuI CTGAAG 5 cut(s) 1557, 1645, 2270, 2376, 3240
AdeI CACNNNGTG 1 cut(s) 2099
AfaI GTAC 5 cut(s) 2218, 2477, 2694, 3138, 3475
AfiI CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2129, 2180, 2470
AflII CTTAAG 1 cut(s) 2624
AflIII ACRYGT 2 cut(s) 948, 2349
AjnI CCWGG 7 cut(s) 1969, 2155, 2419, 2544, 2571, 2748, 2892
AloI GAACNNNNNNTCC 2 cut(s) 32, 64
Alw21I GWGCWC 3 cut(s) 162, 604, 2104
Alw26I GTCTC 1 cut(s) 1027
Alw44I GTGCAC 1 cut(s) 2100
AlwI GGATC 6 cut(s) 301, 603, 991, 1124, 2558, 3296
AlwNI CAGNNNCTG 2 cut(s) 1145, 2002
Ama87I CYCGRG 2 cut(s) 2697, 2904
AoxI GGCC 7 cut(s) 222, 392, 402, 584, 1338, 1604, 2203
ApaLI GTGCAC 1 cut(s) 2100
ApeKI GCWGC 8 cut(s) 84, 416, 1145, 1567, 2375, 2792, 2912, 3416
ApoI RAATTY 4 cut(s) 1288, 2530, 3086, 3181
AseI ATTAAT 1 cut(s) 804
Asp700I GAANNNNTTC 2 cut(s) 972, 2369
AspLEI GCGC 1 cut(s) 15
AspS9I GGNCC 4 cut(s) 1605, 2423, 3046, 3167
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 8 cut(s) 461, 833, 1177, 1335, 1668, 1878, 2515, 3241
AsuII TTCGAA 1 cut(s) 676
AvaI CYCGRG 2 cut(s) 2697, 2904
AvaII GGWCC 3 cut(s) 2423, 3046, 3167
AxyI CCTNAGG 2 cut(s) 2762, 2875
BaeGI GKGCMC 3 cut(s) 354, 1497, 2104
BaeI ACNNNNGTAYC 4 cut(s) 527, 560, 1341, 1374
BanII GRGCYC 1 cut(s) 1798
BauI CACGAG 1 cut(s) 2958
BbsI GAAGAC 3 cut(s) 178, 2331, 2930
Bbv12I GWGCWC 3 cut(s) 162, 604, 2104
BbvCI CCTCAGC 1 cut(s) 2304
BbvI GCAGC 8 cut(s) 71, 403, 1132, 1579, 2387, 2804, 2899, 3428
BceAI ACGGC 3 cut(s) 648, 1650, 2190
BcgI CGANNNNNNTGC 2 cut(s) 2518, 2552
BciT130I CCWGG 7 cut(s) 1971, 2157, 2421, 2546, 2573, 2750, 2894
BciVI GTATCC 2 cut(s) 1195, 1971
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 1 cut(s) 1027
BfaI CTAG 4 cut(s) 1965, 2097, 3032, 3255
BfmI CTRYAG 2 cut(s) 548, 2790
BfrI CTTAAG 1 cut(s) 2624
BfuI GTATCC 2 cut(s) 1195, 1971
BglII AGATCT 3 cut(s) 54, 1104, 3233
BisI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2376, 2379, 2793, 2913, 3417
BlsI GCNGC 9 cut(s) 86, 418, 1147, 1569, 2377, 2380, 2794, 2914, 3418
Bme1390I CCNGG 8 cut(s) 761, 1971, 2157, 2421, 2546, 2573, 2750, 2894
Bme18I GGWCC 3 cut(s) 2423, 3046, 3167
BmeT110I CYCGRG 2 cut(s) 2697, 2904
BmgT120I GGNCC 4 cut(s) 1605, 2423, 3046, 3167
BmiI GGNNCC 7 cut(s) 486, 1607, 1795, 2149, 2185, 2337, 2511
BmrFI CCNGG 8 cut(s) 761, 1971, 2157, 2421, 2546, 2573, 2750, 2894
BmrI ACTGGG 1 cut(s) 1775
BmuI ACTGGG 1 cut(s) 1775
BpiI GAAGAC 3 cut(s) 178, 2331, 2930
BpmI CTGGAG 7 cut(s) 1497, 1812, 1979, 2055, 2160, 2322, 3146
Bpu10I CCTNAGC 1 cut(s) 2304
Bpu14I TTCGAA 1 cut(s) 676
BpuEI CTTGAG 6 cut(s) 512, 1365, 1452, 1674, 1710, 2381
BpuMI CCSGG 1 cut(s) 761
BsaAI YACGTR 2 cut(s) 2216, 3473
BsaJI CCNNGG 9 cut(s) 266, 609, 1320, 1969, 1970, 2544, 2748, 2893, 3225
Bsc4I CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2129, 2180, 2470
Bse118I RCCGGY 1 cut(s) 224
Bse21I CCTNAGG 2 cut(s) 2762, 2875
Bse3DI GCAATG 2 cut(s) 1841, 3499
BseBI CCWGG 7 cut(s) 1971, 2157, 2421, 2546, 2573, 2750, 2894
BseDI CCNNGG 9 cut(s) 266, 609, 1320, 1969, 1970, 2544, 2748, 2893, 3225
BseGI GGATG 6 cut(s) 46, 756, 964, 1021, 1280, 3280
BseLI CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2129, 2180, 2470
BseMI GCAATG 2 cut(s) 1841, 3499
BseMII CTCAG 7 cut(s) 228, 1020, 1760, 2052, 2142, 2295, 2728
BseSI GKGCMC 3 cut(s) 354, 1497, 2104
BseXI GCAGC 8 cut(s) 71, 403, 1132, 1579, 2387, 2804, 2899, 3428
BseYI CCCAGC 2 cut(s) 134, 1596
BsgI GTGCAG 3 cut(s) 402, 1349, 1545
Bsh1236I CGCG 1 cut(s) 885
BshFI GGCC 7 cut(s) 224, 394, 404, 586, 1340, 1606, 2205
BsiHKAI GWGCWC 3 cut(s) 162, 604, 2104
BsiHKCI CYCGRG 2 cut(s) 2697, 2904
BsiSI CCGG 3 cut(s) 38, 225, 760
BslFI GGGAC 5 cut(s) 1083, 1579, 2806, 2911, 3355
BslI CCNNNNNNNGG 8 cut(s) 41, 102, 298, 582, 1602, 2129, 2180, 2470
BsmAI GTCTC 1 cut(s) 1027
BsmFI GGGAC 5 cut(s) 1083, 1579, 2806, 2911, 3355
BsmI GAATGC 2 cut(s) 842, 1637
BsnI GGCC 7 cut(s) 224, 394, 404, 586, 1340, 1606, 2205
BsoBI CYCGRG 2 cut(s) 2697, 2904
Bsp119I TTCGAA 1 cut(s) 676
Bsp1286I GDGCHC 6 cut(s) 162, 354, 604, 1497, 1798, 2104
Bsp1407I TGTACA 1 cut(s) 3136
BspACI CCGC 5 cut(s) 35, 140, 883, 2187, 2378
BspANI GGCC 7 cut(s) 224, 394, 404, 586, 1340, 1606, 2205
BspCNI CTCAG 7 cut(s) 229, 1019, 1759, 2051, 2141, 2296, 2727
BspFNI CGCG 1 cut(s) 885
BspHI TCATGA 1 cut(s) 196
BspLI GGNNCC 7 cut(s) 486, 1607, 1795, 2149, 2185, 2337, 2511
BspMAI CTGCAG 1 cut(s) 2794
BspPI GGATC 6 cut(s) 301, 603, 991, 1124, 2558, 3296
BspT104I TTCGAA 1 cut(s) 676
BspTI CTTAAG 1 cut(s) 2624
BsrDI GCAATG 2 cut(s) 1841, 3499
BsrFI RCCGGY 1 cut(s) 224
BsrGI TGTACA 1 cut(s) 3136
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 9 cut(s) 266, 609, 1320, 1969, 1970, 2544, 2748, 2893, 3225
BssNAI GTATAC 1 cut(s) 70
BssSI CACGAG 1 cut(s) 2958
BssT1I CCWWGG 1 cut(s) 609
Bst1107I GTATAC 1 cut(s) 70
Bst2BI CACGAG 1 cut(s) 2958
Bst2UI CCWGG 7 cut(s) 1971, 2157, 2421, 2546, 2573, 2750, 2894
Bst4CI ACNGT 7 cut(s) 48, 552, 935, 1167, 1525, 2670, 3167
Bst6I CTCTTC 4 cut(s) 2037, 2749, 2793, 2843
BstAFI CTTAAG 1 cut(s) 2624
BstAUI TGTACA 1 cut(s) 3136
BstBAI YACGTR 2 cut(s) 2216, 3473
BstBI TTCGAA 1 cut(s) 676
BstF5I GGATG 6 cut(s) 46, 756, 964, 1021, 1280, 3280
BstFNI CGCG 1 cut(s) 885
BstHHI GCGC 1 cut(s) 15
BstMAI GTCTC 1 cut(s) 1027
BstMWI GCNNNNNNNGC 6 cut(s) 370, 379, 2195, 2801, 2909, 3397
BstNI CCWGG 7 cut(s) 1971, 2157, 2421, 2546, 2573, 2750, 2894
BstNSI RCATGY 4 cut(s) 952, 1429, 1910, 2353
BstSCI CCNGG 8 cut(s) 759, 1969, 2155, 2419, 2544, 2571, 2748, 2892
BstSFI CTRYAG 2 cut(s) 548, 2790
BstSLI GKGCMC 3 cut(s) 354, 1497, 2104
BstSNI TACGTA 1 cut(s) 3473
BstUI CGCG 1 cut(s) 885
BstV1I GCAGC 8 cut(s) 71, 403, 1132, 1579, 2387, 2804, 2899, 3428
BstV2I GAAGAC 3 cut(s) 178, 2331, 2930
BstX2I RGATCY 7 cut(s) 54, 996, 1104, 1129, 2563, 3233, 3301
BstXI CCANNNNNNTGG 2 cut(s) 1223, 2262
BstYI RGATCY 7 cut(s) 54, 996, 1104, 1129, 2563, 3233, 3301
BstZ17I GTATAC 1 cut(s) 70
Bsu36I CCTNAGG 2 cut(s) 2762, 2875
BsuI GTATCC 2 cut(s) 1195, 1971
BsuRI GGCC 7 cut(s) 224, 394, 404, 586, 1340, 1606, 2205
BtsCI GGATG 6 cut(s) 46, 756, 964, 1021, 1280, 3280
BtsI GCAGTG 1 cut(s) 2055
BtsIMutI CAGTG 8 cut(s) 1341, 1419, 1521, 1596, 2055, 2085, 2260, 2326
CaiI CAGNNNCTG 2 cut(s) 1145, 2002
CciI TCATGA 1 cut(s) 196
CfoI GCGC 1 cut(s) 15
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 4 cut(s) 1605, 2423, 3046, 3167
CseI GACGC 2 cut(s) 607, 874
CsiI ACCWGGT 2 cut(s) 2419, 2571
Csp6I GTAC 5 cut(s) 2217, 2476, 2693, 3137, 3474
CviQI GTAC 5 cut(s) 2217, 2476, 2693, 3137, 3474
DraIII CACNNNGTG 1 cut(s) 2099
EaeI YGGCCR 1 cut(s) 222
Eam1104I CTCTTC 4 cut(s) 2037, 2749, 2793, 2843
EarI CTCTTC 4 cut(s) 2037, 2749, 2793, 2843
EciI GGCGGA 1 cut(s) 2176
Eco105I TACGTA 1 cut(s) 3473
Eco130I CCWWGG 1 cut(s) 609
Eco24I GRGCYC 1 cut(s) 1798
Eco32I GATATC 1 cut(s) 1657
Eco47I GGWCC 3 cut(s) 2423, 3046, 3167
Eco57I CTGAAG 5 cut(s) 1557, 1645, 2270, 2376, 3240
Eco81I CCTNAGG 2 cut(s) 2762, 2875
Eco88I CYCGRG 2 cut(s) 2697, 2904
EcoO109I RGGNCCY 2 cut(s) 1605, 3046
EcoRI GAATTC 1 cut(s) 2530
EcoRII CCWGG 7 cut(s) 1969, 2155, 2419, 2544, 2571, 2748, 2892
EcoRV GATATC 1 cut(s) 1657
EcoT14I CCWWGG 1 cut(s) 609
EcoT22I ATGCAT 6 cut(s) 375, 842, 1912, 2068, 2991, 3280
EcoT38I GRGCYC 1 cut(s) 1798
ErhI CCWWGG 1 cut(s) 609
FalI AAGNNNNNCTT 6 cut(s) 1268, 1300, 1920, 1952, 2498, 2530
FaqI GGGAC 5 cut(s) 1083, 1579, 2806, 2911, 3355
FbaI TGATCA 1 cut(s) 1090
FblI GTMKAC 1 cut(s) 69
Fnu4HI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2376, 2379, 2793, 2913, 3417
FokI GGATG 6 cut(s) 53, 743, 971, 1028, 1267, 3287
FriOI GRGCYC 1 cut(s) 1798
Fsp4HI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2376, 2379, 2793, 2913, 3417
FspBI CTAG 4 cut(s) 1965, 2097, 3032, 3255
FspI TGCGCA 1 cut(s) 14
GlaI GCGC 1 cut(s) 14
GluI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2376, 2379, 2793, 2913, 3417
GsaI CCCAGC 2 cut(s) 138, 1600
GsuI CTGGAG 7 cut(s) 1497, 1812, 1979, 2055, 2160, 2322, 3146
HaeIII GGCC 7 cut(s) 224, 394, 404, 586, 1340, 1606, 2205
HapII CCGG 3 cut(s) 38, 225, 760
HgaI GACGC 2 cut(s) 607, 874
HhaI GCGC 1 cut(s) 15
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HincII GTYRAC 3 cut(s) 149, 1623, 2526
HindII GTYRAC 3 cut(s) 149, 1623, 2526
HpaI GTTAAC 2 cut(s) 1623, 2526
HpaII CCGG 3 cut(s) 38, 225, 760
HphI GGTGA 8 cut(s) 461, 833, 1177, 1335, 1668, 1878, 2515, 3241
HpyCH4III ACNGT 7 cut(s) 48, 552, 935, 1167, 1525, 2670, 3167
HpyCH4IV ACGT 7 cut(s) 72, 360, 461, 865, 1386, 2215, 3472
HpyF10VI GCNNNNNNNGC 6 cut(s) 370, 379, 2195, 2801, 2909, 3397
HpySE526I ACGT 7 cut(s) 72, 360, 461, 865, 1386, 2215, 3472
HspAI GCGC 1 cut(s) 13
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 1090
KspAI GTTAAC 2 cut(s) 1623, 2526
LmnI GCTCC 4 cut(s) 490, 1793, 2341, 2617
Lsp1109I GCAGC 8 cut(s) 71, 403, 1132, 1579, 2387, 2804, 2899, 3428
MabI ACCWGGT 2 cut(s) 2419, 2571
MaeI CTAG 4 cut(s) 1965, 2097, 3032, 3255
MaeII ACGT 7 cut(s) 72, 360, 461, 865, 1386, 2215, 3472
MaeIII GTNAC 3 cut(s) 703, 1525, 3468
MfeI CAATTG 3 cut(s) 2453, 2479, 3080
MflI RGATCY 7 cut(s) 54, 996, 1104, 1129, 2563, 3233, 3301
MhlI GDGCHC 6 cut(s) 162, 354, 604, 1497, 1798, 2104
MlyI GAGTC 1 cut(s) 2974
MmeI TCCRAC 4 cut(s) 444, 1179, 2411, 2624
Mph1103I ATGCAT 6 cut(s) 375, 842, 1912, 2068, 2991, 3280
MroNI GCCGGC 1 cut(s) 224
MroXI GAANNNNTTC 2 cut(s) 972, 2369
MseI TTAA 9 cut(s) 518, 792, 804, 1622, 2525, 2585, 2625, 2684, 2943
MslI CAYNNNNRTG 1 cut(s) 923
MspA1I CMGCKG 1 cut(s) 2378
MspCI CTTAAG 1 cut(s) 2624
MspI CCGG 3 cut(s) 38, 225, 760
MspR9I CCNGG 8 cut(s) 761, 1971, 2157, 2421, 2546, 2573, 2750, 2894
MunI CAATTG 3 cut(s) 2453, 2479, 3080
Mva1269I GAATGC 2 cut(s) 842, 1637
MvaI CCWGG 7 cut(s) 1971, 2157, 2421, 2546, 2573, 2750, 2894
MvnI CGCG 1 cut(s) 885
MwoI GCNNNNNNNGC 6 cut(s) 370, 379, 2195, 2801, 2909, 3397
NaeI GCCGGC 1 cut(s) 226
NciI CCSGG 1 cut(s) 761
NgoMIV GCCGGC 1 cut(s) 224
NlaIV GGNNCC 7 cut(s) 486, 1607, 1795, 2149, 2185, 2337, 2511
NmeAIII GCCGAG 2 cut(s) 247, 3250
NmuCI GTSAC 1 cut(s) 1525
NsbI TGCGCA 1 cut(s) 14
NsiI ATGCAT 6 cut(s) 375, 842, 1912, 2068, 2991, 3280
NspI RCATGY 4 cut(s) 952, 1429, 1910, 2353
NspV TTCGAA 1 cut(s) 676
PaeR7I CTCGAG 1 cut(s) 2697
PagI TCATGA 1 cut(s) 196
PasI CCCWGGG 1 cut(s) 1970
PciI ACATGT 2 cut(s) 948, 2349
PcsI WCGNNNNNNNCGW 1 cut(s) 3469
PctI GAATGC 2 cut(s) 842, 1637
PdiI GCCGGC 1 cut(s) 226
PdmI GAANNNNTTC 2 cut(s) 972, 2369
PfeI GAWTC 9 cut(s) 1208, 1301, 1309, 1409, 1586, 1694, 2365, 2705, 3283
PflFI GACNNNGTC 2 cut(s) 617, 2573
PflMI CCANNNNNTGG 1 cut(s) 2180
PkrI GCNGC 9 cut(s) 86, 418, 1147, 1569, 2377, 2380, 2794, 2914, 3418
PleI GAGTC 1 cut(s) 2974
PpsI GAGTC 1 cut(s) 2974
Ppu21I YACGTR 2 cut(s) 2216, 3473
PpuMI RGGWCCY 1 cut(s) 3046
PscI ACATGT 2 cut(s) 948, 2349
PshBI ATTAAT 1 cut(s) 804
Psp5II RGGWCCY 1 cut(s) 3046
Psp6I CCWGG 7 cut(s) 1969, 2155, 2419, 2544, 2571, 2748, 2892
PspFI CCCAGC 2 cut(s) 134, 1596
PspGI CCWGG 7 cut(s) 1969, 2155, 2419, 2544, 2571, 2748, 2892
PspN4I GGNNCC 7 cut(s) 486, 1607, 1795, 2149, 2185, 2337, 2511
PspPI GGNCC 4 cut(s) 1605, 2423, 3046, 3167
PspPPI RGGWCCY 1 cut(s) 3046
PspXI VCTCGAGB 1 cut(s) 2697
PsrI GAACNNNNNNTAC 4 cut(s) 2209, 2241, 3453, 3485
PstI CTGCAG 1 cut(s) 2794
PstNI CAGNNNCTG 2 cut(s) 1145, 2002
PsuI RGATCY 7 cut(s) 54, 996, 1104, 1129, 2563, 3233, 3301
PsyI GACNNNGTC 2 cut(s) 617, 2573
RsaI GTAC 5 cut(s) 2218, 2477, 2694, 3138, 3475
RsaNI GTAC 5 cut(s) 2217, 2476, 2693, 3137, 3474
RseI CAYNNNNRTG 1 cut(s) 923
SaqAI TTAA 9 cut(s) 518, 792, 804, 1622, 2525, 2585, 2625, 2684, 2943
SatI GCNGC 9 cut(s) 85, 417, 1146, 1568, 2376, 2379, 2793, 2913, 3417
Sau96I GGNCC 4 cut(s) 1605, 2423, 3046, 3167
SchI GAGTC 1 cut(s) 2974
ScrFI CCNGG 8 cut(s) 761, 1971, 2157, 2421, 2546, 2573, 2750, 2894
SduI GDGCHC 6 cut(s) 162, 354, 604, 1497, 1798, 2104
SexAI ACCWGGT 2 cut(s) 2419, 2571
SfcI CTRYAG 2 cut(s) 548, 2790
Sfr274I CTCGAG 1 cut(s) 2697
SfuI TTCGAA 1 cut(s) 676
SinI GGWCC 3 cut(s) 2423, 3046, 3167
SlaI CTCGAG 1 cut(s) 2697
SmiMI CAYNNNNRTG 1 cut(s) 923
SmlI CTYRAG 8 cut(s) 491, 1380, 1467, 1689, 1725, 2360, 2624, 2697
SmoI CTYRAG 8 cut(s) 491, 1380, 1467, 1689, 1725, 2360, 2624, 2697
SnaBI TACGTA 1 cut(s) 3473
SsiI CCGC 5 cut(s) 35, 140, 883, 2187, 2378
SspMI CTAG 4 cut(s) 1965, 2097, 3032, 3255
StyD4I CCNGG 8 cut(s) 759, 1969, 2155, 2419, 2544, 2571, 2748, 2892
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 7 cut(s) 48, 552, 935, 1167, 1525, 2670, 3167
TaiI ACGT 7 cut(s) 75, 363, 464, 868, 1389, 2218, 3475
TaqI TCGA 8 cut(s) 51, 560, 598, 676, 712, 1178, 2577, 2698
TatI WGTACW 1 cut(s) 3136
TauI GCSGC 1 cut(s) 2381
TfiI GAWTC 9 cut(s) 1208, 1301, 1309, 1409, 1586, 1694, 2365, 2705, 3283
Tru1I TTAA 9 cut(s) 518, 792, 804, 1622, 2525, 2585, 2625, 2684, 2943
Tru9I TTAA 9 cut(s) 518, 792, 804, 1622, 2525, 2585, 2625, 2684, 2943
TscAI CASTG 8 cut(s) 1341, 1419, 1528, 1596, 2062, 2085, 2267, 2326
TseFI GTSAC 1 cut(s) 1525
TseI GCWGC 8 cut(s) 84, 416, 1145, 1567, 2375, 2792, 2912, 3416
Tsp45I GTSAC 1 cut(s) 1525
TspGWI ACGGA 2 cut(s) 3176, 3200
TspRI CASTG 8 cut(s) 1341, 1419, 1528, 1596, 2062, 2085, 2267, 2326
Tth111I GACNNNGTC 2 cut(s) 617, 2573
Van91I CCANNNNNTGG 1 cut(s) 2180
Vha464I CTTAAG 1 cut(s) 2624
VneI GTGCAC 1 cut(s) 2100
VpaK11BI GGWCC 3 cut(s) 2423, 3046, 3167
VspI ATTAAT 1 cut(s) 804
XapI RAATTY 4 cut(s) 1288, 2530, 3086, 3181
XbaI TCTAGA 1 cut(s) 3031
XceI RCATGY 4 cut(s) 952, 1429, 1910, 2353
XhoI CTCGAG 1 cut(s) 2697
XmiI GTMKAC 1 cut(s) 69
XmnI GAANNNNTTC 2 cut(s) 972, 2369
XspI CTAG 4 cut(s) 1965, 2097, 3032, 3255
Zsp2I ATGCAT 6 cut(s) 375, 842, 1912, 2068, 2991, 3280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.