MD15G1158500.v1.1

G-patch domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012311
Physical Location & Seq
Reverse (-)
11772377 .. 11777198
4822 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1158500.v1.1.491

Sequence Viewer

Length: 2274 bp
ATGGCTGGAGGCAGAGGAAGAAGAAGACCCAACAGCAACGACAGCAGCAACTTAAATTGGAGCAGCGGTAGGAGAAGAGCATCGTCATCGTCGTCGTCAAAATCCAAATTTCGAGGAGGTCTGCTCGTGGAGGGCGGCGTTTTATCCGATTGGTCATACCCTCAAACCGCTCAGCGAGGGAAAAATCCGAGTTCGAGCAACAAATCTGCTACGAAATCTGTAGCAAAAGCAGCTTCTGGGTCGAAAAGTGATTCTCGGGGATCTAATGTTACCGCTATAGGGTTCCAATACCCTTCTGTTGAATTTCAGGAGGGTTTCTATTCAGAATTACGCAAGGGTAGTGATGCAGACAAAGATATGGACGAGTCATGCCCTTTGGTTTTAGTTGATTACAAGGATACCCAAATTTTAGCTCATGGGGACCAAACACAACCGTCAAGCCCCTATGAAGTGGAATTTACTTATCACTACGGTTCAAGTTTTGTGTTAGGTGAAAGCTCTCATAGAGGGCTAGGGTTCTCTGATGAACTTGAGGAAACCCCAAGTGGTGTTGAAGATTCCTCAAAGCAAATGGAAGAGCCAGAAGATTCATGTTTTAACTTGCAATCTTCTGAGAAACATATGGATGCCAATGATGGGATGGATTGTGAAGTTGGCGATGATGAGATGGCTGAAGAGATGACAACAGAGATGTTGTCGCCCAAGAGGAACTCAGGCTTTTTGTCAATTGGTGGCATGAGATTATACACCCAAGATATTTCTGATGAAGAAAGTGAAGAAGATGAAAATGGAGAGTCACTGTATGAAGGAAGCTCAGGCTCTTCTAAGTCTGGAGAACGACTTGGATCCTCTGAAAGTGAAGACTTGTCTGATAGTGATTCAGATATAGATGACGAGGTTGCAGACGATTATTTAGTGGGAATTGGTGGTAGTTACAACATCTTAAGTTCCAAATTTTTGGTGGAACAGGATTTGGATGAGCCGGATAAGAATAGCTCTTTGAGGAAGGGCTTTGATGAGACTTTGCAGAAGTTGGGCGGAATTGCTCTTCAGGATGCATCTAGGGAGTACGGTAGGAAGAAGGTCCAGTCACAAAAGAAATACAATGTGACTGAAAGACATGCTCGGTCTTTGGCTATAGATGACCTAATGCTTGTAAAGGATACAAGAAATTATTCCAAAAAGAAACCTGTTGCCAAATTTCCTCAGTCTTGGCCTGCAGAAGCTCAAAGGAGTAAATTCTCAAGACATTTTCCTGGGACAAAAAAGAAACATCGTAAAGAAATGATGGCTGTGAAGCGTAAGGAGAGAATGCTGCGCCAAGGTGTTGATCTTGAGCAAATAAATCTGAAAATGGAGCAAATTGTTTCAGATGCAGTAGATATGTTTTCTTTTCAGCCTATGCATTCCCGGGATTGTTCCCAGGTTCAGCGATTATCCGGAATGTATGGCCTGAGGAGTTCCTGCCAAGGATCTGGCAAGAAGAGATTTGTGACAGTGATGCAGACACAACACACTGGCATGCCATCTGCAAGTGATAGACTTTGTCTTGAAAAGCTGATTGGAGCTGACATGGAGGATGCTGATTTCTCTGTTGTTGAGCCTGGTAGAGACAAAAACAGGCCAAGGAAAATTGGAAAAGGAATTGATTTTAAGACACCGGAATCTAAACAATCCAGCCAAAGAAAGACGCCGAAAACGTCAGCCAAACGTGGCAGTGGGAATATGGATTCATATGCTAATACACCAGTATCATTTGTGTCAAGTGGCGTAATGCAATCAGCGGCTGAGGGTTTAACTGTTGACTCAATAGAAGCAAGTAAAAACAAGGTTGCTGCTGAGTCAACTGAATATCGTTCCTTTGAGGTACACACTAAGGGTTTTGGATCAAAAATGCTGGCTAAAATGGGATACATAGAAGGTGGTGGCTTAGGAAAAGATGGACAAGGTATGGCTGCACCCATCGAAGTGATCCAACGGCCTAAATCACTTGGCTTGGGTGTGGAATTCTCCACCCCCGTTGAGATCCCAGTCAGTAAAACACCCCCAGTAAAGAATATCCCGGTAAGAAGAAGATCTCAGGCTCAGAGTTCTCAAACTCAGAGTGAAAGAGTTGGATCTTTCGAAAAGCATACCAAAGGATTTGGATCGAAGATGATGGCGAAAATGGGTTTTGTTGAAGGCATGGGGTTGGGGAAAGATTCACAAGGCATTGTCTACCCTCTGGCTGCAGTCAGGCTACCGAAGTCGAGGGGATTAGGTACCTCAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-patch R3H

Protein Analysis

758

Amino Acids

82.83

Weight (kDa)

6.49

Isoelectric Point (pI)

58.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
R3H PF01424 445 - 501 9.8e-08 R3H domain
G-patch PF01585 625 - 669 3.9e-15 G-patch domain
G-patch_2 PF12656 626 - 669 5.1e-09 G-patch domain
G-patch PF01585 712 - 755 1.7e-15 G-patch domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012311)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09850
fragaria_vesca FvH4_1g01590
malus_domestica MD02G1012700.v1.1 MD15G1158500.v1.1
prunus_persica Prupe.7G253700_v2.0.a1 Prupe.7G253700_v2.0.a1
pyrus_communis pycom02g01190 pycom15g14220
rosa_chinensis RchiOBHm_Chr2g0086551
rosa_laevigata RLG00000015766
rosa_multiflora Rmu_sc0008445.1_g000002 Rmu_ssc0000449.1_g000001
rosa_roxburghii Rroxscaffold_2G00154450
rosa_rugosa Rorug01G0467800
rosa_samantha Rh2AG018800 Rh2BG018400 Rh2CG019300 Rh2DG020100
rosa_wichuraiana Rw2G001580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2261
AccB1I GGYRCC 1 cut(s) 2261
AccBSI CCGCTC 1 cut(s) 170
AccI GTMKAC 1 cut(s) 2217
AccIII TCCGGA 1 cut(s) 1439
AciI CCGC 6 cut(s) 66, 135, 168, 273, 1038, 1784
AclWI GGATC 9 cut(s) 268, 840, 853, 1480, 1894, 1966, 2020, 2125, 2155
AcsI RAATTY 8 cut(s) 107, 302, 405, 455, 953, 1199, 1238, 2006
AcuI CTGAAG 2 cut(s) 693, 1034
AcyI GRCGYC 1 cut(s) 1691
AfaI GTAC 3 cut(s) 1070, 1869, 2263
AfiI CCNNNNNNNGG 2 cut(s) 279, 636
AflII CTTAAG 1 cut(s) 943
AgsI TTSAA 5 cut(s) 302, 477, 554, 1553, 2180
AjnI CCWGG 3 cut(s) 1255, 1422, 1603
AjuI GAANNNNNNNTTGG 2 cut(s) 1545, 1577
AluBI AGCT 8 cut(s) 233, 413, 498, 813, 996, 1226, 1558, 1568
AluI AGCT 8 cut(s) 233, 413, 498, 813, 996, 1226, 1558, 1568
Alw26I GTCTC 2 cut(s) 1013, 1605
AlwI GGATC 9 cut(s) 268, 840, 853, 1480, 1894, 1966, 2020, 2125, 2155
AlwNI CAGNNNCTG 2 cut(s) 236, 1787
Ama87I CYCGRG 2 cut(s) 255, 1410
Aor13HI TCCGGA 1 cut(s) 1439
AoxI GGCC 4 cut(s) 1214, 1450, 1622, 1979
ApeKI GCWGC 7 cut(s) 45, 63, 230, 1315, 1835, 1955, 2228
ApoI RAATTY 8 cut(s) 107, 302, 405, 455, 953, 1199, 1238, 2006
Asp700I GAANNNNTTC 1 cut(s) 1174
Asp718I GGTACC 1 cut(s) 2261
AspLEI GCGC 1 cut(s) 1320
AspS9I GGNCC 2 cut(s) 421, 1084
AsuC2I CCSGG 3 cut(s) 1411, 1412, 2063
AsuHPI GGTGA 1 cut(s) 503
AsuII TTCGAA 1 cut(s) 2124
AvaI CYCGRG 2 cut(s) 255, 1410
AvaII GGWCC 2 cut(s) 421, 1084
AxyI CCTNAGG 2 cut(s) 1454, 2266
BaeI ACNNNNGTAYC 2 cut(s) 1734, 1767
BamHI GGATCC 1 cut(s) 845
BanI GGYRCC 1 cut(s) 2261
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 2 cut(s) 31, 867
BbvCI CCTCAGC 1 cut(s) 1788
BbvI GCAGC 7 cut(s) 57, 75, 242, 1302, 1822, 1942, 2215
BccI CCATC 8 cut(s) 629, 634, 661, 1282, 1534, 1934, 1970, 2152
BceAI ACGGC 1 cut(s) 1994
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 3 cut(s) 1257, 1424, 1605
BciVI GTATCC 3 cut(s) 391, 1156, 1904
BcnI CCSGG 3 cut(s) 1411, 1412, 2063
BcoDI GTCTC 2 cut(s) 1013, 1605
BfaI CTAG 2 cut(s) 512, 1062
BfmI CTRYAG 5 cut(s) 219, 276, 1137, 1218, 2229
BfrI CTTAAG 1 cut(s) 943
BfuI GTATCC 3 cut(s) 391, 1156, 1904
BglII AGATCT 1 cut(s) 2075
BisI GCNGC 9 cut(s) 46, 64, 136, 231, 1316, 1785, 1836, 1956, 2229
BlpI GCTNAGC 1 cut(s) 171
BlsI GCNGC 9 cut(s) 47, 65, 137, 232, 1317, 1786, 1837, 1957, 2230
Bme1390I CCNGG 6 cut(s) 1257, 1411, 1412, 1424, 1605, 2063
Bme18I GGWCC 2 cut(s) 421, 1084
BmeT110I CYCGRG 2 cut(s) 255, 1410
BmgT120I GGNCC 2 cut(s) 421, 1084
BmiI GGNNCC 4 cut(s) 284, 422, 847, 2263
BmrFI CCNGG 6 cut(s) 1257, 1411, 1412, 1424, 1605, 2063
BmrI ACTGGG 2 cut(s) 2024, 2042
BmsI GCATC 8 cut(s) 89, 334, 616, 1045, 1067, 1363, 1491, 1570
BmuI ACTGGG 2 cut(s) 2024, 2042
BpiI GAAGAC 2 cut(s) 31, 867
BplI GAGNNNNNCTC 2 cut(s) 108, 140
BpmI CTGGAG 2 cut(s) 27, 852
Bpu10I CCTNAGC 3 cut(s) 814, 1788, 1930
Bpu1102I GCTNAGC 1 cut(s) 171
Bpu14I TTCGAA 1 cut(s) 2124
BpuEI CTTGAG 3 cut(s) 551, 1228, 1355
BpuMI CCSGG 3 cut(s) 1411, 1412, 2063
BsaBI GATNNNNATC 1 cut(s) 2146
BsaHI GRCGYC 1 cut(s) 1691
BsaJI CCNNGG 6 cut(s) 1256, 1321, 1410, 1422, 1468, 1625
BsaWI WCCGGW 2 cut(s) 1439, 1660
BsaXI ACNNNNNCTCC 2 cut(s) 52, 82
Bsc4I CCNNNNNNNGG 2 cut(s) 279, 636
Bse1I ACTGG 5 cut(s) 1087, 1522, 1748, 2030, 2048
Bse21I CCTNAGG 2 cut(s) 1454, 2266
Bse8I GATNNNNATC 1 cut(s) 2146
BseAI TCCGGA 1 cut(s) 1439
BseBI CCWGG 3 cut(s) 1257, 1424, 1605
BseDI CCNNGG 6 cut(s) 1256, 1321, 1410, 1422, 1468, 1625
BseGI GGATG 5 cut(s) 631, 645, 982, 1060, 1585
BseJI GATNNNNATC 1 cut(s) 2146
BseLI CCNNNNNNNGG 2 cut(s) 279, 636
BseNI ACTGG 5 cut(s) 1087, 1522, 1748, 2030, 2048
BseRI GAGGAG 2 cut(s) 129, 1471
BseXI GCAGC 7 cut(s) 57, 75, 242, 1302, 1822, 1942, 2215
BsgI GTGCAG 1 cut(s) 1941
BshFI GGCC 4 cut(s) 1216, 1452, 1624, 1981
BshNI GGYRCC 1 cut(s) 2261
BsiHKCI CYCGRG 2 cut(s) 255, 1410
BsiSI CCGG 5 cut(s) 983, 1411, 1440, 1661, 2063
BslFI GGGAC 2 cut(s) 434, 1273
BslI CCNNNNNNNGG 2 cut(s) 279, 636
BsmAI GTCTC 2 cut(s) 1013, 1605
BsmFI GGGAC 2 cut(s) 434, 1273
BsmI GAATGC 2 cut(s) 1317, 1405
BsnI GGCC 4 cut(s) 1216, 1452, 1624, 1981
BsoBI CYCGRG 2 cut(s) 255, 1410
Bsp119I TTCGAA 1 cut(s) 2124
Bsp13I TCCGGA 1 cut(s) 1439
Bsp1720I GCTNAGC 1 cut(s) 171
BspACI CCGC 6 cut(s) 66, 135, 168, 273, 1038, 1784
BspANI GGCC 4 cut(s) 1216, 1452, 1624, 1981
BspEI TCCGGA 1 cut(s) 1439
BspLI GGNNCC 4 cut(s) 284, 422, 847, 2263
BspMAI CTGCAG 2 cut(s) 1222, 2233
BspPI GGATC 9 cut(s) 268, 840, 853, 1480, 1894, 1966, 2020, 2125, 2155
BspQI GCTCTTC 4 cut(s) 70, 570, 826, 1053
BspT104I TTCGAA 1 cut(s) 2124
BspT107I GGYRCC 1 cut(s) 2261
BspTI CTTAAG 1 cut(s) 943
BsrBI CCGCTC 1 cut(s) 170
BsrI ACTGG 5 cut(s) 1087, 1522, 1748, 2030, 2048
BssECI CCNNGG 6 cut(s) 1256, 1321, 1410, 1422, 1468, 1625
BssNI GRCGYC 1 cut(s) 1691
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 3 cut(s) 1321, 1468, 1625
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 3 cut(s) 1257, 1424, 1605
Bst4CI ACNGT 6 cut(s) 435, 473, 801, 1073, 1498, 1801
Bst6I CTCTTC 6 cut(s) 70, 570, 669, 826, 1053, 1478
BstACI GRCGYC 1 cut(s) 1691
BstAFI CTTAAG 1 cut(s) 943
BstBI TTCGAA 1 cut(s) 2124
BstC8I GCNNGC 3 cut(s) 1218, 1523, 1899
BstF5I GGATG 5 cut(s) 631, 645, 982, 1060, 1585
BstHHI GCGC 1 cut(s) 1320
BstMAI GTCTC 2 cut(s) 1013, 1605
BstMWI GCNNNNNNNGC 2 cut(s) 42, 230
BstNI CCWGG 3 cut(s) 1257, 1424, 1605
BstNSI RCATGY 2 cut(s) 1124, 1525
BstSCI CCNGG 6 cut(s) 1255, 1409, 1410, 1422, 1603, 2061
BstSFI CTRYAG 5 cut(s) 219, 276, 1137, 1218, 2229
BstV1I GCAGC 7 cut(s) 57, 75, 242, 1302, 1822, 1942, 2215
BstV2I GAAGAC 2 cut(s) 31, 867
BstX2I RGATCY 6 cut(s) 260, 845, 1472, 2025, 2075, 2117
BstXI CCANNNNNNTGG 2 cut(s) 958, 1475
BstYI RGATCY 6 cut(s) 260, 845, 1472, 2025, 2075, 2117
Bsu36I CCTNAGG 2 cut(s) 1454, 2266
BsuI GTATCC 3 cut(s) 391, 1156, 1904
BsuRI GGCC 4 cut(s) 1216, 1452, 1624, 1981
BtgZI GCGATG 1 cut(s) 672
BtsCI GGATG 5 cut(s) 631, 645, 982, 1060, 1585
BtsI GCAGTG 1 cut(s) 1723
BtsIMutI CAGTG 4 cut(s) 797, 1503, 1515, 1723
Cac8I GCNNGC 3 cut(s) 1218, 1523, 1899
CaiI CAGNNNCTG 2 cut(s) 236, 1787
CfoI GCGC 1 cut(s) 1320
Cfr13I GGNCC 2 cut(s) 421, 1084
Cfr9I CCCGGG 1 cut(s) 1410
CseI GACGC 1 cut(s) 1699
Csp6I GTAC 3 cut(s) 1069, 1868, 2262
CspCI CAANNNNNGTGG 2 cut(s) 2002, 2037
CviAII CATG 8 cut(s) 369, 416, 591, 736, 1121, 1522, 1573, 2185
CviQI GTAC 3 cut(s) 1069, 1868, 2262
Eam1104I CTCTTC 6 cut(s) 70, 570, 669, 826, 1053, 1478
EarI CTCTTC 6 cut(s) 70, 570, 669, 826, 1053, 1478
EciI GGCGGA 1 cut(s) 1053
Eco130I CCWWGG 3 cut(s) 1321, 1468, 1625
Eco47I GGWCC 2 cut(s) 421, 1084
Eco57I CTGAAG 2 cut(s) 693, 1034
Eco81I CCTNAGG 2 cut(s) 1454, 2266
Eco88I CYCGRG 2 cut(s) 255, 1410
EcoRI GAATTC 1 cut(s) 2006
EcoRII CCWGG 3 cut(s) 1255, 1422, 1603
EcoT14I CCWWGG 3 cut(s) 1321, 1468, 1625
EcoT22I ATGCAT 2 cut(s) 1060, 1407
ErhI CCWWGG 3 cut(s) 1321, 1468, 1625
FaeI CATG 8 cut(s) 372, 419, 594, 739, 1124, 1525, 1576, 2188
FaqI GGGAC 2 cut(s) 434, 1273
FatI CATG 8 cut(s) 368, 415, 590, 735, 1120, 1521, 1572, 2184
FauNDI CATATG 2 cut(s) 621, 1735
FblI GTMKAC 1 cut(s) 2217
Fnu4HI GCNGC 9 cut(s) 46, 64, 136, 231, 1316, 1785, 1836, 1956, 2229
FokI GGATG 5 cut(s) 638, 652, 989, 1067, 1592
Fsp4HI GCNGC 9 cut(s) 46, 64, 136, 231, 1316, 1785, 1836, 1956, 2229
FspBI CTAG 2 cut(s) 512, 1062
GlaI GCGC 1 cut(s) 1319
GluI GCNGC 9 cut(s) 46, 64, 136, 231, 1316, 1785, 1836, 1956, 2229
GsuI CTGGAG 2 cut(s) 27, 852
HaeIII GGCC 4 cut(s) 1216, 1452, 1624, 1981
HapII CCGG 5 cut(s) 983, 1411, 1440, 1661, 2063
HgaI GACGC 1 cut(s) 1699
HhaI GCGC 1 cut(s) 1320
Hin1I GRCGYC 1 cut(s) 1691
Hin1II CATG 8 cut(s) 372, 419, 594, 739, 1124, 1525, 1576, 2188
Hin6I GCGC 1 cut(s) 1318
HinP1I GCGC 1 cut(s) 1318
HincII GTYRAC 2 cut(s) 1804, 1845
HindII GTYRAC 2 cut(s) 1804, 1845
HpaII CCGG 5 cut(s) 983, 1411, 1440, 1661, 2063
HphI GGTGA 1 cut(s) 503
Hpy166II GTNNAC 4 cut(s) 1804, 1845, 1870, 2218
Hpy188III TCNNGA 7 cut(s) 308, 831, 1052, 1245, 1334, 1440, 1550
Hpy8I GTNNAC 4 cut(s) 1804, 1845, 1870, 2218
Hpy99I CGWCG 2 cut(s) 94, 97
HpyAV CCTTC 6 cut(s) 303, 800, 1000, 1075, 1913, 2174
HpyCH4III ACNGT 6 cut(s) 435, 473, 801, 1073, 1498, 1801
HpyCH4IV ACGT 2 cut(s) 1700, 1711
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 230
HpySE526I ACGT 2 cut(s) 1700, 1711
Hsp92I GRCGYC 1 cut(s) 1691
Hsp92II CATG 8 cut(s) 372, 419, 594, 739, 1124, 1525, 1576, 2188
HspAI GCGC 1 cut(s) 1318
Kpn2I TCCGGA 1 cut(s) 1439
KpnI GGTACC 1 cut(s) 2265
LguI GCTCTTC 4 cut(s) 70, 570, 826, 1053
LmnI GCTCC 3 cut(s) 60, 1357, 1565
Lsp1109I GCAGC 7 cut(s) 57, 75, 242, 1302, 1822, 1942, 2215
LweI GCATC 8 cut(s) 89, 334, 616, 1045, 1067, 1363, 1491, 1570
MaeI CTAG 2 cut(s) 512, 1062
MaeII ACGT 2 cut(s) 1700, 1711
MaeIII GTNAC 6 cut(s) 268, 795, 932, 1089, 1108, 1492
MbiI CCGCTC 1 cut(s) 170
MfeI CAATTG 1 cut(s) 726
MflI RGATCY 6 cut(s) 260, 845, 1472, 2025, 2075, 2117
MlyI GAGTC 4 cut(s) 374, 803, 1799, 1850
MmeI TCCRAC 2 cut(s) 1999, 2095
Mph1103I ATGCAT 2 cut(s) 1060, 1407
MroI TCCGGA 1 cut(s) 1439
MroXI GAANNNNTTC 1 cut(s) 1174
MseI TTAA 6 cut(s) 53, 597, 944, 1653, 1796, 2272
MslI CAYNNNNRTG 3 cut(s) 624, 1520, 1967
MspA1I CMGCKG 2 cut(s) 66, 1784
MspCI CTTAAG 1 cut(s) 943
MspI CCGG 5 cut(s) 983, 1411, 1440, 1661, 2063
MspR9I CCNGG 6 cut(s) 1257, 1411, 1412, 1424, 1605, 2063
MunI CAATTG 1 cut(s) 726
Mva1269I GAATGC 2 cut(s) 1317, 1405
MvaI CCWGG 3 cut(s) 1257, 1424, 1605
MwoI GCNNNNNNNGC 2 cut(s) 42, 230
NciI CCSGG 3 cut(s) 1411, 1412, 2063
NdeI CATATG 2 cut(s) 621, 1735
NlaIII CATG 8 cut(s) 372, 419, 594, 739, 1124, 1525, 1576, 2188
NlaIV GGNNCC 4 cut(s) 284, 422, 847, 2263
NmuCI GTSAC 4 cut(s) 795, 1089, 1108, 1492
NsiI ATGCAT 2 cut(s) 1060, 1407
NspI RCATGY 2 cut(s) 1124, 1525
NspV TTCGAA 1 cut(s) 2124
PaeI GCATGC 1 cut(s) 1525
PciSI GCTCTTC 4 cut(s) 70, 570, 826, 1053
PcsI WCGNNNNNNNCGW 2 cut(s) 89, 1697
PctI GAATGC 2 cut(s) 1317, 1405
PdmI GAANNNNTTC 1 cut(s) 1174
PfeI GAWTC 7 cut(s) 251, 557, 587, 878, 1664, 1730, 2201
PflFI GACNNNGTC 1 cut(s) 1545
PkrI GCNGC 9 cut(s) 47, 65, 137, 232, 1317, 1786, 1837, 1957, 2230
PleI GAGTC 4 cut(s) 373, 802, 1799, 1849
PpsI GAGTC 4 cut(s) 373, 802, 1799, 1849
Psp6I CCWGG 3 cut(s) 1255, 1422, 1603
PspGI CCWGG 3 cut(s) 1255, 1422, 1603
PspN4I GGNNCC 4 cut(s) 284, 422, 847, 2263
PspPI GGNCC 2 cut(s) 421, 1084
PstI CTGCAG 2 cut(s) 1222, 2233
PstNI CAGNNNCTG 2 cut(s) 236, 1787
PsuI RGATCY 6 cut(s) 260, 845, 1472, 2025, 2075, 2117
PsyI GACNNNGTC 1 cut(s) 1545
RsaI GTAC 3 cut(s) 1070, 1869, 2263
RsaNI GTAC 3 cut(s) 1069, 1868, 2262
RseI CAYNNNNRTG 3 cut(s) 624, 1520, 1967
SapI GCTCTTC 4 cut(s) 70, 570, 826, 1053
SaqAI TTAA 6 cut(s) 53, 597, 944, 1653, 1796, 2272
SatI GCNGC 9 cut(s) 46, 64, 136, 231, 1316, 1785, 1836, 1956, 2229
Sau96I GGNCC 2 cut(s) 421, 1084
SchI GAGTC 4 cut(s) 374, 803, 1799, 1850
ScrFI CCNGG 6 cut(s) 1257, 1411, 1412, 1424, 1605, 2063
SfaNI GCATC 8 cut(s) 89, 334, 616, 1045, 1067, 1363, 1491, 1570
SfcI CTRYAG 5 cut(s) 219, 276, 1137, 1218, 2229
SfuI TTCGAA 1 cut(s) 2124
SinI GGWCC 2 cut(s) 421, 1084
SmaI CCCGGG 1 cut(s) 1412
SmiMI CAYNNNNRTG 3 cut(s) 624, 1520, 1967
SmlI CTYRAG 4 cut(s) 530, 943, 1243, 1334
SmoI CTYRAG 4 cut(s) 530, 943, 1243, 1334
SphI GCATGC 1 cut(s) 1525
SsiI CCGC 6 cut(s) 66, 135, 168, 273, 1038, 1784
SspMI CTAG 2 cut(s) 512, 1062
StyD4I CCNGG 6 cut(s) 1255, 1409, 1410, 1422, 1603, 2061
StyI CCWWGG 3 cut(s) 1321, 1468, 1625
TaaI ACNGT 6 cut(s) 435, 473, 801, 1073, 1498, 1801
TaiI ACGT 2 cut(s) 1703, 1714
TaqI TCGA 7 cut(s) 112, 194, 242, 1965, 2124, 2150, 2249
TaqII GACCGA 1 cut(s) 1116
TauI GCSGC 2 cut(s) 138, 1787
TfiI GAWTC 7 cut(s) 251, 557, 587, 878, 1664, 1730, 2201
Tru1I TTAA 6 cut(s) 53, 597, 944, 1653, 1796, 2272
Tru9I TTAA 6 cut(s) 53, 597, 944, 1653, 1796, 2272
TscAI CASTG 4 cut(s) 804, 1503, 1522, 1723
TseFI GTSAC 4 cut(s) 795, 1089, 1108, 1492
TseI GCWGC 7 cut(s) 45, 63, 230, 1315, 1835, 1955, 2228
Tsp45I GTSAC 4 cut(s) 795, 1089, 1108, 1492
TspDTI ATGAA 7 cut(s) 462, 540, 579, 780, 798, 819, 1722
TspMI CCCGGG 1 cut(s) 1410
TspRI CASTG 4 cut(s) 804, 1503, 1522, 1723
Tth111I GACNNNGTC 1 cut(s) 1545
Vha464I CTTAAG 1 cut(s) 943
VpaK11BI GGWCC 2 cut(s) 421, 1084
XapI RAATTY 8 cut(s) 107, 302, 405, 455, 953, 1199, 1238, 2006
XceI RCATGY 2 cut(s) 1124, 1525
XcmI CCANNNNNNNNNTGG 2 cut(s) 637, 958
XmaI CCCGGG 1 cut(s) 1410
XmiI GTMKAC 1 cut(s) 2217
XmnI GAANNNNTTC 1 cut(s) 1174
XspI CTAG 2 cut(s) 512, 1062
Zsp2I ATGCAT 2 cut(s) 1060, 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.