pycom15g14220

G-patch domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012311
Physical Location & Seq
Reverse (-)
9678469 .. 9683144
4676 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14220.3

Sequence Viewer

Length: 2238 bp
ATGGCTGGAGGCAGAGGAAGAAGAAGACCCAACAGCAACGACAGCAGCAACTTAAATTGGAGCAGCGGTAGGAGAAGAGCATCGCCATCGTCGTCGTCAAAATCCAAATTTCGAGGAGGTCTGCTCGTGGAGGGCGGGAAAAATCCGAGTTCGAGCAACAAATCTGCGACGAAATCTGTAGCAAAAGCAGCTTCTGGGTCGAAAAGTGATTCTCGGAGATCTAATGTTACTGCTATAGGGTACCAATACCCTTCTGTTGAATTTCAGGAGGGTTTCTATTCAGAATTACGCAATGGCGGTGATGCAGGCAAAGATATGTATGAGTCGTGCCCCTTGGTTTTAGCTGATTACAAGGATACCCAAATTTTAGCTCATGGGGACCAAACACAACCGTCAAGCCCCAATGAAGTGGAATTTACTTATCACTACGGTTCAAGTTTTGTGTTAGGTGAAAGCTCTCATAGAGGGCTAGGGTTCTCTGATGAACTTGAGGAAACCCCAAGTGATGTTGAAGATTCCTCAAAGCAAATGGAAGAGCCAGAAGATTCATGTTTTAACTTGCAATCTTCTGAGAAACATATGGATGCCAATAACGGGATGGATTGTGAAGTTGGCGATGATGAGATGGCTGAAGAGATGACAACAGAGATGTTGTCGCCCAAGAAGAACTCAGGCTTTTTGTCAGTTGGTGGCATGAGATTATACACCCAAGATATTTCTGATGAAGAAAGTGAAGAAGATGAAAATGGAGAGTCACTGTATGAAGGAAGCTCAGGCTCTTCTGAGTCTGGAGAACGACTTGGATCCTCTGAAAGTGAAGACTCTGAAGACTTGTCTGATAGTGATTCAGATGTAGATGACGAGGTTGCAGACGATTATTTAGTGGGAATTGGTGGTAGTTACAACATCTTAAGTTCCAAATTTTTGGTAGAACAGGATTTGGATGAGCCGGATAAGAATAGCTCTTTGAGGAAGGGTTTTGATGAGACTTTGCAGAAGTTGGGCGGAATTGCTCTTCAGGATGCATCTAGGGAGTATGGTAGGAAGAAGGTCCAGTCACAAAAGAAATACAATGTGACTGAAAGACATGCTCGGTCTTTGGCTATAGATGACCTAATGCTTGTAAAGGATACAAGAAATTATTCCAAAAAGAAACCTGTTGCCAAGTTTCCTCAGTCTTGGCCTGCAGAAGCTCAAAGGAGTAAATTCTCAAGACATTTTCCTGGGACAAAAAAGAAACATCGTAAAGAAATGATGGCTGTAAAGCGTAAGGAGAGAATGCTGCGCCGAGGCGTTGATCTTGAGCAAATAAATCTGAAAATGGAGCAAATTGTTTTGGATGGAGTAGATATGTTTTCTTTTCAGCCTATGCATTCCCGGGATTGTTCCCAGGTTCAGCGATTAGCCGCAATGTATCGCCTGAGGAGTTCCTGCCAAGGATCTGGCAAGAAGAGATTTGTGACAGTGATGCAGACACAACACACTGGCATGCCATCTGCAAGTGATAGACTTCGTCTTGAAAAGCTGATTGGAGCTGACATGGAGGATGCTGATTTCTCTGTTGTTGAGCCTGGTAGAGACAAAAACAGGCCAAGGAACATTGGAAAAGGAATTGATTTTAGGACACCGGAATCTAAACAATCCAGCCAAAGAAAGACACCGAAGACCTCAGCCAAACATGGCAGTGGGAATATGGATTCATATGCTAATACACCAGTATCATTTGTGTCAAGTGGCGTAATGCAATCAGCGGCTGAGAGTTTAACTGTTGACTCAATAGAAGCAAGTAAAAACAAGGTTGCTGCTGAGTCAACTGAATATCGTTCCTTTGAGCTACACACTAAGGGTTTTGGATCAAAAATGCTGGCTAAAATGGGATACATCGAAGGTGGCTTAGGAAAAGATGGACAAGGTATGGCTGCACCCATCGAAGTGATCCAACGGCCTAAATCACTTGGCTTGGGTGTGGAATTCTCCACCCCCGTTGAGATCCCAGTCGGTAAAACACCCCCAGCAAAGAATATCCCGGTAAAAAGAGGATCTCAGGCTCAGAGTTCTCAAACTCAGAGTGAAAGAGTTGGATATTTCGAAAAGCATACCAAAGGATTTGGATCGAAGATGATGGCGAAAATGGGTTTTGTTGAAGGCATGGGGTTGGGGAAAGATTCACAAGGCATTGTCAACCCTCTGGCTGCAGTCAGGCTACCGAAGTCGAGGGGATTAGGTGCCTCAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-patch R3H

Protein Analysis

746

Amino Acids

81.56

Weight (kDa)

6.28

Isoelectric Point (pI)

60.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012311)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09850
fragaria_vesca FvH4_1g01590
malus_domestica MD02G1012700.v1.1 MD15G1158500.v1.1
prunus_persica Prupe.7G253700_v2.0.a1 Prupe.7G253700_v2.0.a1
pyrus_communis pycom02g01190 pycom15g14220
rosa_chinensis RchiOBHm_Chr2g0086551
rosa_laevigata RLG00000015766
rosa_multiflora Rmu_sc0008445.1_g000002 Rmu_ssc0000449.1_g000001
rosa_roxburghii Rroxscaffold_2G00154450
rosa_rugosa Rorug01G0467800
rosa_samantha Rh2AG018800 Rh2BG018400 Rh2CG019300 Rh2DG020100
rosa_wichuraiana Rw2G001580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 240
AccB1I GGYRCC 2 cut(s) 240, 2225
AciI CCGC 6 cut(s) 66, 135, 297, 1005, 1407, 1751
AclWI GGATC 8 cut(s) 798, 811, 1447, 1861, 1930, 1984, 2047, 2119
AcsI RAATTY 7 cut(s) 107, 260, 363, 413, 920, 1205, 1970
AcuI CTGAAG 3 cut(s) 651, 846, 1001
AfaI GTAC 1 cut(s) 242
AfiI CCNNNNNNNGG 1 cut(s) 594
AflII CTTAAG 1 cut(s) 910
AgsI TTSAA 5 cut(s) 260, 435, 512, 1520, 2144
AjnI CCWGG 3 cut(s) 1222, 1389, 1570
AjuI GAANNNNNNNTTGG 2 cut(s) 1512, 1544
Alw26I GTCTC 2 cut(s) 980, 1572
AlwI GGATC 8 cut(s) 798, 811, 1447, 1861, 1930, 1984, 2047, 2119
AlwNI CAGNNNCTG 2 cut(s) 194, 1754
Ama87I CYCGRG 1 cut(s) 1377
AoxI GGCC 3 cut(s) 1181, 1589, 1943
ApeKI GCWGC 7 cut(s) 45, 63, 188, 1282, 1802, 1919, 2192
ApoI RAATTY 7 cut(s) 107, 260, 363, 413, 920, 1205, 1970
Asp700I GAANNNNTTC 1 cut(s) 1141
Asp718I GGTACC 1 cut(s) 240
AspLEI GCGC 1 cut(s) 1287
AspS9I GGNCC 2 cut(s) 379, 1051
AsuC2I CCSGG 3 cut(s) 1378, 1379, 2027
AsuHPI GGTGA 2 cut(s) 311, 461
AsuII TTCGAA 1 cut(s) 2088
AvaI CYCGRG 1 cut(s) 1377
AvaII GGWCC 2 cut(s) 379, 1051
AxyI CCTNAGG 2 cut(s) 1421, 2230
BaeGI GKGCMC 1 cut(s) 332
BaeI ACNNNNGTAYC 2 cut(s) 1701, 1734
BamHI GGATCC 1 cut(s) 803
BanI GGYRCC 2 cut(s) 240, 2225
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 4 cut(s) 31, 825, 834, 1670
BbvCI CCTCAGC 1 cut(s) 1669
BbvI GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
BccI CCATC 9 cut(s) 94, 592, 619, 1249, 1334, 1501, 1898, 1934, 2116
BceAI ACGGC 1 cut(s) 1958
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 3 cut(s) 1224, 1391, 1572
BciVI GTATCC 3 cut(s) 349, 1123, 1871
BcnI CCSGG 3 cut(s) 1378, 1379, 2027
BcoDI GTCTC 2 cut(s) 980, 1572
BfaI CTAG 2 cut(s) 470, 1029
BfmI CTRYAG 5 cut(s) 177, 234, 1104, 1185, 2193
BfrI CTTAAG 1 cut(s) 910
BfuI GTATCC 3 cut(s) 349, 1123, 1871
BglII AGATCT 1 cut(s) 218
BisI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
BlsI GCNGC 9 cut(s) 47, 65, 190, 1284, 1408, 1753, 1804, 1921, 2194
Bme1390I CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
Bme18I GGWCC 2 cut(s) 379, 1051
BmeT110I CYCGRG 1 cut(s) 1377
BmgT120I GGNCC 2 cut(s) 379, 1051
BmiI GGNNCC 4 cut(s) 242, 380, 805, 2227
BmrFI CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
BmrI ACTGGG 1 cut(s) 1988
BmsI GCATC 7 cut(s) 89, 292, 574, 1012, 1034, 1458, 1537
BmuI ACTGGG 1 cut(s) 1988
BpiI GAAGAC 4 cut(s) 31, 825, 834, 1670
BplI GAGNNNNNCTC 2 cut(s) 108, 140
BpmI CTGGAG 2 cut(s) 27, 810
Bpu10I CCTNAGC 3 cut(s) 772, 1669, 1894
Bpu14I TTCGAA 1 cut(s) 2088
BpuEI CTTGAG 3 cut(s) 509, 1195, 1322
BpuMI CCSGG 3 cut(s) 1378, 1379, 2027
BsaBI GATNNNNATC 1 cut(s) 2110
BsaJI CCNNGG 7 cut(s) 333, 1223, 1288, 1377, 1389, 1435, 1592
BsaWI WCCGGW 1 cut(s) 1627
BsaXI ACNNNNNCTCC 2 cut(s) 52, 82
Bsc4I CCNNNNNNNGG 1 cut(s) 594
Bse1I ACTGG 4 cut(s) 1054, 1489, 1715, 1994
Bse21I CCTNAGG 2 cut(s) 1421, 2230
Bse3DI GCAATG 2 cut(s) 298, 1416
Bse8I GATNNNNATC 1 cut(s) 2110
BseBI CCWGG 3 cut(s) 1224, 1391, 1572
BseDI CCNNGG 7 cut(s) 333, 1223, 1288, 1377, 1389, 1435, 1592
BseGI GGATG 6 cut(s) 589, 603, 949, 1027, 1345, 1552
BseJI GATNNNNATC 1 cut(s) 2110
BseLI CCNNNNNNNGG 1 cut(s) 594
BseMI GCAATG 2 cut(s) 298, 1416
BseNI ACTGG 4 cut(s) 1054, 1489, 1715, 1994
BseRI GAGGAG 2 cut(s) 129, 1438
BseSI GKGCMC 1 cut(s) 332
BseXI GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
BseYI CCCAGC 1 cut(s) 2011
BsgI GTGCAG 1 cut(s) 1905
BshFI GGCC 3 cut(s) 1183, 1591, 1945
BshNI GGYRCC 2 cut(s) 240, 2225
BsiHKCI CYCGRG 1 cut(s) 1377
BsiSI CCGG 4 cut(s) 950, 1378, 1628, 2027
BslFI GGGAC 2 cut(s) 392, 1240
BslI CCNNNNNNNGG 1 cut(s) 594
BsmAI GTCTC 2 cut(s) 980, 1572
BsmFI GGGAC 2 cut(s) 392, 1240
BsmI GAATGC 2 cut(s) 1284, 1372
BsnI GGCC 3 cut(s) 1183, 1591, 1945
BsoBI CYCGRG 1 cut(s) 1377
Bsp119I TTCGAA 1 cut(s) 2088
Bsp1286I GDGCHC 1 cut(s) 332
Bsp143I GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
BspACI CCGC 6 cut(s) 66, 135, 297, 1005, 1407, 1751
BspANI GGCC 3 cut(s) 1183, 1591, 1945
BspLI GGNNCC 4 cut(s) 242, 380, 805, 2227
BspMAI CTGCAG 2 cut(s) 1189, 2197
BspPI GGATC 8 cut(s) 798, 811, 1447, 1861, 1930, 1984, 2047, 2119
BspQI GCTCTTC 4 cut(s) 70, 528, 784, 1020
BspT104I TTCGAA 1 cut(s) 2088
BspT107I GGYRCC 2 cut(s) 240, 2225
BspTI CTTAAG 1 cut(s) 910
BsrDI GCAATG 2 cut(s) 298, 1416
BsrI ACTGG 4 cut(s) 1054, 1489, 1715, 1994
BssECI CCNNGG 7 cut(s) 333, 1223, 1288, 1377, 1389, 1435, 1592
BssMI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 3 cut(s) 333, 1435, 1592
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 3 cut(s) 1224, 1391, 1572
Bst4CI ACNGT 5 cut(s) 393, 431, 759, 1465, 1768
Bst6I CTCTTC 6 cut(s) 70, 528, 627, 784, 1020, 1445
BstAFI CTTAAG 1 cut(s) 910
BstBI TTCGAA 1 cut(s) 2088
BstC8I GCNNGC 4 cut(s) 307, 1185, 1490, 1866
BstF5I GGATG 6 cut(s) 589, 603, 949, 1027, 1345, 1552
BstHHI GCGC 1 cut(s) 1287
BstKTI GATC 9 cut(s) 221, 806, 1300, 1442, 1856, 1938, 1992, 2042, 2114
BstMAI GTCTC 2 cut(s) 980, 1572
BstMBI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
BstMWI GCNNNNNNNGC 2 cut(s) 42, 188
BstNI CCWGG 3 cut(s) 1224, 1391, 1572
BstNSI RCATGY 2 cut(s) 1091, 1492
BstSCI CCNGG 6 cut(s) 1222, 1376, 1377, 1389, 1570, 2025
BstSFI CTRYAG 5 cut(s) 177, 234, 1104, 1185, 2193
BstSLI GKGCMC 1 cut(s) 332
BstV1I GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
BstV2I GAAGAC 4 cut(s) 31, 825, 834, 1670
BstX2I RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
BstXI CCANNNNNNTGG 3 cut(s) 409, 925, 1442
BstYI RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
Bsu36I CCTNAGG 2 cut(s) 1421, 2230
BsuI GTATCC 3 cut(s) 349, 1123, 1871
BsuRI GGCC 3 cut(s) 1183, 1591, 1945
BtgZI GCGATG 2 cut(s) 66, 630
BtsCI GGATG 6 cut(s) 589, 603, 949, 1027, 1345, 1552
BtsI GCAGTG 1 cut(s) 1690
BtsIMutI CAGTG 4 cut(s) 755, 1470, 1482, 1690
Cac8I GCNNGC 4 cut(s) 307, 1185, 1490, 1866
CaiI CAGNNNCTG 2 cut(s) 194, 1754
CfoI GCGC 1 cut(s) 1287
Cfr13I GGNCC 2 cut(s) 379, 1051
Cfr9I CCCGGG 1 cut(s) 1377
Csp6I GTAC 1 cut(s) 241
CspCI CAANNNNNGTGG 2 cut(s) 1966, 2001
CviAII CATG 8 cut(s) 374, 549, 694, 1088, 1489, 1540, 1679, 2149
CviQI GTAC 1 cut(s) 241
DpnI GATC 9 cut(s) 220, 805, 1299, 1441, 1855, 1937, 1991, 2041, 2113
DpnII GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
Eam1104I CTCTTC 6 cut(s) 70, 528, 627, 784, 1020, 1445
EarI CTCTTC 6 cut(s) 70, 528, 627, 784, 1020, 1445
EciI GGCGGA 1 cut(s) 1020
Eco130I CCWWGG 3 cut(s) 333, 1435, 1592
Eco47I GGWCC 2 cut(s) 379, 1051
Eco57I CTGAAG 3 cut(s) 651, 846, 1001
Eco81I CCTNAGG 2 cut(s) 1421, 2230
Eco88I CYCGRG 1 cut(s) 1377
EcoRI GAATTC 1 cut(s) 1970
EcoRII CCWGG 3 cut(s) 1222, 1389, 1570
EcoT14I CCWWGG 3 cut(s) 333, 1435, 1592
EcoT22I ATGCAT 2 cut(s) 1027, 1374
ErhI CCWWGG 3 cut(s) 333, 1435, 1592
FaeI CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
FaqI GGGAC 2 cut(s) 392, 1240
FatI CATG 8 cut(s) 373, 548, 693, 1087, 1488, 1539, 1678, 2148
FauI CCCGC 1 cut(s) 128
FauNDI CATATG 2 cut(s) 579, 1702
Fnu4HI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
FokI GGATG 6 cut(s) 596, 610, 956, 1034, 1352, 1559
Fsp4HI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
FspBI CTAG 2 cut(s) 470, 1029
GlaI GCGC 1 cut(s) 1286
GluI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
GsaI CCCAGC 1 cut(s) 2015
GsuI CTGGAG 2 cut(s) 27, 810
HaeIII GGCC 3 cut(s) 1183, 1591, 1945
HapII CCGG 4 cut(s) 950, 1378, 1628, 2027
HhaI GCGC 1 cut(s) 1287
Hin1II CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
Hin6I GCGC 1 cut(s) 1285
HinP1I GCGC 1 cut(s) 1285
HincII GTYRAC 3 cut(s) 1771, 1812, 2182
HindII GTYRAC 3 cut(s) 1771, 1812, 2182
HpaII CCGG 4 cut(s) 950, 1378, 1628, 2027
HphI GGTGA 2 cut(s) 311, 461
Hpy166II GTNNAC 3 cut(s) 1771, 1812, 2182
Hpy188III TCNNGA 6 cut(s) 266, 789, 1019, 1212, 1301, 1517
Hpy8I GTNNAC 3 cut(s) 1771, 1812, 2182
Hpy99I CGWCG 3 cut(s) 94, 97, 172
HpyAV CCTTC 6 cut(s) 261, 758, 967, 1042, 1880, 2138
HpyCH4III ACNGT 5 cut(s) 393, 431, 759, 1465, 1768
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 188
Hsp92II CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
HspAI GCGC 1 cut(s) 1285
KpnI GGTACC 1 cut(s) 244
Kzo9I GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
LguI GCTCTTC 4 cut(s) 70, 528, 784, 1020
LmnI GCTCC 3 cut(s) 60, 1324, 1532
Lsp1109I GCAGC 7 cut(s) 57, 75, 200, 1269, 1789, 1906, 2179
LweI GCATC 7 cut(s) 89, 292, 574, 1012, 1034, 1458, 1537
MaeI CTAG 2 cut(s) 470, 1029
MaeIII GTNAC 6 cut(s) 226, 753, 899, 1056, 1075, 1459
MalI GATC 9 cut(s) 220, 805, 1299, 1441, 1855, 1937, 1991, 2041, 2113
MboI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
MflI RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
MhlI GDGCHC 1 cut(s) 332
MlyI GAGTC 6 cut(s) 332, 761, 794, 815, 1766, 1817
MmeI TCCRAC 2 cut(s) 1963, 2059
Mph1103I ATGCAT 2 cut(s) 1027, 1374
MroXI GAANNNNTTC 1 cut(s) 1141
MseI TTAA 5 cut(s) 53, 555, 911, 1763, 2236
MslI CAYNNNNRTG 4 cut(s) 582, 1487, 1683, 1931
MspA1I CMGCKG 2 cut(s) 66, 1751
MspCI CTTAAG 1 cut(s) 910
MspI CCGG 4 cut(s) 950, 1378, 1628, 2027
MspR9I CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
Mva1269I GAATGC 2 cut(s) 1284, 1372
MvaI CCWGG 3 cut(s) 1224, 1391, 1572
MwoI GCNNNNNNNGC 2 cut(s) 42, 188
NciI CCSGG 3 cut(s) 1378, 1379, 2027
NdeI CATATG 2 cut(s) 579, 1702
NdeII GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
NlaIII CATG 8 cut(s) 377, 552, 697, 1091, 1492, 1543, 1682, 2152
NlaIV GGNNCC 4 cut(s) 242, 380, 805, 2227
NmeAIII GCCGAG 1 cut(s) 1313
NmuCI GTSAC 4 cut(s) 753, 1056, 1075, 1459
NsiI ATGCAT 2 cut(s) 1027, 1374
NspI RCATGY 2 cut(s) 1091, 1492
NspV TTCGAA 1 cut(s) 2088
PaeI GCATGC 1 cut(s) 1492
PciSI GCTCTTC 4 cut(s) 70, 528, 784, 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PctI GAATGC 2 cut(s) 1284, 1372
PdmI GAANNNNTTC 1 cut(s) 1141
PfeI GAWTC 7 cut(s) 209, 515, 545, 845, 1631, 1697, 2165
PflFI GACNNNGTC 1 cut(s) 1512
PkrI GCNGC 9 cut(s) 47, 65, 190, 1284, 1408, 1753, 1804, 1921, 2194
PleI GAGTC 6 cut(s) 331, 760, 793, 815, 1766, 1816
PpsI GAGTC 6 cut(s) 331, 760, 793, 815, 1766, 1816
Psp6I CCWGG 3 cut(s) 1222, 1389, 1570
PspFI CCCAGC 1 cut(s) 2011
PspGI CCWGG 3 cut(s) 1222, 1389, 1570
PspN4I GGNNCC 4 cut(s) 242, 380, 805, 2227
PspPI GGNCC 2 cut(s) 379, 1051
PstI CTGCAG 2 cut(s) 1189, 2197
PstNI CAGNNNCTG 2 cut(s) 194, 1754
PsuI RGATCY 5 cut(s) 218, 803, 1439, 1989, 2039
PsyI GACNNNGTC 1 cut(s) 1512
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
RseI CAYNNNNRTG 4 cut(s) 582, 1487, 1683, 1931
SapI GCTCTTC 4 cut(s) 70, 528, 784, 1020
SaqAI TTAA 5 cut(s) 53, 555, 911, 1763, 2236
SatI GCNGC 9 cut(s) 46, 64, 189, 1283, 1407, 1752, 1803, 1920, 2193
Sau3AI GATC 9 cut(s) 218, 803, 1297, 1439, 1853, 1935, 1989, 2039, 2111
Sau96I GGNCC 2 cut(s) 379, 1051
SchI GAGTC 6 cut(s) 332, 761, 794, 815, 1766, 1817
ScrFI CCNGG 6 cut(s) 1224, 1378, 1379, 1391, 1572, 2027
SduI GDGCHC 1 cut(s) 332
SfaNI GCATC 7 cut(s) 89, 292, 574, 1012, 1034, 1458, 1537
SfcI CTRYAG 5 cut(s) 177, 234, 1104, 1185, 2193
SfuI TTCGAA 1 cut(s) 2088
SinI GGWCC 2 cut(s) 379, 1051
SmaI CCCGGG 1 cut(s) 1379
SmiMI CAYNNNNRTG 4 cut(s) 582, 1487, 1683, 1931
SmlI CTYRAG 4 cut(s) 488, 910, 1210, 1301
SmoI CTYRAG 4 cut(s) 488, 910, 1210, 1301
SphI GCATGC 1 cut(s) 1492
SsiI CCGC 6 cut(s) 66, 135, 297, 1005, 1407, 1751
SspMI CTAG 2 cut(s) 470, 1029
StyD4I CCNGG 6 cut(s) 1222, 1376, 1377, 1389, 1570, 2025
StyI CCWWGG 3 cut(s) 333, 1435, 1592
TaaI ACNGT 5 cut(s) 393, 431, 759, 1465, 1768
TaqI TCGA 8 cut(s) 112, 152, 200, 1884, 1929, 2088, 2114, 2213
TaqII GACCGA 1 cut(s) 1083
TauI GCSGC 2 cut(s) 1409, 1754
TfiI GAWTC 7 cut(s) 209, 515, 545, 845, 1631, 1697, 2165
Tru1I TTAA 5 cut(s) 53, 555, 911, 1763, 2236
Tru9I TTAA 5 cut(s) 53, 555, 911, 1763, 2236
TscAI CASTG 4 cut(s) 762, 1470, 1489, 1690
TseFI GTSAC 4 cut(s) 753, 1056, 1075, 1459
TseI GCWGC 7 cut(s) 45, 63, 188, 1282, 1802, 1919, 2192
Tsp45I GTSAC 4 cut(s) 753, 1056, 1075, 1459
TspDTI ATGAA 7 cut(s) 420, 498, 537, 738, 756, 777, 1689
TspMI CCCGGG 1 cut(s) 1377
TspRI CASTG 4 cut(s) 762, 1470, 1489, 1690
Tth111I GACNNNGTC 1 cut(s) 1512
Vha464I CTTAAG 1 cut(s) 910
VpaK11BI GGWCC 2 cut(s) 379, 1051
XapI RAATTY 7 cut(s) 107, 260, 363, 413, 920, 1205, 1970
XceI RCATGY 2 cut(s) 1091, 1492
XcmI CCANNNNNNNNNTGG 1 cut(s) 595
XmaI CCCGGG 1 cut(s) 1377
XmnI GAANNNNTTC 1 cut(s) 1141
XspI CTAG 2 cut(s) 470, 1029
Zsp2I ATGCAT 2 cut(s) 1027, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.